View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11943_high_9 (Length: 409)
Name: NF11943_high_9
Description: NF11943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11943_high_9 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 12 - 349
Target Start/End: Original strand, 4579567 - 4579901
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||| ||||||| |||||||||||||||| |
|
|
| T |
4579567 |
catcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttact |
4579666 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||| || |
|
|
| T |
4579667 |
gggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccacc---aa |
4579763 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
4579764 |
ttgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgacaaaacagctgagcc |
4579863 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|| ||||||||||| | |||||||||| ||||||||| |
|
|
| T |
4579864 |
gccgatgacaagatcgggcctaatgatccacaaaaagg |
4579901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 12 - 349
Target Start/End: Complemental strand, 4613715 - 4613381
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| |||| |||||| ||||| || ||||||||||| || || ||||| || || ||||||||| |||||||||||||||||| || || |
|
|
| T |
4613715 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
4613616 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || || ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
4613615 |
ggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgcc---aa |
4613519 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||||||||| | |||||||||||| ||||| | |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4613518 |
ttgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaactgagcc |
4613419 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
4613418 |
gccaatgacaagatcaggcctaatgatccacaaaaagg |
4613381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 12 - 349
Target Start/End: Original strand, 4461258 - 4461592
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||||||||||||| |||||||||||| ||| || |||||| | ||||| ||| |||| ||| || || |
|
|
| T |
4461258 |
catcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatctacagtttgct |
4461357 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||| | || ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
4461358 |
ggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccacc---aa |
4461454 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | || | |||||||||||||| ||||||||||||||||||||| |||||||||| || ||||| |
|
|
| T |
4461455 |
ttgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcagatgacaaaataaacgagcc |
4461554 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||||||||| |||||||||| | ||||||| |
|
|
| T |
4461555 |
gccaatgacaagatcaggcctaatgatccataaaaagg |
4461592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 12 - 349
Target Start/End: Original strand, 4557260 - 4557594
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||| || ||||||||||| || || ||||| || || || |||||||| ||||| |||||||||||| || || |
|
|
| T |
4557260 |
catcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgct |
4557359 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||||| |||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4557360 |
ggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccacc---aa |
4557456 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||| ||||| | ||||||||||||| | ||| | | || ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4557457 |
ttgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccgatgacaaaacaactgagcc |
4557556 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||| ||||||||||| | |||||||||| ||||||||| |
|
|
| T |
4557557 |
accgatgacaagatcgggcctaatgatccacaaaaagg |
4557594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 4598304 - 4598640
Alignment:
| Q |
10 |
gacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctta |
109 |
Q |
| |
|
||||||||||| || |||| ||||||||||||||| |||||||||||||| || |||| ||||| || |||||| ||||| |||||||||||| | |
|
|
| T |
4598304 |
gacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttgg |
4598403 |
T |
|
| Q |
110 |
ctgggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaat |
209 |
Q |
| |
|
|| | || || |||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
4598404 |
cttgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaat |
4598503 |
T |
|
| Q |
210 |
aattgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgag |
309 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||||| | || | | || |||||||| ||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
4598504 |
---tgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgag |
4598600 |
T |
|
| Q |
310 |
ccaccaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
4598601 |
ccaccaatgacaagatcaggcctaatgatccacaaaaagg |
4598640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 12 - 348
Target Start/End: Original strand, 4571107 - 4571440
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||| ||||| || |||||||| ||||| |||||||| ||| || || |
|
|
| T |
4571107 |
catcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgct |
4571206 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||||| ||||||||| |||||||||| || |||| | | |||||||||| || ||||||||||||||||| ||||||||||| ||||| || |
|
|
| T |
4571207 |
ggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccacc---aa |
4571303 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||| ||||||| ||||| ||||||| ||| ||| | ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4571304 |
ttgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaactgagcc |
4571403 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaag |
348 |
Q |
| |
|
||||||||||||||| | |||||||||| |||||||| |
|
|
| T |
4571404 |
accaatgacaagatcgggcctaatgatccacaaaaag |
4571440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 9 - 349
Target Start/End: Original strand, 4574440 - 4574777
Alignment:
| Q |
9 |
ggacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctt |
108 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||| |||| || |||||| ||||| |||||||||||| || |
|
|
| T |
4574440 |
ggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagttt |
4574539 |
T |
|
| Q |
109 |
actgggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaa |
208 |
Q |
| |
|
|||| || || | |||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4574540 |
gctggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccacc-- |
4574637 |
T |
|
| Q |
209 |
taattgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactga |
308 |
Q |
| |
|
| |||| ||||||||| ||||| |||||| ||||| |||| | |||||| ||||||| ||||||||| |||| ||| || ||||| ||||| || || |
|
|
| T |
4574638 |
-gactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccga |
4574736 |
T |
|
| Q |
309 |
gccaccaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
4574737 |
gccaccaatgacaagatcaggcctaatgatccacaaaaagg |
4574777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 339
Target Start/End: Original strand, 4585771 - 4586095
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||| || || | ||| || || || |||||| ||||| ||| ||| ||| || | |
|
|
| T |
4585771 |
catcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgtt |
4585870 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
4585871 |
ggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccacc---aa |
4585967 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||||||||||| ||||||||||||| | ||| ||| || ||||||||||||| ||||||||||||| |||||| ||||||||||| | || || |
|
|
| T |
4585968 |
ttgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcagatgacaaaaccaaggaacc |
4586067 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatc |
339 |
Q |
| |
|
||||||||||||||||| ||||||||| |
|
|
| T |
4586068 |
accaatgacaagatcaggtctaatgatc |
4586095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 31 - 349
Target Start/End: Original strand, 4626105 - 4626420
Alignment:
| Q |
31 |
ttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggtgttcagcgaaaaatg |
130 |
Q |
| |
|
||||| ||| |||||||||||||||||| ||||||||| ||||| || |||||| ||||| |||||||| || || ||| || ||||| ||| || |
|
|
| T |
4626105 |
ttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgttggctgatcagcaaaatttg |
4626204 |
T |
|
| Q |
131 |
gccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagtac |
230 |
Q |
| |
|
||||||||| ||| || |||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |
|
|
| T |
4626205 |
gccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaat---tgaaggatggttcagtac |
4626301 |
T |
|
| Q |
231 |
ttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcagac |
330 |
Q |
| |
|
|| ||||||| ||||| | || | ||||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||| |||||||||| | |
|
|
| T |
4626302 |
tttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcggatgacgaaataaatgagccaccaatcacaagatcaggc |
4626401 |
T |
|
| Q |
331 |
ctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
4626402 |
ctaatgatccacaaaaagg |
4626420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 4563844 - 4564180
Alignment:
| Q |
10 |
gacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctta |
109 |
Q |
| |
|
|||||||||||||| || | ||||||||||| || ||||| ||||| ||||||||||| || || || |||||| ||| | ||| ||| ||| || |
|
|
| T |
4563844 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
4563943 |
T |
|
| Q |
110 |
ctgggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaat |
209 |
Q |
| |
|
||| || ||| | || ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4563944 |
ttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaat |
4564043 |
T |
|
| Q |
210 |
aattgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgag |
309 |
Q |
| |
|
|||||||||||||| ||||| ||| || ||||| |||| | |||| |||||||| ||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
4564044 |
---tgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgacaaaacgactgag |
4564140 |
T |
|
| Q |
310 |
ccaccaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||||||| |||| |||||||||| ||||||||| |
|
|
| T |
4564141 |
ccaccaatgacaaggtcaggcctaatgatccacaaaaagg |
4564180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 4601925 - 4602256
Alignment:
| Q |
13 |
atcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactg |
112 |
Q |
| |
|
|||| |||||| | || |||| ||| |||||| ||||||||||| ||||||||||| || || || |||||| || || ||| |||| ||| || || |
|
|
| T |
4601925 |
atcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttg |
4602024 |
T |
|
| Q |
113 |
ggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataat |
212 |
Q |
| |
|
| || || || ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
4602025 |
gctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgcc---gat |
4602121 |
T |
|
| Q |
213 |
tgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcca |
312 |
Q |
| |
|
||||||||||||| |||| |||||| ||||| |||| | |||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |
|
|
| T |
4602122 |
cgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcagatgacaaaatcactgagcca |
4602221 |
T |
|
| Q |
313 |
ccaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||| |
|
|
| T |
4602222 |
ccaatgacaagatcaggcctaatgatccacaaaaa |
4602256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 127 - 347
Target Start/End: Original strand, 4592481 - 4592698
Alignment:
| Q |
127 |
aatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttca |
226 |
Q |
| |
|
||||||||||||||||| || | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
4592481 |
aatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaat---tgaagggtggttta |
4592577 |
T |
|
| Q |
227 |
gtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatc |
326 |
Q |
| |
|
|||||||||||| ||||| | |||| |||| |||||||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |
|
|
| T |
4592578 |
atacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccgatgacaaaacaattgtgccaccaatgacaagatc |
4592677 |
T |
|
| Q |
327 |
agacctaatgatctacaaaaa |
347 |
Q |
| |
|
|| |||||||||| ||||||| |
|
|
| T |
4592678 |
aggcctaatgatccacaaaaa |
4592698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 4622275 - 4622611
Alignment:
| Q |
10 |
gacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctta |
109 |
Q |
| |
|
|||||||||||||| | || ||| ||||||||| || ||||||||||||| |||||| ||||| || ||||||| ||||| |||||||| ||| || |
|
|
| T |
4622275 |
gacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttg |
4622374 |
T |
|
| Q |
110 |
ctgggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaat |
209 |
Q |
| |
|
||| || |||||||||||||||||||||| ||| | |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4622375 |
ttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccacc--- |
4622471 |
T |
|
| Q |
210 |
aattgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgag |
309 |
Q |
| |
|
||||| ||||||||| ||||||| |||||| ||||| ||| | |||||||||||| ||||||||||||| ||||||| |||||||||| || ||| |
|
|
| T |
4622472 |
aattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgag |
4622571 |
T |
|
| Q |
310 |
ccaccaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|| || |||||||| |||| |||||||||| ||||||||| |
|
|
| T |
4622572 |
ccgcccatgacaaggtcaggcctaatgatccacaaaaagg |
4622611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 9 - 339
Target Start/End: Original strand, 4560638 - 4560964
Alignment:
| Q |
9 |
ggacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctt |
108 |
Q |
| |
|
||||||||||||||| |||| |||||||| ||||||||||| ||||| ||||| ||||| |||| || | |||| ||||| |||||||| ||| || |
|
|
| T |
4560638 |
ggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagttt |
4560737 |
T |
|
| Q |
109 |
actgggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaa |
208 |
Q |
| |
|
|||| || || || |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4560738 |
gctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccacc-- |
4560835 |
T |
|
| Q |
209 |
taattgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactga |
308 |
Q |
| |
|
| ||| |||||||||| ||||| |||||| ||||| |||| | |||||| ||||||| ||||||||| |||| ||| || ||||| ||||| || || |
|
|
| T |
4560836 |
-gactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttca-aaaatcagatgagaaaaccaccga |
4560933 |
T |
|
| Q |
309 |
gccaccaatgacaagatcagacctaatgatc |
339 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |
|
|
| T |
4560934 |
gccaccaatgacaagatcaggcctaatgatc |
4560964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 12 - 349
Target Start/End: Original strand, 4469938 - 4470272
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| || | |||||||||||| || |||||||||| |||||||||||| ||| || |||||| ||||| ||| |||| || || || |
|
|
| T |
4469938 |
catcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgct |
4470037 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
| || ||| | || ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
4470038 |
agctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccacc---ga |
4470134 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| | || ||||||||||||| ||||||| |||| |||| ||| ||||| ||||| || ||||| |
|
|
| T |
4470135 |
ttgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatttacaatctctgatgagaaaactaccgagcc |
4470234 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
4470235 |
gccaatgacaagatcgggcctaatgatccacaaaaagg |
4470272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 12 - 349
Target Start/End: Complemental strand, 4515118 - 4514784
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| || | ||| || |||||||| ||||||||||| |||||||||| || || || |||||| ||||| ||| |||| ||| || | |
|
|
| T |
4515118 |
catcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgtt |
4515019 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||| | || ||| ||||||| | ||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4515018 |
ggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaat-- |
4514921 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||| |||| | |||||||||||||| || |||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
4514920 |
-tgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcagacgacaaaaccactgagcc |
4514822 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||||| |
|
|
| T |
4514821 |
accaatgacaagatcaggcctaatgatccataaaaagg |
4514784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 349
Target Start/End: Original strand, 3171982 - 3172210
Alignment:
| Q |
118 |
tcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaag |
217 |
Q |
| |
|
||||| |||||||||| ||||||||| |||| || ||||||| ||||| ||||||||||||||||| || |||||||||||||| ||||| ||||| |
|
|
| T |
3171982 |
tcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaat---tgaag |
3172078 |
T |
|
| Q |
218 |
ggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaat |
317 |
Q |
| |
|
| ||||||| |||| ||||||| ||||| |||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
3172079 |
gatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaat |
3172178 |
T |
|
| Q |
318 |
gacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||| |
|
|
| T |
3172179 |
gacaagatcaggcctaataatccacaaaaagg |
3172210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 347
Target Start/End: Complemental strand, 4267163 - 4266831
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| || |||||||| || || || ||||||||||| |||| |||||| | ||| || |||||| | ||| ||| |||| ||| || | |
|
|
| T |
4267163 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
4267064 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||| | || ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |
|
|
| T |
4267063 |
ggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccacc---aa |
4266967 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
| ||||||||||||| |||| ||||| ||||| |||| | |||||| ||||||| ||||||||| || | ||| || |||||||||||||||||||| |
|
|
| T |
4266966 |
tcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgacaaaacaactgagcc |
4266867 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
4266866 |
cccaatgacaagatcaggcctaattatccacaaaaa |
4266831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 4568195 - 4568523
Alignment:
| Q |
16 |
aattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggt |
115 |
Q |
| |
|
|||||||| | || ||||||||||||||| ||||||||||| ||||| ||||| |||||||| ||| | | || || |||||||||||| | ||| | |
|
|
| T |
4568195 |
aattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggct |
4568294 |
T |
|
| Q |
116 |
gttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattga |
215 |
Q |
| |
|
| |||| ||||| |||||||| ||||| || ||||||||||| |||||||| || |||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
4568295 |
gctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaac---tga |
4568391 |
T |
|
| Q |
216 |
agggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccacca |
315 |
Q |
| |
|
||||||||||| |||||||||||| ||||| | || | |||| ||||||||| ||| || |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4568392 |
agggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaaaataactgagccacca |
4568491 |
T |
|
| Q |
316 |
atgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||| | || |||||||||| ||||||| |
|
|
| T |
4568492 |
atgacaagctaaggcctaatgatccacaaaaa |
4568523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 30 - 349
Target Start/End: Complemental strand, 4260133 - 4259817
Alignment:
| Q |
30 |
cttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggtgttcagcgaaaaat |
129 |
Q |
| |
|
|||| ||||||| || || ||||||||||||| ||||||||||| || |||||| || || ||| |||| ||| || ||| || ||||| |||||| |
|
|
| T |
4260133 |
cttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctgatcagcaaaaaat |
4260034 |
T |
|
| Q |
130 |
ggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagta |
229 |
Q |
| |
|
|||||||||||||| || ||| |||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
4260033 |
ggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaac---tgaagagtggttcagta |
4259937 |
T |
|
| Q |
230 |
cttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcaga |
329 |
Q |
| |
|
||||||||||| ||||| | |||| ||||||||||||| ||||||||| || ||||||| |||||||||| || ||||||||||| | || |||| |
|
|
| T |
4259936 |
cttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgacaaaataaaggagccaccaataatgaggtcagg |
4259837 |
T |
|
| Q |
330 |
cctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||| ||||||||| |
|
|
| T |
4259836 |
cctaatgatccacaaaaagg |
4259817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 12 - 347
Target Start/End: Original strand, 4457729 - 4458061
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| || |||||||||||||| || ||||||||||| ||||||||||| || || || || ||| ||||| ||| |||| || ||| | |
|
|
| T |
4457729 |
catcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgtt |
4457828 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| | ||| | || |||||||||| || ||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
4457829 |
ggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgat-- |
4457926 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
|||||||||||||| |||| ||||| ||||| |||| | ||||| |||||||| ||| ||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
4457927 |
-tgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccgatgacaaaacaaccgagcc |
4458025 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
||||||||||||||||| |||| | ||| ||||||| |
|
|
| T |
4458026 |
accaatgacaagatcaggcctagttatccacaaaaa |
4458061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 347
Target Start/End: Original strand, 4516460 - 4516788
Alignment:
| Q |
16 |
aattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggt |
115 |
Q |
| |
|
|||||||| | || ||||||||||||||| ||||||||||| ||||| ||||| ||| || |||||| ||||| ||||||||||| || ||| | |
|
|
| T |
4516460 |
aattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggct |
4516559 |
T |
|
| Q |
116 |
gttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattga |
215 |
Q |
| |
|
| ||||| ||||| |||||||||||||| || |||| |||||| |||||||| | || ||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
4516560 |
gctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaac---tga |
4516656 |
T |
|
| Q |
216 |
agggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccacca |
315 |
Q |
| |
|
||| ||||||| |||| ||||||| ||||| | || | ||||| |||||||| ||| ||||||||||||| ||||||||||||| ||| ||||||||| |
|
|
| T |
4516657 |
aggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcggatgacaaaataaccgagccacca |
4516756 |
T |
|
| Q |
316 |
atgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||| |||| |||||| ||| ||||||| |
|
|
| T |
4516757 |
atgacaaggtcaggcctaataatccacaaaaa |
4516788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 348
Target Start/End: Original strand, 4480943 - 4481161
Alignment:
| Q |
127 |
aatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttca |
226 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |
|
|
| T |
4480943 |
aatggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgat---tgaagggtggttca |
4481039 |
T |
|
| Q |
227 |
gtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatc |
326 |
Q |
| |
|
|||| |||||| ||||| |||| | |||||||||||||| ||||||||| |||| | |||| |||||||| || |||||||||||||||||||||| |
|
|
| T |
4481040 |
aaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactcagatgacaacaccactgagccaccaatgacaagatt |
4481139 |
T |
|
| Q |
327 |
agacctaatgatctacaaaaag |
348 |
Q |
| |
|
||||||||| ||| |||||||| |
|
|
| T |
4481140 |
agacctaataatccacaaaaag |
4481161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 118 - 349
Target Start/End: Complemental strand, 4490246 - 4490018
Alignment:
| Q |
118 |
tcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaag |
217 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||||||| || || || |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4490246 |
tcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccacc---aattgaag |
4490150 |
T |
|
| Q |
218 |
ggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaat |
317 |
Q |
| |
|
|||| |||| ||| | |||||| ||||| |||| | |||||| ||||||| ||||||||| |||| ||| || |||||||| || |||||||||||| |
|
|
| T |
4490149 |
ggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgacaacacctgtgagccaccaat |
4490050 |
T |
|
| Q |
318 |
gacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| |
|
|
| T |
4490049 |
aacaagatcaggcctaatgatccacaaaaagg |
4490018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 49 - 349
Target Start/End: Original strand, 4506029 - 4506326
Alignment:
| Q |
49 |
ttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggtgttcagcgaaaaatggccaacacaacatcggca |
148 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||| || ||||| ||| |||| ||| || ||| || ||| | || || |||||||||| ||| |||| |
|
|
| T |
4506029 |
ttcacattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagcattggca |
4506128 |
T |
|
| Q |
149 |
ctctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagtacttgctcttgcagacacga |
248 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || | |||| |||||| |||| | |
|
|
| T |
4506129 |
ctccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaat---tgaagggtgatttaacactttctcttgtgaacacca |
4506225 |
T |
|
| Q |
249 |
actcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcagacctaatgatctacaaaaag |
348 |
Q |
| |
|
|| | ||| |||| ||||| |||||||||||| ||||||| || |||||||| |||||||||||||| |||||||||| |||||||||| |||||||| |
|
|
| T |
4506226 |
gcttgctataaggcttctatctgaaatttcatttgcaaactctgaagacaaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaag |
4506325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 39 - 347
Target Start/End: Original strand, 4617184 - 4617489
Alignment:
| Q |
39 |
ctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggtgttcagcgaaaaatggccaacac |
138 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || || || |||||| || || ||| |||| ||| | ||| || || || ||||||||||||||| |
|
|
| T |
4617184 |
ctcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacac |
4617283 |
T |
|
| Q |
139 |
aacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagtacttgctctt |
238 |
Q |
| |
|
||||| ||||||| || ||||| |||||||||||||| |||||||| ||||||||||||||||| || || |||||||||||||| |||| |||| |
|
|
| T |
4617284 |
aacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgat---tgaagggtggttcaacactttgtctt |
4617380 |
T |
|
| Q |
239 |
gcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcagacctaatgat |
338 |
Q |
| |
|
| ||||| |||| | |||||||||||||| || ||||||||| |||||| ||||| |||| ||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
4617381 |
gtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatgagaaaatcactgagccaccaatgacaagatcaggccttatgat |
4617480 |
T |
|
| Q |
339 |
ctacaaaaa |
347 |
Q |
| |
|
| ||||||| |
|
|
| T |
4617481 |
ccacaaaaa |
4617489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 252
Target Start/End: Complemental strand, 4256611 - 4256371
Alignment:
| Q |
10 |
gacatcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagctta |
109 |
Q |
| |
|
|||||||||||||| | || ||||||||||| || |||||||||||||||| |||||||||||| || |||||| | || ||| |||| ||| || |
|
|
| T |
4256611 |
gacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctacaaataaatctacagtttg |
4256512 |
T |
|
| Q |
110 |
ctggg-tgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaa |
208 |
Q |
| |
|
||| || ||||| |||||||||||||||||||| || |||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4256511 |
ttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccacc-- |
4256414 |
T |
|
| Q |
209 |
taattgaagggtggttcagtacttgctcttgcagacacgaactc |
252 |
Q |
| |
|
|| ||||| |||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4256413 |
-aactgaagagtggttcagtacttgctcttgcggacaccaactc |
4256371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 4299673 - 4299486
Alignment:
| Q |
157 |
catatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagtacttgctcttgcagacacgaactcgtta |
256 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| | || | |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccacc---aattgaagggtggttcagtacttgttcttgtggacactagcttgcgg |
4299577 |
T |
|
| Q |
257 |
ttaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||| |||||||||| || |||| ||||||||||| || | |||||||||| ||||||| |
|
|
| T |
4299576 |
ttaggcctctatttgaaatttcattctcaaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaa |
4299486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 347
Target Start/End: Complemental strand, 4504282 - 4504062
Alignment:
| Q |
124 |
aaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggt |
223 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
4504282 |
aaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctcc---gattgaagggtggt |
4504186 |
T |
|
| Q |
224 |
tcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaag |
323 |
Q |
| |
|
||| |||| ||||| ||||| |||| | || || ||||||| ||| ||||||||||||| || |||||||| || ||||||||||||| ||||| |
|
|
| T |
4504185 |
tcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcagatgacaacacctctgagccaccaataacaag |
4504086 |
T |
|
| Q |
324 |
atcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
||||| |||||| ||| ||||||| |
|
|
| T |
4504085 |
atcaggcctaataatccacaaaaa |
4504062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 268
Target Start/End: Original strand, 4493208 - 4493343
Alignment:
| Q |
130 |
ggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagta |
229 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| | |
|
|
| T |
4493208 |
ggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccacc---aatcgaatggtggttcagca |
4493304 |
T |
|
| Q |
230 |
cttgctcttgcagacacgaactcgttattaggcctctat |
268 |
Q |
| |
|
|| |||||| ||||| |||| | ||||||||||||| |
|
|
| T |
4493305 |
gtttctcttgtggacaccaactagcaattaggcctctat |
4493343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 4299743 - 4299671
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccat |
84 |
Q |
| |
|
|||||||||||| | || ||| ||||||||||| ||| ||||||| ||||||||||| ||||| || |||||| |
|
|
| T |
4299743 |
catcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 4391976 - 4391901
Alignment:
| Q |
160 |
atgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggtggttcagtacttgctctt |
238 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||| || |||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
4391976 |
atgctttcaatgggtgagtttcatccacaatgcgttaagaatccac---aaattcaagggtggttcaatacttgctctt |
4391901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 347
Target Start/End: Original strand, 3086555 - 3086887
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| | || |||||| |||||||| ||||||||||||||||||||||||||||| || |||||| | ||||| |||||||| ||| ||| | |
|
|
| T |
3086555 |
catcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgcagatatatctacagtttatt |
3086654 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || || | ||||||||||||||||||| ||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3086655 |
ggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaat-- |
3086752 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||||| |||| ||||||||||||| ||||| | || | ||||| ||||||| ||||||||| ||| ||||||| ||||||| || || ||||| |
|
|
| T |
3086753 |
-tgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcagatgacataataaaggagcc |
3086851 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||| |
|
|
| T |
3086852 |
gccaatgacaagatcaggcctaatgatccacaaaaa |
3086887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 121 - 351
Target Start/End: Complemental strand, 4574 - 4347
Alignment:
| Q |
121 |
gcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaagggt |
220 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
4574 |
gcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaat---tgaagggt |
4478 |
T |
|
| Q |
221 |
ggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgac |
320 |
Q |
| |
|
||||||||||||||||||| ||||| | |||| ||||||||||||| ||||||||||||| ||||||| |||||||||| || ||||| |||||||| |
|
|
| T |
4477 |
ggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaataaacgagccgccaatgac |
4378 |
T |
|
| Q |
321 |
aagatcagacctaatgatctacaaaaaggat |
351 |
Q |
| |
|
||| |||| |||||||||| ||||||||||| |
|
|
| T |
4377 |
aaggtcaggcctaatgatccacaaaaaggat |
4347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 1281250 - 1281581
Alignment:
| Q |
13 |
atcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactg |
112 |
Q |
| |
|
||||||||||| | |||||| |||||||||| ||||||||||| ||||||||||| || || || | |||| || || ||| |||| ||| | || |
|
|
| T |
1281250 |
atcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg |
1281349 |
T |
|
| Q |
113 |
ggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataat |
212 |
Q |
| |
|
| || ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
1281350 |
gctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccacc---gat |
1281446 |
T |
|
| Q |
213 |
tgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcca |
312 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||| |||| | |||||||||||||| ||||||||||||| |||| || |||||||||| |||||||| |
|
|
| T |
1281447 |
tgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcagatgacaaaatcactgagccg |
1281546 |
T |
|
| Q |
313 |
ccaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
1281547 |
ccaatgacaagatcaggcctagtgatccacaaaaa |
1281581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 347
Target Start/End: Complemental strand, 3714 - 3384
Alignment:
| Q |
14 |
tcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgg |
113 |
Q |
| |
|
|||||||||| || | |||||||||||| || |||||||||| |||||||||||| ||| || |||||| ||||| ||| |||| ||| || ||| |
|
|
| T |
3714 |
tcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttgg |
3615 |
T |
|
| Q |
114 |
gtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataatt |
213 |
Q |
| |
|
|| ||| | || ||||||||||| | ||| || |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
3614 |
ctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaat---t |
3518 |
T |
|
| Q |
214 |
gaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccac |
313 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| | || || ||||||||||||| ||||||||||||| |||| || |||||||||| || ||||| | |
|
|
| T |
3517 |
gaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctgatgacaaaataaacgagccgc |
3418 |
T |
|
| Q |
314 |
caatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| |
|
|
| T |
3417 |
caatgacaagatcaggcctaatgatccacaaaaa |
3384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 349
Target Start/End: Complemental strand, 20863840 - 20863506
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| |||| | ||||||||||||| ||||| ||||| || || ||||| || || || |||||| | ||||| || ||||||||| || |
|
|
| T |
20863840 |
catcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtc |
20863741 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||||| ||||||||||| |||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
20863740 |
ggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaat-- |
20863643 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
|||||| ||||||| || | |||||| ||||| |||||| ||||||||||||| ||||||||||||||||||| | ||||| |||| || ||||| |
|
|
| T |
20863642 |
-tgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaatcaccgagcc |
20863544 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
20863543 |
accaatgacaagatcaggcctaatgatccacaaaaagg |
20863506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 12 - 339
Target Start/End: Complemental strand, 16686264 - 16685940
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| || ||||||||||| || || ||||| || || || |||||| ||||| ||||||||||| || || |
|
|
| T |
16686264 |
catcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctgcattttgct |
16686165 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
16686164 |
ggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccacc---ga |
16686068 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
||||||| ||||| | ||||||||||||| | ||| | |||| ||||||| ||||| ||| ||||||||| |||||| ||||||||||| || || || |
|
|
| T |
16686067 |
ttgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcagatgacaaaaccacggaacc |
16685968 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatc |
339 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
16685967 |
gcaaatgacaagatcagacctaatgatc |
16685940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 118 - 347
Target Start/End: Original strand, 1674467 - 1674693
Alignment:
| Q |
118 |
tcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaag |
217 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| || || ||||||||||| || || ||||| |
|
|
| T |
1674467 |
tcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgat---tgaag |
1674563 |
T |
|
| Q |
218 |
ggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaat |
317 |
Q |
| |
|
||||||||| |||| |||||| ||||| || | | |||||||||||||| ||||||||| |||| |||||| ||||||||||| |||||||||||||| |
|
|
| T |
1674564 |
ggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatgacaaaaccactgagccaccaat |
1674663 |
T |
|
| Q |
318 |
gacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
||||||||||| |||| ||||| ||||||| |
|
|
| T |
1674664 |
gacaagatcaggcctagtgatccacaaaaa |
1674693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 1969181 - 1969143
Alignment:
| Q |
171 |
ggttgagttccatccacaatgagtcaagaatccaccaat |
209 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaat |
1969143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 347
Target Start/End: Original strand, 24103134 - 24103466
Alignment:
| Q |
12 |
catcaattcattaaccaacttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttact |
111 |
Q |
| |
|
|||||||||||| || |||||||| || || || ||||||||||| ||||||||||| | ||| || |||||| | ||| ||| |||| ||| || | |
|
|
| T |
24103134 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
24103233 |
T |
|
| Q |
112 |
gggtgttcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataa |
211 |
Q |
| |
|
|| || ||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
24103234 |
ggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccacc---aa |
24103330 |
T |
|
| Q |
212 |
ttgaagggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagcc |
311 |
Q |
| |
|
| ||||||||||| | |||| ||||| ||||| |||| | |||||| ||||||| ||||| ||| || | ||| || |||||||||||||||||||| |
|
|
| T |
24103331 |
tcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgacaaaacaactgagcc |
24103430 |
T |
|
| Q |
312 |
accaatgacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
24103431 |
cccaatgacaagatcaggcctaattatccacaaaaa |
24103466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 347
Target Start/End: Complemental strand, 27999990 - 27999764
Alignment:
| Q |
118 |
tcagcgaaaaatggccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaataattgaag |
217 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||| || ||||||||||| ||||||||||||||||| || ||||||||||| || | | ||||||| |
|
|
| T |
27999990 |
tcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacccgc---tgattgaag |
27999894 |
T |
|
| Q |
218 |
ggtggttcagtacttgctcttgcagacacgaactcgttattaggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaat |
317 |
Q |
| |
|
||||||||| |||| |||||| ||||| || | | |||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||||||||||| |
|
|
| T |
27999893 |
ggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactcagatgacaaaaccactgagccaccaat |
27999794 |
T |
|
| Q |
318 |
gacaagatcagacctaatgatctacaaaaa |
347 |
Q |
| |
|
|||||||| || |||| ||||| ||||||| |
|
|
| T |
27999793 |
gacaagattaggcctagtgatccacaaaaa |
27999764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 3662 - 3485
Alignment:
| Q |
31 |
ttctccacctcctccctcttcacattagtatcgatttcaattccgatttcccatgttttgcatatatatctgcagcttactgggtgttcagcgaaaaatg |
130 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||| |||||| |||| || |||||| || || || |||| ||| || || |||||| | |||||||| |
|
|
| T |
3662 |
ttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaaatg |
3563 |
T |
|
| Q |
131 |
gccaacacaacatcggcactctggcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaa |
208 |
Q |
| |
|
|||||| || ||| || |||| | ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3562 |
gccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaa |
3485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 3261 - 3172
Alignment:
| Q |
260 |
ggcctctatgtgaaatttcattcacaaactcggatgacaaaacaactgagccaccaatgacaagatcagacctaatgatctacaaaaagg |
349 |
Q |
| |
|
||||||||| |||| |||||||| ||||||| || ||||| || ||| || ||||||||||| ||||||||||||||| ||| ||||| |
|
|
| T |
3261 |
ggcctctatctgaagtttcattctcaaactcatataacaaagcacatgatccgccaatgacaaggtcagacctaatgatccacacaaagg |
3172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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