View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11945_high_4 (Length: 395)

Name: NF11945_high_4
Description: NF11945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11945_high_4
NF11945_high_4
[»] chr2 (51 HSPs)
chr2 (1-381)||(2911172-2911552)
chr2 (1-381)||(31091211-31091588)
chr2 (91-381)||(24459138-24459429)
chr2 (1-381)||(40000019-40000395)
chr2 (74-381)||(39015136-39015444)
chr2 (182-381)||(32765964-32766164)
chr2 (1-309)||(32765000-32765305)
chr2 (1-309)||(24458122-24458428)
chr2 (1-309)||(2910162-2910468)
chr2 (1-308)||(14704068-14704363)
chr2 (107-309)||(31090321-31090525)
chr2 (74-316)||(39016142-39016375)
chr2 (1-261)||(7073701-7073969)
chr2 (92-262)||(17330023-17330193)
chr2 (202-310)||(38984746-38984857)
chr2 (204-309)||(39256769-39256876)
chr2 (100-220)||(5914858-5914978)
chr2 (92-192)||(43380736-43380836)
chr2 (1-136)||(32766168-32766300)
chr2 (99-207)||(31443084-31443192)
chr2 (198-251)||(33162020-33162073)
chr2 (101-201)||(12003745-12003845)
chr2 (118-190)||(21733627-21733699)
chr2 (154-244)||(8420747-8420842)
chr2 (343-381)||(14705059-14705097)
chr2 (108-190)||(21732280-21732362)
chr2 (103-264)||(39999110-39999259)
chr2 (202-275)||(43380823-43380897)
chr2 (186-262)||(31442614-31442691)
chr2 (204-261)||(33163258-33163315)
chr2 (108-184)||(12010224-12010300)
chr2 (1-49)||(21733784-21733832)
chr2 (182-261)||(12004762-12004841)
chr2 (1-48)||(17330244-17330291)
chr2 (1-48)||(17466842-17466889)
chr2 (195-275)||(7412536-7412617)
chr2 (100-145)||(36012724-36012769)
chr2 (100-164)||(12396162-12396226)
chr2 (1-49)||(34037686-34037734)
chr2 (204-262)||(12003869-12003928)
chr2 (1-48)||(33161829-33161876)
chr2 (109-164)||(37607288-37607343)
chr2 (198-241)||(43381020-43381062)
chr2 (120-194)||(12004849-12004923)
chr2 (102-144)||(14886636-14886678)
chr2 (118-183)||(11985865-11985930)
chr2 (91-184)||(33161936-33162029)
chr2 (99-184)||(33163320-33163405)
chr2 (118-197)||(39256868-39256949)
chr2 (119-171)||(18676698-18676750)
chr2 (166-226)||(31814196-31814256)
[»] chr5 (31 HSPs)
chr5 (1-387)||(25590492-25590875)
chr5 (74-381)||(28590797-28591105)
chr5 (78-381)||(40611395-40611699)
chr5 (74-381)||(32640419-32640727)
chr5 (1-381)||(8075519-8075894)
chr5 (1-381)||(2466457-2466835)
chr5 (74-381)||(544779-545086)
chr5 (74-381)||(14890846-14891139)
chr5 (74-381)||(4593792-4594093)
chr5 (1-309)||(2464731-2465037)
chr5 (19-309)||(40612414-40612702)
chr5 (1-309)||(8074513-8074818)
chr5 (1-309)||(4592923-4593222)
chr5 (1-309)||(28589761-28590070)
chr5 (74-316)||(14889900-14890144)
chr5 (1-307)||(545801-546097)
chr5 (99-285)||(18004814-18004997)
chr5 (1-309)||(32641498-32641787)
chr5 (100-316)||(9537199-9537410)
chr5 (173-275)||(9537845-9537948)
chr5 (94-264)||(32555323-32555498)
chr5 (107-260)||(34173444-34173611)
chr5 (198-275)||(21069540-21069618)
chr5 (198-308)||(27720714-27720827)
chr5 (70-166)||(37072705-37072801)
chr5 (1-44)||(13483174-13483217)
chr5 (196-260)||(30970296-30970361)
chr5 (133-193)||(2314387-2314447)
chr5 (2-49)||(14881010-14881057)
chr5 (1-49)||(544710-544758)
chr5 (204-244)||(578562-578602)
[»] chr7 (52 HSPs)
chr7 (1-381)||(35727761-35728137)
chr7 (1-381)||(7258337-7258713)
chr7 (1-381)||(42477443-42477819)
chr7 (1-381)||(44333201-44333576)
chr7 (1-381)||(48788359-48788733)
chr7 (1-381)||(48646111-48646488)
chr7 (1-312)||(10898826-10899134)
chr7 (1-305)||(45584256-45584557)
chr7 (189-378)||(45583832-45584023)
chr7 (1-318)||(30924763-30925069)
chr7 (1-309)||(48647198-48647504)
chr7 (5-260)||(35728900-35729143)
chr7 (1-309)||(7259448-7259745)
chr7 (100-306)||(7509210-7509419)
chr7 (70-309)||(10894470-10894711)
chr7 (74-309)||(44334214-44334442)
chr7 (128-251)||(12221486-12221609)
chr7 (118-309)||(39708304-39708489)
chr7 (72-225)||(42478111-42478263)
chr7 (313-381)||(10895344-10895412)
chr7 (100-274)||(6680311-6680479)
chr7 (198-309)||(33607272-33607385)
chr7 (92-296)||(12223456-12223653)
chr7 (91-262)||(43457616-43457788)
chr7 (204-296)||(32794564-32794657)
chr7 (196-296)||(34710160-34710261)
chr7 (107-235)||(46287219-46287343)
chr7 (74-222)||(48777388-48777536)
chr7 (121-316)||(19433666-19433860)
chr7 (91-262)||(43461526-43461692)
chr7 (196-296)||(5929886-5929987)
chr7 (196-296)||(44529541-44529642)
chr7 (198-316)||(32793423-32793543)
chr7 (189-310)||(34707858-34707982)
chr7 (114-270)||(33060992-33061157)
chr7 (110-192)||(46286690-46286772)
chr7 (188-261)||(8047072-8047145)
chr7 (109-244)||(24935511-24935649)
chr7 (1-48)||(13578334-13578381)
chr7 (1-48)||(44530625-44530672)
chr7 (100-262)||(39824306-39824471)
chr7 (118-191)||(24934972-24935045)
chr7 (1-46)||(46286565-46286610)
chr7 (1-49)||(43457519-43457567)
chr7 (179-239)||(48249823-48249883)
chr7 (1-48)||(8374976-8375023)
chr7 (1-48)||(48777318-48777365)
chr7 (1-46)||(8048800-8048845)
chr7 (91-192)||(33607368-33607469)
chr7 (118-194)||(385014-385089)
chr7 (100-164)||(8375505-8375569)
chr7 (4-48)||(39708168-39708212)
[»] chr3 (29 HSPs)
chr3 (1-381)||(36280001-36280378)
chr3 (74-381)||(55389154-55389461)
chr3 (1-381)||(53958786-53959161)
chr3 (1-381)||(17700580-17700958)
chr3 (74-381)||(48809340-48809647)
chr3 (1-381)||(48573047-48573427)
chr3 (175-381)||(52317146-52317352)
chr3 (1-316)||(48574207-48574520)
chr3 (1-309)||(36279014-36279312)
chr3 (1-258)||(2591689-2591941)
chr3 (1-309)||(52318080-52318378)
chr3 (100-309)||(55388216-55388429)
chr3 (1-309)||(17701683-17701980)
chr3 (79-309)||(48808508-48808730)
chr3 (74-200)||(53957804-53957930)
chr3 (196-296)||(36827231-36827333)
chr3 (189-262)||(40206163-40206237)
chr3 (114-184)||(33837334-33837404)
chr3 (100-213)||(19115020-19115133)
chr3 (1-48)||(11773065-11773112)
chr3 (120-192)||(47075245-47075317)
chr3 (1-48)||(2592021-2592068)
chr3 (1-48)||(19114595-19114642)
chr3 (114-193)||(20464260-20464339)
chr3 (114-184)||(40317941-40318011)
chr3 (1-46)||(3671100-3671145)
chr3 (195-244)||(33837485-33837534)
chr3 (1-46)||(34263867-34263912)
chr3 (109-165)||(45599050-45599106)
[»] chr8 (28 HSPs)
chr8 (1-381)||(35178489-35178865)
chr8 (74-381)||(10406337-10406630)
chr8 (1-309)||(32898200-32898506)
chr8 (5-261)||(1952783-1953027)
chr8 (1-305)||(10407343-10407645)
chr8 (1-309)||(35177457-35177761)
chr8 (119-318)||(28619279-28619479)
chr8 (118-309)||(5965177-5965370)
chr8 (92-287)||(5737011-5737207)
chr8 (198-296)||(32563828-32563927)
chr8 (92-270)||(5737808-5737977)
chr8 (100-318)||(32564227-32564455)
chr8 (100-200)||(30134743-30134843)
chr8 (202-264)||(41121361-41121423)
chr8 (118-192)||(41122616-41122690)
chr8 (99-165)||(45476338-45476404)
chr8 (100-194)||(45476415-45476509)
chr8 (118-177)||(13144535-13144594)
chr8 (118-184)||(41121300-41121366)
chr8 (198-296)||(41122534-41122633)
chr8 (1-48)||(45476224-45476271)
chr8 (109-165)||(2552199-2552255)
chr8 (262-309)||(30134855-30134903)
chr8 (1-48)||(5965456-5965503)
chr8 (94-144)||(33315029-33315079)
chr8 (204-262)||(33315112-33315170)
chr8 (221-262)||(39138453-39138495)
chr8 (100-144)||(41754145-41754189)
[»] chr1 (34 HSPs)
chr1 (74-381)||(32664634-32664941)
chr1 (1-381)||(9340724-9341086)
chr1 (1-381)||(52440244-52440620)
chr1 (1-381)||(7945258-7945615)
chr1 (93-309)||(6612580-6612798)
chr1 (100-296)||(52439618-52439815)
chr1 (1-309)||(32665532-32665831)
chr1 (1-245)||(9339708-9339943)
chr1 (100-309)||(34088214-34088415)
chr1 (92-309)||(51450169-51450388)
chr1 (74-262)||(7944286-7944470)
chr1 (118-244)||(26518284-26518407)
chr1 (92-252)||(22857372-22857533)
chr1 (94-309)||(6613737-6613939)
chr1 (198-304)||(25038133-25038240)
chr1 (198-304)||(25043345-25043452)
chr1 (204-262)||(23703948-23704006)
chr1 (91-307)||(34085690-34085893)
chr1 (205-261)||(22856945-22857001)
chr1 (1-48)||(10333200-10333247)
chr1 (92-191)||(25038050-25038149)
chr1 (92-191)||(25043262-25043361)
chr1 (100-214)||(5782551-5782665)
chr1 (168-233)||(51453552-51453617)
chr1 (1-48)||(6613993-6614040)
chr1 (101-164)||(8975337-8975400)
chr1 (1-48)||(22856742-22856789)
chr1 (94-164)||(29766094-29766164)
chr1 (92-192)||(3117818-3117918)
chr1 (204-244)||(11830174-11830214)
chr1 (101-193)||(16249821-16249913)
chr1 (204-244)||(17588802-17588842)
chr1 (1-49)||(25037940-25037988)
chr1 (1-49)||(25043152-25043200)
[»] chr4 (24 HSPs)
chr4 (1-381)||(47878186-47878545)
chr4 (78-327)||(54574560-54574810)
chr4 (159-341)||(42278727-42278910)
chr4 (1-309)||(42278111-42278408)
chr4 (92-310)||(20599646-20599860)
chr4 (92-297)||(4702967-4703171)
chr4 (1-309)||(47874626-47874923)
chr4 (100-275)||(4701940-4702116)
chr4 (199-296)||(6039377-6039475)
chr4 (189-316)||(19051106-19051232)
chr4 (1-140)||(50694811-50694946)
chr4 (198-272)||(19050488-19050563)
chr4 (1-48)||(26172956-26173003)
chr4 (118-192)||(53770944-53771018)
chr4 (100-192)||(53770470-53770562)
chr4 (1-48)||(19050300-19050347)
chr4 (189-244)||(42391688-42391743)
chr4 (91-192)||(19050404-19050505)
chr4 (270-310)||(21622192-21622233)
chr4 (100-165)||(26685345-26685410)
chr4 (120-164)||(2786420-2786464)
chr4 (94-162)||(21623001-21623069)
chr4 (92-184)||(39870536-39870628)
chr4 (99-195)||(42391757-42391853)
[»] scaffold0767 (2 HSPs)
scaffold0767 (118-316)||(5985-6181)
scaffold0767 (211-296)||(5870-5956)
[»] chr6 (4 HSPs)
chr6 (120-296)||(31239736-31239913)
chr6 (189-262)||(29845764-29845838)
chr6 (189-262)||(29857029-29857103)
chr6 (99-193)||(12676344-12676438)
[»] scaffold0039 (1 HSPs)
scaffold0039 (92-218)||(79242-79368)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-48)||(116117-116164)
[»] scaffold0237 (2 HSPs)
scaffold0237 (189-262)||(1969-2043)
scaffold0237 (189-262)||(3231-3305)


Alignment Details
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 2911552 - 2911172
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||| ||    
T  2911552 ttaaatataaataagtctctgactttgcacttccgttatcactttagttagtccctgacgttaaaaaaatctgttaagtgatgatatggcgcatatgagg 2911453  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2911452 tgtcataggaaccaaagtgaaagtagaaaattgtcactttggtctcttaaccaaaaatcaatatttccaaattgaatatcaaattcctaaatccttaaat 2911353  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatacttatatc 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2911352 ctcaaattcctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttaggtctctgactgtgcatacttatatc 2911253  T
Q  301 agttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2911252 agttaggtctctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 2911172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 31091588 - 31091211
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    | ||||||||       | | |||||||||||| ||| ||||||| ||    
T  31091588 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ctctgacgttaaaaaaatatgttaagtgatgatgtggtgcatatgagg 31091493  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| || ||||||| |||||||||||||| ||||||||||||| | ||||||||| ||||||| | | ||||||||||||||||||||||||||||||    
T  31091492 tgtcacagagaccaaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaaatccttaaat 31091393  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| ||||||||| |||    
T  31091392 ctcaaatccgtaaatgtcatctaattctctcttttgttcaaaattaatcattcattaaacacaacttactgttagatctctgactgcgcatacttactat 31091293  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31091292 cagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 31091211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 91 - 381
Target Start/End: Complemental strand, 24459429 - 24459138
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||| || || ||||||||| ||||||| |||||||||||||||||||| |||    
T  24459429 gcatatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaattcgtaa 24459330  T
Q  191 atccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgca 290  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || || |||| |||    
T  24459329 atccttaaatctgaaatccctaaatgtcgtctaattatctcttttgttcaaaattaatctttcattaaacacaacttactgttaggtccctaactgcgca 24459230  T
Q  291 tactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||| |||||||||||||| |||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  24459229 tacttactatcagttaggtctctgacaatgaattagcatatccaccagcttctattactcttgattattgttatattcacatgataattcat 24459138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 40000395 - 40000019
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||| ||  || |||||||||||||||||| |    ||||||||||       ||| |||||||||||| ||| ||||||| ||    
T  40000395 ttaaatacaaataagtctctaaccctgcacttccgttatcactttatt----ccctgacgttaagaaaatctgttaagtgatgat-tggtgcatatgagg 40000301  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| ||||||||||||||  |||||||||||  | ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  40000300 tgtcagagggaccaaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaatttctaaatccttaaat 40000201  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | || |||||| || ||||||| |||    
T  40000200 ctcaaatccataagtgtcatctaattctctcttttgttcaaaattaatctttcattaaacacaacttactgatcggtccctgactatgtatacttactat 40000101  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
     |||||||||  |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40000100 gagttaggtccctgacaatgaattaaaaaatccattagtatctattactcttgattattgttatattcacatgataattcat 40000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 74 - 381
Target Start/End: Original strand, 39015136 - 39015444
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||| |||||||||||||| |||| |||||||  | ||||||||| ||||||| |||||||    
T  39015136 ttaagtgatgatgtggtgcatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatattcccaaatt 39015235  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  39015236 gaatatcaaattccaaaatccctaaatctcaaatccctaaatgtcatctaattctctcttttgtttaaaattaatcttccattaaacacaacttattgtt 39015335  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || ||  ||||||||||||| || |||  ||||||||  ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  39015336 aggtcagtgactgtgcatacctactattggttaggtccctgacaatgaattaacaaatccattatcatctattactcttgattgttgttatattcacatg 39015435  T
Q  373 ataattcat 381  Q
    |||||||||    
T  39015436 ataattcat 39015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 182 - 381
Target Start/End: Complemental strand, 32766164 - 32765964
Alignment:
Q  182 aattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctct 281  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  32766164 aattcctaaatccttaaatctcaaatccctaaatgtcatttaattttctcttttgttcaaaattaatcttccattaaacacaacttattgttaggtctct 32766065  T
Q  282 gactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattca 380  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32766064 gactgtgcatacttactatcagttaggtccctgacaatgaattagcaaatcgattagcatctattactcttgattattgttatattcacatgataattca 32765965  T
Q  381 t 381  Q
    |    
T  32765964 t 32765964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 32765000 - 32765305
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || |||||||||||||||||| |    ||||||||||       | | |||||||||||| ||||||||||| ||    
T  32765000 ttaaatacaaataagtccctgactctgcacttccgttatcactttaat----ccctgacgttaaaaaa-tatgttaagtgatgatgtggcgcatatgagg 32765094  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    |||||||||||| ||| |||||||||||||| ||| |||||||| || ||||||||| ||||||  |||||||||||||||||| ||||||||| |||||    
T  32765095 tgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatccctaaat 32765194  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
     | |||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||    
T  32765195 tttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacagcaacctactgttaggtccctgactgtgcatacttacta 32765294  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  32765295 tcagttaggtc 32765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 24458122 - 24458428
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||| ||||||| |  |||| |||||||||||||||    | || |||||       ||||||||||||| || ||||||||||| ||    
T  24458122 ttaaatacaaataagtttctgactctacactttcgttatcactttagt----ctctaacgttaaaaaaatctattaagtgataatgtggcgcatatgagg 24458217  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||||||| || || |||||| ||||||   |||||||||||||| || ||||||||| |||||    
T  24458218 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaaatccctaaat 24458317  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
     | |||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| ||||| |||||||||||||| ||    
T  24458318 tttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtctcttactgtgcatacttacta 24458417  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  24458418 tcagttaggtc 24458428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 2910162 - 2910468
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || |||||| || ||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  2910162 ttaaatacaaataagtctctgactctgcacttcctttgtcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 2910257  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    | ||| | |||||||||||||||| ||||||  |||||||||||  | ||||||||| ||||||  |||||||||||||| ||| ||||||||| |||||    
T  2910258 tatcacaaggaccaaaatgaaagtcgaaaatgatcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaaatccgtaaat 2910357  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactt-ata 298  Q
     |||||||| ||||||||||||| || |||  |||||||||||| |||||| ||||||||| |||| ||||||||| || |||||||||||||||| |||    
T  2910358 ttcaaatccttaaatgtcatctagttatcttgtttgttcaaaatcaatcttacattaaacaccaacctactgttaggtccctgactgtgcatacttaata 2910457  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  2910458 tcagttaggtc 2910468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 14704068 - 14704363
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| || ||| || ||||||||||||||||||||    ||||||||||       | | |||||||||||| ||||||||||| ||    
T  14704068 ttaaatacaaataagtccctcactctgcacttccgttatcactttagt----ccctgacgttaaaaaa-tatgttaagtgatgatgtggcgcatatgagg 14704162  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||  | ||||||||| ||||||  ||||||||||||||        |||||| |||||    
T  14704163 tgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatc--------aaatccctaaat 14704254  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||||||||||||||| | | ||||||||||||| |||||||||||||||| |||| || |||||| || || |||||||||||||| ||    
T  14704255 cttaaatccttaaatgtcatctaattatattttttgttcaaaatcaatcttccattaaacaccaacctattgttagttccct-actgtgcatacttacta 14704353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 309
Target Start/End: Original strand, 31090321 - 31090525
Alignment:
Q  107 agggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaa 206  Q
    |||||||||| |||||||||||||| | | |||||||| || |||||||||  |||||  |||||||||||||||||| | ||||||| ||||  | |||    
T  31090321 agggaccaaagtgaaagtagaaaatggccgctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccttaaatccctaaaatttaaa 31090420  T
Q  207 tccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagtt 304  Q
    ||| |||||||||||||||| || |||||||||||||| |||||||||||||||| |||| |||| |||| |  ||||||||||||||||| ||||| ||    
T  31090421 tccataaatgtcatctaattatcccttttgttcaaaatcaatcttccattaaacaccaacctactattaggttcctgactgtgcatacttactatcattt 31090520  T
Q  305 aggtc 309  Q
    |||||    
T  31090521 aggtc 31090525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 74 - 316
Target Start/End: Complemental strand, 39016375 - 39016142
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    ||||||||||||||  |||||||| ||||||| | |||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||  |||||||    
T  39016375 ttaagtgatgatattacgcatatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatgcccaaatt 39016276  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgt 272  Q
    ||||||         |||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||  |||||||||||||||| |||| ||  ||    
T  39016275 gaatat--------gaaatccctaaatcttaaatccttaaatgtcatctaattatctattttgttcaaaa-caatcttccattaaacaccaaccta--gt 39016187  T
Q  273 tagctctctgactgtgcatactta-tatcagttaggtctgtgaca 316  Q
    ||  || ||||||||||||| ||| |||||||||||||| |||||    
T  39016186 taagtccctgactgtgcatatttactatcagttaggtctctgaca 39016142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 7073701 - 7073969
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggc---------- 90  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| || |              
T  7073701 ttaaatacaaataagtctctgattctgcacttccgttatcactttagt----ccctgacgttaagttattctgttaagtgatgatgtgacacagttacat 7073796  T
Q  91 -gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaac-caatatttccaaattgaatatcaaattcct 188  Q
     ||||||  ||||||| |||||| |||  |||| || |||||  ||||||||||| || |||||||||  ||||||| | ||||||||| |||||| | |    
T  7073797 ggcatattaggtgtcacagggactaaagcgaaaataaaaaatgatcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaatcctt 7073896  T
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    |||||  || ||||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||    
T  7073897 aaatcactatatctcaaatccctaaatatcatctaattctctctttcgttcaaaatcaatcatccattaaaca 7073969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 92 - 262
Target Start/End: Complemental strand, 17330193 - 17330023
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| || ||| ||| |||||||| ||||| |||||||||||| || |||| |||| ||||||  | ||||||||| ||||||   ||||    
T  17330193 catatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatcattaaa 17330094  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 262  Q
    ||| ||||| ||||| |||| |||||||| ||||||||||||||||||||||  || | ||||||||||||    
T  17330093 tccctaaatttcaaacccctgaatgtcatataattctctcttttgttcaaaaccaagcatccattaaacac 17330023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 38984857 - 38984746
Alignment:
Q  202 tcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatc-ttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||| |||||| ||| ||| |||||||||||| ||    
T  38984857 tcaaatccgtaaatgtcatctaattctctcttttgttcaaaataaatcttttcattaaacaccaacttattgttagatctttgattgtgcatacttatta 38984758  T
Q  299 tcagttaggtct 310  Q
    ||||||||||||    
T  38984757 tcagttaggtct 38984746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 39256876 - 39256769
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatca 301  Q
    |||||| || ||| ||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||| || |||| |||||||||||| ||| |    
T  39256876 aaatccttatatgacatctaattctctcttttgttcaaagtcaatcttccattaaaaaccaacttactgttaggtcgctgattgtgcatacttactatta 39256777  T
Q  302 gttaggtc 309  Q
    ||||||||    
T  39256776 gttaggtc 39256769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 5914978 - 5914858
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| || ||| |||||||||||| |||||||||||||| ||| || ||||||||| ||||||  |||  |||||| | ||||  |||||||| ||||    
T  5914978 gtgtcacagagactaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaaatccctaaa 5914879  T
Q  200 tctcaaatccctaaatgtcat 220  Q
    |||||||| ||||||||||||    
T  5914878 tctcaaattcctaaatgtcat 5914858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 43380736 - 43380836
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| | | || ||| |||||||||||||| |||||||||||| || ||||||||| ||||||  ||||||||||| |||||||||||||    
T  43380736 catatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaattcctaaa 43380835  T
Q  192 t 192  Q
    |    
T  43380836 t 43380836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32766300 - 32766168
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnn-tctattaagtgatgatatggcgcatatggg 99  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    || |||||||        ||| |||||||||||| ||||||||||| |    
T  32766300 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccttgacgttaaaaaaaatctgttaagtgatgatgtggcgcatatgag 32766205  T
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtca 136  Q
    |||||| || ||||||| |||||||||||||| ||||    
T  32766204 gtgtcacagagaccaaagtgaaagtagaaaatggtca 32766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 31443192 - 31443084
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaa 198  Q
    ||||||| || ||| ||| ||||||||||||||||||| ||||||  || |||| |||| |||||| |||||||| ||| |||||||||||||||| ||     
T  31443192 ggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaattaaatctcaaattcctaaatccctat 31443093  T
Q  199 atctcaaat 207  Q
    ||| |||||    
T  31443092 atcccaaat 31443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 33162020 - 33162073
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatctt 251  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  33162020 aatctcaaatccttaaatgtcatctaattatctcttttgttcaaaatcaatctt 33162073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 12003745 - 12003845
Alignment:
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||| ||| ||||| |||||||| || | |||||||||| |||| |||||||||||  ||||||||||||||||||  |||||| | |||||    
T  12003745 tgtcacagggactaaagtgaaaatagaaaatagtaattttggtctctcaaccgaaaaccaatatccccaaattgaatatcaaatctctaaattcctaaat 12003844  T
Q  201 c 201  Q
    |    
T  12003845 c 12003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 21733699 - 21733627
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    |||||||| ||||| ||||||||||||||| |||| |||| ||||||| ||||||||||| |||||| |||||    
T  21733699 tgaaagtaaaaaatggtcactttggtctctgaaccgaaaatcaatattcccaaattgaatctcaaatccctaa 21733627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 8420842 - 8420747
Alignment:
Q  154 aaaaccaatatttccaaattgaatatcaaattcctaaatcc----ttaaatc-tcaaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||| ||||||| | ||||||||| ||||||||||||||||    || |||| | |||||||||||| ||||||||||| ||||||||||||||||    
T  8420842 aaaatcaatattccgaaattgaatctcaaattcctaaatcccgaatttaatcataaaatccctaaatttcatctaattccctcttttgttcaaaat 8420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 14705097 - 14705059
Alignment:
Q  343 attactcttgattattgttatattcacatgataattcat 381  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14705097 attactcttgattattgttatattcacatgataattcat 14705059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 21732280 - 21732362
Alignment:
Q  108 gggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||| ||| |||||||||||||| |||||||||||| || |||||||||  |||||  ||||||||||| |||||| |||||    
T  21732280 gggactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatctcaaatccctaa 21732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 264
Target Start/End: Original strand, 39999110 - 39999259
Alignment:
Q  103 tcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatct 202  Q
    ||||||||| || | |||||||||||||||||||||||| || || ||| ||||| ||||||   | |||||||||||        |||||| |||||||    
T  39999110 tcatagggatcagagtgaaagtagaaaattgtcactttgatccctgaacaaaaaatcaatat---ccaattgaatatc--------aaatccctaaatct 39999198  T
Q  203 caaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaa 264  Q
     |||||| ||||||| |||||||| | | ||||||||||||| ||||| | |||||||||||    
T  39999199 taaatccttaaatgttatctaatt-ttttttttgttcaaaataaatctcctattaaacacaa 39999259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 43380823 - 43380897
Alignment:
Q  202 tcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttag 275  Q
    |||||| |||||||||| |  |||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  43380823 tcaaattcctaaatgtcgtacaattctctattttgttcaaaatcaatattccattaaacaccaacttactgttag 43380897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 31442614 - 31442691
Alignment:
Q  186 cctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    ||||||| | |||||||||||||||||||| ||||||||||  |||||||||| |||||  ||| |||||||||||||    
T  31442614 cctaaattcctaaatctcaaatccctaaatctcatctaatttcctcttttgtttaaaatcaaattttccattaaacac 31442691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 33163315 - 33163258
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    |||| |||||||||||| ||||| |||||| |||||||||| ||||||||||||||||    
T  33163315 aaattcctaaatgtcatataattatctcttgtgttcaaaatcaatcttccattaaaca 33163258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 12010224 - 12010300
Alignment:
Q  108 gggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    ||||| ||| |||||||||||||| |||| |||||| | | ||||||||| ||||||  ||||||||||||||||||    
T  12010224 gggactaaagtgaaagtagaaaatggtcattttggtatatgaaccaaaaatcaatatccccaaattgaatatcaaat 12010300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21733832 - 21733784
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||    
T  21733832 ttaaatacaaataagtctctgactctgcacttccgtcatcactttagtt 21733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 12004841 - 12004762
Alignment:
Q  182 aattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    ||||||| ||||| ||||| |||||| | ||||| |||||||||| ||||||||||||||||| ||  || |||||||||    
T  12004841 aattccttaatccctaaatatcaaattcataaatctcatctaattatctcttttgttcaaaatcaaatttacattaaaca 12004762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17330291 - 17330244
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||    
T  17330291 ttaaatacaaataagtctctgactctgcatttccgttatcactttagt 17330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17466889 - 17466842
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  17466889 ttaaatacaaagaagtctctgactctgcacttccgttatcactttagt 17466842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 7412617 - 7412536
Alignment:
Q  195 ttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttag 275  Q
    |||||||||||||   |||||||||| ||||| ||||||||||||||||| ||| ||| ||||| || ||||||| ||||||    
T  7412617 ttaaatctcaaatttataaatgtcatataattatctcttttgttcaaaatcaattttctattaaccaccaacttaatgttag 7412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 36012769 - 36012724
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtct 145  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||    
T  36012769 gtgtcagagggactaaaatgaaagtagaaaatggtcactttggtct 36012724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 12396162 - 12396226
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    |||||| | |||| |||||||||||||||||| |||||||| ||| || ||||||||| ||||||    
T  12396162 gtgtcacatggactaaaatgaaagtagaaaatagtcactttagtcactaaaccaaaaatcaatat 12396226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34037734 - 34037686
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    |||||||||||||||||| ||||| || ||||| |||||||||||||||    
T  34037734 ttaaatacaaataagtctatgactctgcacttctgttatcactttagtt 34037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 12003869 - 12003928
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaatt-aatcttccattaaacac 262  Q
    |||||||||||| ||||||||||  || |||||||||||||| ||| |||||||||||||    
T  12003869 aaatccctaaatctcatctaatttcctattttgttcaaaattaaatattccattaaacac 12003928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33161829 - 33161876
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||| |||| ||||||| |||| |||||||||||||||||||||||    
T  33161829 ttaaatgcaaagaagtctcagactatgtacttccgttatcactttagt 33161876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 37607288 - 37607343
Alignment:
Q  109 ggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    |||| ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||    
T  37607288 ggactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatat 37607343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 43381062 - 43381020
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaa 241  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  43381062 aatctcaaatccctaaatgacatctaa-tctctcttttgttcaa 43381020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 12004923 - 12004849
Alignment:
Q  120 aaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcc 194  Q
    |||| |||||||||||  ||||||| ||||||| |||||||||||  ||||||||||| |  ||| |||||||||    
T  12004923 aaagaagaaaattgtcgttttggtcccttaaccgaaaaccaatatccccaaattgaatcttcaatccctaaatcc 12004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 14886636 - 14886678
Alignment:
Q  102 gtcatagggaccaaaatgaaagtagaaaattgtcactttggtc 144  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||    
T  14886636 gtcatagggactaaaatgaaagtacaaaattgtcgctttggtc 14886678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 11985865 - 11985930
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaa 183  Q
    |||||||||||||  ||||||||| || || |||| ||||  |||||||||||||||||| |||||    
T  11985865 tgaaagtagaaaaaagtcactttgatccctgaaccgaaaattaatatttccaaattgaatctcaaa 11985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 33161936 - 33162029
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    ||||||| ||||||| |  ||| ||||||||||||||||||  ||||||| ||| || ||||||||| | ||||  |||||| |||| ||||||    
T  33161936 gcatatgaggtgtcacaaagactaaaatgaaagtagaaaatcatcactttagtccctgaaccaaaaatcgatatccccaaatcgaatctcaaat 33162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 33163405 - 33163320
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    ||||||| ||| |||||| | ||||||||||| |||   ||||||| || ||||||||| ||||||  ||||||||||| ||||||    
T  33163405 ggtgtcacaggcaccaaagtcaaagtagaaaaatgttgttttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaat 33163320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 39256949 - 39256868
Alignment:
Q  118 tgaaagtagaaaattgtcactttggt-ctctt-aaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcctta 197  Q
    ||||| |||||||| ||||||||||| ||| | |||||||||  |||||| || |||||||| |||||| ||||||||||||    
T  39256949 tgaaattagaaaatggtcactttggttctcctgaaccaaaaattaatattccccaattgaatctcaaatccctaaatcctta 39256868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 18676750 - 18676698
Alignment:
Q  119 gaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaa 171  Q
    ||||||||||||| |||||||||||| || ||| ||||| |||||| ||||||    
T  18676750 gaaagtagaaaatggtcactttggtccctgaacaaaaaatcaatatctccaaa 18676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 31814256 - 31814196
Alignment:
Q  166 tccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaatt 226  Q
    |||||||||||| ||||||   ||||||| ||||||| ||||| |||||| ||||||||||    
T  31814256 tccaaattgaatttcaaatctttaaatccctaaatcttaaatctctaaatatcatctaatt 31814196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 25590492 - 25590875
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||| | || ||||| |||||||||||| |    | ||||||||       | | |||||||||||| ||||||||||| ||    
T  25590492 ttaaatacaaataagtctctgattctgcacttctgttatcactttaat----ctctgacgttaaaaaattttgttaagtgatgatgtggcgcatatgagg 25590587  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  25590588 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 25590687  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| || || |||||||||||||| |||    
T  25590688 ctcaaatccataaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaaatcttattgttaggtccctaactgtgcatacttactat 25590787  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcatctcatt 387  Q
    ||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25590788 cagttagatccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcatatcatt 25590875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 28591105 - 28590797
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaac-caatatttccaaat 172  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||| || |||||||||  ||||||| ||||||    
T  28591105 ttaagtgatgatgtggcgcatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaatcaatattcccaaat 28591006  T
Q  173 tgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgt 272  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28591005 tgaatatcaaattcttaaatccttaaatctcaaatccctaaatgtcatataattctcttttttgttcaaaattaatcttccattaaacacaacttactgt 28590906  T
Q  273 tagctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacat 371  Q
    ||| || ||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28590905 tag-tccctgactgtgcatacttactatcagttagctcactgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacat 28590807  T
Q  372 gataattcat 381  Q
    ||||||||||    
T  28590806 gataattcat 28590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 78 - 381
Target Start/End: Original strand, 40611395 - 40611699
Alignment:
Q  78 gtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaat 177  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  40611395 gtgatgatgtggcgcatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaat 40611494  T
Q  178 atcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagct 277  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| |    
T  40611495 atcaaattcctaaatccttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatctttcattaaacacaacttagtgttaggt 40611594  T
Q  278 ctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataa 376  Q
    | |||||||| |||||||| |||||||||||||   ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40611595 ccctgactgtacatacttactatcagttaggtcccagacaatgaattggcaaatccattaacatctattactcttgattattgttatattcacatgataa 40611694  T
Q  377 ttcat 381  Q
    |||||    
T  40611695 ttcat 40611699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 74 - 381
Target Start/End: Original strand, 32640419 - 32640727
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| || | |||||  ||||||| |||||||||| |||||||||||||| ||||||||||||  | ||||||||| ||||||| | |||||    
T  32640419 ttaagtgatgatgtgacacatataaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattccaaaatt 32640518  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32640519 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttattcaaaattaatcttccattaaacacaacttactgtt 32640618  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || ||  ||| |||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  32640619 aggtccttgattgtgcatacttactatcagttatgtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacata 32640718  T
Q  373 ataattcat 381  Q
    |||||||||    
T  32640719 ataattcat 32640727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 8075894 - 8075519
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||| |||| ||||| | || |||| |||||||||||||||    ||||||||||       ||| |||||||||||| || |||||||| ||    
T  8075894 ttaaatacaaaaaagtatctgattctgcactttcgttatcactttagt----ccctgacgtttaaaaaatctgttaagtgatgatgtgacgcatatgagg 8075799  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| ||||||| ||||||  ||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  8075798 tgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctatatccctaaat 8075699  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |  ||    
T  8075698 ctcaaat-cctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttaggtc-ctgactgtgcatactaaccat 8075601  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8075600 cagttaagtcactgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacataataattcat 8075519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 2466835 - 2466457
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnn-tctattaagtgatgatatggcgcatatggg 99  Q
    ||||||| ||||||||| || ||| || ||||||||||||||||||||    ||||||||||        ||| ||||||||||||  || ||||||| |    
T  2466835 ttaaataaaaataagtccctaactctgcacttccgttatcactttagt----ccctgacgttaaaaaaaatctgttaagtgatgatgcggtgcatatgag 2466740  T
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||  | |||||||| |||||||||||||| |||| ||||||| || ||||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  2466739 gtgtcccatggaccaaagtgaaagtagaaaatagtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaattcttaaatccttaaa 2466640  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-ta 298  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  2466639 tctcaaatccctaaatgtcatctaattctcttttttgttcaaaattaaatctccattaaacacaacttattgttaggtctctgactgtgcatacttacta 2466540  T
Q  299 tcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||| |||  |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2466539 tcagttatgtccttgacaatgaattagaaaatccattagcatctattactgttgattattgttatattcatatgataattcat 2466457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 74 - 381
Target Start/End: Original strand, 544779 - 545086
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    ||||||||| || ||||||||||| ||||||| ||||| |||| |||||||||||||| |||| || |||  || ||||||||| ||||||| |||||||    
T  544779 ttaagtgattatgtggcgcatatgaggtgtcacagggatcaaagtgaaagtagaaaatagtcatttgggttcctgaaccaaaaatcaatattcccaaatt 544878  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    ||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  544879 gaatatcaaattcctaaatccctaaatctcaaat-cctaaaaatcatataattatctcttttgttcaaaattaatctttcattaaacacaacttattgtt 544977  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || ||||||||||||||||| |||||||||||||  | ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  544978 aggtccctgactgtgcatacttactatcagttaggtccctaacaatgaattaacaaatctattaacatctattactcttgattattgttatattcacatg 545077  T
Q  373 ataattcat 381  Q
    |||||||||    
T  545078 ataattcat 545086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 14891139 - 14890846
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||||||||||| ||||||| | |||||||| ||| |||||||||| |||||||| ||| || || |||||| ||||||| |||||||    
T  14891139 ttaagtgatgatgtggcgcatatgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatattcccaaatt 14891040  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    |||| ||||||||||||||||               |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14891039 gaatttcaaattcctaaatcc---------------ctaaatgtcatctaatcctctcttttgttcaaaattaatcttccattaaacacaacttattgtt 14890955  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || ||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14890954 aggtccctgactgtgcatatttactatcagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 14890855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 4594093 - 4593792
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||| ||||   | |||  | ||||||||| ||||||| |||||||    
T  4594093 ttaagtgatgatgtggcgcatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcatcgtagtccatgaaccaaaaatcaatattcccaaatt 4593994  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  4593993 gaatatcaaattcctaaatc--------tcaaatccctaaatgtcatctaattatctcttttgttcaaaattaatcttccattaaacataacttaatgtt 4593902  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgac-aatgaattagcaaatccattagcatctattactcttgattattgttatattcacat 371  Q
    || || ||||||||||||||||| |||||||||| ||  |||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |    
T  4593901 aggtccctgactgtgcatacttactatcagttagatccctgacaaatgaattaacaaatccaatagcatctactactcttgattattgttatattcacgt 4593802  T
Q  372 gataattcat 381  Q
    ||||||||||    
T  4593801 gataattcat 4593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 2464731 - 2465037
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| || ||| || |||| |||||||||||||||    | ||||||||       | | |||||||||||| ||||||||||| ||    
T  2464731 ttaaatacaaataagtccctaactctgcacttacgttatcactttagt----ctctgacgttaaaaaaatttgttaagtgatgatgtggcgcatatgagg 2464826  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||  |||||||||||||||||| |||||||||||||||    
T  2464827 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatccttaaat 2464926  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||||||||||||||| ||| ||||||||||| | |||||||||||||||| |||| ||||||||| || ||||||||||||| ||| ||    
T  2464927 cttaaatccttaaatgtcatctaattatcttttttgttcaaagtcaatcttccattaaacaccaacctactgttaggtccctgactgtgcatatttacta 2465026  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  2465027 tcagttaggtc 2465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 19 - 309
Target Start/End: Complemental strand, 40612702 - 40612414
Alignment:
Q  19 ctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatggggtgtcatagggaccaaaat 118  Q
    |||||| || |||||||||||||||||| ||    |||||||||       ||| |||||||||||||||||||||||| ||||||| | |||||||| |    
T  40612702 ctgactctgcacttccgttatcactttaatt----cctgacgttaaaaaaatctgttaagtgatgatatggcgcatatgaggtgtcacaaggaccaaagt 40612607  T
Q  119 gaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtc 218  Q
    ||||||||||||| || ||||||||| || ||||||||| ||||||  |||||||||||| ||||| ||||||||| ||||||| |||||||||||| ||    
T  40612606 gaaagtagaaaatggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaatccctaaatcttaaatccctaaatatc 40612507  T
Q  219 atctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||| || ||||||||||||||||| |||||||||||||    
T  40612506 atctaattatctcttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgactgtgcatacttactatcagttaggtc 40612414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 8074513 - 8074818
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||    |||||||||       ||  |||||||||||| ||||||||||| ||    
T  8074513 ttaaatacaaataagtccctgactctgcacttccgttatcactttagtt----cctgacgttaaaaaa-tcggttaagtgatgatgtggcgcatatgagg 8074607  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||| || ||||||||| ||||||  |||||||||||||||||| || |||||| |||||    
T  8074608 tgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccccaaatccctaaat 8074707  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||  |||||||||||||||| |||||| |||||||||| |||||| ||||||||| |||| |||||||||||| ||||||||||||||||| ||    
T  8074708 cttaaatctttaaatgtcatctaattatctcttctgttcaaaatcaatcttacattaaacaccaacctactgttagctccctgactgtgcatacttacta 8074807  T
Q  299 tcagttaggtc 309  Q
    | |||||||||    
T  8074808 taagttaggtc 8074818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 4592923 - 4593222
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  4592923 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 4593018  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    || || |||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||  |||||||||| || ||      |||||| |||||    
T  4593019 tg-cacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaaaataaa------aaatccctaaat 4593111  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||| | |||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||| ||||||||| || ||||||||||||||||| ||    
T  4593112 cttaaattcttaaatgtcatctaattatctcttttgttcaaaatcaatctttcattaaacaccaacatactgttaggtccctgactgtgcatacttacta 4593211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 28589761 - 28590070
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||  | | ||||||||||||||||||| || ||||||    | ||||||||       ||| |||||||||||| ||||||||||| ||    
T  28589761 ttaaatacaaatacatttttgactttgtacttccgttaccattttagt----ctctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 28589856  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
     ||||||||||||||| | |||||||||||| |||||||||||| || ||||||||| ||||||  | ||||||||||||||||  |||||||  ||||     
T  28589857 ggtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaaatctctaaac 28589956  T
Q  201 ctcaaatccctaaatgtcatcta---attctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    || |||||| |||||||||| ||   ||| | | ||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  28589957 cttaaatccttaaatgtcatgtaattatttttttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtctctgactgtgcatactta 28590056  T
Q  297 -tatcagttaggtc 309  Q
     |||||||||||||    
T  28590057 ctatcagttaggtc 28590070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 74 - 316
Target Start/End: Original strand, 14889900 - 14890144
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| || |||||||| |||||||||||||||||| | |||||||||||| |||||||||||| || ||||||||| ||||||  |||||||    
T  14889900 ttaagtgatgatgtgacgcatatgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaatt 14889999  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgt 272  Q
    ||||||||| |  |||||||| ||||||| |||||| ||||||||||||| || | ||||||||||||||| |||||||||||||||| |||  | ||||    
T  14890000 gaatatcaattcgctaaatccctaaatcttaaatccttaaatgtcatctagttatttcttttgttcaaaatcaatcttccattaaacaccaatctgctgt 14890099  T
Q  273 tagctctctgactgtgcatactta-tatcagttaggtctgtgaca 316  Q
    ||| || |||| |||||||||||| ||| |||| ||||| |||||    
T  14890100 taggtccctgattgtgcatacttactattagtttggtctctgaca 14890144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 546097 - 545801
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||| |||||||  ||||| || ||||||||||||||||||||    ||||||||||       | | ||||||||||||||| |||||||| ||    
T  546097 ttaaatacagataagtccttgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatttgttaagtgatgatatgacgcatatgagg 546002  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| |||||||||||||| ||||||||||||  | ||||||||| ||||||  |||||||||||| |        |||||| |||||    
T  546001 tgtcacaaggaccaaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatatgcccaaattgaataac--------aaatccctaaat 545910  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||  |||||||||||||||| ||||||||||||  ||| ||||||||||||||||| ||| ||||||||| || ||||||||||||||||| ||    
T  545909 cttaaatcgttaaatgtcatctaattatctcttttgttctgaatcaatcttccattaaacactaacctactgttaggtccctgactgtgcatacttacta 545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 99 - 285
Target Start/End: Original strand, 18004814 - 18004997
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaa 198  Q
    ||||||| || ||| |||||||||||||||||| |||||||||||| || || |||||  ||||||  |||||||||||||||||| |||||||||        
T  18004814 ggtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaaatcc---- 18004909  T
Q  199 atctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgact 285  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||| | ||| |||||||||  |||||||||    
T  18004910 atctcaaatccttaaatgttatctaattctctctcttgttcaatattaatcttccattaaataccaatttactgttaagtctctgact 18004997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 32641787 - 32641498
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||  |||||| || |||||||||||||||||| |    ||||||||||       | | |||||||||||| ||||||||||| ||    
T  32641787 ttaaatacaaataagttgctgactctgcacttccgttatcactttaat----ccctgacgttaaaaaaatatgttaagtgatgatgtggcgcatatgagg 32641692  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    | ||| |||||||||| |||||||| ||||| || |||||| || || ||||||||| ||||||  ||||||||||||| |||| |||||||||||        
T  32641691 tatcacagggaccaaa-tgaaagtaaaaaatggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaaatcctt---- 32641597  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
                |||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| || || |||||||||||||| ||    
T  32641596 ------------aatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctaactgtgcatacttatta 32641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 316
Target Start/End: Original strand, 9537199 - 9537410
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| || ||| ||| |||||||||||||| ||||||||| || || || |||||| ||||||  ||||||||||| |||||| ||||||||          
T  9537199 gtgtcacagtgactaaagtgaaagtagaaaatagtcactttgatccctgaatcaaaaatcaatatccccaaattgaatctcaaatccctaaatc------ 9537292  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatctt-ccattaaaca-caacttactgttagctctctgactgtgcatactta- 296  Q
      | |||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||| |||| ||  ||||||||||||||||     
T  9537293 --taaaatccataaatgtcatctaattctctcttttgttcaaagtcaatcttcccattaaacaccaacttactattaggtccttgactgtgcatacttac 9537390  T
Q  297 tatcagttaggtctgtgaca 316  Q
    ||||| |||||||| |||||    
T  9537391 tatcatttaggtctctgaca 9537410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 9537948 - 9537845
Alignment:
Q  173 tgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactg 271  Q
    ||||| |||| | ||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||    
T  9537948 tgaatctcaattccctaaatccctaaatctcaaattcctaaatgttatctaattctctcctttgttcaaaatcaatcttccattaaacatcaacttaatg 9537849  T
Q  272 ttag 275  Q
    ||||    
T  9537848 ttag 9537845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 264
Target Start/End: Complemental strand, 32555498 - 32555323
Alignment:
Q  94 tatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||| ||||||| | |||| ||| |||||||||||||||||||||| | || || |||| |||| ||||| |  || | | ||| |||||||||||||||    
T  32555498 tatgaggtgtcacatggactaaagtgaaagtagaaaattgtcacttggttc-ctgaaccgaaaatcaataatctcatactaaatctcaaattcctaaatc 32555400  T
Q  194 c----ttaaatc-tcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacacaa 264  Q
    |    || |||| |||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||    
T  32555399 ccgaattcaatcctcaaatccctaaatctcatctaattctctcttttgatcaaaatcaaatcttccattaaacacaa 32555323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 34173444 - 34173611
Alignment:
Q  107 agggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatc----- 201  Q
    |||||| ||| ||||||||||||||  |||||||||||||| ||||||||| ||||||  ||||||||||| ||||||  |||||||| ||||||         
T  34173444 agggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaaatccctaaatcctgaa 34173543  T
Q  202 --------tcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaac 260  Q
            |||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||||||    
T  34173544 tttaatcttcaaatccctgaatctcatctaattctctcttttgtacaaaatcaaatcttccattaaac 34173611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 21069540 - 21069618
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttag 275  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| ||| || ||||||||| ||||||||||||||    
T  21069540 aatctcaaatccctaaatgtcatctaattctctattttcttcaaaatcaatatttcattaaacaccaacttactgttag 21069618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 27720714 - 27720827
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caac-ttactgttagctctctgactgtgcatactt 295  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||| ||||| |||| || || | |||||||||||    
T  27720714 aatcttaaatccctaaatatcatataattctctcttttgttcaaaatcaatctttcattaaacatcaactttactattaggtccctaattgtgcatactt 27720813  T
Q  296 a-tatcagttaggt 308  Q
    | ||||||||||||    
T  27720814 attatcagttaggt 27720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 37072705 - 37072801
Alignment:
Q  70 tctattaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatattt 166  Q
    |||||||| |||||| || ||  | ||| ||||||| | ||||||||||||||||||||||| |||||||| ||| || |||| |||| ||||||||    
T  37072705 tctattaactgatgagatagcctacatgaggtgtcacatggaccaaaatgaaagtagaaaatagtcactttagtccctgaaccgaaaatcaatattt 37072801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13483217 - 13483174
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactt 44  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  13483217 ttaaatacaaacaagtctctgactttgcacttccgttatcactt 13483174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 30970296 - 30970361
Alignment:
Q  196 taaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaac 260  Q
    |||||||||||| ||||||||||||  |||||||| |||||||||||||  |||||| ||||||||    
T  30970296 taaatctcaaattcctaaatgtcatacaattctctattttgttcaaaatcaaatcttgcattaaac 30970361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 2314447 - 2314387
Alignment:
Q  133 gtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||||||||||| || ||||||||   |||||  |||||||||||||||||||||||||||    
T  2314447 gtcactttggtccctgaaccaaaatttaatatccccaaattgaatatcaaattcctaaatc 2314387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 14881010 - 14881057
Alignment:
Q  2 taaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||||    
T  14881010 taaacacaaataagtccctgactctgcacttccgttatcactttagtt 14881057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 544710 - 544758
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    ||||||||||||||||| |||||| || ||||||||||| | |||||||    
T  544710 ttaaatacaaataagtcactgactctgcacttccgttataaatttagtt 544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 578602 - 578562
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||||||||||| ||||||||||| ||||||||||| ||||    
T  578602 aaatccctaaatctcatctaattccctcttttgttctaaat 578562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 233; Significance: 1e-128; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 35727761 - 35728137
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| |||||||||||||||| || || |||||||||||||||||     |||||||||       ||| |||||||||||| ||||||||||| ||    
T  35727761 ttaaatataaataagtctctgactctgcacatccgttatcactttagt-----cctgacgttaaaaatctctgttaagtgatgatgtggcgcatatgagg 35727855  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| ||| |||||||||| ||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||| |||||| | |||||    
T  35727856 tgtcacagggaccaaagtgatagtagaaaatggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaatttctaaattcctaaat 35727955  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||| |||    
T  35727956 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaatttattgttagatcactgactgtgcatacttactat 35728055  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35728056 cagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 35728137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 7258337 - 7258713
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||    ||||||||||       ||| |||||||||||| | ||||||||| ||    
T  7258337 ttaaatacaaataagtctctgactctgcacttctgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtagcgcatatgagg 7258432  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  7258433 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 7258532  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| || || |||||||||||||| |||    
T  7258533 ctcaaatccctaaatgtcatctaattctctcttttgttc-aaattaatcttccattaaacacaatttattgttagatccctaactgtgcatacttactat 7258631  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    | ||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7258632 ctgttaggtccatgacaattaattagcaaatccattaacatctattactcttgattattgttatattcacatgataattcat 7258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 42477443 - 42477819
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||| |||| |    ||||||||||       | | |||||||||||| ||||||||||| ||    
T  42477443 ttaaatacaaataagtc-ctgactctgcacttccgttatcattttaat----ccctgacgttaaaaaaatatgttaagtgatgatgtggcgcatatgagg 42477537  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| ||||||||||||||  ||||||||||| || |||||||||| |||||| ||| |||||||||||||||||||||| |||||||    
T  42477538 tgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaaatacttaaat 42477637  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||||||||||||| |||    
T  42477638 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaagcacaacttaatgttaggtccctgactgtgcatacttactat 42477737  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42477738 cagttaggtccctgacaatgaattagcaaatctattagcatctattactcttgattattgttatattcacatgataattcat 42477819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 44333201 - 44333576
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || |||||||||||||||      ||||| |||||||       ||| |||||||||||| ||||||||||| ||    
T  44333201 ttaaatacaaataagtctctgactctgcacttccgttatcact------agtccttgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 44333294  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||  |||||||||||||| |||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  44333295 tgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 44333394  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||  |||||||||||| |||||| ||  |||||||||||||||| |||    
T  44333395 ctcaaatccctaaatttcaactaattctctcatttgttcaagattaatcttccaacaaacacaacttattgttaggtccttgactgtgcatacttactat 44333494  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44333495 cagttaggtccctgacgatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 44333576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 48788733 - 48788359
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||    | ||||||||       | | ||| |||||||| ||||||||||| ||    
T  48788733 ttaaatataaataagtctctgactctgcacttccgttatcactttagt----ctctgacgttaaaaaaatttgttaggtgatgatgtggcgcatatgagg 48788638  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| |||||||||||||| |||||||||||| || ||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  48788637 tgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaaattcttaaat 48788538  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||    
T  48788537 ctcaaatccct---tgtcatttaattctctcttttgttcaaaattaatcttccattaaacacaacttattgttaggtccctgactgtgcatacttactat 48788441  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48788440 cagttaggtcccttacaatgaattagcaaatacattagcatctattattcttgattattgttatattcacatgataattcat 48788359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 48646111 - 48646488
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||||||    | ||| ||||       | |||||||||||||| ||||||||||  ||    
T  48646111 ttaaatacaaataagtccctgactctacacttccgttatcactttagt----ctctgtcgttaaaaaaatatattaagtgatgatgtggcgcatataagg 48646206  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| || ||||||| |||||||| ||||| |||||||||  || | |||||||||  |||||||| |||||||||||||||||||||||||| |||||    
T  48646207 tgtcacagagaccaaagtgaaagtaaaaaatggtcactttgtcct-tgaaccaaaaattaatatttctaaattgaatatcaaattcctaaatccctaaat 48646305  T
Q  201 ctcaaatccctaaatgtcatct-aattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-ta 298  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||    
T  48646306 ctcaaatccctaaatgtcatcttaattctcttttttgttcaaaattaatcttccattaaatacaacttactgttaggtccctgactgtgcatacttacta 48646405  T
Q  299 tcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48646406 tcagttaggtccctgacaatgaataagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 48646488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 10899134 - 10898826
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  10899134 ttaaatacaaataagtctctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 10899039  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| ||||||||||  ||||||||||||| ||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||||||| |||| ||    
T  10899038 tgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaattcttacat 10898939  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |||    
T  10898938 ctcaaatccctaaatgtcatctaattctctcatttgttcaaaattaatcttccattaaacacaacttactgttaggtccctgactatgcatacttagtat 10898839  T
Q  300 cagttaggtctgt 312  Q
    |||||||||||||    
T  10898838 cagttaggtctgt 10898826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 45584557 - 45584256
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||| |  ||||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  45584557 ttaaatacaaataagccaatgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 45584462  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||||| |||||||| |||| ||||||||| |||||||||||| || |||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  45584461 tgtcataaggaccaaagtgaatgtagaaaatggtcactttggtccctgaaccaaaatc-aatattcccaaattgaatatcaaattcctaaatccttaaat 45584363  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||    
T  45584362 ctcaaatccctaaatgtcatctaattatcttttttgatcaaaatcaatcttccattaaacatcaacctactgttaggtccctgactgtgcatacttacta 45584263  T
Q  299 tcagtta 305  Q
    |||||||    
T  45584262 tcagtta 45584256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 189 - 378
Target Start/End: Original strand, 45583832 - 45584023
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgt 287  Q
    |||||| ||||||| |||||| | |||||||||||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||| || |||||| |    
T  45583832 aaatccctaaatcttaaatcctttaatgtcatctaattatcttttttgatcaaaatcaatcttccattaaacaccaacttactgttaggtccctgactat 45583931  T
Q  288 gcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataatt 378  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45583932 gcatacttactatcagttaggtcattgacaatgaattagcaaatcgattagcatctattactcttgattattgttatattcacatgataatt 45584023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 30925069 - 30924763
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||    | ||||||||       ||| |||||||||||| ||||||||||| ||    
T  30925069 ttaaatacaaataagtctctgactatgcacttccgttattactttagt----ctctgacgttaaaaaa-tctgttaagtgatgatgtggcgcatatgagg 30924975  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| || || |||| |||||||||||||| ||||||||| ||| | ||||||||| ||||||  |||||||||||||||||| |||||||| |         
T  30924974 tgtcacagtgatcaaagtgaaagtagaaaatggtcactttgatctatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatctt----- 30924880  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
       |||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| || |||||| |||||||||||||||||||| ||    
T  30924879 ---aaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctattgttaggtctctgactgtgcatacttacta 30924783  T
Q  299 tcagttaggtctgtgacaat 318  Q
    |||||||||||  |||||||    
T  30924782 tcagttaggtccctgacaat 30924763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 48647504 - 48647198
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||| ||| || ||||  ||||||||||||||    ||||||||||       ||| |||||||||||| || | |||||| ||    
T  48647504 ttaaatacaaataagtctctcactctgcacttttgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatttgacacatatgagg 48647409  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| |||||||||||||| |||||||| ||| || ||||||||| ||||||  |||||||||||| ||||| |||| |||| |||||    
T  48647408 tgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatccctatatccctaaat 48647309  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| ||||| |||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| ||  ||| |||||||||||| ||    
T  48647308 cttaaatccttaaatatcatctaattatctattttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccttgattgtgcatacttacta 48647209  T
Q  299 tcagttaggtc 309  Q
    | |||||||||    
T  48647208 ttagttaggtc 48647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 35729143 - 35728900
Alignment:
Q  5 atacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatggggtgtc 104  Q
    ||||||||||||| |||||| || ||||||| ||||||| ||||    ||||||| ||       ||| |||||||||||| ||||||||||| |||||     
T  35729143 atacaaataagtcactgactctgcacttccgctatcactgtagt----ccctgacattaaataaatctgttaagtgatgatgtggcgcatatgaggtgtt 35729048  T
Q  105 atagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctca 204  Q
    ||| |||||||| |||||||||||| | |||||||||||| || ||||||||| ||||||| |||||||||||||        ||||||| ||||||| |    
T  35729047 atatggaccaaagtgaaagtagaaagtggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatat--------taaatccctaaatctta 35728956  T
Q  205 aatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaac 260  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35728955 aatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaac 35728900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 7259745 - 7259448
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  7259745 ttaaatacaaataagtccctgactctacacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 7259650  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| ||||| |||||||| |||||||||||| || |||||||||  |||||  ||||||||||||||        |||||| |||||    
T  7259649 tgtcacaaggaccaaagtgaaa-tagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatatc--------aaatccctaaat 7259559  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||||||| ||||||| ||| ||||| ||||||| ||||||| |||||||| |||  || | |||| || ||||||||||||||||| ||    
T  7259558 cttaaatccttaaatgtcctctaattatcttttttgctcaaaatcaatcttctattaaacatcaatctattattaggtccctgactgtgcatacttacta 7259459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 100 - 306
Target Start/End: Complemental strand, 7509419 - 7509210
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaatt-gtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaa 198  Q
    |||||||| |||| ||| ||||||||||||| | |||||||||||| || ||||||||| ||||||  ||||||||||| |||||| |||||| || |||    
T  7509419 gtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaaacccctaa 7509320  T
Q  199 atctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta- 296  Q
    ||||||||||||||||| |||| |||||| |||| ||||||||||| || ||||||||||| | |||| |||| |||  ||| ||||||||||||||||     
T  7509319 atctcaaatccctaaatatcatttaattcactctcttgttcaaaatcaaccttccattaaatatcaacgtactcttaagtctttgactgtgcatacttac 7509220  T
Q  297 tatcagttag 306  Q
    ||||||||||    
T  7509219 tatcagttag 7509210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 70 - 309
Target Start/End: Original strand, 10894470 - 10894711
Alignment:
Q  70 tctattaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttcca 169  Q
    |||||||||||||||| ||||||||| | ||||||| | | |||||| |||||||||||||| |||||||| ||| ||  |||||||| | ||||  |||    
T  10894470 tctattaagtgatgatgtggcgcatacgaggtgtcacatgcaccaaagtgaaagtagaaaatggtcactttagtccctggaccaaaaatc-atatcccca 10894568  T
Q  170 aattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaat-tctctcttttgttcaaaattaatcttccattaaaca-caactt 267  Q
    ||||||||||||||| |||||||||  |||||| |||| | ||||||||||||||| ||| | |||| |||||||| ||||||| |||||||| |||  |    
T  10894569 aattgaatatcaaatccctaaatccgaaaatcttaaattcttaaatgtcatctaatatctttttttttttcaaaatcaatcttctattaaacaccaatct 10894668  T
Q  268 actgttagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    | |||||| | |||||||||||||||||| || ||||||||||    
T  10894669 aatgttaggtatctgactgtgcatacttactaccagttaggtc 10894711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 309
Target Start/End: Complemental strand, 44334442 - 44334214
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| |||| |||||| | ||||| | |||||||| |||||||||||||| ||||||||||||  | ||||||||| ||||||  |||||||    
T  44334442 ttaagtgatgatgtggcacatatgagatgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaatt 44334343  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgt 272  Q
    |||||||        |||||| ||||||| |||| | |||||||||||||||| ||||||||||||||||| | | || ||||||||| |||| |||| |    
T  44334342 gaatatc--------aaatccctaaatcttaaattcttaaatgtcatctaattatctcttttgttcaaaatcattatttcattaaacaccaacctactat 44334251  T
Q  273 tagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    ||| || || |||||||||||||| |||||||||||||    
T  44334250 taggtc-cttactgtgcatacttactatcagttaggtc 44334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 12221486 - 12221609
Alignment:
Q  128 aaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattc 227  Q
    |||| |||| ||||||| || ||||||| | ||||||  ||||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||    
T  12221486 aaatggtcaatttggtccctgaaccaaagatcaatatccccaaattgaatatcaaatttctaaatccctaaatctcaattctctaaatgtcatctaattc 12221585  T
Q  228 tctcttttgttcaaaattaatctt 251  Q
    ||||||||||||||||||||||||    
T  12221586 tctcttttgttcaaaattaatctt 12221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 118 - 309
Target Start/End: Original strand, 39708304 - 39708489
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgt 217  Q
    |||||||||||||| |||||||||| | || ||||||||| |||||||  |||||||||| |||||| |||||||| | || |||        |||||||    
T  39708304 tgaaagtagaaaatggtcactttggaccctaaaccaaaaatcaatattctcaaattgaatttcaaatccctaaatcttaaattct--------taaatgt 39708395  T
Q  218 catctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    |||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||| || ||||||||| ||||||| |||||||| ||||    
T  39708396 catctaattctctcttttgttcaaaatcgatcttccattaaacattaacttactgttaggtccctgactgtgtatacttactatcagtttggtc 39708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 42478263 - 42478111
Alignment:
Q  72 tattaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaa 171  Q
    |||||| ||||||| ||||||||||| ||||||||||| | |||| |||||||||||||| ||||||||||||  | ||| ||||| ||||||  || ||    
T  42478263 tattaattgatgatgtggcgcatatgaggtgtcatagg-atcaaagtgaaagtagaaaatggtcactttggtccatgaacaaaaaatcaatatcccctaa 42478165  T
Q  172 ttgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaat 225  Q
    ||||||||||||| |||||| || ||||||| |||||| ||||| |||||||||    
T  42478164 ttgaatatcaaatccctaaacccataaatcttaaatccttaaatatcatctaat 42478111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 10895412 - 10895344
Alignment:
Q  313 gacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10895412 gacaatgaattagcaaatccattagcatttattactcttgattattgttatattcacatgataattcat 10895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 100 - 274
Target Start/End: Complemental strand, 6680479 - 6680311
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| |||||| ||| |||||||||||||| |||| ||| ||| || ||||||||| ||||||  ||||||||||| | |||||| ||||||          
T  6680479 gtgtcaaagggactaaagtgaaagtagaaaatagtcattttagtccctaaaccaaaaatcaatatccccaaattgaattttaaattcataaatc------ 6680386  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatctt-ccattaaacac-aacttactgtta 274  Q
      |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||    
T  6680385 --tcaaatccctaaatatcatctaattctctcttttgttcaaaatcaatcttcccattaaacactaacttattgtta 6680311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 33607385 - 33607272
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| | || ||||||||| || |||||| ||||||||||    
T  33607385 aatcttaaatccctaaatgtcatctaattctctcttttgtttaaaatcattcttccattaaacacctacctactgttaggtccctgactttgcatactta 33607286  T
Q  297 -tatcagttaggtc 309  Q
     |||||||||||||    
T  33607285 ctatcagttaggtc 33607272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 12223653 - 12223456
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| | ||||| ||| || ||| |||||||| ||||||||||||||| ||  | ||||||||| ||||||  ||||||||||| |||||| ||||||    
T  12223653 catatgagttgtcacaggaactaaagtgaaagtaaaaaattgtcactttgatccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaa 12223554  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgca 290  Q
    |         |||||||| ||||||||||||||||  |||||| ||||||||| |||||||||||||||| ||||||| | |||| || |||| ||||||    
T  12223553 tt--------tcaaatccataaatgtcatctaattacctctttagttcaaaatcaatcttccattaaacaccaacttattattaggtccctgaatgtgca 12223462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 43457616 - 43457788
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||||| ||||||| || ||| ||| |||||||| ||||| |||||||||||| || | ||||||| ||||||  | ||||||||| |||||| | |||    
T  43457616 gcatatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctga-ccaaaaatcaatatccctaaattgaatctcaaatccttaa 43457714  T
Q  191 atccttaaatctcaaatccctaaatgtcatctaat--tctctcttttgttcaaaattaatcttccattaaacac 262  Q
    |||   |||||||||| |||||||| |||||||||  ||||||||||||||||||| |||| || |||||||||    
T  43457715 atcaccaaatctcaaacccctaaatatcatctaattctctctcttttgttcaaaatcaatcatcaattaaacac 43457788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 32794657 - 32794564
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgtgcatactta 296  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||| |||||| || |||||||||||||||||    
T  32794657 aaatccctgaatgtcatctaatgctctcttttgttcaaaatcaattttccattaaacacaaacttattgttaggtccctgactgtgcatactta 32794564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 34710261 - 34710160
Alignment:
Q  196 taaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatact 294  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||| | ||||||| | ||||||    
T  34710261 taaatttcaaatccttaaatgtcatctaattctctcttttgttcaaaattaatttttcattaaacatcaatttactgttaggtatctgactatacatact 34710162  T
Q  295 ta 296  Q
    ||    
T  34710161 ta 34710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 46287343 - 46287219
Alignment:
Q  107 agggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaa 206  Q
    |||||||||| |||||||||||| | |||||||| ||| || || |||||| ||||||| | |||||||||  ||||| |||||||||||||||||||||    
T  46287343 agggaccaaagtgaaagtagaaa-tagtcactttagtccctaaatcaaaaatcaatattcctaaattgaat--caaatccctaaatccttaaatctcaaa 46287247  T
Q  207 tccctaaatgtcatctaattctctctttt 235  Q
    | | |||||||||||||||||||| ||||    
T  46287246 t-cttaaatgtcatctaattctctttttt 46287219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 48777388 - 48777536
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttcc-aaat 172  Q
    |||||||||||| || |||||||| ||||||| |||||||||| ||||| |||||||| ||||||||| |  || |||| |||| ||||||  || ||||    
T  48777388 ttaagtgatgatgtgacgcatatgaggtgtcacagggaccaaagtgaaaatagaaaatggtcactttgattcctgaacc-aaaatcaatatccccaaaat 48777486  T
Q  173 tgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatct 222  Q
    ||||| |||||| ||||||||| ||||| | |||||| ||||||||||||    
T  48777487 tgaatttcaaatccctaaatccctaaattttaaatccttaaatgtcatct 48777536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 316
Target Start/End: Complemental strand, 19433860 - 19433666
Alignment:
Q  121 aagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcat 220  Q
    ||||||||||| |||| ||||||  || ||| ||||| ||||||  ||||||||||| || ||| || || |||  |||||| |||||||| ||||||||    
T  19433860 aagtagaaaatggtcattttggttcctgaactaaaaatcaatatccccaaattgaatctctaatccccaactcccaaaatctgaaatccctgaatgtcat 19433761  T
Q  221 ctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagttaggtctgtgaca 316  Q
     ||||| ||| ||||||||  ||| |||||||||||||||| ||||||||| |||| || || | |||||||||||| |||||||||| ||| |||||    
T  19433760 ttaattatctattttgttc--aatcaatcttccattaaacaccaacttactattaggtccctta-tgtgcatacttactatcagttagatctctgaca 19433666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 262
Target Start/End: Complemental strand, 43461692 - 43461526
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||||| ||||||| | | || ||| |||||||| ||||| ||||||||| || || ||||||||| ||||||  |  |||||||| |||||| |||||    
T  43461692 gcatatgaggtgtcacatgaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaaaaatcaatatccctcaattgaatctcaaatccctaa 43461593  T
Q  191 atccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 262  Q
    |||  ||||||||||| |||    |||||||||||||||| ||| ||||||||| |||| ||||||||||||    
T  43461592 atcactaaatctcaaacccc----tgtcatctaattctct-tttcgttcaaaatcaatcatccattaaacac 43461526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 5929987 - 5929886
Alignment:
Q  196 taaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca-acttactgttagctctctgactgtgcatact 294  Q
    |||||||||||||| |||||||||| |||||||||||||  |||||||| | |||| ||||||||||| | ||||| |||  ||||| ||||||||||||    
T  5929987 taaatctcaaatccataaatgtcatttaattctctctttcattcaaaatcagtctttcattaaacacacatttactattatatctctaactgtgcatact 5929888  T
Q  295 ta 296  Q
    ||    
T  5929887 ta 5929886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 44529541 - 44529642
Alignment:
Q  196 taaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatact 294  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | ||||||  | |||  || |||||||||||||||    
T  44529541 taaatcttaaacccctaaatgtcatctaattatctcttttgttcaaaatcaatcatccattaaaaatcaacttcattttaagtccctgactgtgcatact 44529640  T
Q  295 ta 296  Q
    ||    
T  44529641 ta 44529642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 32793423 - 32793543
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    |||||||||| ||| |||||| ||||||||||| ||||||||||||| |||||| ||||||| | ||||||| |  ||  ||||||| ||||||||||||    
T  32793423 aatctcaaatacctgaatgtcttctaattctctattttgttcaaaatcaatctttcattaaataccaacttatttgtaagtctctgattgtgcatactta 32793522  T
Q  297 -tatcagttaggtctgtgaca 316  Q
     |||||||||| ||| |||||    
T  32793523 ctatcagttagatctctgaca 32793543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 34707858 - 34707982
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttcca-ttaaaca-caacttactgttagctctctgactg 286  Q
    |||||| |||||||||||| | |||||||||| ||||||||||||||||||||||| ||| ||||| ||||||| ||||||||| | || ||  ||| |     
T  34707858 aaatccctaaatctcaaattcttaaatgtcatataattctctcttttgttcaaaatcaattttccatttaaacaccaacttactataagatccatgatta 34707957  T
Q  287 tgcatactta-tatcagttaggtct 310  Q
    |||||||||| ||||||||| ||||    
T  34707958 tgcatacttactatcagttaagtct 34707982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 270
Target Start/End: Original strand, 33060992 - 33061157
Alignment:
Q  114 aaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat-------ctcaaa 206  Q
    |||||||||| ||||||||||| ||||||||  | ||| ||||| |||| |  | | ||||||| |||||| ||||||||| |||||       || |||    
T  33060992 aaaatgaaagcagaaaattgtcgctttggtccttaaactaaaaatcaatttccctagattgaatctcaaatccctaaatccataaatagtaaatcttaaa 33061091  T
Q  207 tccctaaatgtcatctaattctctcttttgttcaaaatta-atcttccattaaaca-caacttact 270  Q
    ||||||||||| || ||||| ||||||||||||||||| | ||||||||||||||| |||||||||    
T  33061092 tccctaaatgttatttaattatctcttttgttcaaaatcatatcttccattaaacaccaacttact 33061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 46286690 - 46286772
Alignment:
Q  110 gaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    |||||||||||||||||||||| ||||||||| ||  | ||||||||| ||||||| ||||||| ||| |||||| |||||||    
T  46286690 gaccaaaatgaaagtagaaaatagtcactttgatccttgaaccaaaaatcaatattcccaaattaaatttcaaatccctaaat 46286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 8047072 - 8047145
Alignment:
Q  188 taaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    ||||||| ||||||||||||| |||||| |||||||||| |||||||||||||| || ||| || |||||||||    
T  8047072 taaatccctaaatctcaaatcactaaatatcatctaattatctcttttgttcaatatcaatatttcattaaaca 8047145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 24935649 - 24935511
Alignment:
Q  109 ggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcc----ttaaatctca 204  Q
    |||| ||| |||||||| |||| |||||||||| || || ||| ||||| || |||  ||||||||||| ||||||||||||||||    || |||||      
T  24935649 ggactaaagtgaaagtaaaaaaatgtcactttgatccctgaactaaaaatca-tatcaccaaattgaatctcaaattcctaaatcccaaatttaatcttc 24935551  T
Q  205 aatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    ||||||||||| || | |||||| ||||||||||||||||    
T  24935550 aatccctaaatatcttttaattccctcttttgttcaaaat 24935511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13578381 - 13578334
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    
T  13578381 ttaaatacaaataagtcactgactctgcacttccgttatcactttagt 13578334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44530672 - 44530625
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||    
T  44530672 ttaaatataaataagtctctgactctgcacttccgttatcactttagt 44530625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 39824306 - 39824471
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| |||||| ||| |||||||||||||| |||||||| | | || ||    ||| ||||||| ||||||||||| |||||| | ||||| || ||     
T  39824306 gtgtcacagggactaaagtgaaagtagaaaatggtcactttagcccctgaat---aaatcaatattcccaaattgaatttcaaatccataaattctaaat 39824402  T
Q  200 t-----ctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    |     ||||||||| ||||| |||| |||||| | ||||||||||||||  |||||||||||||||||    
T  39824403 ttaatcctcaaatccttaaatctcatttaattcacccttttgttcaaaatcaaatcttccattaaacac 39824471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 24934972 - 24935045
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||||||||||| ||||||||| || || |||| |||| ||||||| | ||||||||| |||||| ||||||    
T  24934972 tgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaaa 24935045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46286565 - 46286610
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcacttta 46  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||    
T  46286565 ttaaatacaaataagtctctgactctgcacttctgttatcacttta 46286610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43457519 - 43457567
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    ||||||||||||||||| | |||| || |||||||||||||||||||||    
T  43457519 ttaaatacaaataagtccccgactctgcacttccgttatcactttagtt 43457567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 48249823 - 48249883
Alignment:
Q  179 tcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttc 239  Q
    |||||||||||||||  ||||||| |||||| || ||||||| ||| ||||||||||||||    
T  48249823 tcaaattcctaaatcactaaatcttaaatccttacatgtcatataactctctcttttgttc 48249883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8374976 - 8375023
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| |||| ||||| |||| ||||||||||||||||||||    
T  8374976 ttaaatacaaaaaagtttctgattttgcacttccgttatcactttagt 8375023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 48777318 - 48777365
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||| || |||||| || ||||||||||||||||||||    
T  48777318 ttaaatacaaataattccctgactctgcacttccgttatcactttagt 48777365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8048845 - 8048800
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcacttta 46  Q
    ||||||||||| ||||||| |||| || ||||||||||||||||||    
T  8048845 ttaaatacaaagaagtctccgactctgcacttccgttatcacttta 8048800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 33607469 - 33607368
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||||| ||||||| | |||| ||| |||||||| ||| | ||||||||||||  |  |||||||| ||||||  ||||||||||| | |||| |||||    
T  33607469 gcatatgaggtgtcaaatggactaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaatccctaa 33607370  T
Q  191 at 192  Q
    ||    
T  33607369 at 33607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 385014 - 385089
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcc 194  Q
    |||||||||||||||||||||||| ||| | || | |||| ||||| | ||||||| ||| |||||||| |||||||    
T  385014 tgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaata-tcccaaattaaatctcaaattcttaaatcc 385089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 8375569 - 8375505
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    |||||| || ||| ||| |||||||||||||| |||||||| ||| || ||||||||| ||||||    
T  8375569 gtgtcacagagactaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatat 8375505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 39708168 - 39708212
Alignment:
Q  4 aatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||| ||||| | ||||||| ||||||||||||||||||||    
T  39708168 aatacaaagaagtcaccgactttgcacttccgttatcactttagt 39708212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 36280378 - 36280001
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||    ||||||||||       | | |||||||||||| ||||||||||| ||    
T  36280378 ttaaatataaataagtctctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatatgttaagtgatgatgtggcgcatatgagg 36280283  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | ||||||||||||||| ||||||| |||||||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  36280282 tgtcacacggaccaaaatgaaagaagaaaatggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 36280183  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||| |||    
T  36280182 ctcaaatccctaaatgtcatttaattctctcttttgttcaaaattaatcttccattaaacacaacttaatgttaggtccctgactgtgcataattactat 36280083  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  36280082 cagttaggtccctgacaatgaattagcaaattcattagcatctattagtcttgattattgttatattcatataataattcat 36280001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 55389461 - 55389154
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| |||| |||||| ||||||| |||||||||| |||||||||||||| |||||||||||| || |||| |||| ||||||| |||||||    
T  55389461 ttaagtgatgatgtggcacatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatattcccaaatt 55389362  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  55389361 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatattccattaaacacaacttactctt 55389262  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || ||||||||||||| ||| |||||||||||||  |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  55389261 aggtccctgactgtgcatatttactatcagttaggtccatgacaatgaattagcaaatcaattatcatct-ttactcttgattattgttatattcacatg 55389163  T
Q  373 ataattcat 381  Q
    |||||||||    
T  55389162 ataattcat 55389154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 53959161 - 53958786
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||   ||||| || ||||||||||||||||||||    | ||||||||       | | |||||||||||| ||||||||||| |     
T  53959161 ttaaatacaaataagttcatgactctgcacttccgttatcactttagt----ctctgacgttaaaaaaatttgttaagtgatgatgtggcgcatatgagc 53959066  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| ||||||||||||||||||||||||| | || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  53959065 tgtcacagggaccaaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaat 53958966  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| || || ||||||||||||||||| |||    
T  53958965 ctcaaat-cttaaatgtcatctaattctctcttttgttc-aaattaatcttccattaaacacaacttgttgtaaggtccctgactgtgcatacttactat 53958868  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53958867 cagttaggtctctgacaatgaattagcagatccattagcatctattacttttgattattgttatattcacatgataattcat 53958786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 17700580 - 17700958
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnn-tctattaagtgatgatatggcgcatatggg 99  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    ||||||||||        ||| ||||  |||||| || |||||||| |    
T  17700580 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaaatctgttaaacgatgatgtgccgcatatgag 17700675  T
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| |||||||||| |||||||||||||| |||||||||||| || ||| ||||| ||||| | | |||||||||||||||||||||||| ||||||    
T  17700676 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaataatccaaaattgaatatcaaattcctaaattcttaaa 17700775  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-ta 298  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||    
T  17700776 tctcaaatccttaaatgtcatataattctctattttgttcaaaattaatcttccattaaacacaacttactgttaggtccctgactgtacatacttacta 17700875  T
Q  299 tcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17700876 tcagttaggtccctgacaatgaattagcaaatctattaacatctattactcttgattattgttatattcacatgataattcat 17700958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 48809647 - 48809340
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||||||||||| ||||||| | |||| ||| |||||||||||||| ||||||||| ||  | ||||||||| ||||||| | |||||    
T  48809647 ttaagtgatgatgtggcgcatatgaggtgtcagaaggactaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattcctaaatt 48809548  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||    
T  48809547 gaatatcaaattcctaaatacttaaatctcaaatccctaaatgtcatctaattctctattttgttc-aaattaatcttccattaaacacaatttattgtt 48809449  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || || |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48809448 aggtccctaactgtgcatacttactatcagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 48809349  T
Q  373 ataattcat 381  Q
    |||||||||    
T  48809348 ataattcat 48809340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 48573047 - 48573427
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||    || |||||||       | | ||||| |||||| | ||||||||| ||    
T  48573047 ttaaatacaaataagcctctgactctgcacttccgttatcactttagt----ccttgacgttaaaaaaatttgttaagcgatgatgttgcgcatatgagg 48573142  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| ||||||||| ||  | ||||||||| ||||||| | |||||||||||||||||||||||| |||||||    
T  48573143 tgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaattcttaaat 48573242  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaac---acaacttactgttagctctctgactgtgcatactta- 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||| || |||||||| ||||||||     
T  48573243 ctcaaatccctaaatgtcatctaattctctcttttattcaaaattaaccttccattaaacacaacaacttactgttaggtccctgactgtacatacttac 48573342  T
Q  297 tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||||   |||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48573343 tatcagttaggtgcatgacgatgaattagcaaatatattagcatctattactcttgattattgttatattcacatgataattcat 48573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 175 - 381
Target Start/End: Original strand, 52317146 - 52317352
Alignment:
Q  175 aatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtta 274  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52317146 aatatcaaattcctaaatccttaaatttcatatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaatttactgtta 52317245  T
Q  275 gctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatga 373  Q
    | || ||| |||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  52317246 ggtccctg-ctgtgcatacttacaatcagttaggtctctgacaataaattagcaaatccattagcatctattactcttgagtattgttatattcacataa 52317344  T
Q  374 taattcat 381  Q
    ||||||||    
T  52317345 taattcat 52317352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 48574520 - 48574207
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || |||| |||||||||||||||    || |||||||       ||| |||| ||||||| ||||||||||| ||    
T  48574520 ttaaatacaaataagtccctgactctgcactttcgttatcactttagt----ccttgacgttaaaaaaatcttttaaatgatgatgtggcgcatatgagg 48574425  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||  | ||||||||  ||||||  ||||||||||||||||||  |||||||| |||||    
T  48574424 tgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaaatccctaaat 48574325  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||||||||| ||||| ||| ||||||||||||| |||| |||||||||||| ||| || |||||| || ||||||||||||||||| ||    
T  48574324 cttaaatccttaaatgtcatataattatcttttttgttcaaaatcaatcatccattaaacactaacctattgttaggtccctgactgtgcatacttacta 48574225  T
Q  299 tcagttaggtctgtgaca 316  Q
    |||||||||||| |||||    
T  48574224 tcagttaggtctctgaca 48574207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 36279014 - 36279312
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||    ||||||||||       ||| |||||||||||| || | |||||| ||    
T  36279014 ttaaatacaaataagtctctgactctgcacttccgttatcattttagt----ccctgacgttaaaaaattcttttaagtgatgatgtgacacatatgagg 36279109  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||||||| || |||||||||  |||||  ||||||||||||||        |||||| |||||    
T  36279110 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaatatc--------aaatccctaaat 36279201  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||| ||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||    
T  36279202 cttaaatccttaaaagtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgactgtgcatacttacta 36279301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 2591689 - 2591941
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||| |||||||||||| || |||||| | |||||||||||    |||||| |||       ||| |||||||||||||||||  ||||| ||    
T  2591689 ttaaatacaaacaagtctctgactctgcacttccatgatcactttagt----ccctgatgttaagttattctgttaagtgatgatatggc--atatgagg 2591782  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaa-tatcaaattcctaaatccttaaa 199  Q
    ||||| | |||| ||| |||||||| ||||||| |||||||||| || || |||||| |||||| || |||||||| | |||||||||||||| ||||||    
T  2591783 tgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctcgaaattgaaatctcaaattcctaaattcttaaa 2591882  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaa 258  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  2591883 tctcaaatctctaaatgtcatctaattctctcttttgttcaaaatcaatcatccattaa 2591941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 52318378 - 52318080
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||| | ||| ||||||||    ||||||||||       ||| ||||||||||||  | |||||||| ||    
T  52318378 ttaaatacaaataagtccctgactctgcacttctgatattactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgagacgcatatgagg 52318283  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | || ||||| |||||||||||||| ||||||||||||  | ||||||||| ||||||  |||||||||||||||||| |||||||| |         
T  52318282 tgtcacaaggtccaaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaattgaatatcaaatccctaaatctt----- 52318188  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
       |||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| || |||||| ||| | |||||||||||||| ||    
T  52318187 ---aaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctattgttaggtctttaactgtgcatacttacta 52318091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 309
Target Start/End: Original strand, 55388216 - 55388429
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||  |||||||||||||||||| ||||||| | ||||    
T  55388216 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaattcctaaa 55388315  T
Q  200 tctcaaatccctaaatgtcatctaat--tctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    ||| |||||| |||||||||||||||  ||| | ||||||||||||| ||| ||| |||||||| |||| ||||||||  |  |||||||||||||||||    
T  55388316 tcttaaatccttaaatgtcatctaattatcttttttttgttcaaaatcaatattctattaaacaccaacctactgttaagttcctgactgtgcatactta 55388415  T
Q  297 -tatcagttaggtc 309  Q
     |||||||||||||    
T  55388416 ctatcagttaggtc 55388429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 17701980 - 17701683
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnn-tctattaagtgatgatatggcgcatatggg 99  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    ||||||||||        ||| |||| ||| ||| ||||||||||| |    
T  17701980 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaaatctgttaaatgacgatgtggcgcatatgag 17701885  T
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| |||||||||| |||||           ||||||||||| || || |||||| ||||||| |||||||||||||||||| || |||| | ||||    
T  17701884 gtgtcacagggaccaaagtgaaa-----------tcactttggtccctgaagcaaaaatcaatattcccaaattgaatatcaaatcccaaaattcctaaa 17701796  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgtt-caaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta- 296  Q
    ||| |||||| || |||||||  |||| ||| |||||||  |||||||||||||||||||||| |||| ||||||||| || |||||||||||||||||     
T  17701795 tcttaaatccttacatgtcatacaattatcttttttgttataaaattaatcttccattaaacaccaacctactgttaggtccctgactgtgcatacttac 17701696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 309
Target Start/End: Original strand, 48808508 - 48808730
Alignment:
Q  79 tgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaata 178  Q
    ||||||| ||||||||||| ||||||| || ||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||| ||||||||||||    
T  48808508 tgatgatgtggcgcatatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaata 48808607  T
Q  179 tcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctctttt-gttcaaaattaatcttccattaaacac-aacttactgttagc 276  Q
    |||||| |||||||| |        |||||| ||||| | |||||||| ||| |||| | ||||||| |||||||||   ||||| ||| ||||||||      
T  48808608 tcaaatccctaaatctt--------aaatccttaaatattatctaattatctttttttgctcaaaatcaatcttcca---aacaccaacctactgttatg 48808696  T
Q  277 tctctgactgtgcatactta-tatcagttaggtc 309  Q
    |  ||||||||||||||||| |||||||||||||    
T  48808697 ttcctgactgtgcatacttactatcagttaggtc 48808730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 53957804 - 53957930
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| || | |||||| |||||||  ||||||||| ||||||||||||||  | ||||| |||  | ||||||||| ||||||  |||||||    
T  53957804 ttaagtgatgatgtgacacatatgaggtgtcacggggaccaaagtgaaagtagaaaatgattactttagtccatgaaccaaaaatcaatatccccaaatt 53957903  T
Q  174 gaatatcaaattcctaaatccttaaat 200  Q
    |||| |||||| |||||||||||||||    
T  53957904 gaatgtcaaatccctaaatccttaaat 53957930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 36827333 - 36827231
Alignment:
Q  196 taaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaac-acaacttactgttagctctctgactgtgcatac 293  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||| |||||||| |||||||  |||||  || |||||||| |||||    
T  36827333 taaatctcaaatccttaaatgtcaactaattctctcttttgttcaaaatcaaatctttcattaaacaacaacttgttgttatgtccctgactgtacatac 36827234  T
Q  294 tta 296  Q
    |||    
T  36827233 tta 36827231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 40206163 - 40206237
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaatt-aatcttccattaaacac 262  Q
    |||||| ||||||||||||| |||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
T  40206163 aaatccctaaatctcaaatctctaaatctcatctaatttcctctttagttcaaaattaaatcttccattaaacac 40206237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 33837334 - 33837404
Alignment:
Q  114 aaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    |||||||||||||||||| |||||||||||| || ||||||||| ||||||  ||| ||||||| ||||||    
T  33837334 aaaatgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaat 33837404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 19115133 - 19115020
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| | |||| ||| ||||||||||||||   |||||| |||  | ||| ||||| ||||||  |||| |||||||||| || || |||||||||||    
T  19115133 gtgtcacatggactaaagtgaaagtagaaaataaccactttagtccatgaactaaaaatcaatatccccaatttgaatatcatatccccaaatccttaaa 19115034  T
Q  200 tctcaaatccctaa 213  Q
    ||||||||||||||    
T  19115033 tctcaaatccctaa 19115020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11773112 - 11773065
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||    
T  11773112 ttaaatacaaataagtctctgactctacacttccgttatcactttagt 11773065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 47075317 - 47075245
Alignment:
Q  120 aaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||||  |||| |||||| | |||| |||||||    
T  47075317 aaagtagaaaattgtcactttagtccctgaaccaaaaatcaatatccccaacttgaatcttaaatccctaaat 47075245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2592068 - 2592021
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  2592068 ttaaatacaaataagtccctgactcaatacttccgttatcactttagt 2592021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19114595 - 19114642
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  19114595 ttaaatacaaagaagtcactaactttgcacttccgttatcactttagt 19114642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 20464260 - 20464339
Alignment:
Q  114 aaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||||||||||||||||| ||||||||||||  | || |||||| ||||||  |||| |||||  |||||| ||||||||    
T  20464260 aaaatgaaagtagaaaatggtcactttggtccatgaatcaaaaatcaatatccccaatttgaacctcaaatccctaaatc 20464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 40317941 - 40318011
Alignment:
Q  114 aaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    |||| ||||||||||||| |||||||||||| || || |||||| ||||||| | ||||| ||| ||||||    
T  40317941 aaaacgaaagtagaaaatagtcactttggtccctgaatcaaaaatcaatattccaaaattaaatctcaaat 40318011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3671100 - 3671145
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcacttta 46  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||||    
T  3671100 ttaaatacaaataagtctatgactctccacttccgttatcacttta 3671145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 33837534 - 33837485
Alignment:
Q  195 ttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||| ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  33837534 ttaattctcaaatctctaaatctcatttaattccctcttttgttcaaaat 33837485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34263867 - 34263912
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcacttta 46  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||    
T  34263867 ttaaatacaaataagtctctgactctacacttccattatcacttta 34263912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 45599050 - 45599106
Alignment:
Q  109 ggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatt 165  Q
    |||| |||||||||||||||||| |||||||| ||  || ||||||||| |||||||    
T  45599050 ggactaaaatgaaagtagaaaatggtcactttagttcctgaaccaaaaatcaatatt 45599106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 35178865 - 35178489
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||| | || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  35178865 ttaaatacaaataagtccctgattctgcacttccgttatcactttagt----ccctgacgttaaaaaa-tctgttaagtgatgatgtggcgcatatgagg 35178771  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    |||||||||||||||| ||||| ||||||||  ||||||||| | || ||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  35178770 tgtcatagggaccaaagtgaaactagaaaatgatcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcttaaatccttaaat 35178671  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||||||| ||| |||    
T  35178670 ctaaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttaccgttaggtccctcactgtgcatatttactat 35178571  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35178570 caattaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 35178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 74 - 381
Target Start/End: Original strand, 10406337 - 10406630
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  10406337 ttaagtgatgatgtggcgcatatgaggtgtcacagggaccaaagtgatagtagaaaatagtcactttggtctctgaaccaaaaatcaatatttccaaatt 10406436  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    |||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  10406437 gaatatcaaattcctaaat---------------ccctaaatgtcatctaattctctcttttgttcaaaattaatcttctattaaacacaacttattgtt 10406521  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10406522 aggtccctgactgtgcatacttactatcagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattgttatattaacatg 10406621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 32898506 - 32898200
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| ||    
T  32898506 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgagg 32898411  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  32898410 tgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaaatccctaaat 32898311  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
     | |||||| |||||||||||||||| ||| |||||||||| || |||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||    
T  32898310 tttaaatccttaaatgtcatctaattatcttttttgttcaatatcaatcttccattaaacaccaacctactgttaggtctctgactgtgcatacttacta 32898211  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  32898210 tcagttaggtc 32898200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 1953027 - 1952783
Alignment:
Q  5 atacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatggggtgtc 104  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    | ||||||||       ||| |||||||||||| ||||||||||| ||||||    
T  1953027 atacaaataagtctatgactctgtacttccgttatcactttagt----ctctgacgttaaataaatctgttaagtgatgatgtggcgcatatgaggtgtc 1952932  T
Q  105 atagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctca 204  Q
    |||||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||  ||||||||||||||        |||||| ||||||| |    
T  1952931 atagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatc--------aaatccctaaatctta 1952840  T
Q  205 aatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1952839 aatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaaca 1952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 10407645 - 10407343
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||| |||||||||||  | |||||| |||||||||||||||||||||    |||||||||       ||| |||||||||||| || |||||||| ||    
T  10407645 ttaaacacaaataagtccataactttgcacttccgttatcactttagtt----cctgacgttaaaaaaatctgttaagtgatgatgtgacgcatatgagg 10407550  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||||| |||||||| |||||||||||||| || ||||| |||||| ||||||||| ||||||  ||||||||||||||||| |  ||||||| ||||     
T  10407549 tgtcataaggaccaaagtgaaagtagaaaatggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaagtgttaaatccctaaag 10407450  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |  |||||| ||  ||||||| |||||||| ||    
T  10407449 cttaaatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaacctgttgttaggtccgtgactgttcatacttacta 10407350  T
Q  299 tcagtta 305  Q
    |||||||    
T  10407349 tcagtta 10407343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 35177457 - 35177761
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||  |     
T  35177457 ttaaatacaaataagtccctgactctgcacttccgttatcactttagt----ccctgacgttaaaataatctgttaagtgatgatgtggcgcatatatg- 35177551  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | |||||||| |||||||||||||| || ||||||||| || ||||||||| || |||  |||||||||||||||||| ||||||| | |||||    
T  35177552 tgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaaattcctaaat 35177651  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| ||||||||| |||||| ||| ||||||||||||| ||||||| | |||||| |||| || |||||| || |||||| |||||||||| ||    
T  35177652 cttaaatccttaaatgtcacctaattatcttttttgttcaaaatcaatcttcta-taaacaccaacctattgttaggtccctgactatgcatacttacta 35177750  T
Q  299 tcagttaggtc 309  Q
    |||||||||||    
T  35177751 tcagttaggtc 35177761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 119 - 318
Target Start/End: Complemental strand, 28619479 - 28619279
Alignment:
Q  119 gaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtc 218  Q
    |||||||||||||  |||||||  ||  | ||||||||| ||||||  ||||||||||| |||||| ||||||||| |||||  ||||| ||||||||||    
T  28619479 gaaagtagaaaatgatcactttaatccatgaaccaaaaatcaatatccccaaattgaatttcaaatccctaaatccctaaattgcaaattcctaaatgtc 28619380  T
Q  219 atctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tatcagttaggtctgtgacaa 317  Q
    |||||||||||| |||| || ||||| |||||| |||||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||  ||||||    
T  28619379 atctaattctcttttttattaaaaatcaatctttcattaaacacaacttactattaggtctctaactgtgcatacttactatcatttaggtcaatgacaa 28619280  T
Q  318 t 318  Q
    |    
T  28619279 t 28619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 118 - 309
Target Start/End: Complemental strand, 5965370 - 5965177
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgt 217  Q
    ||||||||||||||||||| |||||||| | ||  ||||| ||||||   |||||||||| ||||||  |||||| | ||||||| |||||||||| |||    
T  5965370 tgaaagtagaaaattgtcattttggtctatgaagtaaaaatcaatatccacaaattgaatttcaaatctctaaattcctaaatcttaaatccctaagtgt 5965271  T
Q  218 catctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||  ||  |||||||||||||||| ||||| |||||||    
T  5965270 catctaattatctcttttgttcaaaatcaatcttccattaaacaccaacttagtgttaagtccatgactgtgcatacttactatcaattaggtc 5965177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 92 - 287
Target Start/End: Original strand, 5737011 - 5737207
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaa-tatttccaaattgaatatcaaattcctaa 190  Q
    |||||| ||||||| | |||| ||| | |||||||||| || ||||||||||| || | ||||||| ||| |||  ||||||||||| |||||| | |||    
T  5737011 catatgaggtgtcacaaggactaaagtaaaagtagaaa-ttatcactttggtccctgatccaaaaatcaaatatccccaaattgaatctcaaatccttaa 5737109  T
Q  191 atccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgt 287  Q
    |||  ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||| || ||||||||    
T  5737110 atctctaaatctgaaatccctaaatgtcatctaattctccctttttttcaaaattaatcttccattaaacaccaacttattgttaggtccctgactgt 5737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 296
Target Start/End: Original strand, 32563828 - 32563927
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgtgcatactta 296  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  ||| ||||||||||||    
T  32563828 aatctcaaatccctaaatgccatctaattctctcttttgttcaaaattaatcttctattaaacactaacttactgttagatccatgattgtgcatactta 32563927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 5737977 - 5737808
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| | |||| ||| | |||||| ||||| ||||||||||||||| || |||||| ||||||  ||||||||||| |||||| ||||||    
T  5737977 catatgaggtgtcacatggactaaagtaaaagtaaaaaatggtcactttggtctctaaatcaaaaatcaatatccccaaattgaatctcaaatccctaaa 5737878  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttact 270  Q
    ||        |||||||  |||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||    
T  5737877 tc--------tcaaatc--taaatgtcatctaattatctcttttgttcaaaatcaatattccattaaacatcaacttact 5737808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 318
Target Start/End: Complemental strand, 32564455 - 32564227
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| | |||| ||| ||| ||||||||||  ||| ||| ||| ||| ||||||||  |||||  ||  ||||||| |||||||||||||||| ||||    
T  32564455 gtgtcacatggactaaagtgatagtagaaaatgatcattttagtcccttgaccaaaaatgaatatccccgtattgaatctcaaattcctaaatccctaaa 32564356  T
Q  200 tctcaaatccctaaatg--------tcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgca 290  Q
    ||||||||| ||||||         |||||||||||||||||||||||||||| | |||||||||||| | ||||||| ||| || |||  ||||||| |    
T  32564355 tctcaaatcgctaaatccttcaatttcatctaattctctcttttgttcaaaatcattcttccattaaataccaacttattgtaagatcttggactgtgaa 32564256  T
Q  291 tactta-tatcagttaggtctgtgacaat 318  Q
    || ||| |||||||||||||| |||||||    
T  32564255 tatttactatcagttaggtctctgacaat 32564227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 30134743 - 30134843
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| || ||| ||| |||||||||||||||||||||||||||  ||||||||||| |||||||  |||||||||| |||||| | ||||||||||||    
T  30134743 gtgtcacagagactaaagtgaaagtagaaaattgtcactttggtcctttaaccaaaaatcaatattcacaaattgaatttcaaatccttaaatccttaaa 30134842  T
Q  200 t 200  Q
    |    
T  30134843 t 30134843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 41121361 - 41121423
Alignment:
Q  202 tcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaa 264  Q
    |||||||  |||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  41121361 tcaaatctttaaatgccatctaattctctcttttgttcaaaatcaatctttcattaaacacaa 41121423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 41122690 - 41122616
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    ||||| |||||||| ||||||||| || || ||||||||| |||||| |||||||||||| ||||||||||||||    
T  41122690 tgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaattcctaaat 41122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 45476338 - 45476404
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatt 165  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||    
T  45476338 ggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatt 45476404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 45476509 - 45476415
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcc 194  Q
    |||||||| |||||||| | |||||||||||| |||||||| ||| || ||||||||| ||||||| ||||||| ||| ||||||  ||||||||    
T  45476509 gtgtcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaaatcc 45476415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 13144535 - 13144594
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaat 177  Q
    |||||||||||||||||||||||| || ||||| | |||| |||||||||||||||||||    
T  13144535 tgaaagtagaaaattgtcactttgatcccttaatcgaaaatcaatatttccaaattgaat 13144594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 41121300 - 41121366
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    |||||||||||||||||||||||||||  | ||||||||| ||||||  ||||||||||| ||||||    
T  41121300 tgaaagtagaaaattgtcactttggtccttgaaccaaaaatcaatatccccaaattgaatttcaaat 41121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 41122633 - 41122534
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac-aacttactgttagctctctgactgtgcatactta 296  Q
    |||||||||| |||||||| ||  |||||   ||||||||||||||| ||||||||||||||||| |||||| ||||||  |  ||| ||||||||||||    
T  41122633 aatctcaaattcctaaatgacacataatttcgtcttttgttcaaaatcaatcttccattaaacacaaacttattgttaggcccttgattgtgcatactta 41122534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45476224 - 45476271
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||    
T  45476224 ttaaatacaaataagtctctgactctgcacttctgttatcactttagt 45476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 2552199 - 2552255
Alignment:
Q  109 ggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatt 165  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||| |||| |||||||    
T  2552199 ggactaaagtgaaagtagaaaattgtcactttggtttctgaaccgaaaatcaatatt 2552255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 30134855 - 30134903
Alignment:
Q  262 caacttactgttagctctctgactgtgcatactta-tatcagttaggtc 309  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  30134855 caacttactgttaggtctctgattgtgcatacttactatcagttaggtc 30134903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5965503 - 5965456
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| |||||| ||||| || ||||||||||||||||||||    
T  5965503 ttaaatacaaagaagtctttgactctgcacttccgttatcactttagt 5965456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 33315029 - 33315079
Alignment:
Q  94 tatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtc 144  Q
    |||| ||||||| | |||||||| |||||||||||||| ||||||||||||    
T  33315029 tatgaggtgtcacatggaccaaagtgaaagtagaaaatagtcactttggtc 33315079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 33315112 - 33315170
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 262  Q
    |||||| || ||||||||||||||| | ||||| ||||||| ||||||| |||||||||    
T  33315112 aaatccatatatgtcatctaattctttgttttgatcaaaatcaatcttctattaaacac 33315170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 39138495 - 39138453
Alignment:
Q  221 ctaattctctcttttgttcaaaatt-aatcttccattaaacac 262  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  39138495 ctaattctctcttttgttcaaaattaaatcttctattaaacac 39138453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41754145 - 41754189
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtc 144  Q
    ||||||||||||| ||| |||||||| ||||| ||||||||||||    
T  41754145 gtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtc 41754189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 74 - 381
Target Start/End: Original strand, 32664634 - 32664941
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| | || |||||| ||||||| |||||||    
T  32664634 ttaagtgatgatgtggcgcatatgaggtgtcaaagggaccaaaatgaaagtagaaaatagtcactttggtct-tgaatcaaaaatcaatattcccaaatt 32664732  T
Q  174 gaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| |||||||||||| ||||||||||  |||||||||    
T  32664733 gaatatcaaattcctaaatccttaaatctcaaatccctaaatctgatttaattctctcttttgtttaaaattaatctttcattaaacacggcttactgtt 32664832  T
Q  274 agctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatg 372  Q
    || || |||| |||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32664833 aggtccctgattgtgcatacttactatcagttaggtccctgacaatgaattaggaaatccattagcatctattactcttgattattgttatattcacatg 32664932  T
Q  373 ataattcat 381  Q
    |||||||||    
T  32664933 ataattcat 32664941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 9341086 - 9340724
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    | ||||||||       |||||||||||||||| ||||||||||| ||    
T  9341086 ttaaatacaaataagtctctgactttgcacttctgttatcactttagt----ctctgacgttaaaaaaatctattaagtgatgatgtggcgcatatgagg 9340991  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||  ||||||| ||||| ||||||||||||||||||||||          
T  9340990 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaaatcc------ 9340897  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
             ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||    
T  9340896 ---------ctaaatgtcatctaattttctcttttgttcaaaattaatcttccattaaacacaacttactgttaggtccctgactgtgcatacttactat 9340806  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9340805 cagttaggtccctgacaatgaattagcaaatccattagcatctattactcttgattattcttatattcacatgataattcat 9340724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 52440620 - 52440244
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| |||||||||||||||| || |||||| |||||||||||||     | |||||||       | | |||||||||||| | | |||| || ||    
T  52440620 ttaaatataaataagtctctgactctgcacttccattatcactttagt-----cttgacgttaaaaaaatgtgttaagtgatgatgtagtgcatctgagg 52440526  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||| ||||| |||||||||||||| |||||||||||| || |||||||||  | |||| ||||||||||||||||||||||||||||||||||    
T  52440525 tgtcacaggggccaaagtgaaagtagaaaatagtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaaatccttaaat 52440426  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| || |  |||| ||||||||| |||    
T  52440425 ctcaaatccctaaatgtcatctaattctctcttttgtttaaaattaatctttcattaaacacaacttagtgttaggtccccaactgcgcatacttactat 52440326  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52440325 cagttaggtccttgacaatgaattagcaaatccattagcttctattactcttgattattgttatattcacatgataattcat 52440244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 7945615 - 7945258
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    ||||||||||       | |  ||||||||||| |||| |||||| ||    
T  7945615 ttaaatacaaataagtctctgactatgcacttccgttatcactttagt----ccctgacgttaaaaaaatatgctaagtgatgatgtggcacatatgagg 7945520  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| | ||| |||| |||||||||||||| |||||||||||| || ||||||||| ||||||| |||||||                    |||||||    
T  7945519 tgtcacaaggatcaaagtgaaagtagaaaatggtcactttggtccctaaaccaaaaatcaatattcccaaatt--------------------cttaaat 7945440  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-tat 299  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||    
T  7945439 ctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatcttccattaaacacaacttattgttaggtctctgactgtgcatacttactat 7945340  T
Q  300 cagttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7945339 cagttaggtccctgacaatgaattaggaaatccattagcatctattactcttgattattgttatattcacatgataattcat 7945258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 93 - 309
Target Start/End: Original strand, 6612580 - 6612798
Alignment:
Q  93 atatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    ||||| ||||||| |||||| ||| | ||||||||||||  ||||||| |||  | ||||||||| ||||||  ||||||||||| |||||| |||||||    
T  6612580 atatgaggtgtcacagggactaaattcaaagtagaaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaat 6612679  T
Q  193 ccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcat 291  Q
     | ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| | ||| | |||||||||    
T  6612680 tcctaaatctcaaatccctaaatgtcatctaattctcttttttgtttaaaatcaatcttccattaaacaccaacttactgtttgatctttaactgtgcat 6612779  T
Q  292 actta-tatcagttaggtc 309  Q
    ||||| |||||||||||||    
T  6612780 acttactatcagttaggtc 6612798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 100 - 296
Target Start/End: Original strand, 52439618 - 52439815
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| | |||||||| |||||||||||||| ||||||||| || || ||||||||| ||||||   ||||||||||||||||||||||||||| ||||    
T  52439618 gtgtcacaaggaccaaagtgaaagtagaaaatggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaaatccctaaa 52439717  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    | | |||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||| || ||||||| |||||||||    
T  52439718 ttttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaacctactgttaggtccctgactgcgcatactta 52439815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 32665831 - 32665532
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||    ||||| ||||       ||| |||||||||||| ||||||||||| ||    
T  32665831 ttaaatacaaataagtctttgactctgcacttccgttatcactttagt----ccctggcgttacaaaaatctgttaagtgatgatgtggcgcatatgagg 32665736  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaac-caaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    ||||| | |||||||| |||||||||||||| |||||||||||| || ||| |||||| ||||||  ||||||||||||||        |||||| ||||    
T  32665735 tgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaattgaatatc--------aaatccctaaa 32665644  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-t 297  Q
    ||| |||||| |||||||||||||||| ||| ||||||||||||| ||||||| ||| |||| |||| ||||||||| || |||||||  || ||||| |    
T  32665643 tcttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttctattcaacaccaacctactgttaggtccctgactgcacacacttact 32665544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9339708 - 9339943
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    |||||||||||||| || | |||| || ||||||||||||||||||||    ||||||||||       ||| |||||||||||| ||||||||||| |     
T  9339708 ttaaatacaaataaatccccgactctgcacttccgttatcactttagt----ccctgacgttaaaaaaatctgttaagtgatgatgtggcgcatatgaga 9339803  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||  |||||||||||||||||| |||||||| |         
T  9339804 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatctt----- 9339898  T
Q  201 ctcaaatccctaaatgtcatctaat---tctctcttttgttcaaaatt 245  Q
       |||||| |||||||||||||||   | ||||||||||||||||||    
T  9339899 ---aaatccttaaatgtcatctaattaatatctcttttgttcaaaatt 9339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 309
Target Start/End: Complemental strand, 34088415 - 34088214
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    ||||||||||||| ||| ||||||||||||  ||||||||||||| || ||| ||||  ||||||  ||||||||||| |||||| ||||||||          
T  34088415 gtgtcatagggactaaagtgaaagtagaaatgtgtcactttggtccctgaacaaaaattcaatatccccaaattgaatttcaaatccctaaatc------ 34088322  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-t 297  Q
      |||||||  ||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||   |||||||||||||||||| |    
T  34088321 --tcaaatcattaaatgttatctaattctctcttttgttcaaaattaatcttccactaaacattaacttactgttag--atctgactgtgcatacttact 34088226  T
Q  298 atcagttaggtc 309  Q
    ||||||||||||    
T  34088225 atcagttaggtc 34088214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 309
Target Start/End: Original strand, 51450169 - 51450388
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| |||||| ||| ||||||||||||||  ||||| | |||  | |||||||||  |||||  |||| |||||| ||||||  | |||    
T  51450169 catatgaggtgtcacagggactaaactgaaagtagaaaatgatcactatagtccatgaaccaaaaataaatatccccaacttgaatctcaaatctcaaaa 51450268  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgca 290  Q
    |   |||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||| | ||||||    
T  51450269 tttctaaatctcaaatccgtaagtgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaacttactattaggtctcttagtgtgca 51450368  T
Q  291 tactta-tatcagttaggtc 309  Q
    |||||| |||||||||||||    
T  51450369 tacttactatcagttaggtc 51450388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 7944286 - 7944470
Alignment:
Q  74 ttaagtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaatt 173  Q
    ||||||||| |||||||||||||| ||||||| |  ||||||| ||||||||||||||| ||||||||||| ||  |||||||| ||||||  |||||||    
T  7944286 ttaagtgataatatggcgcatatgaggtgtcacatagaccaaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaatt 7944385  T
Q  174 gaatatcaaattcctaaatccttaaat-ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 262  Q
    ||||||||||| ||||||| ||||||| || |||| |    ||||||||||||| ||| |||| |||||||| |||||||||||||||||    
T  7944386 gaatatcaaatccctaaat-cttaaatccttaaatgc----atgtcatctaattatcttttttattcaaaatcaatcttccattaaacac 7944470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 26518284 - 26518407
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgt 217  Q
    |||| ||||||||| ||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||  ||   |  ||||||||||| |    
T  26518284 tgaaggtagaaaatggtcactttggtctctgaaccgaaaaccaatatctccaaattgaatctcaaattcctaaatcccgaa---tttaatccctaaatct 26518380  T
Q  218 catctaattctctcttttgttcaaaat 244  Q
    |||||||||| ||||||||||||||||    
T  26518381 catctaattccctcttttgttcaaaat 26518407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 22857533 - 22857372
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| | |||| ||| |||||||||||| | |||||||||    || ||||||||| ||||||  ||||||||||| |||||| | ||||    
T  22857533 catatgaggtgtcacatggactaaagtgaaagtagaaactagtcactttgaaaactgaaccaaaaatcaatatacccaaattgaatctcaaatccttaaa 22857434  T
Q  192 tccttaaa-tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttc 252  Q
    ||| |||| |||||||||||||||| |||||||||| ||  ||||||||||||| |||||||    
T  22857433 tccctaaaatctcaaatccctaaatatcatctaattttcctttttgttcaaaatcaatcttc 22857372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 309
Target Start/End: Complemental strand, 6613939 - 6613737
Alignment:
Q  94 tatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||||||| ||| |||||| ||| ||||||||| ||||| | |||||| || || ||||||||| ||||||  ||||||||||| |||||| ||||||||    
T  6613939 tatggggtttcacagggactaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaatc 6613840  T
Q  194 cttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcata 292  Q
    |||               ||||||||| |||||||||||||||| |||||| ||| ||| |||||||| ||||||||| |||  || |||| | ||||||    
T  6613839 ctt---------------aaatgtcatataattctctcttttgtacaaaatcaattttctattaaacatcaacttactattaagtccctgattatgcata 6613755  T
Q  293 ctta-tatcagttaggtc 309  Q
    |||| |||||||||||||    
T  6613754 cttattatcagttaggtc 6613737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 25038133 - 25038240
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta- 296  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||| |  |||||||||||||   ||||||| |||||| || || ||||||||||||||     
T  25038133 aatctcaaatccctaaaagtcatataattctttcttttgttcaagaacaatcttccattaacaccaacttattgttaggtcccttactgtgcatacttac 25038232  T
Q  297 tatcagtt 304  Q
    ||||||||    
T  25038233 tatcagtt 25038240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 25043345 - 25043452
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta- 296  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||| |  |||||||||||||   ||||||| |||||| || || ||||||||||||||     
T  25043345 aatctcaaatccctaaaagtcatataattctttcttttgttcaagaacaatcttccattaacaccaacttattgttaggtcccttactgtgcatacttac 25043444  T
Q  297 tatcagtt 304  Q
    ||||||||    
T  25043445 tatcagtt 25043452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 23703948 - 23704006
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 262  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  23703948 aaatctctaaatgtcatctaattatctcttttgttcaaaattaattttccattaaacac 23704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 307
Target Start/End: Original strand, 34085690 - 34085893
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    |||||||  ||| ||||||||| ||||||||||||||||||  |||||||| |   | ||||||||| ||||||  ||||||||||| ||||||||||||    
T  34085690 gcatatgatgtgacatagggactaaaatgaaagtagaaaatgatcactttgatgcttgaaccaaaaatcaatatccccaaattgaatttcaaattcctaa 34085789  T
Q  191 atccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaac-acaacttactgttagctctctgactgtgc 289  Q
    | |                ||||||||||||||||||| ||||||||||||||| |||||||| |||| | ||||||||||||||  ||  ||||| |||    
T  34085790 acca---------------ctaaatgtcatctaattctttcttttgttcaaaatcaatcttcctttaatcaacaacttactgttatatccttgactatgc 34085874  T
Q  290 atactta-tatcagttagg 307  Q
    ||| ||| |||||||||||    
T  34085875 atatttactatcagttagg 34085893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 22856945 - 22857001
Alignment:
Q  205 aatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca 261  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  22856945 aatccctgaatgtcatctaattctctcttttgttaaaaatcaatctttcattaaaca 22857001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10333247 - 10333200
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  10333247 ttaaatacaaataagtctctgactctgcacttccgttatcactttagt 10333200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 25038050 - 25038149
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| | | || ||| ||||||||||||||| ||||||||||| || ||||||||| ||||||  | ||||||||| |||||| ||||||    
T  25038050 catatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 25043262 - 25043361
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| | | || ||| ||||||||||||||| ||||||||||| || ||||||||| ||||||  | ||||||||| |||||| ||||||    
T  25043262 catatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaaa 25043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 5782551 - 5782665
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| | |||| ||| ||||| || ||||||||||||||  || || ||||||||| ||||||  ||||  | ||| ||| |||||||||||||||||    
T  5782551 gtgtcacatggactaaagtgaaactaaaaaattgtcactttaatccctaaaccaaaaatcaatatccccaatatcaatctcacattcctaaatccttaaa 5782650  T
Q  200 tctcaaatccctaaa 214  Q
    || ||||||||||||    
T  5782651 tcacaaatccctaaa 5782665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 51453617 - 51453552
Alignment:
Q  168 caaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctctt 233  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||| || | ||||| ||||||    
T  51453617 caaattgaatttcaaatccctaaatccttaaatctcaaatccttaaatatcgtataattatctctt 51453552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6614040 - 6613993
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| || ||||| ||||||| ||||||    
T  6614040 ttaaatacaaataagtctctgactctgcacttcagttatcattttagt 6613993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 8975337 - 8975400
Alignment:
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    ||||| |||||| ||| |||||||||||||| |||||||||||| |  ||||||||| ||||||    
T  8975337 tgtcacagggactaaagtgaaagtagaaaatggtcactttggtcccgaaaccaaaaatcaatat 8975400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22856742 - 22856789
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| |||||||| ||| || ||||||||||||||||||||    
T  22856742 ttaaatacaaagaagtctctaactctgcacttccgttatcactttagt 22856789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 29766094 - 29766164
Alignment:
Q  94 tatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    |||| ||||||||||  || ||| ||||| ||||||||||||||||||||| || ||| ||||| ||||||    
T  29766094 tatgaggtgtcatagttactaaagtgaaaatagaaaattgtcactttggtccctgaacaaaaaatcaatat 29766164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 3117818 - 3117918
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| |  ||| ||| ||||||||||||||  ||| ||| |||  | |||||||||  |||||  |||||||||||||||||| ||||||    
T  3117818 catatgaggtgtcacaatgactaaagtgaaagtagaaaatgatcattttagtccttgaaccaaaaattaatatccccaaattgaatatcaaatccctaaa 3117917  T
Q  192 t 192  Q
    |    
T  3117918 t 3117918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 11830174 - 11830214
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||||||||||| |||||||||| |||||| ||||||||||    
T  11830174 aaatccctaaatctcatctaattatctcttctgttcaaaat 11830214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 16249821 - 16249913
Alignment:
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||||||||| | ||| |||||||||||||| |||| ||| ||| || |||| |||| ||||||  | ||||||||| | |||| ||||||||    
T  16249821 tgtcataggggctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaaatc 16249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 17588802 - 17588842
Alignment:
Q  204 aaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  17588802 aaatccctaaatctcatttaatcctctcttttgttcaaaat 17588842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25037940 - 25037988
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    ||||||||||| ||||| |||||| || |||| ||||||||||||||||    
T  25037940 ttaaatacaaagaagtcactgactctggacttacgttatcactttagtt 25037988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25043152 - 25043200
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagtt 49  Q
    ||||||||||| ||||| |||||| || |||| ||||||||||||||||    
T  25043152 ttaaatacaaagaagtcactgactctggacttacgttatcactttagtt 25043200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 6e-87; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 47878545 - 47878186
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||||| |  ||||||||||||||||||||    || |||||||       ||| ||||| |||||| ||||||||||| ||    
T  47878545 ttaaatacaaataagtccctgactctacacttccgttatcactttagt----ccatgacgttaataaaatctgttaagcgatgatgtggcgcatatgagg 47878450  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    |||||||||||||||| |||||||||||||| |||||||||||| || ||||||||| ||||||| | |||||||||||||||||||||||| |||||||    
T  47878449 tgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaattcttaaat 47878350  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatacttatatc 300  Q
    | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || |                 ||     
T  47878349 cacaaatccctaaatctcatctaattctctcttttgctcaaaattaatcttccattaaacacaacttactattaggtccc-----------------ata 47878267  T
Q  301 agttaggtctgtgacaatgaattagcaaatccattagcatctattactcttgattattgttatattcacatgataattcat 381  Q
    |||||| ||   ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  47878266 agttagttcccagacaatgaattagcaaatctattggcatttattactcttgattattgttatattcacatgataattcat 47878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 78 - 327
Target Start/End: Original strand, 54574560 - 54574810
Alignment:
Q  78 gtgatgatatggcgcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaat 177  Q
    ||||||||||| |||||||| |||||||  |||||| || ||||||||||||||  |||||||| || |  ||||||||| ||| |||  ||||||||||    
T  54574560 gtgatgatatgacgcatatgaggtgtcacggggaccgaagtgaaagtagaaaatgatcactttgatccccgaaccaaaaatcaaaattctcaaattgaat 54574659  T
Q  178 atcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagct 277  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  54574660 atcaaattcctaactccttaaatctcaaatccctaaatgtcatctaattctctctttagttcaaaattaatcttccattaaacacaacttactgttaggt 54574759  T
Q  278 ctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagca 327  Q
    | || |||||||||||||| |||||||||||||  | ||||||||||||||    
T  54574760 ccctaactgtgcatacttactatcagttaggtccctaacaatgaattagca 54574810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 42278910 - 42278727
Alignment:
Q  159 caatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaa 258  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42278910 caatattcccaaattgaatatcaaatttctaaatccttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatcttccattaa 42278811  T
Q  259 acacaacttactgttagctctctgactgtgcatactta-tatcagttaggtctgtgacaatgaattagcaaatccattagcatc 341  Q
    |||| |||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||    
T  42278810 acacgacttactgttaggtctctggctgtgcatacttactatcagttaggtctctgacaatgaattagcaaatctattagcatc 42278727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 42278111 - 42278408
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||  |||||| || |||||||||||||||||| |    ||||||||||       ||| |||||||||||| ||| ||||||| ||    
T  42278111 ttaaatacaaataagttcctgactctgcacttccgttatcactttaat----ccctgacgttaaaaaaatctgttaagtgatgatgtggtgcatatgagg 42278206  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| ||||| |||||||| |||||||||||| || ||||||||| ||||||  ||||||||||||||        |||||| |||||    
T  42278207 tgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatc--------aaatccctaaat 42278298  T
Q  201 ctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-ta 298  Q
    || |||||| ||| |||||||||| | ||| ||||||||||||| |||||||||||||||| |||| ||||||||| || ||||||  ||||| ||| ||    
T  42278299 cttaaatccttaactgtcatctaa-tatcttttttgttcaaaataaatcttccattaaacaccaacctactgttaggtccctgactaagcatatttacta 42278397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 310
Target Start/End: Complemental strand, 20599860 - 20599646
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||||||| |||||| |||||||||||| ||||| |||||||||||| || |||||||||  |||||| ||||||||||| |||||||||||||    
T  20599860 catatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtccctgaaccaaaaattaatattcccaaattgaatctcaaattcctaaa 20599761  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgt--tagctctctgactgtg 288  Q
    ||         |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||| || || ||||||    
T  20599760 tcg--------caaatctctaaatgtcatctaattctctcttttgttcaaaatcaatcttccattaaacaccaacttactgttataggtccctaactgtg 20599669  T
Q  289 catactta-tatcagttaggtct 310  Q
    |||||||| |||||||| |||||    
T  20599668 catacttattatcagttgggtct 20599646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 297
Target Start/End: Complemental strand, 4703171 - 4702967
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| | ||||||| |||| ||| |||||||| |||||||||||||||||| || | ||||||| ||||||  ||||||||||| ||||||  || ||    
T  4703171 catatgagatgtcatatggactaaagtgaaagtataaaattgtcactttggtccctgacccaaaaatcaatatccccaaattgaatctcaaatctctgaa 4703072  T
Q  192 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgca 290  Q
    ||  ||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||| |    
T  4703071 tcactaaatctcaaatccctaaatgtcatttaat--tctcttttgttcaaaatcaatcttccattaaacatcaacttactgttatatccctgactgtgta 4702974  T
Q  291 tacttat 297  Q
    |||||||    
T  4702973 tacttat 4702967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 47874626 - 47874923
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||||||||||||| |||| | || ||||||||||||||||||||     ||||| |||       | | |||| ||||||  |||||||||||  |    
T  47874626 ttaaatacaaataagtccctgattctgcacttccgttatcactttagt-----cctgatgttaaaaaaatatgttaaatgatgaggtggcgcatatgatg 47874720  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaat 200  Q
    ||||| |||||||||| |||||||| ||||| ||||||||||||  | ||||||||| ||||||  | |||||||||||||||| |||||||| |         
T  47874721 tgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatcccaaaattgaatatcaaatccctaaatctt----- 47874815  T
Q  201 ctcaaatccctaaatgtcatctaattctctctttt-gttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtgcatactta-ta 298  Q
       |||||| |||||||||| ||||| ||| |||| ||||||||| |||||||||||||||||||| ||||||||| || |||||||  |||||||| ||    
T  47874816 ---aaatccttaaatgtcatataattatctttttttgttcaaaatcaatcttccattaaacacaacctactgttaggtccctgactgaacatacttacta 47874912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 4701940 - 4702116
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaa 199  Q
    |||||| | |||| ||| |||||||||||||| |||||||||||| || || |||||  ||||||    ||||||||| ||||||  |||||||| || |    
T  4701940 gtgtcacatggactaaagtgaaagtagaaaatagtcactttggtccctgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaaatccctaga 4702039  T
Q  200 tctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacaca-acttactgttag 275  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  4702040 tctcaaatccctacatgtcatttaattctctattttgttcaaaaacaatcttccattaaacacacacttactgttag 4702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 6039377 - 6039475
Alignment:
Q  199 atctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| | ||||||| ||||    
T  6039377 atctcaaatccctaaatgtcatataattctctcttttgttcaaaatcaatcttccattaaacatcaacttactgttaggtctctaattgtgcatgctta 6039475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 19051232 - 19051106
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacacaacttactgttagctctctgactgtg 288  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||   ||||||| |||||| || |||||||||    
T  19051232 aaatccctaaatctcaaatctctaaatgtcatctagttcgctcttttgttcaaaatcaatcttccattaa--tcaacttattgttaggtccctgactgtg 19051135  T
Q  289 catactta-tatcagttaggtctgtgaca 316  Q
    |||| ||| |||||||||||||| |||||    
T  19051134 catatttactatcagttaggtctctgaca 19051106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50694811 - 50694946
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagttagtccctgacgttnnnnnnntctattaagtgatgatatggcgcatatgggg 100  Q
    ||||||| |||||||| ||||| | || |||||||||||| |||||||    ||||||||||       ||| |||||||||||| || |||||||| ||    
T  50694811 ttaaatataaataagtttctgattctgcacttccgttatctctttagt----ccctgacgttaaaaaattctgttaagtgatgatgtgtcgcatatgagg 50694906  T
Q  101 tgtcatagggaccaaaatgaaagtagaaaattgtcacttt 140  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  50694907 tgtcacagggatcaaaatgaaagtagaaaattgtcacttt 50694946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 19050488 - 19050563
Alignment:
Q  198 aatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgt 272  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  19050488 aatctcaaatccctaaatgccatctaaatctcttttttgttcaaaatcaattttccattaaacaccaacttactgt 19050563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26173003 - 26172956
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  26173003 ttaaatacaaataagtctctgactctgcacttccgttatcactttagt 26172956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 53771018 - 53770944
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    ||||||||||||||||||||||| |||||  ||||||||| ||||||  |||| |||||| |||||| |||||||    
T  53771018 tgaaagtagaaaattgtcactttagtctccgaaccaaaaatcaatatccccaacttgaatctcaaatccctaaat 53770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 53770470 - 53770562
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaat 192  Q
    |||||| || ||| ||||||||| |||||||| |||||||| ||| || || || ||| ||||||  |||| ||||||||||||| |||||||    
T  53770470 gtgtcacagagactaaaatgaaaatagaaaatggtcactttagtcactaaagcagaaatcaatatccccaacttgaatatcaaatccctaaat 53770562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19050300 - 19050347
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  19050300 ttaaatacaaagaagtctcggactctgcacttccgttatcactttagt 19050347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 42391743 - 42391688
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat 244  Q
    |||||| |||||||||||||| ||||| |||| | |||| ||||||||||||||||    
T  42391743 aaatccctaaatctcaaatccgtaaatctcatatgattcactcttttgttcaaaat 42391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 19050404 - 19050505
Alignment:
Q  91 gcatatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaa 190  Q
    ||||||| ||||||| | |||| ||| |||||||| |||||  |||||||||||  | || |||||| ||||||  | ||||||||| |||||| |||||    
T  19050404 gcatatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaa 19050503  T
Q  191 at 192  Q
    ||    
T  19050504 at 19050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 21622192 - 21622233
Alignment:
Q  270 tgttagctctctgactgtgcatactta-tatcagttaggtct 310  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  21622192 tgttaggtctctgactgtgcatacttactatcagttaggtct 21622233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 26685410 - 26685345
Alignment:
Q  100 gtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatt 165  Q
    |||||| |||||| |||||||||||||||||| |||| |||  || || ||||||||| |||||||    
T  26685410 gtgtcacagggactaaaatgaaagtagaaaatagtcagtttaatccctgaaccaaaaatcaatatt 26685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 2786420 - 2786464
Alignment:
Q  120 aaagtagaaaattgtcactttggtctcttaaccaaaaaccaatat 164  Q
    |||||||||||| ||||||||||||||| |||| |||| ||||||    
T  2786420 aaagtagaaaatggtcactttggtctctgaaccgaaaatcaatat 2786464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 21623069 - 21623001
Alignment:
Q  94 tatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaat 162  Q
    |||| ||||||| || ||| |||||||||||||||||| ||||||||| ||| | |||| |||| ||||    
T  21623069 tatgaggtgtcacagagactaaaatgaaagtagaaaatggtcactttgctctatgaaccgaaaatcaat 21623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 39870628 - 39870536
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaat 184  Q
    |||||| ||||||| | |||  ||| ||| ||||||||| ||||||||| ||| |  ||||||||| ||| || |||||||||||| ||||||    
T  39870628 catatgaggtgtcacaaggaataaagtgagagtagaaaaatgtcactttcgtccccgaaccaaaaatcaaaatctccaaattgaatttcaaat 39870536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 42391853 - 42391757
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatcct 195  Q
    ||||||| | |||| ||| |||||||||||||| |||||||| ||| || ||| |||||   |||| | |||||||| | |||||| ||||||||||    
T  42391853 ggtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaactaaaaattcatatcttcaaattgagtctcaaatccctaaatcct 42391757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 118 - 316
Target Start/End: Complemental strand, 6181 - 5985
Alignment:
Q  118 tgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgt 217  Q
    |||||||| ||||| |||||||||||| || ||||||||| ||||||  ||||||  ||| |||||||||||||||| ||||||||||||||||||||||    
T  6181 tgaaagtaaaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaatataatctcaaattcctaaatccctaaatctcaaatccctaaatgt 6082  T
Q  218 catctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta-tatcagttaggtctgtgac 315  Q
    ||| ||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||| ||     ||||||||||||| |||||||||||||| ||||    
T  6081 catataattatctcttttgttcaaaatcaatcttcaattaaacaccaacttactgttaggtc----cctgtgcatacttactatcagttaggtctctgac 5986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 5870 - 5956
Alignment:
Q  211 taaatgtcatctaattctctcttttgttcaaaattaatcttccattaaaca-caacttactgttagctctctgactgtgcatactta 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |  ||||||  ||| ||||||||||||||| ||||    
T  5870 taaatgtcatctaattctctcttttgttcaaaatcaatcttccattaaacaccgtcttactcataggtctctgactgtgcatgctta 5956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 120 - 296
Target Start/End: Complemental strand, 31239913 - 31239736
Alignment:
Q  120 aaagtagaaaattgtcactttggtctctt-aaccaaaaaccaatatttccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaatgtc 218  Q
    |||||||||||| |||||||| || |||| ||||||||| ||||||  ||||||||||| |||||| | ||||||| |||||||||||||| ||||| ||    
T  31239913 aaagtagaaaatggtcacttttgt-tcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaatatc 31239815  T
Q  219 atctaattctctcttttgttcaaaattaatcttccattaaac-acaacttactgttagctctctgactgtgcatactta 296  Q
     ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  31239814 gtctaattctctcttttgttcaaaattaatttttcattaaacaacaacttactgttagatctgtgactgtgcatactta 31239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 29845764 - 29845838
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    |||||| |||||| |||||| |||||| |||| ||||| |||||||||||||||||  ||| |||||||||||||    
T  29845764 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 29845838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 29857029 - 29857103
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    |||||| |||||| |||||| |||||| |||| ||||| |||||||||||||||||  ||| |||||||||||||    
T  29857029 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 29857103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 12676438 - 12676344
Alignment:
Q  99 ggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaatc 193  Q
    |||||||||||||  ||| | ||| ||||||||||||||||| ||| || |||| ||||  |||||   |||||||||| |||||| ||||||||    
T  12676438 ggtgtcatagggattaaagttaaattagaaaattgtcactttagtccctaaaccgaaaattaatatacacaaattgaatctcaaatccctaaatc 12676344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 79242 - 79368
Alignment:
Q  92 catatggggtgtcatagggaccaaaatgaaagtagaaaattgtcactttggtctcttaaccaaaaaccaatatttccaaattgaatatcaaattcctaaa 191  Q
    |||||| ||| ||| |||||| |||||||||| |||||||  ||||||||||| || ||  ||||| ||||||  | ||||||||| || ||||||||||    
T  79242 catatgaggtctcacagggactaaaatgaaagaagaaaatgatcactttggtccctgaataaaaaatcaatatgcctaaattgaatctcgaattcctaaa 79341  T
Q  192 tccttaaatctcaaatccctaaatgtc 218  Q
    |||||||||||||||| ||||||||||    
T  79342 tccttaaatctcaaatacctaaatgtc 79368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 116117 - 116164
Alignment:
Q  1 ttaaatacaaataagtctctgactttgtacttccgttatcactttagt 48  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||    
T  116117 ttaaatacaaataagtccctgactatgcacttccgttatcactttagt 116164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 1969 - 2043
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    |||||| |||||| |||||| |||||| |||| ||||| |||||||||||||||||  ||| |||||||||||||    
T  1969 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 3231 - 3305
Alignment:
Q  189 aaatccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat-taatcttccattaaacac 262  Q
    |||||| |||||| |||||| |||||| |||| ||||| |||||||||||||||||  ||| |||||||||||||    
T  3231 aaatccctaaatcacaaatctctaaatctcatttaattatctcttttgttcaaaatcaaattttccattaaacac 3305  T

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