View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11947_low_7 (Length: 466)
Name: NF11947_low_7
Description: NF11947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11947_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 18 - 454
Target Start/End: Complemental strand, 44727624 - 44727207
Alignment:
| Q |
18 |
gaaacctcaaggaaacattagtagtttctagggattggcattttgcagttgcaaaaggaatattgcggagcatatatcccatcacctggtgatggtctat |
117 |
Q |
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| T |
44727624 |
gaaacctcaaggaaacattagtagtttctagggattggcattttgcagttgcaaaaggaatattgtggagcatatatcccatcacctggtgatggtctat |
44727525 |
T |
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| Q |
118 |
gtagtttctaggtcgggccataaaccaaaagacaacattcaaaaaagtaggataacttgagagatgaattattgaattatttcaactaaaattttaacgt |
217 |
Q |
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| T |
44727524 |
gtagtttctaggtcgggccataaaccaaaagacaacattcaaaaaag----------------atgaattattgaattatttcaactaaaatttta---t |
44727444 |
T |
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| Q |
218 |
gaagcgaaaatttatgaagatttctagttcctagcttttcaaacgaagtaaaagtttggagcaaaataaacaaattccccgacaaaaccgagttgaagcc |
317 |
Q |
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| T |
44727443 |
aattgcaaaatttatgaagatttctagttcctagcttttcaaacgaaataaaagtttggagcaaaataaacaaattccccgacaaaaccgagttgaagcc |
44727344 |
T |
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| Q |
318 |
aagccacttgaataccacataccaaacagtgcccgaaaaaccacatttagcaaacaaatgttcttctgtttcttggacatcattgcaacacactcaactc |
417 |
Q |
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| T |
44727343 |
aagccacttgaataccacataccaaacagtgcccgaaaaaccacatttagcaaacaaatgttcttctgtttcttggacatcattgcaacacacacaactc |
44727244 |
T |
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| Q |
418 |
ggaatccaactgttgccgaacacccctctcctcccta |
454 |
Q |
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| T |
44727243 |
ggaatccaactgttgccgaacacccctctcctcccta |
44727207 |
T |
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