View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11943_low_16 (Length: 252)

Name: NF11943_low_16
Description: NF11943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11943_low_16
NF11943_low_16
[»] chr4 (38 HSPs)
chr4 (20-139)||(19220524-19220644)
chr4 (147-245)||(19220706-19220804)
chr4 (34-113)||(37980131-37980213)
chr4 (24-135)||(25852209-25852322)
chr4 (24-135)||(40058941-40059054)
chr4 (24-135)||(46714387-46714501)
chr4 (24-135)||(27528884-27528997)
chr4 (34-113)||(25434643-25434723)
chr4 (24-135)||(41621686-41621798)
chr4 (61-120)||(37455609-37455668)
chr4 (34-96)||(42245751-42245813)
chr4 (34-96)||(51535618-51535680)
chr4 (37-96)||(56409964-56410025)
chr4 (24-135)||(22625159-22625272)
chr4 (24-135)||(32986192-32986305)
chr4 (24-120)||(54127447-54127544)
chr4 (79-135)||(9698226-9698281)
chr4 (45-124)||(13017745-13017825)
chr4 (35-86)||(10125788-10125839)
chr4 (34-135)||(33696368-33696471)
chr4 (34-128)||(35229173-35229268)
chr4 (47-112)||(21344842-21344908)
chr4 (56-112)||(30938203-30938261)
chr4 (60-94)||(37492721-37492755)
chr4 (34-97)||(38206126-38206191)
chr4 (34-96)||(40252303-40252365)
chr4 (66-99)||(3392792-3392825)
chr4 (60-112)||(25414199-25414252)
chr4 (34-96)||(29195105-29195169)
chr4 (24-135)||(34844847-34844960)
chr4 (61-112)||(46295136-46295189)
chr4 (60-97)||(47183360-47183397)
chr4 (24-135)||(52983614-52983727)
chr4 (36-96)||(1985843-1985903)
chr4 (44-96)||(7093391-7093443)
chr4 (44-96)||(8158278-8158330)
chr4 (24-96)||(13873425-13873497)
chr4 (60-92)||(27908542-27908574)
[»] chr7 (37 HSPs)
chr7 (34-138)||(12211622-12211727)
chr7 (34-128)||(1469121-1469216)
chr7 (23-135)||(23330829-23330942)
chr7 (34-134)||(28646978-28647079)
chr7 (24-135)||(21574192-21574305)
chr7 (34-96)||(22696329-22696391)
chr7 (24-135)||(2751270-2751383)
chr7 (34-125)||(577688-577779)
chr7 (34-128)||(8435792-8435887)
chr7 (34-135)||(27312161-27312264)
chr7 (19-135)||(7275271-7275389)
chr7 (34-135)||(36173044-36173146)
chr7 (24-135)||(7175951-7176064)
chr7 (24-135)||(21217922-21218035)
chr7 (24-135)||(40542999-40543112)
chr7 (57-128)||(37056246-37056318)
chr7 (34-98)||(42913641-42913705)
chr7 (34-135)||(22119897-22120000)
chr7 (23-135)||(2103053-2103167)
chr7 (24-135)||(18044106-18044219)
chr7 (44-135)||(19421250-19421343)
chr7 (24-96)||(11997848-11997920)
chr7 (24-96)||(23854395-23854467)
chr7 (47-114)||(46279039-46279107)
chr7 (57-120)||(36772408-36772471)
chr7 (58-120)||(40332132-40332195)
chr7 (48-98)||(674555-674605)
chr7 (31-128)||(7262223-7262321)
chr7 (47-120)||(48125151-48125225)
chr7 (24-135)||(10091187-10091300)
chr7 (24-135)||(27009358-27009471)
chr7 (35-96)||(42814874-42814935)
chr7 (24-96)||(2344298-2344370)
chr7 (24-96)||(7799962-7800034)
chr7 (24-134)||(17212052-17212164)
chr7 (56-96)||(37693692-37693732)
chr7 (24-76)||(39145802-39145854)
[»] chr5 (31 HSPs)
chr5 (25-135)||(19145501-19145612)
chr5 (26-128)||(8780475-8780578)
chr5 (24-135)||(25586927-25587040)
chr5 (24-135)||(23270611-23270724)
chr5 (24-135)||(32059529-32059642)
chr5 (24-96)||(36954813-36954885)
chr5 (34-136)||(38631049-38631153)
chr5 (34-128)||(2499275-2499370)
chr5 (34-135)||(38684213-38684316)
chr5 (34-96)||(10869695-10869757)
chr5 (46-96)||(15485421-15485471)
chr5 (75-135)||(10824049-10824110)
chr5 (24-120)||(22392696-22392790)
chr5 (60-96)||(16172985-16173021)
chr5 (34-128)||(22253241-22253337)
chr5 (24-137)||(13038541-13038656)
chr5 (24-137)||(13108536-13108651)
chr5 (64-99)||(19883172-19883207)
chr5 (24-87)||(33025475-33025538)
chr5 (34-97)||(39459326-39459389)
chr5 (24-128)||(27498827-27498933)
chr5 (34-96)||(31288076-31288138)
chr5 (34-134)||(33709591-33709693)
chr5 (24-135)||(11926591-11926704)
chr5 (24-135)||(15641194-15641307)
chr5 (34-99)||(15971249-15971314)
chr5 (56-135)||(18207234-18207315)
chr5 (56-128)||(36895452-36895525)
chr5 (23-92)||(40330627-40330696)
chr5 (60-96)||(14656645-14656681)
chr5 (33-112)||(16457819-16457902)
[»] chr2 (31 HSPs)
chr2 (22-128)||(8192448-8192555)
chr2 (34-128)||(4618782-4618877)
chr2 (24-134)||(19605936-19606046)
chr2 (56-138)||(28194220-28194303)
chr2 (44-94)||(18708492-18708542)
chr2 (35-128)||(3405249-3405343)
chr2 (57-138)||(40591211-40591293)
chr2 (24-135)||(15037954-15038067)
chr2 (24-120)||(25293161-25293258)
chr2 (34-133)||(26176289-26176388)
chr2 (33-113)||(26482102-26482185)
chr2 (46-120)||(6099495-6099570)
chr2 (46-128)||(19525493-19525576)
chr2 (34-128)||(36179881-36179976)
chr2 (24-135)||(30466919-30467032)
chr2 (35-96)||(32526215-32526276)
chr2 (24-135)||(33827662-33827775)
chr2 (75-124)||(44026848-44026897)
chr2 (46-101)||(38341754-38341809)
chr2 (24-114)||(40997461-40997552)
chr2 (34-96)||(4852563-4852625)
chr2 (35-97)||(14946785-14946847)
chr2 (61-114)||(16525217-16525271)
chr2 (24-114)||(18976537-18976627)
chr2 (24-97)||(20297558-20297632)
chr2 (39-135)||(27290598-27290696)
chr2 (44-135)||(10582079-10582172)
chr2 (33-69)||(4893083-4893119)
chr2 (35-83)||(6007032-6007080)
chr2 (63-114)||(18825382-18825434)
chr2 (24-96)||(44946183-44946255)
[»] chr6 (31 HSPs)
chr6 (25-129)||(8479308-8479413)
chr6 (56-135)||(9208279-9208359)
chr6 (24-92)||(33499469-33499537)
chr6 (24-135)||(15360187-15360300)
chr6 (34-114)||(6691533-6691616)
chr6 (56-135)||(17149546-17149626)
chr6 (46-96)||(28741971-28742021)
chr6 (24-135)||(12591632-12591745)
chr6 (58-94)||(13564957-13564993)
chr6 (34-135)||(11448876-11448979)
chr6 (35-135)||(5360160-5360262)
chr6 (34-120)||(28028540-28028629)
chr6 (36-135)||(654235-654336)
chr6 (24-96)||(9238970-9239042)
chr6 (58-94)||(13569512-13569548)
chr6 (58-94)||(13574058-13574094)
chr6 (58-94)||(13576597-13576633)
chr6 (58-94)||(13579743-13579779)
chr6 (24-96)||(28672062-28672134)
chr6 (45-135)||(6164337-6164423)
chr6 (33-119)||(12234484-12234574)
chr6 (57-128)||(10377743-10377815)
chr6 (24-135)||(3222724-3222836)
chr6 (60-97)||(3433602-3433639)
chr6 (47-92)||(6384008-6384053)
chr6 (34-99)||(9843943-9844008)
chr6 (24-120)||(13753235-13753332)
chr6 (24-135)||(34147341-34147454)
chr6 (24-135)||(34159957-34160070)
chr6 (44-96)||(11007180-11007232)
chr6 (24-96)||(22576062-22576134)
[»] chr1 (41 HSPs)
chr1 (24-96)||(24216973-24217045)
chr1 (24-135)||(32729540-32729652)
chr1 (24-135)||(46607805-46607918)
chr1 (24-135)||(1138574-1138686)
chr1 (56-134)||(25237080-25237159)
chr1 (24-128)||(809217-809322)
chr1 (34-127)||(52135135-52135229)
chr1 (24-135)||(1486415-1486525)
chr1 (24-135)||(4621326-4621439)
chr1 (24-135)||(8077642-8077755)
chr1 (24-135)||(24674388-24674501)
chr1 (56-135)||(19034476-19034556)
chr1 (24-125)||(7197346-7197448)
chr1 (47-112)||(19480552-19480618)
chr1 (24-135)||(15059491-15059604)
chr1 (47-127)||(39714748-39714829)
chr1 (60-113)||(44417446-44417499)
chr1 (39-134)||(10059065-10059161)
chr1 (44-134)||(17935784-17935876)
chr1 (24-135)||(29057427-29057539)
chr1 (24-99)||(1378893-1378968)
chr1 (47-86)||(9926288-9926327)
chr1 (46-120)||(38939226-38939301)
chr1 (60-126)||(41470581-41470648)
chr1 (34-120)||(15581118-15581207)
chr1 (60-94)||(23439880-23439914)
chr1 (63-112)||(34228915-34228965)
chr1 (47-101)||(37047010-37047064)
chr1 (47-128)||(39012316-39012398)
chr1 (60-112)||(6127971-6128024)
chr1 (39-96)||(7578419-7578476)
chr1 (48-96)||(27223131-27223180)
chr1 (60-120)||(39964543-39964604)
chr1 (56-96)||(40810501-40810542)
chr1 (76-120)||(45266889-45266934)
chr1 (56-135)||(16539635-16539715)
chr1 (24-96)||(27454996-27455068)
chr1 (24-96)||(34778337-34778409)
chr1 (24-135)||(40802157-40802269)
chr1 (60-96)||(43983707-43983743)
chr1 (60-119)||(44486135-44486195)
[»] chr8 (30 HSPs)
chr8 (33-124)||(15974914-15975004)
chr8 (44-135)||(34639297-34639388)
chr8 (34-135)||(26168938-26169040)
chr8 (34-96)||(41070770-41070832)
chr8 (24-135)||(3734712-3734825)
chr8 (24-135)||(42643207-42643320)
chr8 (47-125)||(40136935-40137013)
chr8 (24-135)||(34237744-34237857)
chr8 (24-133)||(18532106-18532217)
chr8 (24-135)||(4718644-4718757)
chr8 (35-128)||(21239359-21239453)
chr8 (34-96)||(34694706-34694768)
chr8 (34-134)||(8387535-8387636)
chr8 (24-135)||(39349255-39349368)
chr8 (34-110)||(6530817-6530896)
chr8 (24-96)||(28088285-28088357)
chr8 (46-124)||(13749077-13749155)
chr8 (44-99)||(24018401-24018456)
chr8 (34-135)||(27746424-27746527)
chr8 (34-135)||(28193483-28193586)
chr8 (33-99)||(33585754-33585820)
chr8 (52-120)||(43594294-43594364)
chr8 (31-115)||(22200670-22200754)
chr8 (24-120)||(32879278-32879375)
chr8 (60-136)||(34778773-34778850)
chr8 (31-92)||(39317026-39317087)
chr8 (45-93)||(3794811-3794859)
chr8 (24-96)||(19471608-19471680)
chr8 (24-96)||(19542532-19542604)
chr8 (24-96)||(19590092-19590164)
[»] scaffold0576 (1 HSPs)
scaffold0576 (24-135)||(5171-5284)
[»] chr3 (50 HSPs)
chr3 (24-128)||(50582987-50583092)
chr3 (24-96)||(48977383-48977455)
chr3 (44-135)||(50162058-50162150)
chr3 (24-120)||(7485630-7485727)
chr3 (24-135)||(25289803-25289916)
chr3 (24-135)||(30257619-30257732)
chr3 (24-135)||(30807242-30807355)
chr3 (24-135)||(35492906-35493019)
chr3 (24-135)||(45529843-45529956)
chr3 (24-96)||(4252526-4252598)
chr3 (24-96)||(21362938-21363010)
chr3 (60-135)||(34844409-34844485)
chr3 (47-122)||(36803066-36803142)
chr3 (34-135)||(15566588-15566691)
chr3 (48-114)||(42430360-42430426)
chr3 (34-94)||(42799751-42799813)
chr3 (35-135)||(26174119-26174221)
chr3 (34-92)||(36660775-36660833)
chr3 (35-135)||(52821724-52821826)
chr3 (24-120)||(7470320-7470417)
chr3 (24-135)||(8456239-8456352)
chr3 (36-135)||(26108299-26108400)
chr3 (24-135)||(34492664-34492777)
chr3 (24-135)||(40133538-40133651)
chr3 (24-135)||(46576343-46576456)
chr3 (24-135)||(49258351-49258464)
chr3 (34-114)||(15034355-15034438)
chr3 (61-120)||(40777052-40777112)
chr3 (34-135)||(25379766-25379869)
chr3 (34-120)||(32151429-32151516)
chr3 (25-96)||(53424306-53424377)
chr3 (57-91)||(26158846-26158880)
chr3 (60-113)||(28834954-28835010)
chr3 (47-109)||(35623255-35623317)
chr3 (47-114)||(13174943-13175012)
chr3 (34-96)||(18316500-18316564)
chr3 (45-98)||(29915397-29915450)
chr3 (45-98)||(29964550-29964603)
chr3 (57-117)||(35053314-35053375)
chr3 (33-96)||(39253707-39253772)
chr3 (47-119)||(40268514-40268587)
chr3 (24-135)||(40940820-40940933)
chr3 (57-112)||(47454601-47454658)
chr3 (24-120)||(52455754-52455851)
chr3 (62-135)||(53167754-53167827)
chr3 (31-96)||(55371415-55371480)
chr3 (24-76)||(31537988-31538040)
chr3 (24-96)||(38732961-38733033)
chr3 (44-96)||(50731363-50731415)
chr3 (44-96)||(50781439-50781491)
[»] scaffold0070 (1 HSPs)
scaffold0070 (24-135)||(40320-40433)
[»] scaffold0199 (1 HSPs)
scaffold0199 (24-124)||(8508-8609)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-135)||(97455-97568)
[»] scaffold0160 (1 HSPs)
scaffold0160 (36-96)||(29272-29332)
[»] scaffold0068 (1 HSPs)
scaffold0068 (24-96)||(41774-41846)
[»] scaffold0459 (1 HSPs)
scaffold0459 (34-135)||(10782-10885)
[»] scaffold0366 (2 HSPs)
scaffold0366 (34-135)||(12089-12192)
scaffold0366 (34-135)||(9388-9491)
[»] scaffold0623 (1 HSPs)
scaffold0623 (34-135)||(1145-1248)
[»] scaffold0217 (1 HSPs)
scaffold0217 (34-135)||(7398-7501)
[»] scaffold0189 (1 HSPs)
scaffold0189 (34-96)||(17725-17789)
[»] scaffold0002 (1 HSPs)
scaffold0002 (47-114)||(131976-132045)
[»] scaffold0028 (1 HSPs)
scaffold0028 (24-96)||(27771-27843)


Alignment Details
Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 19220524 - 19220644
Alignment:
Q  20 tgacacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgg 118  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| | |||||||||||| ||||    
T  19220524 tgacacccatttgaggttggcatggtggttgacttaagatcttggagtgtgctcctctcaaggtttcaggttcgatttcctctagtgccaatttcaatgg 19220623  T
Q  119 gcaagtccatgcagagcaaat 139  Q
    |||||||||||||||||||||    
T  19220624 gcaagtccatgcagagcaaat 19220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 19220706 - 19220804
Alignment:
Q  147 gtttttaatttagtgtatctaatacttcaatctctcttcttatgcagaatttgtctttcaatgttcttgtatgtataattacatgcttgatctctgctt 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  19220706 gtttttaatttagtgtagctaatacttcaatctctcttcttatgcagattttgtctttcaatgttcttgcatgtatagttacatgcttgatctttgctt 19220804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 37980213 - 37980131
Alignment:
Q  34 ggttggcctggtg--gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttc 113  Q
    |||||||||||||  |||| ||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  37980213 ggttggcctggtgatgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccccagtgtcaatttc 37980131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 25852209 - 25852322
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  25852209 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 25852308  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  25852309 agtccatacagagc 25852322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 40059054 - 40058941
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || ||||||  ||||||||||||||||| || |  |||||||||||| ||||| |    
T  40059054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 40058955  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  40058954 agtccatacagagc 40058941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 46714387 - 46714501
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccc--cagtgccaatttcgatgggc- 120  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||||||    |||||||||||| |||||     
T  46714387 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggct 46714486  T
Q  121 aagtccatgcagagc 135  Q
    |||||||| ||||||    
T  46714487 aagtccatacagagc 46714501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 27528997 - 27528884
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    ||||||||| ||||||| | ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  27528997 acccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 27528898  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  27528897 agtccatacagagc 27528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 25434723 - 25434643
Alignment:
Q  34 ggttggcctggtggt-tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttc 113  Q
    ||||||||||||||| || ||| ||| ||||||||||| | |||||||||||||||||| ||||  |||| ||||||||||    
T  25434723 ggttggcctggtggtgtggcttgggaccttggagtgtgcttctctcaaggtctcaggtttgattctcccattgccaatttc 25434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 41621798 - 41621686
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaa 122  Q
    |||||| || |||||||||  |||||| |||  ||||||||||| || |||||||||||||||| ||| ||||||| |  |||||||||| | |||||||    
T  41621798 acccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggcaa 41621699  T
Q  123 gtccatgcagagc 135  Q
     ||||| ||||||    
T  41621698 atccatacagagc 41621686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 37455609 - 37455668
Alignment:
Q  61 ttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggc 120  Q
    ||||||| || ||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  37455609 ttggagtatgctcctctcaaggtctcaggttcgattcccctggtgccaatttcaatgggc 37455668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 42245751 - 42245813
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| ||||||||||| ||||||| |||| || |||||| |||||||| |||||||||    
T  42245751 ggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgatt 42245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 51535618 - 51535680
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| ||||||||||| |||||||||||| || |||||   |||||||||||||||||    
T  51535618 ggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgatt 51535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 56409964 - 56410025
Alignment:
Q  37 tggcctggtg--gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||||  |||| ||| ||| ||||||||||| |||||||||||||||||||||||||    
T  56409964 tggcctggtgctgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgatt 56410025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 22625272 - 22625159
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| |||||||||||| ||||||| ||| |||||||||||| |  |||||   ||||||||||||||||| || |  | |||||||||| ||||| |    
T  22625272 acccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 22625173  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  22625172 agtccatacagagc 22625159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 32986192 - 32986305
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||| ||| || |  |||||||||||| ||||| |    
T  32986192 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggcta 32986291  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  32986292 agtccatacagagc 32986305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 54127544 - 54127447
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||| ||| || |  |||||||||||| |||||    
T  54127544 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggc 54127447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 9698226 - 9698281
Alignment:
Q  79 aaggtctcaggttcgatttccccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||| ||| |||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  9698226 aaggtgtcaagttcgatt-ccccagtgccaatttcgatgggctagtccatccagagc 9698281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 13017745 - 13017825
Alignment:
Q  45 tggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggcaagt 124  Q
    |||||| ||| | |||||| |||||||||||||||||||||||||||| ||| || | | ||||||||| | |||||||||    
T  13017745 tggttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttccattccctctgttgccaattttggtgggcaagt 13017825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 10125788 - 10125839
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctc 86  Q
    |||||||| ||||||||||| |||||||||||| ||||| ||||||| ||||    
T  10125788 gttggcctagtggttgacttgggatcttggagtttgttcgtctcaagatctc 10125839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 33696471 - 33696368
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||| ||| || |  |||||||||||| ||||| |||||||| ||    
T  33696471 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccataca 33696372  T
Q  132 gagc 135  Q
    ||||    
T  33696371 gagc 33696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 35229173 - 35229268
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggc-aagtccat 128  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| |  |  ||||||||||| ||||| ||||||||    
T  35229173 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctatgccaatttcggtgggctaagtccat 35229268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 21344842 - 21344908
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    |||| ||| ||| ||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||||    
T  21344842 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcaattctccccagtgtcaattt 21344908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 30938261 - 30938203
Alignment:
Q  56 ggatcttggagtgtgttcctc-tcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    ||||||||||||||| ||||| || ||||||||||||||||| |||||| |||||||||    
T  30938261 ggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 30938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 37492755 - 37492721
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    ||||||||||| |||||||||||||||||||||||    
T  37492755 cttggagtgtgatcctctcaaggtctcaggttcga 37492721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 38206191 - 38206126
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    ||||| |||||||||  || ||| ||| ||||||||||| |||||||||||||||||||| |||||    
T  38206191 ggttgacctggtggtgctggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattt 38206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 40252303 - 40252365
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || || |||||||| | ||||||||||||| | |||||||||||||| ||||||||    
T  40252303 ggttggtctagtagttgacttggaatcttggagtgtgcttctctcaaggtctcaagttcgatt 40252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 3392825 - 3392792
Alignment:
Q  66 gtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    ||||| ||||||||||||||||||||||||||||    
T  3392825 gtgtgctcctctcaaggtctcaggttcgatttcc 3392792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 25414252 - 25414199
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    ||||||||||| ||||||||| |||||||||| |||| ||||| ||||||||||    
T  25414252 cttggagtgtgctcctctcaaagtctcaggtttgattctccccggtgccaattt 25414199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 29195105 - 29195169
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||||||  || ||| ||| ||||||||||| ||||||||||||| || ||||||||    
T  29195105 ggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtcgcaagttcgatt 29195169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 34844960 - 34844847
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||  |||  ||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  34844960 acccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 34844861  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  34844860 agtccatacagagc 34844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 46295136 - 46295189
Alignment:
Q  61 ttggagtgtgttcctc-tcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    |||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||    
T  46295136 ttggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaattt 46295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 47183360 - 47183397
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  47183360 cttggagtgtgatcctctcaagatctcaggttcgattt 47183397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 52983614 - 52983727
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| |||  ||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||  ||||| |    
T  52983614 acccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggcta 52983713  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  52983714 agtccatacagagc 52983727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1985843 - 1985903
Alignment:
Q  36 ttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  1985843 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 1985903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 7093391 - 7093443
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| ||| ||||||||||||||| |||| ||||||| | ||||||||||    
T  7093391 gtggttggcttgggatcttggagtgtgctcctttcaaggttttaggttcgatt 7093443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 8158278 - 8158330
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||  ||||||||||| | || | |||||||||||||||||||||    
T  8158278 gtggttgacttgagatcttggagtatctttccctcaaggtctcaggttcgatt 8158330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 13873497 - 13873425
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||  ||| |||||||||||| || ||||   ||||||||||||||||||    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgatt 13873425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 27908542 - 27908574
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttc 92  Q
    |||||||||||||||||||||||||||| ||||    
T  27908542 cttggagtgtgttcctctcaaggtctcaagttc 27908574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 12211727 - 12211622
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcag 132  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||| |  |||||||||||||||| ||||||||| |||    
T  12211727 ggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtccatacag 12211628  T
Q  133 agcaaa 138  Q
    ||||||    
T  12211627 agcaaa 12211622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 1469121 - 1469216
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    ||||||||| |||||||||||   |||||||||| ||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||||    
T  1469121 ggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatttcctttaatgccaatttcgatgggcaagtccat 1469216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 23330942 - 23330829
Alignment:
Q  23 cacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggca 121  Q
    ||||||| || |||| |||| ||||||| ||| |||| || ||||||| ||||||||||||||||||||||| | || || |||||||||||| ||||||    
T  23330942 cacccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggca 23330843  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  23330842 agtccatacagagc 23330829  T

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Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 28646978 - 28647079
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcag 132  Q
    ||||||||| ||| ||||||| ||||||||||||||| | ||||||||||||||||||||||| || |  |||||||||||| |||||||||| || |||    
T  28646978 ggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtcaatacag 28647077  T
Q  133 ag 134  Q
    ||    
T  28647078 ag 28647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 21574305 - 21574192
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccc--cagtgccaatttcgatgggca 121  Q
    |||||| || ||||||||| |||||||  || |||| |||||||||| ||||||||||||| ||||||||||| |||    ||||||| |||| ||||||    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggca 21574206  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  21574205 agtccatacagagc 21574192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 22696329 - 22696391
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| |||||||| || ||||||||||||||| |||||||||||||||||||| ||||    
T  22696329 ggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgatt 22696391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 2751270 - 2751383
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  2751270 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 2751369  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  2751370 agtccatacagagc 2751383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 577688 - 577779
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagtc 125  Q
    ||||||||| ||||||  ||| ||||||| |||| || || | ||||||||| |||||||||| ||| | ||||||||||||||||||||||    
T  577688 ggttggcctagtggtttgcttgggatcttagagtttgctcatttcaaggtcttaggttcgattaccctattgccaatttcgatgggcaagtc 577779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 8435887 - 8435792
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    |||||| || ||||||||||| |||||||||||| || |||| | ||| ||| ||||||||||||| |  |||||||||||| |||||||||||||    
T  8435887 ggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagtccat 8435792  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 27312161 - 27312264
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatg-ggcaagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || ||||||  |||| |||||||||||| || | |||||||||||||||| | ||||||||| ||    
T  27312161 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccataca 27312260  T
Q  132 gagc 135  Q
    ||||    
T  27312261 gagc 27312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 7275271 - 7275389
Alignment:
Q  19 ttgacacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatg 117  Q
    |||| |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||    
T  7275271 ttgaaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtg 7275370  T
Q  118 ggc-aagtccatgcagagc 135  Q
    ||| |||||||| ||||||    
T  7275371 ggctaagtccatacagagc 7275389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 36173044 - 36173146
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcag 132  Q
    |||||||||  || ||||||| |||| ||||||| ||||| ||||||||| |||||||||||| || |  |||||||||| | ||||||||||||| |||    
T  36173044 ggttggccttatgattgacttgggattttggagtttgttcatctcaaggtttcaggttcgattccctcttgtgccaattttggtgggcaagtccatacag 36173143  T
Q  133 agc 135  Q
    |||    
T  36173144 agc 36173146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 7176064 - 7175951
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  7176064 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 7175965  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  7175964 agtccatacagagc 7175951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 21218035 - 21217922
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || | | ||||||||||| ||||| |    
T  21218035 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggcta 21217936  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  21217935 agtccatacagagc 21217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 40543112 - 40542999
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  40543112 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 40543013  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  40543012 agtccatacagagc 40542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 37056246 - 37056318
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    |||||||||||||| |||||||||||| | || |||||||||| |  |||||||||||||||| |||||||||    
T  37056246 gatcttggagtgtgctcctctcaaggtttgagattcgatttcctctggtgccaatttcgatggacaagtccat 37056318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 42913705 - 42913641
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc 98  Q
    ||||||||| ||||||| ||| |||||||||||| || ||||||  |||||||||||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttc 42913641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 22119897 - 22120000
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||    
T  22119897 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccataca 22119996  T
Q  132 gagc 135  Q
    ||||    
T  22119997 gagc 22120000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 2103053 - 2103167
Alignment:
Q  23 cacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc- 120  Q
    ||||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||| |||||     
T  2103053 cacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggct 2103152  T
Q  121 aagtccatgcagagc 135  Q
    |||||||| ||||||    
T  2103153 aagtccatacagagc 2103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 18044106 - 18044219
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||| ||||||||||| || |  |||||||||||| ||||| |    
T  18044106 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggcta 18044205  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  18044206 agtccatacagagc 18044219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 19421250 - 19421343
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc-cccagtgccaatttcgatgggc-aagtccatgcagagc 135  Q
    ||||||| ||| |||||||||||| || ||||||  |||||||||||||||||||  |  ||| |||||||||||||| |||||||| ||||||    
T  19421250 gtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagc 19421343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 11997848 - 11997920
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || ||||||  |||||||||||||||||    
T  11997848 acccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 11997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 23854395 - 23854467
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  23854395 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 23854467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 46279039 - 46279107
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||| |||| |||||| | |||||||||    
T  46279039 gttgactttggaccttggagtgtgctcctctcaaggtctccggtttgattctccccattcccaatttcg 46279107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 36772471 - 36772408
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggc 120  Q
    ||||||||||| || ||||||  |||||||||||| |||||||||  ||||||||||| |||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatttcccctatgccaatttcggtgggc 36772408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 40332132 - 40332195
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||||||| || |||||| ||||||||||||||||||||| |  ||| ||||||||||||||    
T  40332132 atcttggagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaatttcgatgggc 40332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 674605 - 674555
Alignment:
Q  48 ttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc 98  Q
    |||||||  ||| |||||||||| |||||||||||||||| ||||||||||    
T  674605 ttgacttgagattttggagtgtgctcctctcaaggtctcaagttcgatttc 674555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 7262223 - 7262321
Alignment:
Q  31 tgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccat 128  Q
    |||||||| | | |||||||||||  ||||||| |||||| |||||||||||||||| ||| |||| |||    ||||||||||||||| ||| |||||    
T  7262223 tgaggttgacttagtggttgacttgtgatcttgtagtgtgatcctctcaaggtctcaagtttgattctccatgatgccaatttcgatggacaaatccat 7262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 48125225 - 48125151
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcga-tttccccagtgccaatttcgatgggc 120  Q
    |||| ||| ||| ||||||||||| |||||  |||||||||||||| | ||||||| |||||||||||| |||||    
T  48125225 gttggcttgggaccttggagtgtgctcctccgaaggtctcaggttcaattttccccggtgccaatttcggtgggc 48125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 10091187 - 10091300
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||| ||||| |    
T  10091187 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 10091286  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  10091287 agtccatacagagc 10091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 27009358 - 27009471
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || || ||   ||||||||||||||||  || |  |||||||||||| ||||| |    
T  27009358 acccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggcta 27009457  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  27009458 agtccatacagagc 27009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 42814874 - 42814935
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| | ||||||||||| |||||||||||| || ||||||  | |||||||||||||||    
T  42814874 gttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgatt 42814935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 2344298 - 2344370
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  ||| |||||| |||||||    
T  2344298 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgatt 2344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 7800034 - 7799962
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||| ||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 7799962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 17212052 - 17212164
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||| | ||||||| ||| |||||||||||| || |||||   ||||||||||||| ||| || |  |||||||||||| ||||| |    
T  17212052 acccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggcta 17212151  T
Q  122 agtccatgcagag 134  Q
    ||||||| |||||    
T  17212152 agtccatacagag 17212164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 37693732 - 37693692
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  37693732 ggatcttggagtgtgctcctcttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 39145854 - 39145802
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctc 76  Q
    |||||| |||||||| ||| ||||||||||| |||||||||||| || |||||    
T  39145854 acccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctc 39145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 19145612 - 19145501
Alignment:
Q  25 cccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaag 123  Q
    ||||| || ||||||||| ||||||||||| |||||||||||| || ||||||||||||||| ||||||||| || |  |||||||||||| ||||||||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaag 19145513  T
Q  124 tccatgcagagc 135  Q
    ||||| ||||||    
T  19145512 tccatacagagc 19145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 8780475 - 8780578
Alignment:
Q  26 ccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagt 124  Q
    |||| |||||||| ||| ||||||||| | ||||||||||||||| ||||||||||||||||||||||||| || |  ||| ||||||||||||| ||||    
T  8780475 ccatttgaggttgacctagtggttgacatcggatcttggagtgtgctcctctcaaggtctcaggttcgattgtctcttgtgtcaatttcgatgggtaagt 8780574  T
Q  125 ccat 128  Q
    ||||    
T  8780575 ccat 8780578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 25586927 - 25587040
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||||| |  |||||||||||| ||||| |    
T  25586927 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggcta 25587026  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  25587027 agtccatacagagc 25587040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 23270724 - 23270611
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || || ||  ||||||||| ||||||||||| ||  ||||||||||| ||||| |    
T  23270724 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggcta 23270625  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  23270624 agtccatacagagc 23270611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 32059642 - 32059529
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc-cccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| |  |  |||||||||||| ||||| |    
T  32059642 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggcta 32059543  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  32059542 agtccatacagagc 32059529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 36954813 - 36954885
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || ||||||  |||||||||||||||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgatt 36954885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 38631153 - 38631049
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||| ||||||| || |  |||||||||||||||||| |||||||| ||    
T  38631153 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccataca 38631054  T
Q  132 gagca 136  Q
    |||||    
T  38631053 gagca 38631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 2499370 - 2499275
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccat 128  Q
    ||||||| | |||| |||||| |||||||||| | || |||| |||| ||||||||||||||| ||||   || ||||||||||||||||||||||    
T  2499370 ggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattctccctgttgtcaatttcgatgggcaagtccat 2499275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 38684213 - 38684316
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||  ||||||||||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||    
T  38684213 ggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccataca 38684312  T
Q  132 gagc 135  Q
    ||||    
T  38684313 gagc 38684316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 10869757 - 10869695
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| |||||||||||||  ||||||||||| || |||||  ||||||||||||||||||    
T  10869757 ggttggcatggtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgatt 10869695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 15485471 - 15485421
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||| ||| ||| ||||||||||| |||||||||||||||||||||||||    
T  15485471 ggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgatt 15485421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 10824110 - 10824049
Alignment:
Q  75 tctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||||||| |||||||| || | ||||||||||||||||||||||||| | ||||||    
T  10824110 tctcaaggtctcaagttcgattatctctagtgccaatttcgatgggcaagtccttacagagc 10824049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 22392696 - 22392790
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggc 120  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||  |||  ||||||||||| |||||    
T  22392696 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt--ccctctgccaatttcggtgggc 22392790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 16173021 - 16172985
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16173021 cttggagtgtgctcctctcaaggtctcaggttcgatt 16172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 22253337 - 22253241
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcga-tttccccagtgccaatttcgatgggc-aagtccat 128  Q
    |||||| || ||||||| ||| ||||||| || | || ||||||| || |||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  22253337 ggttggtctagtggttggcttgggatctttgactttgctcctctctagatctcaggttcgactttctctagtgccaatttcgatgggctaagtccat 22253241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 13038656 - 13038541
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| |||||||  || |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||| ||||||| |    
T  13038656 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggcta 13038557  T
Q  122 agtccatgcagagcaa 137  Q
    ||| ||| ||||||||    
T  13038556 agttcatacagagcaa 13038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 13108651 - 13108536
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   || |||||||||||||| || |  |||||||||| ||||||| |    
T  13108651 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggcta 13108552  T
Q  122 agtccatgcagagcaa 137  Q
    ||| ||| ||||||||    
T  13108551 agttcatacagagcaa 13108536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 19883207 - 19883172
Alignment:
Q  64 gagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19883207 gagtgtgctcctctcaaggtctcaggttcgatttcc 19883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 33025475 - 33025538
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctca 87  Q
    |||||| || ||||||||| | ||||| ||| ||||||||||||||| |||||||||| |||||    
T  33025475 acccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcctctcaagatctca 33025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 39459326 - 39459389
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    ||||||| | || ||||||||||||||||||| |||| | || | |||||||||||||||||||    
T  39459326 ggttggcatagtagttgacttaggatcttggaatgtgcttctttaaaggtctcaggttcgattt 39459389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 27498933 - 27498827
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||| ||| ||||||| ||| | |||||||||| || ||||||  ||||||||||||||||| || |  |||||||||||| ||||| |    
T  27498933 acccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 27498834  T
Q  122 agtccat 128  Q
    |||||||    
T  27498833 agtccat 27498827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 31288138 - 31288076
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||  ||||||||| ||||||||    
T  31288138 ggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgatt 31288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 33709693 - 33709591
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||| |||||||| || |  |||||||||||| ||||| |||||||| ||    
T  33709693 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccataca 33709594  T
Q  132 gag 134  Q
    |||    
T  33709593 gag 33709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 11926704 - 11926591
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| |||||||  || |||||||||||| || |||||   |||||||||||| |||| || |  |||||||||||| ||||| |    
T  11926704 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggcta 11926605  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  11926604 agtccatacagagc 11926591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 15641307 - 15641194
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || |||| |||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||| ||||| |    
T  15641307 acccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggcta 15641208  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  15641207 agtccatacagagc 15641194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 15971314 - 15971249
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    ||||||| | ||||||| ||| |||||||||||| || |||||   ||||||||||||||||||||    
T  15971314 ggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcc 15971249  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 18207234 - 18207315
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcagagc 135  Q
    |||||||||||| || |||||   ||||||||||||||||| || || |||||||||||| ||||| |||||||| ||||||    
T  18207234 ggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagc 18207315  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 36895452 - 36895525
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    ||||||||||||||| |||||||||||| ||| |||||||| || |  || ||||||||| ||| |||||||||    
T  36895452 ggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccat 36895525  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 40330627 - 40330696
Alignment:
Q  23 cacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttc 92  Q
    ||||||| |||||||||| | ||||||  |||  ||||||||||| || |||||||||||||||| ||||    
T  40330627 cacccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttc 40330696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 14656681 - 14656645
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||| || |||||||||||||||||||||||||    
T  14656681 cttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16457819 - 16457902
Alignment:
Q  33 aggttggcctggtgg--ttgacttaggatcttggagtgtgttcct-ctcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    |||||||||||||||  ||| ||| ||| ||||||||||| |||| |||||||||||| |||| ||| ||||| ||||||||||    
T  16457819 aggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaattt 16457902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 8192555 - 8192448
Alignment:
Q  22 acacccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||||| || ||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| || |  |||||||| ||| |||||    
T  8192555 acacccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggc 8192456  T
Q  121 aagtccat 128  Q
    ||||||||    
T  8192455 aagtccat 8192448  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 4618877 - 4618782
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc-agtgccaatttcgatgggcaagtccat 128  Q
    ||||||||| ||||||| ||| | |||||||||| || |||||||||||| |||||||||||||||||  ||||||||||||  ||||||||||||    
T  4618877 ggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccat 4618782  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 19606046 - 19605936
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaa 122  Q
    ||||||||| ||||| ||| ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||| || | | ||| ||||||| |||||||    
T  19606046 acccatctg-ggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaa 19605948  T
Q  123 gtccatgcagag 134  Q
    |||||| |||||    
T  19605947 gtccatacagag 19605936  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 28194303 - 28194220
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccatgcagagcaaa 138  Q
    ||||||||||||||| |||||| ||||||| |||||||||| || |  |||||||||||| ||||||||||||| |||||||||    
T  28194303 ggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggcaagtccatacagagcaaa 28194220  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 18708492 - 18708542
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  18708492 gtggttgaattgggatcttggagtgtgttcctctcaaggtctcaggttcga 18708542  T

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Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 3405343 - 3405249
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    |||| ||| ||||||||||| |||||||||| |||| || |||||||||| ||||||||||| || |  ||||||||||  ||||||||||||||    
T  3405343 gttgacctagtggttgacttgggatcttggaatgtgctcatctcaaggtcacaggttcgattccctctggtgccaattttaatgggcaagtccat 3405249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 40591211 - 40591293
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggttcgatttc-cccagtgccaatttcgatgggcaagtccatgcagagcaaa 138  Q
    |||||||||||||| ||||||||| |||||||||| ||||||  |  ||| |||||||| ||||||||||||| |||||||||    
T  40591211 gatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccatacagagcaaa 40591293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 15037954 - 15038067
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||||||  |||||||||||| || |||||  |||||||||||||||||| ||    |||||||||||| ||||| |    
T  15037954 acccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggcta 15038053  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  15038054 agtccatacagagc 15038067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 25293161 - 25293258
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||| ||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| |||||    
T  25293161 acccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggc 25293258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 26176388 - 26176289
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccatgcag 132  Q
    ||||||||||||| ||||||| ||| ||||| ||||| ||||||||||||||||| ||||||| ||||  |||||||||| | ||| | ||||||| |||    
T  26176388 ggttggcctggtg-ttgacttgggaccttggggtgtgctcctctcaaggtctcagattcgattctccctggtgccaattttggtggcctagtccatacag 26176290  T

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Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 26482102 - 26482185
Alignment:
Q  33 aggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttc 113  Q
    ||||||||||| ||||  || ||| ||| || |||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  26482102 aggttggcctgatggtgttggcttgggacctaggagtgtgctcctctcaaggtctcaggttcgattctcctcagtgccaatttc 26482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 6099570 - 6099495
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    ||||| ||| ||| ||||||||||| ||||||||||||||||||||||||| |||||  ||||||| ||| |||||    
T  6099570 ggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccccgctgccaatatcggtgggc 6099495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 19525576 - 19525493
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccat 128  Q
    ||||| ||| |||||||| |||||||| |||||||| |||||||||||||| || |  |||||||||| | |||||||||||||    
T  19525576 ggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccat 19525493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 36179881 - 36179976
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccat 128  Q
    |||||| |||||| || ||||||||||||||||| | ||| |||| |||||||| |||||||| ||||   || |||||||||| |||||||||||    
T  36179881 ggttggtctggtgattaacttaggatcttggagttttttcatctcgaggtctcatgttcgattctccctgatgtcaatttcgataggcaagtccat 36179976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 30467032 - 30466919
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| |||||||  || |||| ||||||| |||||||||  ||||||||||||||||| || |   ||||||||||| ||||| |    
T  30467032 acccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggcta 30466933  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  30466932 agtccatacagagc 30466919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 32526276 - 32526215
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| | |||||||| || |||||||| ||| || |||||||||||||||||||||||||    
T  32526276 gttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgatt 32526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 33827775 - 33827662
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||  || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  33827775 acccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggcta 33827676  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  33827675 agtccatacagagc 33827662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 44026897 - 44026848
Alignment:
Q  75 tctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagt 124  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| |||||    
T  44026897 tctcaaggtctcaagttcgattcccccagtgccaatttcaatggacaagt 44026848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 38341754 - 38341809
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc 101  Q
    ||||||||| |||||||| ||| || ||||||||||||||||| ||||||| ||||    
T  38341754 ggttgacttgggatcttgaagtttgctcctctcaaggtctcagattcgattccccc 38341809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 40997552 - 40997461
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc-agtgccaatttcg 114  Q
    |||||| |||||| || || ||||||||||| |||||||||||| || |||||  ||||||||| |||| ||| |||| ||| |||||||||    
T  40997552 acccatttgaggtgggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcg 40997461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 4852563 - 4852625
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||| ||| ||||||||||| | |||||||||| || |||||  ||||||||||||||||||    
T  4852563 ggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgatt 4852625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 14946785 - 14946847
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    |||||||| |||||||||||  ||||||| ||| || |||||||||||| | |||||||||||    
T  14946785 gttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgattt 14946847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 16525217 - 16525271
Alignment:
Q  61 ttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    ||||||||||   ||||||||||||||||||||||| ||||| ||||||||||||    
T  16525217 ttggagtgtgcgactctcaaggtctcaggttcgattctccccggtgccaatttcg 16525271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 18976627 - 18976537
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcg 114  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||| |||||||| || | | ||||||||||    
T  18976627 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgagccaatttcg 18976537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 20297558 - 20297632
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatctt-ggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    |||||| || ||||||||  ||||||| ||| ||||||| ||| |||| ||||||||||||||||| ||||||||    
T  20297558 acccatttggggttggcccagtggttggcttgggatctttggaatgtgctcctctcaaggtctcagattcgattt 20297632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 27290598 - 27290696
Alignment:
Q  39 gcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcagagc 135  Q
    |||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| ||  | |||||||||||| ||||| |||||||| ||||||    
T  27290598 gcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagc 27290696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 10582172 - 10582079
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcagagc 135  Q
    ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||||||    
T  10582172 gtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc 10582079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 4893083 - 4893119
Alignment:
Q  33 aggttggcctggtggttgacttaggatcttggagtgt 69  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  4893083 aggttagcctggtggttgacttgggatcttggagtgt 4893119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 6007080 - 6007032
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggt 83  Q
    ||||| |||||||||||||| | ||||||||||||| | ||||||||||    
T  6007080 gttggtctggtggttgacttggaatcttggagtgtgcttctctcaaggt 6007032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 18825382 - 18825434
Alignment:
Q  63 ggagtgtgttcctctcaaggtctcaggttcga-tttccccagtgccaatttcg 114  Q
    |||||||| |||||||||||||||| ||| || ||||||| ||||||||||||    
T  18825382 ggagtgtgctcctctcaaggtctcaagtttgattttccccggtgccaatttcg 18825434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 44946255 - 44946183
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  44946255 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 44946183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 8479308 - 8479413
Alignment:
Q  25 cccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaag 123  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||| |||||| ||| | ||||||||||||||| |  ||| |||||||| ||||||||    
T  8479308 cccatttggggttggcctagtggttgacttgggatcttggagtgtgctcctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggcaag 8479407  T
Q  124 tccatg 129  Q
    ||||||    
T  8479408 tccatg 8479413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 9208279 - 9208359
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc-agtgccaatttcgatgggcaagtccatgcagagc 135  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||  |||||||||||| ||||||||||||| ||||||    
T  9208279 ggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtccatacagagc 9208359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 33499469 - 33499537
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttc 92  Q
    |||||| || ||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  33499469 acccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 15360300 - 15360187
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  15360300 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 15360201  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  15360200 agtccatacagagc 15360187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 6691616 - 6691533
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    |||||||||||||||  ||||||  || ||||||||||| ||||||||||||||||||||||||| || || ||||||||||||    
T  6691616 ggttggcctggtggtgttgactttagaccttggagtgtgctcctctcaaggtctcaggttcgattctctccggtgccaatttcg 6691533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 17149626 - 17149546
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |  |||| ||||||| | ||||||||||| ||||||    
T  17149626 ggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagc 17149546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 28742021 - 28741971
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  28742021 ggttgacctgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 28741971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 12591632 - 12591745
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||  ||||| |    
T  12591632 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggcta 12591731  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  12591732 agtccatacagagc 12591745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13564957 - 13564993
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  13564957 atcttggagtgtgttcctctcaaggtctcaggttcga 13564993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 11448876 - 11448979
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||    
T  11448876 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccataca 11448975  T
Q  132 gagc 135  Q
    ||||    
T  11448976 gagc 11448979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 5360262 - 5360160
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcag 132  Q
    |||||||||||||||| ||| |||||||||||| || | |||   ||||||||||||||||| || | | ||||||||||| ||||| |||||||| |||    
T  5360262 gttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacag 5360163  T
Q  133 agc 135  Q
    |||    
T  5360162 agc 5360160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 28028540 - 28028629
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    |||||||||||||||  |||||| ||| ||| ||||| | |||||||||||||||| |||||||| ||||   |||||||||||||||||    
T  28028540 ggttggcctggtggtgttgacttgggacctttgagtgagctcctctcaaggtctcatgttcgattctccctgatgccaatttcgatgggc 28028629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 654336 - 654235
Alignment:
Q  36 ttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcaga 133  Q
    ||||||| |||| |||||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||||    
T  654336 ttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaga 654237  T
Q  134 gc 135  Q
    ||    
T  654236 gc 654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 9238970 - 9239042
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  9238970 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 9239042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13569512 - 13569548
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    |||||||||| ||||||||||||||||||||||||||    
T  13569512 atcttggagtttgttcctctcaaggtctcaggttcga 13569548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13574058 - 13574094
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13574058 atcttagagtgtgttcctctcaaggtctcaggttcga 13574094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13576597 - 13576633
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13576597 atcttagagtgtgttcctctcaaggtctcaggttcga 13576633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 13579743 - 13579779
Alignment:
Q  58 atcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    ||||||||||||||||||||||||||||| |||||||    
T  13579743 atcttggagtgtgttcctctcaaggtctccggttcga 13579779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 28672062 - 28672134
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| |||||||||||  ||||||||||| || ||||||  |||||| ||||||||||    
T  28672062 acccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgatt 28672134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 6164337 - 6164423
Alignment:
Q  45 tggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    |||||||||| |||||||||||||||     ||||||||||||||||||| | || | || || ||||||||| ||||||||||| ||||||    
T  6164337 tggttgacttgggatcttggagtgtg-----ctcaaggtctcaggttcgactccctctagcgctaatttcgataggcaagtccatacagagc 6164423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 12234574 - 12234484
Alignment:
Q  33 aggttggcctggtggt--tgacttaggatcttggagtgtgttcc-tctcaaggtctcaggttcgatt-tccccagtgccaatttcgatggg 119  Q
    ||||||||||||||||  |||||| ||| || |||||||| ||| |||| ||||||||||||||||| || |||||| |||||| ||||||    
T  12234574 aggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatggg 12234484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 10377743 - 10377815
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggttcgatttcccca--gtgccaatttcgatgggcaagtccat 128  Q
    |||||||||||||| || | |||||||||||||||| | ||||| |  |||||||||||| |||||||||||||    
T  10377743 gatcttggagtgtgctcatgtcaaggtctcaggttc-aattccctatggtgccaatttcggtgggcaagtccat 10377815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 3222836 - 3222724
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||| ||| || |||||  | |||||||||||||||| || |  |||||||||||| ||||| |    
T  3222836 acccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctcaga-ggtctcaggttcgattccctctggtgccaatttcggtgggcta 3222738  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  3222737 agtccatacagagc 3222724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 3433639 - 3433602
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgattt 97  Q
    |||||||| || ||||||||||||||||||||||||||    
T  3433639 cttggagtttgctcctctcaaggtctcaggttcgattt 3433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 6384053 - 6384008
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttc 92  Q
    |||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  6384053 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 6384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 9843943 - 9844008
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    |||||| || ||||||| ||| |||||||||||| || ||||||  ||||||||||||||| ||||    
T  9843943 ggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcc 9844008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 13753235 - 13753332
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||| ||| || |  |||||||||||| |||||    
T  13753235 acccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggc 13753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 34147341 - 34147454
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || || ||   | ||||||||||||||| || |  |||||||||||| ||||| |    
T  34147341 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggcta 34147440  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  34147441 agtccatacagagc 34147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 34159957 - 34160070
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || || ||   | ||||||||||||||| || |  |||||||||||| ||||| |    
T  34159957 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggcta 34160056  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  34160057 agtccatacagagc 34160070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 11007180 - 11007232
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| ||| |||||||||||| || |||||  ||||||||||||||||||    
T  11007180 gtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 11007232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 22576062 - 22576134
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||| |||||||    
T  22576062 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgatt 22576134  T

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Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 24216973 - 24217045
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

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Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 32729540 - 32729652
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccca--gtgccaatttcgatgggca 121  Q
    |||||| || ||||||||| ||||||| ||| ||||||| |||| || ||||||||| ||||||||||||| ||||| |  |||||||||||| ||||||    
T  32729540 acccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcga-ttccctatggtgccaatttcggtgggca 32729638  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  32729639 agtccatacagagc 32729652  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 46607805 - 46607918
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||||||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  46607805 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 46607904  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  46607905 agtccatacagagc 46607918  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 1138574 - 1138686
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcg-atttccccagtgccaatttcgatgggcaa 122  Q
    |||||| || ||||| ||| ||||||| |||  |||||||||||||| |||||||||||||| ||||||| || || | ||||||||||||| ||| |||    
T  1138574 acccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggacaa 1138673  T
Q  123 gtccatgcagagc 135  Q
    |||||| ||||||    
T  1138674 gtccatacagagc 1138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 25237159 - 25237080
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagag 134  Q
    |||||||||||| || | ||||||||||||||||||||||| || | ||||||||||||| ||||||||||||| |||||    
T  25237159 ggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccatacagag 25237080  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 809217 - 809322
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc-agtgccaatttcgatgggcaa 122  Q
    ||||||||  ||||||||| |||||||  || |||||||||||| |  |||||| ||||||||||||| |||| |||| |||| |||||||| |||||||    
T  809217 acccatctagggttggcctcgtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggcaa 809316  T
Q  123 gtccat 128  Q
    ||||||    
T  809317 gtccat 809322  T

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Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 52135135 - 52135229
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtcca 127  Q
    |||||| || ||||||||||| |||||||||||| || || |||||| ||||||||||||||| || | |||||||||| || ||||||| ||||    
T  52135135 ggttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgattatctctagtgccaattccggtgggcaaatcca 52135229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 1486415 - 1486525
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaa 122  Q
    |||||| || ||||| ||| ||||||| ||| |||||||||||||   | ||||||||||||||||||||||| ||    ||||||||||||||||| ||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggagtgc--tactctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaa 1486512  T
Q  123 gtccatgcagagc 135  Q
    |||||| ||||||    
T  1486513 gtccatacagagc 1486525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 4621439 - 4621326
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  4621439 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 4621340  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  4621339 agtccatacagagc 4621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 8077642 - 8077755
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  8077642 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 8077741  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  8077742 agtccatacagagc 8077755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 24674388 - 24674501
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  24674388 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 24674487  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  24674488 agtccatacagagc 24674501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 19034556 - 19034476
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    |||||||||||| ||||||||  ||||| |||||||||||| || |  |||||||||||| ||||||||||||| ||||||    
T  19034556 ggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggcaagtccatacagagc 19034476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 7197448 - 7197346
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggcaa 122  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || | | ||||||||||| |||| ||    
T  7197448 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggtaa 7197349  T
Q  123 gtc 125  Q
    |||    
T  7197348 gtc 7197346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 19480552 - 19480618
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccc-cagtgccaattt 112  Q
    |||||||| ||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||||||    
T  19480552 gttgacttgggatcttggagtgtgctcctctcaaggtctcacattcgattccccgcggtgccaattt 19480618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 15059604 - 15059491
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| | |||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  15059604 acccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggcta 15059505  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  15059504 agtccatacagagc 15059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 39714829 - 39714748
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtcca 127  Q
    |||| ||| ||||||||||||||| |||||||||||||||| ||| |||| ||| | ||||| |||||| ||||| ||||||    
T  39714829 gttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattctcctcggtgccgatttcggtgggctagtcca 39714748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 44417499 - 44417446
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttc 113  Q
    ||||||||||| | |||||||||||||||||| |||| |||| |||||||||||    
T  44417499 cttggagtgtgctgctctcaaggtctcaggtttgattcccccggtgccaatttc 44417446  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 10059065 - 10059161
Alignment:
Q  39 gcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaagtccatgcagag 134  Q
    |||| |||||||||||  ||||||||||| || ||||||||| ||||||||||  ||| || | | || |||||||||||||||||| ||| |||||    
T  10059065 gcctagtggttgacttgagatcttggagtttgctcctctcaaagtctcaggtttaattctctctaatgtcaatttcgatgggcaagttcatacagag 10059161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 17935784 - 17935876
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc-cccagtgccaatttcgatgggc-aagtccatgcagag 134  Q
    ||||||||||| |||||||||||| || |||||   ||||||||||||||||| |  | ||||||||||||| ||||| |||||||| |||||    
T  17935784 gtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagag 17935876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 29057539 - 29057427
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaa 122  Q
    |||||| || ||||||||| |||||||  || |||||||||||| || | |||  |||||||||||||||||| || |  ||||||||||||||||  ||    
T  29057539 acccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttcgatggtaaa 29057440  T
Q  123 gtccatgcagagc 135  Q
    ||| || ||||||    
T  29057439 gtctatacagagc 29057427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 1378893 - 1378968
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    |||||| | |||||||| | ||||||||||| |||||||||||| || |||||  || |||||| |||||||||||    
T  1378893 acccatttaaggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcc 1378968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 9926327 - 9926288
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctc 86  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  9926327 gttgacttgggatcttggagtgtgctcctctcaaggtctc 9926288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 38939226 - 38939301
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    ||||| ||| ||| ||||||||||| ||||||||||||||| |||| |||| |||||| || |||||||| |||||    
T  38939226 ggttggcttgggaccttggagtgtgctcctctcaaggtctctggtttgattctccccaatgtcaatttcggtgggc 38939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 41470648 - 41470581
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatttccc-cagtgccaatttcgatgggcaagtcc 126  Q
    |||||||| || |||||||||||||||| |||||||| ||| |||||||||||||  ||||| |||||    
T  41470648 cttggagtatgctcctctcaaggtctcaagttcgattccccacagtgccaatttcagtgggctagtcc 41470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 15581207 - 15581118
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    |||||||||||||||  || ||| ||| ||||||||||| |||||| |||||||||||||| ||| ||||| ||||  |||||| |||||    
T  15581207 ggttggcctggtggtgttggcttgggaccttggagtgtgctcctctaaaggtctcaggttcaattctccccggtgctgatttcggtgggc 15581118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 23439914 - 23439880
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    ||||||||||||||||||||| |||||||||||||    
T  23439914 cttggagtgtgttcctctcaatgtctcaggttcga 23439880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 34228915 - 34228965
Alignment:
Q  63 ggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    ||||||||||||||||||||||||||||| |||| || || ||||||||||    
T  34228915 ggagtgtgttcctctcaaggtctcaggttggattctctccggtgccaattt 34228965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 37047010 - 37047064
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcccc 101  Q
    |||| ||| ||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccc 37047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 39012316 - 39012398
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccc-cagtgccaatttcgatgggcaagtccat 128  Q
    |||| ||| ||| ||||||||||| || ||||||||||| ||||| |||| ||| | |||||||||||| ||||| |||||||    
T  39012316 gttggcttgggaccttggagtgtgctcttctcaaggtcttaggtttgattcccctcggtgccaatttcggtgggctagtccat 39012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 6128024 - 6127971
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    ||||||| ||| |||||||||||||||| |||||||| ||||| ||||||||||    
T  6128024 cttggagcgtgctcctctcaaggtctcaagttcgattctccccggtgccaattt 6127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 7578419 - 7578476
Alignment:
Q  39 gcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||| ||||||| ||| |||||||||||| ||||||||   |||||||||||||||||    
T  7578419 gcctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgatt 7578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 27223180 - 27223131
Alignment:
Q  48 ttgacttaggatcttggagtgtgttcctct-caaggtctcaggttcgatt 96  Q
    |||||||||||||| |||||||| || ||| |||||||||||||||||||    
T  27223180 ttgacttaggatctgggagtgtgctcttcttcaaggtctcaggttcgatt 27223131  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 39964543 - 39964604
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    ||||||||||| |||||||||||||||||||| |||| || |  |||||||||||| |||||    
T  39964543 cttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggc 39964604  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 40810501 - 40810542
Alignment:
Q  56 ggatcttggagtgtgttcctct-caaggtctcaggttcgatt 96  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  40810501 ggatctgggagtgtgttcctcttcaaggtctcaggttcgatt 40810542  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 45266889 - 45266934
Alignment:
Q  76 ctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||    
T  45266889 ctcaaggtctcaggttcgattctccccggtgccaatttggatgggc 45266934  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 16539635 - 16539715
Alignment:
Q  56 ggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||||||| | ||||  |||||||||||||| |||| || |  |||||||||| | ||||||||||||| ||||||    
T  16539635 ggatcttggagtgagctccttgcaaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagc 16539715  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 27455068 - 27454996
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  27455068 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 27454996  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 34778337 - 34778409
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||| ||||    
T  34778337 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 34778409  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 40802269 - 40802157
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaa 122  Q
    |||||| || ||||||| | ||||||| |||  ||| ||||||| || || ||||||||||||| ||| |||| |||   |||||||||| |||| ||||    
T  40802269 acccatttggggttggctttgtggttggcttgagatattggagtttgctcatctcaaggtctcatgtttgattctccatggtgccaattttgatgagcaa 40802170  T
Q  123 gtccatgcagagc 135  Q
    |||||| ||||||    
T  40802169 gtccatacagagc 40802157  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 43983743 - 43983707
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||||||||||||||| |||||| |||||    
T  43983743 cttggagtgtgttcctctcaaggtttcaggtacgatt 43983707  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 44486195 - 44486135
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatggg 119  Q
    ||||||||||| ||||||||||||||||  ||| ||| ||||| |||||||||||| ||||    
T  44486195 cttggagtgtgctcctctcaaggtctcaaattcaattctccccggtgccaatttcggtggg 44486135  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 15974914 - 15975004
Alignment:
Q  33 aggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagt 124  Q
    |||||||||| |||||| |||| |||||||||||| || |||||||||||||||| |||||||| ||| ||||| ||||||| |||||||||    
T  15974914 aggttggcctagtggtt-acttgggatcttggagtatgctcctctcaaggtctcaagttcgattcccctagtgcaaatttcggtgggcaagt 15975004  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 34639388 - 34639297
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||| |||||  | |  |||||||||||| |||| |||||||| ||||||    
T  34639388 gtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgatccctctggtgccaatttcggtgggtaagtccatacagagc 34639297  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 26169040 - 26168938
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggcaagtccatgcag 132  Q
    ||||||||| ||||||  ||| |||||||||||| || |||||||||||||||||||| |||| | || | ||||||||||| ||||||||| ||| |||    
T  26169040 ggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggcaagttcatacag 26168941  T
Q  133 agc 135  Q
    |||    
T  26168940 agc 26168938  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 41070770 - 41070832
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||||||||| ||||||||    
T  41070770 ggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgatt 41070832  T

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Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 3734825 - 3734712
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  3734825 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 3734726  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  3734725 agtccatacagagc 3734712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 42643320 - 42643207
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||||||| |||||||||||| || |||||   ||||||||| ||||||| || | ||||||||||||| ||||| |    
T  42643320 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggcta 42643221  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  42643220 agtccatacagagc 42643207  T

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Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 40137013 - 40136935
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagtc 125  Q
    |||| ||| ||| ||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||| ||||| ||||    
T  40137013 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattctcccggtgccaatttcggtgggctagtc 40136935  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 34237857 - 34237744
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  34237857 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 34237758  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  34237757 agtccatacagagc 34237744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 18532106 - 18532217
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || ||| || |||||||| ||||| |    
T  18532106 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggcta 18532205  T
Q  122 agtccatgcaga 133  Q
    ||||||| ||||    
T  18532206 agtccatacaga 18532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 4718644 - 4718757
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctca-aggtctcaggttcgatttcc-ccagtgccaatttcgatgggc- 120  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||| ||| ||||||||||||||||| || |  |||||||||||| |||||     
T  4718644 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtgggct 4718742  T
Q  121 aagtccatgcagagc 135  Q
    |||||||| ||||||    
T  4718743 aagtccatacagagc 4718757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 21239359 - 21239453
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcga-tttccccagtgccaatttcgatgggcaagtccat 128  Q
    |||||| | ||||||| |||  ||||||||||||||||||| ||||||| ||| ||| || ||||||  |||||||||||| |||||| ||||||    
T  21239359 gttggcttagtggttggcttgcgatcttggagtgtgttcctttcaaggtttcaagtttgattttccctggtgccaatttcggtgggcatgtccat 21239453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 34694768 - 34694706
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || |||||||||||  ||||||||||| || |||||||||||||| ||||||||||    
T  34694768 ggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgatt 34694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 8387636 - 8387535
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcag 132  Q
    ||||||||| ||||||| |||  |||||| |||| || | |||||| ||||||| ||||||||||| |  |||||||||| | ||||||||||||| |||    
T  8387636 ggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctctggtgccaattttggtgggcaagtccatacag 8387537  T
Q  133 ag 134  Q
    ||    
T  8387536 ag 8387535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 39349255 - 39349368
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||  ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  39349255 acccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 39349354  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  39349355 agtccatacagagc 39349368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 6530817 - 6530896
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaat 110  Q
    |||||||||||||||  || ||| ||| || |||||||| ||||||||| ||||||||||||||| ||||| ||||||||    
T  6530817 ggttggcctggtggtgttggcttgggacctaggagtgtgctcctctcaatgtctcaggttcgattctccccggtgccaat 6530896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 28088285 - 28088357
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||||| ||||||| | ||||||||||| |||||||||||| ||||| ||   ||||||||| |||||||    
T  28088285 acccatctggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgatt 28088357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 13749077 - 13749155
Alignment:
Q  46 ggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagt 124  Q
    ||||||||| |||| ||||||| || |||||||||||| |||||||||||||||  | |||||||||| | |||||||||    
T  13749077 ggttgacttgggat-ttggagtctgctcctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagt 13749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 24018401 - 24018456
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    ||||||||||| |||||||||||| || |||||  ||||||| |||||||||||||    
T  24018401 gtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcc 24018456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 27746527 - 27746424
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| |||||||  || |||||||||||| || |||||  |||||||||||||||||| ||    |||||||||||| ||||| |||||||| ||    
T  27746527 ggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccataca 27746428  T
Q  132 gagc 135  Q
    ||||    
T  27746427 gagc 27746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 28193483 - 28193586
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatggg-caagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||  |||||||| ||    
T  28193483 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccataca 28193582  T
Q  132 gagc 135  Q
    ||||    
T  28193583 gagc 28193586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 33585820 - 33585754
Alignment:
Q  33 aggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc 99  Q
    |||||||||| |||||||  ||  |||||| ||||||| ||||||||| || |||||||||||||||    
T  33585820 aggttggcctagtggttggtttgagatcttagagtgtgctcctctcaaagtttcaggttcgatttcc 33585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 43594364 - 43594294
Alignment:
Q  52 cttaggatcttggagtgtgttcctc-tcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||| || | |||| |||||| |||||||    
T  43594364 cttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggc 43594294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 22200754 - 22200670
Alignment:
Q  31 tgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcga 115  Q
    ||||||||||||| ||||||  || |||||||||||| |  | ||||||| ||||||||||||||| || | ||||||||||||||    
T  22200754 tgaggttggcctg-tggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaatttcga 22200670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 32879278 - 32879375
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||| || |||||| || ||||||||||| ||||||| |||| || |||||   ||||||||||||||||| || |  |||||||||||| |||||    
T  32879278 acccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 32879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 34778773 - 34778850
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatttccc-cagtgccaatttcgatgggcaagtccatgcagagca 136  Q
    |||| |||||| |||| ||||||||||| ||| ||||| || | |||||||||||| ||||| ||||||| |||||||    
T  34778773 cttgcagtgtgctcctttcaaggtctcaagtttgattttccacggtgccaatttcggtgggctagtccatacagagca 34778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 39317026 - 39317087
Alignment:
Q  31 tgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttc 92  Q
    ||||||||| || |||||||||||  ||| |||||||||| | |||||||| ||||||||||    
T  39317026 tgaggttggtctagtggttgacttgagatattggagtgtgcttctctcaagctctcaggttc 39317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 3794811 - 3794859
Alignment:
Q  45 tggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcg 93  Q
    |||||| |||||||||||| ||| || |||||||||||||||| |||||    
T  3794811 tggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcg 3794859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 19471608 - 19471680
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||| ||||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 19471680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 19542532 - 19542604
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||| ||||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 19542604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 19590164 - 19590092
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||| ||||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 19590092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 5284 - 5171
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  5284 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 5185  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  5184 agtccatacagagc 5171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 50582987 - 50583092
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggcaa 122  Q
    |||||| || ||||||||| |||||||  || |||||||||||| || |||||| ||||| ||||||||||||||| | | ||||||||||| |||| ||    
T  50582987 acccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcgttgggtaa 50583086  T
Q  123 gtccat 128  Q
    ||||||    
T  50583087 gtccat 50583092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 48977383 - 48977455
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||||||| |||||||||||| || |||||  ||||||||||||||||||    
T  48977383 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 48977455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 50162058 - 50162150
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||||| |||||||| |||| | ||||||||||||||||| ||||||| || | | ||||||||| |||| |||||||||| ||||||    
T  50162058 gtggttgacttgggatcttgaagtgcgctcctctcaaggtctcagattcgattccctctattgccaattttgatgtgcaagtccatacagagc 50162150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 7485727 - 7485630
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggc 120  Q
    |||||| || ||||||| | ||||||||||| |||||||||||| || |||||  |||||||||||||||||| || | | ||||||||||| |||||    
T  7485727 acccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggc 7485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 25289916 - 25289803
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || | ||||||||||||| ||||| |    
T  25289916 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggcta 25289817  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  25289816 agtccatacagagc 25289803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 30257619 - 30257732
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||  |||||||||||||||||| ||    |||||||||||||||| | |    
T  30257619 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggacta 30257718  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  30257719 agtccatacagagc 30257732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 30807355 - 30807242
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  30807355 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 30807256  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  30807255 agtccatacagagc 30807242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 35492906 - 35493019
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  35492906 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 35493005  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  35493006 agtccatacagagc 35493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 45529956 - 45529843
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||||||||| |    
T  45529956 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggcta 45529857  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  45529856 agtccatacagagc 45529843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 4252598 - 4252526
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||| |||  |||||||||||||| |||||||||||||||| ||| ||||    
T  4252598 acccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgatt 4252526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 21362938 - 21363010
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||||||| |||||||||||| || |||||   |||||||||||||||||    
T  21362938 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 21363010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 34844409 - 34844485
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||||| ||||||||||||||||||||||||| || |||| |||||||||| ||| | ||| ||| ||||||    
T  34844409 cttggagtgtgctcctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagagc 34844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 36803142 - 36803066
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggcaa 122  Q
    |||| ||||| ||||||||||||| ||||||||| |||||| ||||||||||| || |||  |||||||||||||||    
T  36803142 gttggcttagaatcttggagtgtgctcctctcaaagtctcaagttcgatttcctccggtgttaatttcgatgggcaa 36803066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 15566691 - 15566588
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| |||  ||||||||||| || |||||   ||||||||||||||||| || | ||||||||||||| ||||| |||||||| ||    
T  15566691 ggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccataca 15566592  T
Q  132 gagc 135  Q
    ||||    
T  15566591 gagc 15566588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 42430360 - 42430426
Alignment:
Q  48 ttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    ||||||| ||||||||||||||| |||||||||||||| | |||||||| |||||| |||||||||||    
T  42430360 ttgacttgggatcttggagtgtgctcctctcaaggtctta-gttcgattctccccaatgccaatttcg 42430426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 42799813 - 42799751
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcga 94  Q
    |||||||||||||||  || ||| ||| ||||||||||| |||||||||||||||||||||||    
T  42799813 ggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcga 42799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 26174119 - 26174221
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatggg-caagtccatgcag 132  Q
    |||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||||| |  |||||||||||| ||||  |||||||| |||    
T  26174119 gttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacag 26174218  T
Q  133 agc 135  Q
    |||    
T  26174219 agc 26174221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 36660775 - 36660833
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttc 92  Q
    ||||| ||| |||||||  ||||||||||||||| || |||||||||||||||||||||    
T  36660775 ggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttc 36660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 52821826 - 52821724
Alignment:
Q  35 gttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcag 132  Q
    |||||||| ||||||||||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| || || |||||||| |||    
T  52821826 gttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacag 52821727  T
Q  133 agc 135  Q
    |||    
T  52821726 agc 52821724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 7470417 - 7470320
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||| || |||| |||| |||||||||||  ||||||||||| || |||||  |||||||||||||||||| || | | ||||||||||| |||||    
T  7470417 acccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggc 7470320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 8456352 - 8456239
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| ||||||| |||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |    
T  8456352 acccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggcta 8456253  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  8456252 agtccatacagagc 8456239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 26108299 - 26108400
Alignment:
Q  36 ttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgcaga 133  Q
    ||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaga 26108398  T
Q  134 gc 135  Q
    ||    
T  26108399 gc 26108400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 34492777 - 34492664
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccag-tgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||| |||||||| || | | ||||||||||| ||||| |    
T  34492777 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggcta 34492678  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  34492677 agtccatacagagc 34492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 40133651 - 40133538
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||| ||||||| || |||||  |||||||||||||||||| || |  ||| |||||||| ||||| |    
T  40133651 acccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggcta 40133552  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  40133551 agtccatacagagc 40133538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 46576343 - 46576456
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||  ||||| |    
T  46576343 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggcta 46576442  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  46576443 agtccatacagagc 46576456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 49258464 - 49258351
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || |||| |||| ||||||| ||| |||||||| ||| || |||||   ||||||||||||||||| || | ||||||||||||| ||||| |    
T  49258464 acccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggcta 49258365  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  49258364 agtccatacagagc 49258351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 15034355 - 15034438
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    |||||||||||||||  || ||| ||| ||||||| ||| ||||||||||||||||||||| ||| ||||  ||||||||||||    
T  15034355 ggttggcctggtggtgttgccttgggaccttggagggtgatcctctcaaggtctcaggttcaattctccctggtgccaatttcg 15034438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 40777052 - 40777112
Alignment:
Q  61 ttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    |||||||||| |||||||||||||||||||| |||| || | ||||||||||||| |||||    
T  40777052 ttggagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcggtgggc 40777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 25379766 - 25379869
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc-cccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| |  | |||||||||||||  |||| |||||||| ||    
T  25379766 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccataca 25379865  T
Q  132 gagc 135  Q
    ||||    
T  25379866 gagc 25379869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 32151429 - 32151516
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggc 120  Q
    ||||||||| ||||||||||| |||||||||||| || |||||  ||||| |||  ||||||| || | ||||||||||||| |||||    
T  32151429 ggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggc 32151516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 53424377 - 53424306
Alignment:
Q  25 cccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 53424306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 26158846 - 26158880
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggtt 91  Q
    |||||||||||||| ||||||||||||||||||||    
T  26158846 gatcttggagtgtgctcctctcaaggtctcaggtt 26158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 28835010 - 28834954
Alignment:
Q  60 cttggagtgtgttcctctcaaggtctcaggttcga---tttccccagtgccaatttc 113  Q
    |||||||||| ||||||||||||||||| ||||||   ||||||| |||||||||||    
T  28835010 cttggagtgtcttcctctcaaggtctcaagttcgaatctttccccggtgccaatttc 28834954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 35623317 - 35623255
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaa 109  Q
    |||| ||| ||| ||||||||||| |||||||||||||||| ||||||||  ||| |||||||    
T  35623317 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcgattcacccggtgccaa 35623255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 13175012 - 13174943
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcct-ctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    |||||||||||| ||||||||| |||||| |||||||||  |||||||||| |||||  |||||||||||    
T  13175012 gttgacttaggaccttggagtgcgttcctcctcaaggtccgaggttcgattctccccgatgccaatttcg 13174943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 18316564 - 18316500
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| ||||||||  || ||| ||| ||||||||||| |||||||||||||| ||||||||||    
T  18316564 ggttggtctggtggtgctggcttgggaccttggagtgtgctcctctcaaggtcttaggttcgatt 18316500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 29915450 - 29915397
Alignment:
Q  45 tggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc 98  Q
    |||||||||| |||||||||||| || |||||   |||||||||||||||||||    
T  29915450 tggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttc 29915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 29964603 - 29964550
Alignment:
Q  45 tggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttc 98  Q
    |||||||||| |||||||||||| || |||||   |||||||||||||||||||    
T  29964603 tggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttc 29964550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 35053314 - 35053375
Alignment:
Q  57 gatcttggagtgtgttcctctcaaggtctcaggttcga-tttccccagtgccaatttcgatg 117  Q
    ||||||||||||||||| ||||||| | |||| ||| | |||||||| ||||||||||||||    
T  35053314 gatcttggagtgtgttcatctcaagatttcagattcaattttccccaatgccaatttcgatg 35053375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 39253707 - 39253772
Alignment:
Q  33 aggttggcctggtggtt-gacttaggatcttggagtgtgttcctct-caaggtctcaggttcgatt 96  Q
    |||||| ||| |||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||    
T  39253707 aggttgacctagtggttagacttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 39253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 40268514 - 40268587
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatggg 119  Q
    |||| ||| ||| ||||||||| | |||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  40268514 gttggcttgggaccttggagtgggctcctcttaaggtctcaggttcgattctccccgatgccaatttcggtggg 40268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 40940820 - 40940933
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || |||||| || ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| ||| | |    
T  40940820 acccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggacta 40940919  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  40940920 agtccatacagagc 40940933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 47454658 - 47454601
Alignment:
Q  57 gatcttggagtgtgttcctc-tcaaggtctcaggttcgatt-tccccagtgccaattt 112  Q
    |||||||||||||| ||||| || ||||||||||||||||| |||||| |||||||||    
T  47454658 gatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 47454601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 52455851 - 52455754
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc 120  Q
    |||||| || ||||||||| ||||||| ||  |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||| |||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggc 52455754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 53167827 - 53167754
Alignment:
Q  62 tggagtgtgttcctctcaaggtctcaggttcgatttccccagtgccaatttcgatgggcaagtccatgcagagc 135  Q
    ||||||||| | |||||||||||||| ||| |||| |||| |||||||||| | | ||| ||||||| ||||||    
T  53167827 tggagtgtgcttctctcaaggtctcaagtttgattaccccggtgccaattttggtaggccagtccatacagagc 53167754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 55371480 - 55371415
Alignment:
Q  31 tgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||| ||||||| |||  ||| ||||||| || | |||||||||||||| ||||||||    
T  55371480 tgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgatt 55371415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 31538040 - 31537988
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctc 76  Q
    |||||| || ||||||||| ||||||| |||||||||||||||| || |||||    
T  31538040 acccatttggggttggcctagtggttggcttaggatcttggagtttgctcctc 31537988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38732961 - 38733033
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| ||||||||| ||  |||||||||| | |||||||||| ||||||||   ||||||||||| |||||    
T  38732961 acccatttgaggttgggctaatggttgacttggaatcttggagtttgttcctccagaggtctcaggtccgatt 38733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 50731415 - 50731363
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||  ||||||| |||||| |||||||||||||||| ||| ||||    
T  50731415 gtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgatt 50731363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 50781439 - 50781491
Alignment:
Q  44 gtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||  ||||||| |||||| |||||||||||||||| ||| ||||    
T  50781439 gtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgatt 50781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 40320 - 40433
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctca-aggtctcaggttcgatttcc-ccagtgccaatttcgatgggc- 120  Q
    |||||| || ||||||||| ||||||| |||||||||||||||| || |||| ||| ||||||||||||||||| || |  |||||||||||| |||||     
T  40320 acccatttggggttggcctagtggttggcttaggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtgggct 40418  T
Q  121 aagtccatgcagagc 135  Q
    |||||||| ||||||    
T  40419 aagtccatacagagc 40433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 8609 - 8508
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt-tccccagtgccaatttcgatgggcaa 122  Q
    |||||| || ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  |||||||||||| |||||||    
T  8609 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggcaa 8510  T
Q  123 gt 124  Q
    ||    
T  8509 gt 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 97568 - 97455
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-a 121  Q
    |||||| || ||||||||| ||||||| ||| |||||||| ||| || |||||  |||||||||||||||||| || |  |||||||||||| ||||| |    
T  97568 acccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggcta 97469  T
Q  122 agtccatgcagagc 135  Q
    ||||||| ||||||    
T  97468 agtccatacagagc 97455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 29332 - 29272
Alignment:
Q  36 ttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    ||||||| ||||||| ||| | |||||| ||||||||||||||||||||| ||||||||||    
T  29332 ttggcctagtggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgatt 29272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 41846 - 41774
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || ||||||||| ||||||||||| |||||||||||| || |||||   |||||||||||||||||    
T  41846 acccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 41774  T

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Target: scaffold0459 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 10885 - 10782
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||||| |  | |||||||||| ||||| |||||||| ||    
T  10885 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccataca 10786  T
Q  132 gagc 135  Q
    ||||    
T  10785 gagc 10782  T

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Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 12192 - 12089
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   |||||||||||||||||||| |  | |||||||||| ||||| |||||||| ||    
T  12192 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccataca 12093  T
Q  132 gagc 135  Q
    ||||    
T  12092 gagc 12089  T

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Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 9491 - 9388
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||| ||||| |||||||| ||    
T  9491 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccataca 9392  T
Q  132 gagc 135  Q
    ||||    
T  9391 gagc 9388  T

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Target: scaffold0623 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 1248 - 1145
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| ||||||| ||| |||||||||||| || |||||   ||||||||||||||||| || |  | |||||||||| ||||| |||||||| ||    
T  1248 ggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccataca 1149  T
Q  132 gagc 135  Q
    ||||    
T  1148 gagc 1145  T

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Target: scaffold0217 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 7501 - 7398
Alignment:
Q  34 ggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatttcc-ccagtgccaatttcgatgggc-aagtccatgca 131  Q
    ||||||||| || |||| ||| |||||||||||| || |||||   || |||||||||||||| || || |||||||||||| ||||| |||||||| ||    
T  7501 ggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccataca 7402  T
Q  132 gagc 135  Q
    ||||    
T  7401 gagc 7398  T

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Target: scaffold0189 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 17789 - 17725
Alignment:
Q  34 ggttggcctggtggt--tgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||||||||||||  || | || || ||||||||||  |||||||||||||||||||||||||    
T  17789 ggttggcctggtggtattggcgtaagaccttggagtgttctcctctcaaggtctcaggttcgatt 17725  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 131976 - 132045
Alignment:
Q  47 gttgacttaggatcttggagtgtgttcct-ctcaaggtctcaggttcgatt-tccccagtgccaatttcg 114  Q
    |||||||||||| ||||||||| |||||| |||||||||  |||||||||| |||||  |||||||||||    
T  131976 gttgacttaggaccttggagtgcgttcctcctcaaggtccgaggttcgattctccccgatgccaatttcg 132045  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 27771 - 27843
Alignment:
Q  24 acccatctgaggttggcctggtggttgacttaggatcttggagtgtgttcctctcaaggtctcaggttcgatt 96  Q
    |||||| || |||||| || |||||||  || |||| ||||||| || ||||||||||||||| |||||||||    
T  27771 acccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgatt 27843  T

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