View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11946_high_13 (Length: 239)
Name: NF11946_high_13
Description: NF11946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11946_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 45037385 - 45037162
Alignment:
| Q |
1 |
ccataacatagcaagaacaagattgtaaaccaatgggattggcttataaatatccttgaaatacatattcaagaaatcttgttcagcaaaaggagtagga |
100 |
Q |
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| T |
45037385 |
ccataacatagcaagaacaagattgtaaacaaatgggattggcttataaatatccttgaaatacatattcaagaaatcttgttcagcaaaaggagtagga |
45037286 |
T |
|
| Q |
101 |
ggagtaactttaagtgtcttcaaaagatcgtggtaagtatcaatgcttggctcaaacaggaacatgccagcattgaagtaaagtgaaggaggttgaccca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45037285 |
ggagtaactttaagtgtcttcaaaagatcgtggtaagtatcaatgcttggctcaaacaggaacatgccagcattgaagtaaagtgaaggaggttgaccca |
45037186 |
T |
|
| Q |
201 |
tttcctttggccaatgcacttttt |
224 |
Q |
| |
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|||||||||||||||| ||||||| |
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| T |
45037185 |
tttcctttggccaatgaacttttt |
45037162 |
T |
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