View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11943_low_14 (Length: 269)
Name: NF11943_low_14
Description: NF11943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11943_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 36093547 - 36093310
Alignment:
| Q |
19 |
tattgtacacagaaacagattctgattttcttggtacgacttcgtgcatttttgcttctaagtctttcaagcatttcttggtcagtgaatatgcttcctg |
118 |
Q |
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| T |
36093547 |
tattgtacacagaaacagattctgattttcttggtacgacttcgtgcatttttgcttctaagtctttcaagcatttcttggtcagtgaatatgcttcctg |
36093448 |
T |
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| Q |
119 |
gtgagctcaagaacactgtacgtggaactggaggagaccataatccacttttttcataatcaaagtcgaattgcggttcatcgtagaatttcagcagcaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36093447 |
gtgagctcaagaacactgtacgtggaactggaggagaccataatccacttttttcataatcaaagtcgaattgcggttcatcgtagaatttcagcagcaa |
36093348 |
T |
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| Q |
219 |
cctatcagagacagactttgaaacaatttgaatcttct |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
36093347 |
cctatcagagacagactttgaaacaatttgaatcttct |
36093310 |
T |
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