View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11949_low_6 (Length: 252)

Name: NF11949_low_6
Description: NF11949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11949_low_6
NF11949_low_6
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-248)||(845-1092)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-248)||(17596-17843)
scaffold0125 (12-85)||(6895-6968)
[»] chr2 (56 HSPs)
chr2 (5-248)||(30211860-30212103)
chr2 (87-248)||(45528849-45529010)
chr2 (75-237)||(24674816-24674978)
chr2 (75-241)||(24709360-24709526)
chr2 (75-241)||(44379849-44380015)
chr2 (75-241)||(44386519-44386685)
chr2 (70-241)||(23086771-23086943)
chr2 (42-241)||(24833523-24833722)
chr2 (75-241)||(9609463-9609629)
chr2 (75-241)||(10868177-10868343)
chr2 (75-241)||(16924587-16924753)
chr2 (75-241)||(16981479-16981645)
chr2 (75-241)||(16998327-16998493)
chr2 (75-241)||(17063044-17063210)
chr2 (75-241)||(24261697-24261863)
chr2 (75-241)||(27370596-27370762)
chr2 (75-241)||(41609294-41609460)
chr2 (75-241)||(45676799-45676965)
chr2 (74-241)||(23138364-23138530)
chr2 (75-241)||(27217342-27217509)
chr2 (42-241)||(24878945-24879144)
chr2 (75-241)||(23188335-23188501)
chr2 (75-241)||(23599598-23599764)
chr2 (3-119)||(36734058-36734174)
chr2 (74-241)||(23550154-23550320)
chr2 (143-241)||(11358824-11358922)
chr2 (51-241)||(20832286-20832475)
chr2 (51-241)||(31829959-31830148)
chr2 (143-241)||(1063143-1063241)
chr2 (75-241)||(21145981-21146147)
chr2 (75-241)||(23061626-23061792)
chr2 (3-84)||(20005635-20005716)
chr2 (3-84)||(28344643-28344724)
chr2 (22-147)||(30800257-30800381)
chr2 (73-241)||(23265541-23265708)
chr2 (54-124)||(19647543-19647613)
chr2 (75-201)||(27385700-27385826)
chr2 (3-84)||(45536232-45536313)
chr2 (149-241)||(22757413-22757505)
chr2 (106-241)||(24653703-24653838)
chr2 (75-229)||(21326228-21326382)
chr2 (75-192)||(22325841-22325958)
chr2 (3-84)||(23801718-23801799)
chr2 (73-241)||(27366029-27366196)
chr2 (79-241)||(23293290-23293451)
chr2 (70-129)||(28350545-28350604)
chr2 (156-241)||(23276184-23276269)
chr2 (42-84)||(10743608-10743650)
chr2 (75-117)||(12830368-12830410)
chr2 (53-119)||(19802721-19802785)
chr2 (42-84)||(23968109-23968151)
chr2 (150-240)||(24944769-24944859)
chr2 (42-84)||(25142732-25142774)
chr2 (43-84)||(23613666-23613707)
chr2 (43-84)||(25085884-25085925)
chr2 (22-85)||(30800665-30800729)
[»] chr7 (62 HSPs)
chr7 (13-248)||(21661587-21661822)
chr7 (42-239)||(15203531-15203728)
chr7 (75-241)||(14332082-14332248)
chr7 (75-241)||(23517188-23517354)
chr7 (75-238)||(8707290-8707453)
chr7 (74-241)||(12254457-12254624)
chr7 (42-241)||(14347489-14347688)
chr7 (75-241)||(10870680-10870846)
chr7 (75-241)||(11237632-11237798)
chr7 (75-241)||(15161476-15161642)
chr7 (75-241)||(18552177-18552343)
chr7 (75-241)||(17735-17902)
chr7 (75-241)||(8198313-8198479)
chr7 (75-241)||(11553521-11553687)
chr7 (75-241)||(12687186-12687352)
chr7 (75-241)||(13685748-13685914)
chr7 (73-241)||(11388824-11388991)
chr7 (42-241)||(14037459-14037658)
chr7 (75-241)||(15163840-15164005)
chr7 (75-237)||(18177427-18177589)
chr7 (75-241)||(44791770-44791936)
chr7 (51-241)||(11306663-11306852)
chr7 (79-241)||(13634140-13634302)
chr7 (3-84)||(33060747-33060828)
chr7 (73-241)||(13665252-13665419)
chr7 (143-241)||(8212528-8212626)
chr7 (51-241)||(26118981-26119170)
chr7 (3-84)||(38300106-38300187)
chr7 (3-84)||(42565116-42565197)
chr7 (143-241)||(49152052-49152150)
chr7 (140-240)||(12207198-12207298)
chr7 (146-241)||(12455460-12455555)
chr7 (140-241)||(6413262-6413363)
chr7 (11-83)||(33555730-33555802)
chr7 (143-240)||(19146965-19147062)
chr7 (143-240)||(20746364-20746461)
chr7 (73-241)||(16072695-16072862)
chr7 (146-241)||(1804-1899)
chr7 (140-241)||(16950868-16950969)
chr7 (140-241)||(26288433-26288534)
chr7 (144-240)||(14264642-14264738)
chr7 (143-237)||(14129627-14129721)
chr7 (143-237)||(14433445-14433539)
chr7 (143-237)||(15340250-15340344)
chr7 (42-87)||(17000169-17000214)
chr7 (42-84)||(3288306-3288348)
chr7 (33-83)||(13314727-13314777)
chr7 (42-84)||(14179830-14179872)
chr7 (42-84)||(15118629-15118671)
chr7 (42-84)||(20251699-20251741)
chr7 (53-121)||(1493576-1493642)
chr7 (33-86)||(9256001-9256054)
chr7 (33-86)||(9314196-9314249)
chr7 (42-119)||(11085871-11085947)
chr7 (146-219)||(13021113-13021186)
chr7 (156-237)||(14286777-14286858)
chr7 (53-121)||(16928891-16928957)
chr7 (42-87)||(18073755-18073800)
chr7 (42-119)||(23556715-23556792)
chr7 (43-84)||(46385461-46385502)
chr7 (69-121)||(15114228-15114280)
chr7 (11-84)||(36300268-36300337)
[»] chr5 (61 HSPs)
chr5 (3-238)||(21404392-21404627)
chr5 (51-241)||(20468686-20468876)
chr5 (42-234)||(26739304-26739497)
chr5 (42-241)||(21343950-21344149)
chr5 (75-241)||(22333479-22333645)
chr5 (75-241)||(27669082-27669248)
chr5 (75-241)||(41770470-41770636)
chr5 (53-241)||(21662631-21662818)
chr5 (42-241)||(22344701-22344900)
chr5 (75-241)||(15000331-15000497)
chr5 (75-241)||(16356130-16356296)
chr5 (75-241)||(22134296-22134462)
chr5 (75-241)||(27518035-27518201)
chr5 (75-241)||(27609982-27610148)
chr5 (75-241)||(29476665-29476831)
chr5 (75-241)||(34566122-34566288)
chr5 (75-241)||(40708408-40708574)
chr5 (75-241)||(19769588-19769754)
chr5 (75-241)||(27685992-27686157)
chr5 (140-241)||(21564544-21564645)
chr5 (73-241)||(21984897-21985065)
chr5 (82-242)||(23470864-23471024)
chr5 (75-241)||(23573370-23573536)
chr5 (75-241)||(37292088-37292254)
chr5 (73-241)||(24736203-24736370)
chr5 (73-241)||(24737377-24737544)
chr5 (73-241)||(24750146-24750313)
chr5 (79-241)||(26681872-26682034)
chr5 (79-241)||(26953479-26953641)
chr5 (73-241)||(21625145-21625312)
chr5 (143-241)||(22502357-22502455)
chr5 (143-231)||(14887596-14887684)
chr5 (75-235)||(18775405-18775565)
chr5 (42-241)||(20573117-20573315)
chr5 (146-241)||(23080681-23080776)
chr5 (73-240)||(23442886-23443052)
chr5 (3-81)||(19227362-19227440)
chr5 (143-241)||(20341957-20342055)
chr5 (143-241)||(37546092-37546190)
chr5 (73-241)||(6403140-6403307)
chr5 (51-231)||(24799002-24799181)
chr5 (143-231)||(25847750-25847838)
chr5 (73-240)||(21496242-21496408)
chr5 (146-241)||(22380880-22380975)
chr5 (73-231)||(28895544-28895701)
chr5 (73-231)||(28924370-28924527)
chr5 (42-119)||(16221360-16221437)
chr5 (42-115)||(16222849-16222921)
chr5 (46-119)||(19923665-19923738)
chr5 (42-119)||(19926388-19926465)
chr5 (140-241)||(22236512-22236613)
chr5 (157-237)||(17269929-17270009)
chr5 (42-86)||(18745411-18745455)
chr5 (43-119)||(21556566-21556641)
chr5 (75-191)||(25422828-25422944)
chr5 (42-85)||(16224555-16224598)
chr5 (42-85)||(20197192-20197235)
chr5 (33-84)||(22112213-22112264)
chr5 (42-119)||(16641563-16641640)
chr5 (53-121)||(23669570-23669636)
chr5 (42-82)||(14025331-14025371)
[»] scaffold0730 (1 HSPs)
scaffold0730 (42-248)||(5996-6202)
[»] scaffold0058 (2 HSPs)
scaffold0058 (40-248)||(59178-59386)
scaffold0058 (140-237)||(18912-19009)
[»] chr3 (75 HSPs)
chr3 (55-248)||(15016194-15016387)
chr3 (1-78)||(6003503-6003580)
chr3 (53-241)||(15208184-15208372)
chr3 (53-241)||(15247140-15247328)
chr3 (75-241)||(320548-320714)
chr3 (75-241)||(6600062-6600228)
chr3 (75-241)||(10004915-10005081)
chr3 (75-241)||(10905525-10905691)
chr3 (75-241)||(12497563-12497729)
chr3 (75-241)||(13252005-13252171)
chr3 (75-241)||(15403159-15403325)
chr3 (75-241)||(16635088-16635254)
chr3 (75-241)||(43162412-43162578)
chr3 (75-241)||(48424762-48424928)
chr3 (42-241)||(16807575-16807774)
chr3 (75-241)||(15348894-15349060)
chr3 (75-241)||(15590041-15590207)
chr3 (75-241)||(15725582-15725748)
chr3 (75-241)||(26793048-26793214)
chr3 (42-241)||(11297172-11297372)
chr3 (75-241)||(14877148-14877314)
chr3 (75-237)||(16370729-16370890)
chr3 (75-240)||(16691475-16691640)
chr3 (73-241)||(31944796-31944963)
chr3 (42-241)||(15338551-15338750)
chr3 (79-237)||(16757238-16757396)
chr3 (75-237)||(20062707-20062869)
chr3 (73-242)||(14974178-14974347)
chr3 (73-241)||(31689261-31689428)
chr3 (74-241)||(9522033-9522200)
chr3 (74-240)||(9514058-9514224)
chr3 (75-241)||(16492830-16492996)
chr3 (75-237)||(53385671-53385833)
chr3 (3-87)||(48631644-48631728)
chr3 (146-241)||(16330297-16330392)
chr3 (75-241)||(17489165-17489331)
chr3 (3-71)||(3526825-3526893)
chr3 (146-241)||(16338698-16338793)
chr3 (75-214)||(16810689-16810828)
chr3 (75-168)||(6609775-6609868)
chr3 (164-241)||(10383380-10383457)
chr3 (140-241)||(15227039-15227140)
chr3 (3-84)||(48043115-48043195)
chr3 (73-241)||(13972758-13972925)
chr3 (73-241)||(14085997-14086164)
chr3 (77-241)||(14571176-14571339)
chr3 (146-241)||(11961672-11961767)
chr3 (13-84)||(25202478-25202549)
chr3 (33-119)||(36526476-36526562)
chr3 (73-241)||(18134984-18135151)
chr3 (42-121)||(13028766-13028845)
chr3 (87-188)||(11852890-11852991)
chr3 (140-241)||(12854496-12854596)
chr3 (11-84)||(12917031-12917104)
chr3 (73-241)||(11304411-11304578)
chr3 (14-84)||(3160355-3160426)
chr3 (143-241)||(13323290-13323388)
chr3 (143-237)||(16381569-16381663)
chr3 (42-121)||(1981639-1981719)
chr3 (42-86)||(11260158-11260202)
chr3 (73-241)||(15953606-15953773)
chr3 (42-85)||(5216192-5216235)
chr3 (42-121)||(15446490-15446569)
chr3 (42-85)||(35064364-35064407)
chr3 (42-84)||(17050271-17050313)
chr3 (43-85)||(17533231-17533273)
chr3 (43-85)||(40808558-40808600)
chr3 (42-84)||(52311922-52311964)
chr3 (42-119)||(13937957-13938034)
chr3 (53-121)||(15008991-15009057)
chr3 (172-241)||(16412931-16413000)
chr3 (54-119)||(17690369-17690434)
chr3 (53-121)||(19444958-19445024)
chr3 (23-84)||(21845262-21845323)
chr3 (42-87)||(54330171-54330216)
[»] scaffold0035 (2 HSPs)
scaffold0035 (52-241)||(38610-38800)
scaffold0035 (66-237)||(43293-43464)
[»] chr8 (67 HSPs)
chr8 (42-241)||(23948618-23948817)
chr8 (42-241)||(20396978-20397177)
chr8 (75-241)||(19900306-19900472)
chr8 (75-241)||(21250704-21250870)
chr8 (1-82)||(22707976-22708057)
chr8 (75-241)||(20018603-20018769)
chr8 (42-240)||(22121028-22121226)
chr8 (74-241)||(21167390-21167557)
chr8 (53-235)||(22433118-22433299)
chr8 (75-241)||(17674876-17675042)
chr8 (75-241)||(22046136-22046302)
chr8 (75-241)||(22179411-22179577)
chr8 (53-241)||(20387852-20388041)
chr8 (75-241)||(19112452-19112618)
chr8 (75-241)||(21922588-21922754)
chr8 (75-237)||(15440943-15441105)
chr8 (75-237)||(15533142-15533304)
chr8 (87-237)||(19485727-19485877)
chr8 (75-241)||(19977729-19977895)
chr8 (75-241)||(21394718-21394884)
chr8 (75-241)||(21789211-21789377)
chr8 (75-241)||(32599906-32600072)
chr8 (42-241)||(16408898-16409098)
chr8 (143-241)||(12304588-12304686)
chr8 (51-241)||(14564878-14565067)
chr8 (143-241)||(16265471-16265569)
chr8 (75-241)||(22031794-22031960)
chr8 (143-241)||(27347053-27347151)
chr8 (75-241)||(30313997-30314163)
chr8 (143-241)||(804529-804627)
chr8 (143-241)||(6603485-6603583)
chr8 (143-241)||(6678938-6679036)
chr8 (75-241)||(22133894-22134060)
chr8 (14-119)||(21678444-21678548)
chr8 (143-231)||(12912834-12912922)
chr8 (73-240)||(20007611-20007777)
chr8 (143-241)||(28982184-28982282)
chr8 (143-241)||(28987404-28987502)
chr8 (42-129)||(3274243-3274330)
chr8 (87-214)||(22165071-22165198)
chr8 (11-94)||(23884492-23884575)
chr8 (140-237)||(22179011-22179108)
chr8 (73-241)||(21325263-21325430)
chr8 (73-240)||(20010754-20010920)
chr8 (14-84)||(21676133-21676202)
chr8 (143-237)||(29304283-29304377)
chr8 (140-241)||(19851238-19851339)
chr8 (140-241)||(19857274-19857375)
chr8 (3-84)||(20516644-20516725)
chr8 (77-200)||(23649846-23649969)
chr8 (140-241)||(31417327-31417428)
chr8 (185-241)||(22987073-22987129)
chr8 (156-227)||(22062249-22062320)
chr8 (41-168)||(22984909-22985036)
chr8 (143-241)||(23654757-23654855)
chr8 (42-96)||(31721937-31721991)
chr8 (42-115)||(20458352-20458425)
chr8 (42-85)||(5081708-5081751)
chr8 (42-85)||(22208724-22208767)
chr8 (43-86)||(22485033-22485076)
chr8 (42-84)||(22257832-22257874)
chr8 (33-87)||(22345509-22345563)
chr8 (33-87)||(22357169-22357223)
chr8 (42-84)||(36731178-36731220)
chr8 (42-87)||(21400307-21400352)
chr8 (42-87)||(21794800-21794845)
chr8 (42-82)||(5762285-5762325)
[»] scaffold0004 (6 HSPs)
scaffold0004 (51-241)||(111724-111914)
scaffold0004 (73-241)||(203881-204048)
scaffold0004 (73-241)||(117296-117463)
scaffold0004 (73-241)||(385545-385712)
scaffold0004 (33-119)||(73435-73521)
scaffold0004 (42-119)||(319346-319422)
[»] scaffold0877 (1 HSPs)
scaffold0877 (42-241)||(673-874)
[»] scaffold0217 (1 HSPs)
scaffold0217 (11-148)||(29020-29157)
[»] scaffold1832 (1 HSPs)
scaffold1832 (53-241)||(1002-1190)
[»] chr6 (64 HSPs)
chr6 (42-241)||(19167350-19167549)
chr6 (1-84)||(3006524-3006607)
chr6 (75-241)||(2875358-2875524)
chr6 (75-241)||(24313723-24313889)
chr6 (78-241)||(16550716-16550879)
chr6 (78-241)||(16627272-16627435)
chr6 (53-231)||(23078007-23078185)
chr6 (75-241)||(29592475-29592641)
chr6 (76-241)||(25610416-25610581)
chr6 (74-238)||(27331991-27332155)
chr6 (74-238)||(27392731-27392895)
chr6 (75-241)||(1543639-1543805)
chr6 (73-240)||(1640353-1640521)
chr6 (42-241)||(28949118-28949317)
chr6 (75-237)||(16963926-16964088)
chr6 (75-241)||(17032122-17032288)
chr6 (75-241)||(27186996-27187162)
chr6 (75-241)||(27262078-27262244)
chr6 (75-237)||(28263756-28263918)
chr6 (75-237)||(28342505-28342667)
chr6 (54-241)||(22433535-22433723)
chr6 (75-241)||(12497586-12497752)
chr6 (75-201)||(19864274-19864400)
chr6 (75-241)||(21833536-21833702)
chr6 (75-241)||(25112112-25112278)
chr6 (73-241)||(8766703-8766870)
chr6 (133-241)||(24364030-24364138)
chr6 (73-240)||(17025861-17026027)
chr6 (75-241)||(16928195-16928361)
chr6 (75-241)||(18408498-18408664)
chr6 (4-85)||(18459588-18459669)
chr6 (73-241)||(21471160-21471327)
chr6 (140-231)||(18794315-18794406)
chr6 (87-241)||(12511149-12511303)
chr6 (3-119)||(1816849-1816965)
chr6 (73-240)||(18787447-18787613)
chr6 (75-182)||(18932372-18932479)
chr6 (74-241)||(22079213-22079380)
chr6 (140-241)||(21564687-21564788)
chr6 (140-237)||(28292931-28293028)
chr6 (11-84)||(31166557-31166630)
chr6 (73-241)||(11288153-11288320)
chr6 (146-241)||(10469404-10469498)
chr6 (73-240)||(25750368-25750534)
chr6 (75-241)||(14131734-14131899)
chr6 (75-241)||(18198088-18198254)
chr6 (152-241)||(5839774-5839863)
chr6 (75-240)||(22763011-22763175)
chr6 (80-241)||(25765844-25766005)
chr6 (74-168)||(20595044-20595138)
chr6 (75-168)||(1537625-1537718)
chr6 (13-78)||(1819321-1819386)
chr6 (42-119)||(21681575-21681652)
chr6 (43-119)||(23018346-23018422)
chr6 (42-85)||(21676784-21676827)
chr6 (73-241)||(19878857-19879024)
chr6 (42-86)||(23658568-23658612)
chr6 (42-130)||(25959071-25959159)
chr6 (42-85)||(19650571-19650614)
chr6 (23-85)||(10446489-10446551)
chr6 (62-124)||(18659814-18659876)
chr6 (42-84)||(20408758-20408800)
chr6 (43-84)||(15890131-15890172)
chr6 (69-121)||(19566252-19566304)
[»] scaffold0411 (1 HSPs)
scaffold0411 (42-241)||(15492-15691)
[»] scaffold0037 (1 HSPs)
scaffold0037 (42-241)||(117318-117517)
[»] scaffold0100 (1 HSPs)
scaffold0100 (42-241)||(26132-26331)
[»] scaffold0005 (4 HSPs)
scaffold0005 (42-241)||(165122-165321)
scaffold0005 (75-241)||(308386-308552)
scaffold0005 (155-241)||(279243-279329)
scaffold0005 (143-237)||(260103-260197)
[»] chr4 (57 HSPs)
chr4 (42-241)||(14651971-14652170)
chr4 (75-241)||(8386108-8386274)
chr4 (75-241)||(14304127-14304293)
chr4 (75-241)||(23955443-23955609)
chr4 (75-241)||(27711032-27711198)
chr4 (75-241)||(8053773-8053939)
chr4 (75-241)||(15364082-15364248)
chr4 (75-241)||(18296901-18297067)
chr4 (75-241)||(19778943-19779109)
chr4 (75-241)||(29039554-29039720)
chr4 (75-241)||(40472736-40472902)
chr4 (53-241)||(14851516-14851704)
chr4 (52-240)||(15415390-15415576)
chr4 (74-241)||(14927409-14927576)
chr4 (75-241)||(12476296-12476462)
chr4 (75-241)||(12523372-12523538)
chr4 (75-241)||(14267049-14267215)
chr4 (1-77)||(14353455-14353532)
chr4 (75-241)||(14680263-14680429)
chr4 (75-241)||(16355595-16355761)
chr4 (143-241)||(3265207-3265305)
chr4 (143-241)||(20890747-20890845)
chr4 (143-241)||(29453950-29454048)
chr4 (75-240)||(7090159-7090324)
chr4 (75-241)||(18227596-18227762)
chr4 (146-231)||(11207654-11207739)
chr4 (73-241)||(15003774-15003941)
chr4 (73-241)||(15319279-15319445)
chr4 (142-241)||(18164545-18164644)
chr4 (146-241)||(33222685-33222780)
chr4 (91-241)||(18607980-18608130)
chr4 (143-241)||(44662276-44662374)
chr4 (140-241)||(15352036-15352137)
chr4 (156-231)||(1649697-1649772)
chr4 (74-241)||(14159188-14159354)
chr4 (11-84)||(9622813-9622886)
chr4 (14-84)||(15782708-15782779)
chr4 (32-85)||(14477941-14477994)
chr4 (140-241)||(15326305-15326406)
chr4 (140-241)||(15359467-15359568)
chr4 (14-84)||(18463317-18463388)
chr4 (53-129)||(13879132-13879207)
chr4 (42-84)||(10706088-10706130)
chr4 (42-84)||(10919858-10919900)
chr4 (42-84)||(11426136-11426178)
chr4 (43-85)||(12623756-12623798)
chr4 (42-84)||(16616001-16616043)
chr4 (42-84)||(19565408-19565450)
chr4 (42-84)||(26920979-26921021)
chr4 (42-84)||(30139750-30139792)
chr4 (42-84)||(46741721-46741763)
chr4 (42-84)||(50161875-50161917)
chr4 (42-84)||(53629674-53629716)
chr4 (43-84)||(40238988-40239029)
chr4 (42-82)||(9639588-9639628)
chr4 (133-241)||(15070167-15070275)
chr4 (42-86)||(26446757-26446801)
[»] scaffold0379 (4 HSPs)
scaffold0379 (73-241)||(13390-13558)
scaffold0379 (24-119)||(8448-8543)
scaffold0379 (24-119)||(15640-15735)
scaffold0379 (42-85)||(11350-11393)
[»] scaffold0234 (1 HSPs)
scaffold0234 (73-241)||(25484-25651)
[»] chr1 (44 HSPs)
chr1 (75-241)||(16351081-16351247)
chr1 (75-241)||(20136489-20136655)
chr1 (1-85)||(20707708-20707792)
chr1 (42-241)||(19761348-19761545)
chr1 (42-241)||(50612898-50613096)
chr1 (42-241)||(50620726-50620924)
chr1 (75-241)||(19106078-19106244)
chr1 (75-241)||(33391511-33391677)
chr1 (75-237)||(41354955-41355117)
chr1 (75-241)||(51333975-51334141)
chr1 (78-241)||(21836664-21836827)
chr1 (75-241)||(21830014-21830180)
chr1 (75-241)||(21162991-21163157)
chr1 (74-241)||(20249560-20249727)
chr1 (74-241)||(21747245-21747412)
chr1 (75-241)||(16079115-16079281)
chr1 (143-241)||(20294191-20294289)
chr1 (143-241)||(31550663-31550761)
chr1 (143-241)||(37676855-37676953)
chr1 (73-241)||(19665358-19665525)
chr1 (143-234)||(20075551-20075642)
chr1 (143-241)||(20395478-20395576)
chr1 (140-241)||(21736529-21736630)
chr1 (3-82)||(34393123-34393202)
chr1 (140-237)||(20243976-20244073)
chr1 (156-237)||(22433602-22433683)
chr1 (140-241)||(20940545-20940646)
chr1 (42-119)||(37191759-37191836)
chr1 (42-87)||(21238721-21238766)
chr1 (42-87)||(24718968-24719013)
chr1 (42-85)||(8275492-8275535)
chr1 (14-84)||(21187720-21187791)
chr1 (33-84)||(45499912-45499963)
chr1 (42-85)||(50546315-50546358)
chr1 (42-84)||(18122498-18122540)
chr1 (42-84)||(20589257-20589299)
chr1 (42-84)||(20593795-20593837)
chr1 (42-84)||(21045430-21045472)
chr1 (42-84)||(24722876-24722918)
chr1 (42-87)||(16057722-16057767)
chr1 (43-84)||(21099243-21099284)
chr1 (42-86)||(25250524-25250567)
chr1 (43-83)||(35895453-35895493)
chr1 (42-86)||(44892929-44892973)
[»] scaffold0007 (2 HSPs)
scaffold0007 (144-241)||(86917-87014)
scaffold0007 (22-119)||(18316-18415)
[»] scaffold0165 (3 HSPs)
scaffold0165 (75-241)||(26334-26500)
scaffold0165 (14-87)||(32258-32331)
scaffold0165 (143-240)||(972-1069)
[»] scaffold0020 (1 HSPs)
scaffold0020 (75-241)||(179944-180110)
[»] scaffold0962 (1 HSPs)
scaffold0962 (53-241)||(103-290)
[»] scaffold0359 (1 HSPs)
scaffold0359 (53-241)||(16692-16880)
[»] scaffold0476 (1 HSPs)
scaffold0476 (74-241)||(9069-9236)
[»] scaffold0431 (1 HSPs)
scaffold0431 (42-241)||(7071-7270)
[»] scaffold0459 (1 HSPs)
scaffold0459 (75-241)||(141-307)
[»] scaffold0220 (2 HSPs)
scaffold0220 (75-241)||(1235-1401)
scaffold0220 (42-119)||(14452-14529)
[»] scaffold0180 (1 HSPs)
scaffold0180 (75-241)||(33165-33331)
[»] scaffold0044 (2 HSPs)
scaffold0044 (75-241)||(14087-14253)
scaffold0044 (75-241)||(347-513)
[»] scaffold0031 (1 HSPs)
scaffold0031 (75-241)||(64444-64610)
[»] scaffold0028 (5 HSPs)
scaffold0028 (75-241)||(42881-43047)
scaffold0028 (75-241)||(62016-62182)
scaffold0028 (73-241)||(2540-2708)
scaffold0028 (42-241)||(8179-8378)
scaffold0028 (73-241)||(50927-51094)
[»] scaffold0048 (1 HSPs)
scaffold0048 (3-119)||(68358-68473)
[»] scaffold0138 (1 HSPs)
scaffold0138 (42-241)||(16878-17076)
[»] scaffold0012 (2 HSPs)
scaffold0012 (74-241)||(228769-228936)
scaffold0012 (74-240)||(219831-219997)
[»] scaffold0737 (1 HSPs)
scaffold0737 (75-241)||(395-561)
[»] scaffold0676 (1 HSPs)
scaffold0676 (75-241)||(5741-5907)
[»] scaffold0454 (1 HSPs)
scaffold0454 (75-241)||(6665-6831)
[»] scaffold0206 (1 HSPs)
scaffold0206 (75-241)||(30638-30804)
[»] scaffold0198 (1 HSPs)
scaffold0198 (75-241)||(27694-27860)
[»] scaffold0109 (2 HSPs)
scaffold0109 (75-241)||(33986-34152)
scaffold0109 (75-241)||(8323-8489)
[»] scaffold0042 (2 HSPs)
scaffold0042 (75-241)||(40202-40368)
scaffold0042 (75-241)||(65134-65299)
[»] scaffold0022 (1 HSPs)
scaffold0022 (53-231)||(127622-127800)
[»] scaffold0761 (1 HSPs)
scaffold0761 (104-241)||(5022-5159)
[»] scaffold0069 (1 HSPs)
scaffold0069 (73-241)||(39303-39470)
[»] scaffold0010 (3 HSPs)
scaffold0010 (53-241)||(1927-2115)
scaffold0010 (73-241)||(42746-42913)
scaffold0010 (73-241)||(47812-47979)
[»] scaffold0894 (1 HSPs)
scaffold0894 (74-241)||(865-1032)
[»] scaffold0396 (1 HSPs)
scaffold0396 (74-241)||(3758-3925)
[»] scaffold0358 (1 HSPs)
scaffold0358 (75-241)||(6000-6166)
[»] scaffold0106 (2 HSPs)
scaffold0106 (75-241)||(13766-13932)
scaffold0106 (140-241)||(31202-31303)
[»] scaffold0084 (1 HSPs)
scaffold0084 (76-242)||(4949-5115)
[»] scaffold0040 (2 HSPs)
scaffold0040 (74-241)||(14603-14770)
scaffold0040 (42-94)||(110218-110270)
[»] scaffold0546 (1 HSPs)
scaffold0546 (75-241)||(4818-4984)
[»] scaffold0001 (4 HSPs)
scaffold0001 (79-241)||(447790-447952)
scaffold0001 (74-241)||(161838-162006)
scaffold0001 (51-119)||(30750-30818)
scaffold0001 (51-119)||(36057-36125)
[»] scaffold0064 (3 HSPs)
scaffold0064 (73-241)||(29182-29351)
scaffold0064 (73-241)||(41173-41342)
scaffold0064 (75-168)||(63385-63478)
[»] scaffold0282 (1 HSPs)
scaffold0282 (53-241)||(16829-17017)
[»] scaffold1102 (1 HSPs)
scaffold1102 (3-86)||(1613-1696)
[»] scaffold0089 (1 HSPs)
scaffold0089 (143-241)||(17126-17224)
[»] scaffold0023 (2 HSPs)
scaffold0023 (75-241)||(37159-37325)
scaffold0023 (140-237)||(19155-19252)
[»] scaffold1355 (1 HSPs)
scaffold1355 (77-238)||(405-566)
[»] scaffold0249 (1 HSPs)
scaffold0249 (73-241)||(5415-5582)
[»] scaffold0052 (1 HSPs)
scaffold0052 (75-219)||(11644-11788)
[»] scaffold0034 (2 HSPs)
scaffold0034 (73-241)||(5331-5498)
scaffold0034 (73-240)||(14320-14486)
[»] scaffold0924 (1 HSPs)
scaffold0924 (73-240)||(3617-3783)
[»] scaffold0556 (1 HSPs)
scaffold0556 (74-241)||(3640-3806)
[»] scaffold0333 (1 HSPs)
scaffold0333 (74-241)||(15219-15386)
[»] scaffold0320 (1 HSPs)
scaffold0320 (146-241)||(2390-2485)
[»] scaffold0120 (1 HSPs)
scaffold0120 (75-226)||(10658-10809)
[»] scaffold0009 (1 HSPs)
scaffold0009 (146-241)||(248411-248506)
[»] scaffold0413 (1 HSPs)
scaffold0413 (75-241)||(732-898)
[»] scaffold0324 (1 HSPs)
scaffold0324 (75-241)||(16684-16850)
[»] scaffold0161 (1 HSPs)
scaffold0161 (79-241)||(1106-1268)
[»] scaffold0060 (1 HSPs)
scaffold0060 (143-241)||(42578-42676)
[»] scaffold0056 (1 HSPs)
scaffold0056 (75-201)||(12764-12890)
[»] scaffold0395 (1 HSPs)
scaffold0395 (73-241)||(6312-6480)
[»] scaffold0114 (4 HSPs)
scaffold0114 (140-241)||(32141-32242)
scaffold0114 (140-237)||(35847-35944)
scaffold0114 (156-237)||(43313-43394)
scaffold0114 (142-237)||(19916-20011)
[»] scaffold1032 (1 HSPs)
scaffold1032 (73-241)||(2278-2445)
[»] scaffold0947 (1 HSPs)
scaffold0947 (73-241)||(2844-3011)
[»] scaffold0298 (1 HSPs)
scaffold0298 (73-241)||(19709-19876)
[»] scaffold0235 (1 HSPs)
scaffold0235 (73-241)||(22089-22256)
[»] scaffold0203 (2 HSPs)
scaffold0203 (73-241)||(14664-14831)
scaffold0203 (73-241)||(9290-9457)
[»] scaffold0126 (1 HSPs)
scaffold0126 (73-241)||(45570-45737)
[»] scaffold0124 (2 HSPs)
scaffold0124 (73-241)||(10614-10781)
scaffold0124 (80-241)||(812-972)
[»] scaffold0113 (2 HSPs)
scaffold0113 (73-241)||(26278-26445)
scaffold0113 (142-241)||(16470-16569)
[»] scaffold0019 (2 HSPs)
scaffold0019 (73-241)||(135845-136012)
scaffold0019 (42-84)||(11644-11686)
[»] scaffold0093 (2 HSPs)
scaffold0093 (146-241)||(26059-26154)
scaffold0093 (146-212)||(36727-36793)
[»] scaffold1939 (1 HSPs)
scaffold1939 (3-84)||(484-566)
[»] scaffold0507 (1 HSPs)
scaffold0507 (140-241)||(6769-6870)
[»] scaffold0403 (1 HSPs)
scaffold0403 (75-191)||(6142-6258)
[»] scaffold0244 (1 HSPs)
scaffold0244 (73-241)||(1149-1316)
[»] scaffold0076 (1 HSPs)
scaffold0076 (73-241)||(34090-34257)
[»] scaffold0074 (2 HSPs)
scaffold0074 (164-240)||(2956-3032)
scaffold0074 (74-130)||(2891-2947)
[»] scaffold0054 (1 HSPs)
scaffold0054 (73-241)||(60653-60820)
[»] scaffold0026 (3 HSPs)
scaffold0026 (140-240)||(36994-37094)
scaffold0026 (42-119)||(22537-22614)
scaffold0026 (204-241)||(26698-26735)
[»] scaffold0222 (1 HSPs)
scaffold0222 (142-241)||(3681-3780)
[»] scaffold0130 (1 HSPs)
scaffold0130 (73-240)||(11153-11319)
[»] scaffold0011 (3 HSPs)
scaffold0011 (42-168)||(36831-36958)
scaffold0011 (73-185)||(148321-148432)
scaffold0011 (73-241)||(196097-196264)
[»] scaffold0585 (1 HSPs)
scaffold0585 (140-241)||(7449-7550)
[»] scaffold0101 (2 HSPs)
scaffold0101 (75-168)||(7689-7782)
scaffold0101 (205-241)||(7629-7665)
[»] scaffold0049 (1 HSPs)
scaffold0049 (73-238)||(52279-52443)
[»] scaffold0309 (1 HSPs)
scaffold0309 (76-240)||(9527-9690)
[»] scaffold0266 (1 HSPs)
scaffold0266 (73-241)||(13812-13979)
[»] scaffold0205 (1 HSPs)
scaffold0205 (3-59)||(5311-5367)
[»] scaffold0483 (1 HSPs)
scaffold0483 (70-241)||(10496-10666)
[»] scaffold0878 (1 HSPs)
scaffold0878 (33-119)||(3202-3288)
[»] scaffold0108 (1 HSPs)
scaffold0108 (143-241)||(46922-47020)
[»] scaffold1550 (1 HSPs)
scaffold1550 (75-192)||(4-121)
[»] scaffold0216 (1 HSPs)
scaffold0216 (42-155)||(7608-7720)
[»] scaffold0207 (1 HSPs)
scaffold0207 (42-119)||(12774-12851)
[»] scaffold0156 (1 HSPs)
scaffold0156 (140-241)||(27018-27119)
[»] scaffold0104 (1 HSPs)
scaffold0104 (140-241)||(320-421)
[»] scaffold0326 (2 HSPs)
scaffold0326 (73-241)||(3768-3935)
scaffold0326 (73-241)||(18950-19117)
[»] scaffold0149 (3 HSPs)
scaffold0149 (73-241)||(13602-13769)
scaffold0149 (42-85)||(32793-32836)
scaffold0149 (79-152)||(34979-35051)
[»] scaffold0029 (3 HSPs)
scaffold0029 (75-183)||(124815-124923)
scaffold0029 (146-241)||(112357-112452)
scaffold0029 (180-241)||(117274-117335)
[»] scaffold0092 (1 HSPs)
scaffold0092 (14-84)||(38129-38200)
[»] scaffold1243 (1 HSPs)
scaffold1243 (167-229)||(268-330)
[»] scaffold0518 (1 HSPs)
scaffold0518 (140-234)||(10616-10710)
[»] scaffold0139 (2 HSPs)
scaffold0139 (38-84)||(39794-39840)
scaffold0139 (73-237)||(27245-27408)
[»] scaffold0036 (1 HSPs)
scaffold0036 (42-84)||(77600-77642)
[»] scaffold0574 (1 HSPs)
scaffold0574 (140-241)||(4552-4653)
[»] scaffold0555 (1 HSPs)
scaffold0555 (42-119)||(8245-8321)
[»] scaffold0337 (1 HSPs)
scaffold0337 (14-84)||(3500-3572)
[»] scaffold0177 (1 HSPs)
scaffold0177 (172-241)||(17748-17817)
[»] scaffold0083 (1 HSPs)
scaffold0083 (53-130)||(10364-10441)
[»] scaffold0385 (1 HSPs)
scaffold0385 (33-84)||(852-904)
[»] scaffold0039 (2 HSPs)
scaffold0039 (42-86)||(9346-9390)
scaffold0039 (157-237)||(96176-96256)
[»] scaffold1160 (1 HSPs)
scaffold1160 (42-85)||(911-954)
[»] scaffold0853 (1 HSPs)
scaffold0853 (42-85)||(283-326)
[»] scaffold0682 (1 HSPs)
scaffold0682 (158-241)||(1-84)
[»] scaffold0450 (1 HSPs)
scaffold0450 (44-119)||(2179-2254)
[»] scaffold0241 (1 HSPs)
scaffold0241 (52-119)||(3799-3865)
[»] scaffold0231 (1 HSPs)
scaffold0231 (42-85)||(16838-16881)
[»] scaffold0213 (1 HSPs)
scaffold0213 (42-85)||(19860-19903)
[»] scaffold0071 (1 HSPs)
scaffold0071 (42-121)||(15623-15702)
[»] scaffold0600 (1 HSPs)
scaffold0600 (143-237)||(1204-1298)
[»] scaffold0550 (1 HSPs)
scaffold0550 (42-84)||(5245-5287)
[»] scaffold0429 (1 HSPs)
scaffold0429 (43-121)||(1607-1685)
[»] scaffold0414 (1 HSPs)
scaffold0414 (42-84)||(10419-10461)
[»] scaffold0407 (2 HSPs)
scaffold0407 (42-84)||(4281-4323)
scaffold0407 (42-84)||(10747-10789)
[»] scaffold0063 (1 HSPs)
scaffold0063 (42-84)||(63094-63136)
[»] scaffold0021 (1 HSPs)
scaffold0021 (42-116)||(168146-168220)
[»] scaffold0577 (1 HSPs)
scaffold0577 (42-119)||(9425-9501)
[»] scaffold0447 (1 HSPs)
scaffold0447 (42-119)||(12825-12902)
[»] scaffold0383 (1 HSPs)
scaffold0383 (42-119)||(10820-10897)
[»] scaffold0323 (1 HSPs)
scaffold0323 (106-191)||(8651-8736)
[»] scaffold0116 (1 HSPs)
scaffold0116 (34-86)||(35108-35161)
[»] scaffold0609 (1 HSPs)
scaffold0609 (53-121)||(991-1058)
[»] scaffold0509 (2 HSPs)
scaffold0509 (42-86)||(2145-2189)
scaffold0509 (42-86)||(8573-8617)
[»] scaffold0328 (1 HSPs)
scaffold0328 (46-86)||(18139-18179)


Alignment Details
Target: scaffold1434 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 1092 - 845
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1092 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaacaataaattagggcgtaacaattctcccccacttag 993  T
Q  101 aatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctc 200  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  992 aatattttcgtcctcgaaaatgtacctcattcaaataactctggatacaactccagcatctttctctccaactcctacgtcaaactttcaccagccgctc 893  T
Q  201 ctccccaaacgactttcacaagaggtatctccttgcctctctgcttct 248  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  892 ctccccaaacgactttcacaagaggtatctccttgcctctcagcttct 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17843 - 17596
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17843 tcacacatcgcaattattcacataaattattccaaatgacactaaactcgataaaataactaaataataaattagggtgttacaattctcccccacttag 17744  T
Q  101 aatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctc 200  Q
    |||||||||||||| ||||||||| |||||| |||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||  |||    
T  17743 aatattttcgtccttgaaaatgtacctcattcaaataactctgaatacgactccagcatcttgctcttcaactcccacgtcaaactttcaccagcaactc 17644  T
Q  201 ctccccaaacgactttcacaagaggtatctccttgcctctctgcttct 248  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  17643 ctccccaaacgattttcacaagaggtatctccttgcctctcagcttct 17596  T

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Target: scaffold0125; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 6968 - 6895
Alignment:
Q  12 aattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6968 aattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 6895  T

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Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 30212103 - 30211860
Alignment:
Q  5 acatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaata 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||    
T  30212103 acatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaataagggtgttataactctcccccacttagaata 30212004  T
Q  105 ttttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctcc 204  Q
    |||| ||||||||||||||| |||||| |||||| ||||||||| |||||| ||||||||||||||||||  |||||||||||||||| |||||||||||    
T  30212003 tttttgtcctcgaaaatgtacctcattcaaataactctggatacaactccaacatcttgctctccaactctcacgtcaaactttcaccagccgctcctcc 30211904  T
Q  205 ccaaacgactttcacaagaggtatctccttgcctctctgcttct 248  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  30211903 ccaaacgactttcacaagaggtatctccttgcctctcagcttct 30211860  T

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Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 45528849 - 45529010
Alignment:
Q  87 tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaact 186  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||| |||||| || |||||||    
T  45528849 tctcccccacttagaatattttcgtcctcgaaaatgtacctcattcaaataactctggatacgactccagcatcttactctctaactcccacatcaaact 45528948  T
Q  187 ttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctctgcttct 248  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  45528949 ttcaccagccgctccttcccaaacgactttcacaagaggtatctccttgcctcccagcttct 45529010  T

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Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 24674816 - 24674978
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  24674816 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctc 24674915  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||||||| ||||||||||||||    
T  24674916 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtatctccttgcc 24674978  T

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Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 24709360 - 24709526
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  24709360 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 24709459  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  24709460 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 24709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 44380015 - 44379849
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||| | | |||    
T  44380015 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggataagactccagcatcttactcccaagctc 44379916  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| |||||||| | |||||||  |||||||||| |||| |||||||||||||||||||||    
T  44379915 ctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatctccttgcctctc 44379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 44386685 - 44386519
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||| | | |||    
T  44386685 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggataagactccagcatcttactcccaagctc 44386586  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| |||||||| | |||||||  |||||||||| |||| |||||||||||||||||||||    
T  44386585 ctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatctccttgcctctc 44386519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 23086771 - 23086943
Alignment:
Q  70 aattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatct-cattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    |||||||||||||||| ||||||| ||||| |  |||||||||||||||||| |  || |||  |||||| ||| |||| ||||||| ||| || |||||    
T  23086771 aattagggcgttacaactctccccaacttaaagaattttcgtcctcgaaaatattacttcatgcaaataactcttgataagactccatcattttactctc 23086870  T
Q  169 caactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| | |||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||||||    
T  23086871 cagctcccatgtcaaactttcatcagccgctcctccccaaacgacttttactagaggtatctccttgcctctc 23086943  T

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Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 24833722 - 24833523
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| |||||||||  || |||| || ||||||||||||| ||||||| ||||| |  |||||| ||||||||||||||  ||||  ||| || ||    
T  24833722 ctaaactcaataaaataatcaattaattaaatagggcgttacaactctccccaacttatagaattttcatcctcgaaaatgtacgtcatgcaaacaactc 24833623  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| || ||| ||||||||||  |||||||| |||| || ||||| || ||| ||||| |||||||||||||||||||| ||||||| |||||||||    
T  24833622 tggataagaatcctgcatcttgcttcccaactcccacgttaagctttctccagcccctccttcccaaacgactttcacaagaagtatctctttgcctctc 24833523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 9609463 - 9609629
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  9609463 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 9609562  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  9609563 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 9609629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 10868177 - 10868343
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  10868177 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 10868276  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||| | |||| |||||||||||||||||||||    
T  10868277 ccacgtcaagctttcaccagtcgctcccgaccaaacgattctcacgagaggtatctccttgcctctc 10868343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16924587 - 16924753
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16924587 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16924686  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16924687 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16924753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16981479 - 16981645
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16981479 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16981578  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16981579 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16981645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16998327 - 16998493
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16998327 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16998426  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16998427 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16998493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 17063044 - 17063210
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  17063044 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 17063143  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  17063144 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 17063210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 24261697 - 24261863
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||    || || |||||||| |||||||||||||| ||||| | |||    
T  24261697 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctc 24261796  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  24261797 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 24261863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27370596 - 27370762
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27370596 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 27370695  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||| ||||    
T  27370696 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcttctc 27370762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 41609460 - 41609294
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||||||||  ||||||||||||| ||||| | |||    
T  41609460 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataaaactccagcatcttactctcaagctc 41609361  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  41609360 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 41609294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 45676965 - 45676799
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||||||| || ||||||| ||||| || |||||| ||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  45676965 gggcgttataactctccccaacttataagattttcatcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctc 45676866  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||||||    
T  45676865 ccacgtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcctctc 45676799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 23138364 - 23138530
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||| | || |||||||||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  23138364 agggcgttacaactctccccaact-ataagattttcgtcctcgaaaatttacctcatgcaaacaactctggatatgattccagcatcttactctctagct 23138462  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  23138463 cccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctcattgcctctc 23138530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27217342 - 27217509
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| | | ||||   ||| || |||||||| |||||||||||||| ||||| | ||    
T  27217342 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaattttacctcaagcaaacaactctggataagactccagcatcttactctcaagct 27217441  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27217442 cccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 27217509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 24879144 - 24878945
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  24879144 ctaaactcgattaaataaacaattaacaaaagtgggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 24879045  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| ||||||| ||| || ||||| | |||| ||||||| |||||||| | |||||||  |||||||||| |||| ||| |||||||||||||||||    
T  24879044 tagataagactccaacattttactctcaagctcccacgtcaagctttcaccagtcgctcctgtccaaacgactctcacgagatgtatctccttgcctctc 24878945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 23188335 - 23188501
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  23188335 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 23188434  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| |   ||||  ||||||||||| | ||||| ||||||||||||||||||    
T  23188435 ccacgtcaagctttcaccagttactccagcccaaacgactctaacaaggggtatctccttgcctctc 23188501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 23599598 - 23599764
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  23599598 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 23599697  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| |   ||||  ||||||||||| | ||||| ||||||||||||||||||    
T  23599698 ccacgtcaagctttcaccagttactccagcccaaacgactctaacaaggggtatctccttgcctctc 23599764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 36734174 - 36734058
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaa 102  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||| |||  ||| |||| ||    
T  36734174 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagggtgttacaactctatcccccttaaaa 36734075  T
Q  103 tattttcgtcctcgaaa 119  Q
     | ||||||||||||||    
T  36734074 gaatttcgtcctcgaaa 36734058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 23550154 - 23550320
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||| | || |||||||||||||||||| || |||||  ||| || |||||||| || |||| |||||| ||||| |  |    
T  23550154 agggcgttacaactctccccaact-ataagattttcgtcctcgaaaatttacctcatgcaaacaactctggatatgattccatcatcttactctctattt 23550252  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  23550253 cccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctcattgcctctc 23550320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 11358922 - 11358824
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  11358922 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatctctttacctctc 11358824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 20832286 - 20832475
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  20832286 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacga 20832384  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||| | ||||||| |||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  20832385 ctcccgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatctctttacctctc 20832475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 31829959 - 31830148
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  31829959 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacga 31830057  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  31830058 ctcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 31830148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 1063143 - 1063241
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  1063143 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 1063241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 21146147 - 21145981
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| ||||||| |||||| ||||| | |||    
T  21146147 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccatcatcttactctcaagctc 21146048  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||| | |||||||  | ||| ||   |||||||||| |||| |||||||||||||||||||||    
T  21146047 ccacgtctagctttcacgagtcgcccccgtccaaacgactctcacgagaggtatctccttgcctctc 21145981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 23061626 - 23061792
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||| ||||||||||| || ||||   ||| || |||||||| || ||||||||||| ||||  | |||    
T  23061626 gggcgttacaactctccccaacttataagattttcatcctcgaaaatttacctcaaacaaacaactctggataagattccagcatcttactctgtagctc 23061725  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | || ||   ||||||||||| ||||||||||||||||||||||||||    
T  23061726 ccacgttaagctttcaccagtcgttctgtcccaaacgactctcacaagaggtatctccttgcctctc 23061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 20005716 - 20005635
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  20005716 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagggtgttaca 20005635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 28344724 - 28344643
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  28344724 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagagcgttaca 28344643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 30800257 - 30800381
Alignment:
Q  22 ataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    |||||||| || ||| ||| |||||| | ||||||||| |||||||  ||| ||||||||| || ||||||||||||| |||||||||||||||||||||    
T  30800257 ataaattactctaaaggactctaaacccaataaaataattaaataaataat-agggcgttataactctcccccacttaaaatattttcgtcctcgaaaat 30800355  T
Q  122 gtatctcattgaaataaatctggata 147  Q
    ||| |||||| ||| || ||||||||    
T  30800356 gtacctcattcaaacaactctggata 30800381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 23265541 - 23265708
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || |||||||| |||||| ||||||| ||||||| |    
T  23265541 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggataagactcccgcatcttactctccagc 23265639  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  23265640 tcccaagtcaaactttcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 23265708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 19647543 - 19647613
Alignment:
Q  54 aaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgta 124  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  19647543 aaataaataaataataaaatagggcgttacaactctcccccacttagaatattttcgtcctaaaaaatgta 19647613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 27385826 - 27385700
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27385826 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 27385727  T
Q  175 ctacgtcaaactttcaccggccgctcc 201  Q
    | ||||||| |||||||| | ||||||    
T  27385726 ccacgtcaagctttcaccagtcgctcc 27385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 45536232 - 45536313
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||| ||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  45536232 acacatcacaattaatcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagcgcgttaca 45536313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 22757505 - 22757413
Alignment:
Q  149 gactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||||| ||||||| |||| ||||||| |||||||| | ||||||  |||||||||||  |||||||| ||||||||||||||||    
T  22757505 gactccagcatcttactctccagctcccacgtcaagctttcaccagtcgctccatcccaaacgactcgcacaagagatatctccttgcctctc 22757413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 24653703 - 24653838
Alignment:
Q  106 tttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccc 205  Q
    ||||||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |||| | |||||||| |||||||   |||| |||    
T  24653703 tttcgtcctcgaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagtcaaactctcaccggttactccaccc 24653802  T
Q  206 caaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| || ||||| |||||||| ||||||||||||    
T  24653803 caaacaaccttcactagaggtatatccttgcctctc 24653838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 229
Target Start/End: Complemental strand, 21326382 - 21326228
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||||||||||| ||||| | |||    
T  21326382 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccagcatcttactctcaagctc 21326283  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatc 229  Q
    | |||| || |||||||| | ||||||  || |||||||| | ||||| ||||||    
T  21326282 ccacgttaagctttcaccagtcgctccgtcctaaacgactctaacaaggggtatc 21326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 22325958 - 22325841
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||  | || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  22325958 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaattcaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 22325859  T
Q  175 ctacgtcaaactttcacc 192  Q
    | ||||||| ||||||||    
T  22325858 ccacgtcaagctttcacc 22325841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 23801718 - 23801799
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||| ||||| ||||| |||||||||||| ||||||||| ||||||||||| ||||| ||||||    
T  23801718 acacatcacaattattcaaatacattatacaaaaagacactaaactcaataaaataaataaataataaaatagggtgttaca 23801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 27366196 - 27366029
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||| ||||||||| ||||||| || |||| |    
T  27366196 tagggcgttacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactctgggtacgactcccgcatcttactttccagc 27366098  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || |||||||| || | |||||| |||||||||||| ||||||| |||||||| || ||||||    
T  27366097 tcccaagttaaactttctccagtcgctccaccccaaacgactctcacaagcggtatctctttacctctc 27366029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 23293290 - 23293451
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || | ||||||||||||| ||||||| ||||||| |||| |     
T  23293290 gttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactttggatacgactcccgcatcttactctccagctcccaa 23293388  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||| |||||||   |||| |||| ||| || ||||| |||||||| ||||||||||||    
T  23293389 gtcaaactctcaccggttactccacccccaacaaccttcactagaggtatatccttgcctctc 23293451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 28350545 - 28350604
Alignment:
Q  70 aattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctca 129  Q
    |||||||||||||||| ||||||| ||||| |  ||||||||||||||||||||| ||||    
T  28350545 aattagggcgttacaactctccccaacttaaagaattttcgtcctcgaaaatgtacctca 28350604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 23276184 - 23276269
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||| ||||||| |||| | |||||||||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  23276184 gcatcttactctccagctcccaagtcaaactttcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 23276269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 10743650 - 10743608
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  10743650 ctaaactcaataaaataaataaataataaaatagggcgttaca 10743608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 12830368 - 12830410
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcga 117  Q
    ||||||||||| ||||||||||||| || ||||||||||||||    
T  12830368 gggcgttacaactctcccccacttaaaagattttcgtcctcga 12830410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 19802721 - 19802785
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||| || | ||||||||||||||    
T  19802721 aaaataattaaataataa-ttagggcgttacaactctccccaactta-aagaatttcgtcctcgaaa 19802785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 23968151 - 23968109
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  23968151 ctaaactcaataaaataaataaataataaaatagggcgttaca 23968109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 24944769 - 24944859
Alignment:
Q  150 actccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||| ||||||| ||||||| |||| | |||||||| ||||| |   |||| |||||||| || ||||| |||||||| |||||||||||    
T  24944769 actcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctct 24944859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 25142732 - 25142774
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  25142732 ctaaactcaataaaataaataaataataaaatagggcgttaca 25142774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 23613666 - 23613707
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  23613666 taaactcaataaaataaataaataataaaatagggcgttaca 23613707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 25085884 - 25085925
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  25085884 taaactcaataaaataaataaataataaaatagggcgttaca 25085925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 30800665 - 30800729
Alignment:
Q  22 ataaattattcaaaatgacactaaactcgataaaataactaaat-aataaattagggcgttacaa 85  Q
    ||||||||||| ||| ||| |||||||  ||||||||| ||||| |||||| |||||||||||||    
T  30800665 ataaattattctaaaggactctaaactaaataaaataattaaataaataaaatagggcgttacaa 30800729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 21661587 - 21661822
Alignment:
Q  13 attattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  21661587 attattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggtgttacaactctccccaacttagaatattttcgtc 21661686  T
Q  113 ctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacga 212  Q
    |||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||| |    
T  21661687 ctcgaaaatgtacctcattcaaataactttggatacgactccagcatcttgctctccaactcccacgtcaaactttcaccagccacttctccccaaacaa 21661786  T
Q  213 ctttcacaagaggtatctccttgcctctctgcttct 248  Q
    ||||||||||||| ||||||||||||||| ||||||    
T  21661787 ctttcacaagaggcatctccttgcctctcagcttct 21661822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 15203531 - 15203728
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| |||||||||  ||||||| || ||||||||||||| ||||||| ||||| |  ||||||||||||||||||||| |||||  ||| || ||    
T  15203531 ctaaactcaataaaataatcaaataattaaatagggcgttacaactctccccaacttatagaattttcgtcctcgaaaatgtacctcatgcaaacaactc 15203630  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||| ||||| || |||||||| ||||||||| |||| || |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  15203631 tggataagactctagtatcttgctttccaactcccacgttaagctttcaccagccgctccttcccaaacgaatttcacaagaggtatctccttgcctc 15203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 14332082 - 14332248
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  14332082 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 14332181  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  14332182 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 14332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 23517354 - 23517188
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  23517354 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 23517255  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  23517254 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 23517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 8707290 - 8707453
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  8707290 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 8707389  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcct 238  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||||||||||    
T  8707390 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcct 8707453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 12254624 - 12254457
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    ||||| |||||| ||||||| ||||| ||  ||||||||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  12254624 agggcattacaactctccccaacttataaggttttcgtcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagct 12254525  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  12254524 cccacgttaagctttcaccagtcgctccttcccaaacgactttcacaagaggtatctctttgcctctc 12254457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 14347489 - 14347688
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| ||| |||| ||   ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||    
T  14347489 ctaaactcaacaaaataattaattaatcaaaatgggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactc 14347588  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| |||||||||||| | || || |||||| | | ||||||  |||||| ||||||||||||||||||||| |||||||||    
T  14347589 tggataagactccagcatcttactctccaactcccatgttaagctttcatcagtcgctccatcccaaatgactttcacaagaggtatctctttgcctctc 14347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 10870680 - 10870846
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||| ||||||||||||||||||| ||||| | |||    
T  10870680 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactcttgatacgactccagcatcttactctcaagctc 10870779  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  10870780 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 10870846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 11237798 - 11237632
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||| ||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  11237798 gggcgtttcaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 11237699  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  11237698 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 11237632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15161642 - 15161476
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| |||||||| |||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  15161642 gggcgttacaactctccccctcttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 15161543  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  15161542 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 15161476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 18552343 - 18552177
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  18552343 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 18552244  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||||||| |||||    
T  18552243 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgtctctc 18552177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 17902 - 17735
Alignment:
Q  75 gggcgttacaat-tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||  ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | ||    
T  17902 gggcgttacaaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagct 17803  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  17802 cccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 17735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 8198313 - 8198479
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||    || || |||||||| |||||||||||||| ||||| | |||    
T  8198313 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctc 8198412  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| | || |||||||||||||||||||||    
T  8198413 ccacgtcaagctttcaccagtcgctcccgaccaaacgactcttacgagaggtatctccttgcctctc 8198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 11553687 - 11553521
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  11553687 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 11553588  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||| || ||||||    
T  11553587 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctctttacctctc 11553521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 12687186 - 12687352
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||| | | |||    
T  12687186 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagaaaacaattctggataagactccagcatcttactcccaagctc 12687285  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||| |||||||||    
T  12687286 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcctctc 12687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 13685748 - 13685914
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| |||||||| |||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  13685748 gggcgttacaactctccccctcttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 13685847  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||||||  ||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  13685848 ccacgtcaagttttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 13685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 11388991 - 11388824
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||  |||| || |||||||| |||||| ||||||| ||||||| |    
T  11388991 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaggaaacaactctggataagactcccgcatcttactctccagc 11388893  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  11388892 tcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 11388824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 14037459 - 14037658
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| ||| |||| ||   ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||    
T  14037459 ctaaactcaacaaaataattaattaatcaaaatgggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactc 14037558  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| || ||||||||| | || |  |||||| |   ||||||| |||||| ||||||||||||||||||||| |||||||||    
T  14037559 tggataagactccagcatcttactttccaactcccatgttatgctttcatcattcgctccttcccaaatgactttcacaagaggtatctctttgcctctc 14037658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15164005 - 15163840
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||  ||||| || |||||||||||||||||| || |||||  ||| || || ||||| || ||||||||||| ||||| | |||    
T  15164005 gggcgttacaactctccca-acttaaaagattttcgtcctcgaaaatttacctcatgcaaacaactccggataagattccagcatcttactctctagctc 15163907  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  15163906 ccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctctttgcctctc 15163840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 18177427 - 18177589
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || || ||||| ||||||||||||||  |||| | |||    
T  18177427 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactccggataagactccagcatcttattctcaagctc 18177526  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||    
T  18177527 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcc 18177589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 44791936 - 44791770
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  | |||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  44791936 gggcgttacaactctcccccacttaaaggactttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 44791837  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| | || |||||||||||||||||||||    
T  44791836 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctgacgagaggtatctccttgcctctc 44791770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 11306852 - 11306663
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  11306852 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacga 11306754  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  11306753 ctcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 11306663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 13634302 - 13634140
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||  ||||| || |||||||||||| ||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| ||    
T  13634302 gttacaactctcccgaacttaaaagattttcgtcctcaaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccac 13634203  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||||| | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  13634202 gtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 13634140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 33060747 - 33060828
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  33060747 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagggcgttaca 33060828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 13665252 - 13665419
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  13665252 tagggcgttacaattctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagc 13665350  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| |||||||| || |||||||||    
T  13665351 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatctttgcctctc 13665419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 8212626 - 8212528
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  8212626 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 8212528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 26119170 - 26118981
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  26119170 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacga 26119072  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| ||||||| |||| | |||||||||||| | | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  26119071 ctcccgcatcttactctccagctcccaagtcaaactttcatcagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 26118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 38300106 - 38300187
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  38300106 acacatcacaattattcaaataaattatacaaaaagacactaaactcaataaaataaataaataataaaatagggcgttaca 38300187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 42565197 - 42565116
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  42565197 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatagtgcgttaca 42565116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 49152052 - 49152150
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| |||| || ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  49152052 ggatacgactcccgcattttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 49152150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 12207298 - 12207198
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| ||||||| |||||| |||| || |||| | |||||||||||||| |  |||||||||||||| ||||| || |||||||||||||||||||    
T  12207298 tctggataagactccaacatcttactctgcagctcccatgtcaaactttcaccagatgctcctccccaaacaacttttactagaggtatctccttgcctc 12207199  T
Q  240 t 240  Q
    |    
T  12207198 t 12207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 12455460 - 12455555
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| |||||||  |||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  12455460 tacgactcccgcatcttattctccatctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 12455555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 6413262 - 6413363
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||||    
T  6413262 tctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcctc 6413361  T
Q  240 tc 241  Q
    ||    
T  6413362 tc 6413363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 33555802 - 33555730
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttac 83  Q
    |||||||||| |||||||||   ||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  33555802 caattattcaaataaattatattaaaagacactaaactcgataaaataaataaataataaaatagggcgttac 33555730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 19146965 - 19147062
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||| |||||| ||||||| ||||||| |||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| |||||||||||    
T  19146965 ggataagactcccgcatcttactctccagctcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctct 19147062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 20746364 - 20746461
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||| |||||| ||||||| ||||||| |||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| |||||||||||    
T  20746364 ggataagactcccgcatcttactctccagctcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctct 20746461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 16072862 - 16072695
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||  |||||||  |||| |||||||||||   || ||||   ||| || |||||||| || ||| ||||||| ||||||| |    
T  16072862 tagggcgttacaactctcccaaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggataagattcccgcatcttactctccagc 16072764  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  16072763 tcccaagtcaaactttcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 16072695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 1899 - 1804
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||| ||||| |   |||| |||||||| |||||||| |||||||| ||||||||||||    
T  1899 tacgactcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactagaggtatgtccttgcctctc 1804  T

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Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 16950969 - 16950868
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||| ||||||||| | ||||| ||||||| |||| | || ||||||||||| |   |||| |||||||| |||||||| |||||||| ||||||||||    
T  16950969 tctgggtacgactcccgtatcttactctccagctcccaagtgaaactttcaccagttactccaccccaaacaactttcactagaggtatgtccttgcctc 16950870  T
Q  240 tc 241  Q
    ||    
T  16950869 tc 16950868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 26288534 - 26288433
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||| |||||||||  |||||| ||||||| |||| | |||||||| ||||| |   |||| |||||||| |||||||| |||||||| ||||||||||    
T  26288534 tctgggtacgactcccacatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactagaggtatgtccttgcctc 26288435  T
Q  240 tc 241  Q
    ||    
T  26288434 tc 26288433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 14264738 - 14264642
Alignment:
Q  144 gatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    |||| |||||| ||||||| ||||||| |||| | ||||||||||||||||   | | ||||||||| || ||||| |||||||| |||||||||||    
T  14264738 gataagactcccgcatcttactctccagctcccaagtcaaactttcaccggttacacttccccaaacaaccttcactagaggtatatccttgcctct 14264642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 14129627 - 14129721
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| || ||| ||||||| || |||| |||| | |||||||||||||| | |||||| ||||||| |||| ||||||| ||||| ||||||||    
T  14129627 ggatatgaatcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaatgactctcacaaggggtatttccttgcc 14129721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 14433445 - 14433539
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| || ||| ||||||| || |||| |||| | |||||||||||||| | |||||| ||||||| |||| ||||||| ||||| ||||||||    
T  14433445 ggatatgaatcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaatgactctcacaaggggtatttccttgcc 14433539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 15340250 - 15340344
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| || ||| ||||||| || |||| |||| | ||||| |||||||| | ||||||| ||||||||||| ||||||| ||||| ||||||||    
T  15340250 ggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccttcccaaacgactctcacaaggggtatttccttgcc 15340344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 17000169 - 17000214
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  17000169 ctaaactcaataaaataaataaataataaaatagggcgttacaatt 17000214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 3288306 - 3288348
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  3288306 ctaaactcaataaaataaataaataataaaatagggcgttaca 3288348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 13314777 - 13314727
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttac 83  Q
    |||| ||| |||||||| ||||||||| ||||||||||| |||||||||||    
T  13314777 aaaaagactctaaactcaataaaataaataaataataaaatagggcgttac 13314727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 14179872 - 14179830
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  14179872 ctaaactcaataaaataaataaataataaaatagggcgttaca 14179830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 15118671 - 15118629
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  15118671 ctaaactcaataaaataaataaataataaaatagggcgttaca 15118629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 20251741 - 20251699
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  20251741 ctaaactcaataaaataaataaataataaaatagggcgttaca 20251699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 1493642 - 1493576
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||  |||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  1493642 aaaataattaaataa--aattggggcgttacaactctccccaacttaaagaattttcgtcctcgaaaat 1493576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 9256001 - 9256054
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  9256001 aaaaagactctaaactcaataaaataaataaataataaaatagggtgttacaat 9256054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 9314249 - 9314196
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  9314249 aaaaagactctaaactcaataaaataaataaataataaaatagggtgttacaat 9314196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 11085871 - 11085947
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| |||||||| ||  |||||||||||| ||| |||| |||| || | ||||||||||||||    
T  11085871 ctaaactccataaaataattaaataattaaagagggcgttacaactctacccc-cttaaaagaatttcgtcctcgaaa 11085947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 13021113 - 13021186
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcac 219  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||  | ||||||  ||||||||||| ||||    
T  13021113 tacgactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccatcccaaacgactctcac 13021186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 14286858 - 14286777
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||||| || |||| |||| | ||||| |||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  14286858 gcatcttactttccagctcccaagtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 14286777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 16928957 - 16928891
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||  |||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  16928957 aaaataattaaataa--aattggggcgttacaactctccccaacttaaagaattttcgtcctcgaaaat 16928891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 18073800 - 18073755
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| ||||||||||| ||||| |||||||||    
T  18073800 ctaaactcaataaaataaataaataataaaatagggtgttacaatt 18073755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 23556715 - 23556792
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| |||||||||  ||||||| || |||||||| |||| ||| |||| |||| || | ||||||||||||||    
T  23556715 ctaaactcaataaaataatcaaataattaaatagggcgtcacaactctaccccccttaaaagaatttcgtcctcgaaa 23556792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 46385502 - 46385461
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  46385502 taaactcaataaaataaataaataataaaatagggcgttaca 46385461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 15114228 - 15114280
Alignment:
Q  69 aaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  15114228 aaattggggcgttacaactctccccaacttaaagaattttcgtcctcgaaaat 15114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 36300337 - 36300268
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||| |||||||||   ||| | |||||||||||||||||    ||||||||||| ||||||||||||    
T  36300337 caattattcaaataaattatattaaaaggcactaaactcgataaaa----taaataataaaatagggcgttaca 36300268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 21404392 - 21404627
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaa 102  Q
    |||||||  ||||||||||||||||||| | ||| ||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  21404392 acacatcataattattcacataaattatgccaaaagacactaaacttgataaaataaataaataataaaatagggcgttacaactctcccccacttagaa 21404491  T
Q  103 tattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcct 202  Q
    |||||||||||| ||||||||| ||| || |||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||| | |||||||||    
T  21404492 tattttcgtccttgaaaatgtacctctttcaaataactctagatacgactccagcatcttactctccaactcccacgtcaaactttcatcagccgctcct 21404591  T
Q  203 ccccaaacgactttcacaagaggtatctccttgcct 238  Q
     |||||||||||||||||||||||||||||||||||    
T  21404592 tcccaaacgactttcacaagaggtatctccttgcct 21404627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 20468876 - 20468686
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    |||||||||  |||||||  |||||||||||||| |||| ||| ||||| |  ||||||||||||||||||||| |||||  ||| || |||||| | ||    
T  20468876 ataaaataatcaaataattcattagggcgttacatttctgcccaacttacagaattttcgtcctcgaaaatgtacctcatgtaaacaactctggaaaaga 20468777  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| || ||||||||| |||| ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||    
T  20468776 ctccagcatcttactttccaactcccacgttaaactttcaccagtcgctccttcccaaacgaccttcacaagaggtatctccttgcctctc 20468686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 26739497 - 26739304
Alignment:
Q  42 ctaaactcgataaaataactaaataata-aattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    |||||||| | ||||||| ||||||||  ||  |||||||||||| ||||||| ||||| ||||||||||||||||||||| || |||||  ||| || |    
T  26739497 ctaaactcaacaaaataattaaataattcaaagagggcgttacaagtctccccaacttataatattttcgtcctcgaaaatttacctcatgcaaacaatt 26739398  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctcctt 234  Q
    ||||||| |||||||||||||| |||||||||||| |||| || |||||||| | ||||||  ||||||||||||||||||||||||| |||||    
T  26739397 ctggataagactccagcatcttactctccaactcccacgttaagctttcaccagtcgctccgtcccaaacgactttcacaagaggtatttcctt 26739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 21344149 - 21343950
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| |||||||| ||  |||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||    
T  21344149 ctaaactcaacaaaataattaaataatcaaagagggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactc 21344050  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| || ||||||||| |||| |  ||||||||   ||||||  |||||||||||||||||||||||||||| |||||||||    
T  21344049 tggataagactccagcatcttactttccaactcccacgttaggctttcaccaatcgctccgtcccaaacgactttcacaagaggtatctctttgcctctc 21343950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 22333645 - 22333479
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  22333645 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 22333546  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  22333545 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 22333479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 27669248 - 27669082
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27669248 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaaaaactctggataagactccagcatcttactctcaagctc 27669149  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27669148 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 27669082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 41770470 - 41770636
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  41770470 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctc 41770569  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  41770570 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 41770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 21662818 - 21662631
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |  |||||||||||||||||  || |||| | ||| || |||||||| ||||    
T  21662818 aaaataattaaataagaa-ttagggcattacaactctccccaacttaaagaattttcgtcctcgaaaacatacctcaatcaaacaactctggataagact 21662720  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||| |||||||||||| |||||||||| ||||| |   ||||||||||||| |||||||| |||| ||||||||||||||||    
T  21662719 ccaacatcttactctccaactcccacgtcaaactctcaccagtttctcctccccaaacaactttcactagagatatctccttgcctctc 21662631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 22344701 - 22344900
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  22344701 ctaaactcgattaaataaacaattaacaaaagtgggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 22344800  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| ||||||||||| || ||||| | |||| ||||||| |||||||| ||||||||   |||||||||| |||  |||||||||||||||||||||    
T  22344801 tggataagactccagcattttactctcaagctcccacgtcaagctttcaccagccgctcccgtccaaacgactctcatgagaggtatctccttgcctctc 22344900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15000497 - 15000331
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  15000497 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 15000398  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | || |||   |||||||||| |||| |||||||||||||||||||||    
T  15000397 ccacgtcaagctttcaccagtcgttcccgtccaaacgactctcacgagaggtatctccttgcctctc 15000331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16356130 - 16356296
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16356130 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16356229  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16356230 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 22134296 - 22134462
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  22134296 gggcgttacaactctcccccacttaaaagattttcatcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 22134395  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  22134396 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 22134462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27518035 - 27518201
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27518035 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 27518134  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27518135 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 27518201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27609982 - 27610148
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27609982 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggataagactccagcatcttactctcaagctc 27610081  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27610082 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 27610148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 29476831 - 29476665
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  29476831 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 29476732  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| | |||||||||||||||||||    
T  29476731 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgataggtatctccttgcctctc 29476665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 34566122 - 34566288
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  34566122 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 34566221  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  34566222 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 34566288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 40708408 - 40708574
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  40708408 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 40708507  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  40708508 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 40708574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 19769588 - 19769754
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||||||| |||||| ||||  | |||    
T  19769588 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggataagactccatcatcttactcttaagctc 19769687  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  19769688 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 19769754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 27686157 - 27685992
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| |||||||| |||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27686157 gggcgttacaactctccccctcttaaaagattttcgtcctcgaaaat-tacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 27686059  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27686058 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 27685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 21564645 - 21564544
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||||||||||| |||||||  ||| | |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  21564645 tctggataagactccagcatcttactctccagttcccatgtcaaactttcaccagccgctcctccccaaacgacttttactagaggtatctccttgcctc 21564546  T
Q  240 tc 241  Q
    ||    
T  21564545 tc 21564544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 21985065 - 21984897
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||| |||| || ||||||||||| ||||| | |    
T  21985065 tagggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagattccagcatcttactctctagc 21984966  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||| || |||||||| | ||||||  ||||||||||| |||||||| |||||||||||||||||    
T  21984965 tcccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaagtatctccttgcctctc 21984897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 23470864 - 23471024
Alignment:
Q  82 acaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtc 181  Q
    |||| ||||||| ||||| |  |||||||||||| ||||| || ||| |  ||| || |||||||| || ||||||||||| |||||||||||| ||||     
T  23470864 acaactctccccaacttataggattttcgtcctcaaaaatttacctcgtgcaaacaactctggataagattccagcatcttactctccaactcccacgtt 23470963  T
Q  182 aaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctct 242  Q
    || |||||||| ||||||||  ||||||||||||||||||||||||| || ||||||||||    
T  23470964 aagctttcaccagccgctccgtcccaaacgactttcacaagaggtatgtctttgcctctct 23471024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 23573370 - 23573536
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||| |||| ||||| |||||||| ||| | | |||    
T  23573370 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactctagcatcttactcccaagctc 23573469  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | |||||| | |||||||||| ||||||| ||||||||||||||||||    
T  23573470 ccacgtcaagctttcaccagtcgctccgctccaaacgactctcacaaggggtatctccttgcctctc 23573536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 37292254 - 37292088
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| |||||| ||||||  | |||||||||||||||||| || ||||   ||| || |||||||  |||||||||||||| || || | |||    
T  37292254 gggcgttacaactctccctcacttaagagattttcgtcctcgaaaatttacctcaagcaaacaactctggatgagactccagcatcttactttcaagctc 37292155  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| ||||||||||||||||||||||||||    
T  37292154 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacaagaggtatctccttgcctctc 37292088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 24736370 - 24736203
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  24736370 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagtaaacaactctggatacgactcctgcatcttactctccagc 24736272  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | |||||| |||||||| ||| |||||||||||||||| || ||||||    
T  24736271 tcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatctctttacctctc 24736203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 24737544 - 24737377
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  24737544 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagtaaacaactctggatacgactcctgcatcttactctccagc 24737446  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | |||||| |||||||| ||| |||||||||||||||| || ||||||    
T  24737445 tcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatctctttacctctc 24737377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 24750313 - 24750146
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  24750313 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagtaaacaactctggatacgactcctgcatcttactctccagc 24750215  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | |||||| |||||||| ||| |||||||||||||||| || ||||||    
T  24750214 tcccaagtcaaactttcaccagtcgctccaccccaaacaactctcacaagaggtatctctttacctctc 24750146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 26681872 - 26682034
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||| ||||| || || ||||||||||||||| |||||||   ||| || |||||||| |||||||||||||| ||||| | |||| ||    
T  26681872 gttacaactctccccaacttaaaagatattcgtcctcgaaaatttatctcaagcaaacaactctggataagactccagcatcttactctcaagctcccac 26681971  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||||| | |||||   ||||||||||| | ||||| ||||| ||||||||||||    
T  26681972 gtcaagctttcaccagtcgctctagcccaaacgactctaacaaggggtatttccttgcctctc 26682034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 26953479 - 26953641
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||| ||||| || || ||||||||||||||| |||||||   ||| || |||||||| |||||||||||||| ||||| | |||| ||    
T  26953479 gttacaactctccccaacttaaaagatattcgtcctcgaaaatttatctcaagcaaacaactctggataagactccagcatcttactctcaagctcccac 26953578  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||||| | |||||   ||||||||||| | ||||| ||||| ||||||||||||    
T  26953579 gtcaagctttcaccagtcgctctagcccaaacgactctaacaaggggtatttccttgcctctc 26953641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 21625145 - 21625312
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || |||||||| |||||| ||||||| ||||||| |    
T  21625145 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggataagactcccgcatcttactctccagc 21625243  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||||    
T  21625244 tcccacgtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctctc 21625312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 22502357 - 22502455
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| |||||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  22502357 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccacccaaaacgactctcacaagaggtatcttcttacctctc 22502455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 14887684 - 14887596
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||    
T  14887684 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctc 14887596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 235
Target Start/End: Original strand, 18775405 - 18775565
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  18775405 gggcgttacaactctcccccacttaaaagattttcgtcttcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 18775504  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttg 235  Q
    | ||||||| |||||| | | ||||||  ||||||||| | | ||||| ||||| ||||||    
T  18775505 ccacgtcaagctttcatcagtcgctccagcccaaacgattctgacaaggggtatttccttg 18775565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 20573117 - 20573315
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| || ||||| ||  |||| ||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||    
T  20573117 ctaaactcaacaaaataattatataatcaaagaggg-gttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactc 20573215  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||| | ||||| | |||| | || || |||||||| | ||||||  |||| |||||||||||||||||||| || || ||||||    
T  20573216 tggataagactccagcatcgtactctctagctcccatgttaagctttcaccagtcgctccgtcccagacgactttcacaagaggtatatctttacctctc 20573315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 23080776 - 23080681
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | ||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  23080776 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactctcagaagaggtatctccttgcctctc 23080681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 23443052 - 23442886
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || | ||   |||||| |||||||| |||||| ||||||| ||||||| |    
T  23443052 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattaccacaagcaaataactctggataagactcccgcatcttactctccagc 23442954  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||| ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||| |||||    
T  23442953 tcctaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttacctct 23442886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 19227440 - 19227362
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgtt 81  Q
    ||||||| |||||||||| ||||||||| ||||| || ||||||||||||||||||| ||||||||||| |||||||||    
T  19227440 acacatcacaattattcaaataaattatacaaaaagaaactaaactcgataaaataaataaataataaaatagggcgtt 19227362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 20341957 - 20342055
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| |||||||  ||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  20341957 ggatacgactcccgcatcttactctccagttcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 20342055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 37546190 - 37546092
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||| || || ||||||    
T  37546190 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatttctttacctctc 37546092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 6403307 - 6403140
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||||||||| ||||||| ||||||| |    
T  6403307 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactccggatacgactcccgcatcttactctccagc 6403209  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  6403208 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 6403140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 24799181 - 24799002
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  24799181 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaaacaaacaactccggatacga 24799083  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    |||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| | |||||||| |||||    
T  24799082 ctcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctaacaagaggaatctc 24799002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 25847750 - 25847838
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||| | ||||||||||||||||    
T  25847750 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgaatctcacaagaggtatctc 25847838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 21496242 - 21496408
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||||| |    
T  21496242 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactccggataagactcccgcatcttactctccagc 21496340  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | |||||||||||||| |   ||||||||||||| || || || |||||||| |||||||||||    
T  21496341 tcccaagtcaaactttcaccagttactcctccccaaacaaccttaactagaggtatatccttgcctct 21496408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 22380880 - 22380975
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| || |||| |||| | |||||||||||||  | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  22380880 tacgactcccgcatcttactttccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 22380975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 28895701 - 28895544
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||||| ||  ||||||| || ||||      
T  28895701 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactcaggatacgattcttgcatcttactttccagt 28895603  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||| | ||||||||||||||||  ||||| |||||||| ||| | ||||||||||||||    
T  28895602 tcccaagtcaaactttcaccggttgctccaccccaaacaactcttacaagaggtatctc 28895544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 28924527 - 28924370
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||||| ||  ||||||| || ||||      
T  28924527 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactcaggatacgattcttgcatcttactttccagt 28924429  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||| | ||||||||||||||||  ||||| |||||||| ||| | ||||||||||||||    
T  28924428 tcccaagtcaaactttcaccggttgctccaccccaaacaactcttacaagaggtatctc 28924370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 16221360 - 16221437
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||| ||| || | |||| || | ||| ||||||||||    
T  16221360 ctaaactcaataaaataaataaataataaaatagggcgttacaactctacctcccttaaaagaattttgtcctcgaaa 16221437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 16222849 - 16222921
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctc 115  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || | ||||||||||    
T  16222849 ctaaactcaataaaataaataaataataaaatagggcgttacaactctacccc-cttaaaagaatttcgtcctc 16222921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 19923665 - 19923738
Alignment:
Q  46 actcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||| ||||||||| ||||||||||| ||||||||||||| |||  ||| |||| || | ||||||||||||||    
T  19923665 actcaataaaataaataaataataaaatagggcgttacaactctatcccccttaaaagaatttcgtcctcgaaa 19923738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 19926388 - 19926465
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||| ||| ||||||||||||| |||  ||| |||| || | ||||||||||||||    
T  19926388 ctaaactcaataaaataaataaataacaaaatagggcgttacaactctatcccccttaaaagaatttcgtcctcgaaa 19926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 22236613 - 22236512
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||| |||||||||| ||||||| ||||| | |||| | |||||||| |||||||   | || |||||||| || ||||| |||||||| ||||||||||    
T  22236613 tctgaatacgactcccgcatcttactctctagctcccaagtcaaactctcaccggttaccccaccccaaacaaccttcactagaggtatatccttgcctc 22236514  T
Q  240 tc 241  Q
    ||    
T  22236513 tc 22236512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 17270009 - 17269929
Alignment:
Q  157 catcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||| |  ||||| ||||||||    
T  17270009 catcttactctccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcaccaagggtatttccttgcc 17269929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 18745411 - 18745455
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  18745411 ctaaactcaataaaataaataaataataaaatagggcgttacaat 18745455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 21556641 - 21556566
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  21556641 taaactcaataaaataaataaatattaaaatagggcgttacaactctacccc-cttaaaagaatttcgtcctcgaaa 21556566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 25422828 - 25422944
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||||||| |||||||| || ||||   ||| || |||||||| || | ||||||||| ||||| | |||    
T  25422828 gggcgttacaactctccccaacttataagattttcgtcgtcgaaaatttacctcaagcaaacaactctggataagatttcagcatcttactctctagctc 25422927  T
Q  175 ctacgtcaaactttcac 191  Q
    | |||| || |||||||    
T  25422928 ccacgttaagctttcac 25422944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 16224555 - 16224598
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  16224555 ctaaactcaataaaataaataaataataaaatagggcgttacaa 16224598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 20197235 - 20197192
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  20197235 ctaaactcaataaaataaataaataataaaatagggcgttacaa 20197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22112213 - 22112264
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||    
T  22112213 aaaaagactctaaactcaataaaataaataaataataaaatagggcgttaca 22112264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 16641563 - 16641640
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| |||||| |||| |||||| |||||| ||| |||  |||| || | ||||||||||||||    
T  16641563 ctaaactcaataaaataattaaatattaaaatagggcattacaactctacccaccttaaaagaatttcgtcctcgaaa 16641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 23669570 - 23669636
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||  |||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  23669570 aaaataattaaataa--aattcgggcgttacaactctccccaacttaaaggattttcgtcctcgaaaat 23669636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 14025371 - 14025331
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgtta 82  Q
    |||||||| ||||||||| ||||||||||| ||||||||||    
T  14025371 ctaaactcaataaaataaataaataataaaatagggcgtta 14025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 42 - 248
Target Start/End: Complemental strand, 6202 - 5996
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| ||||||||| ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| || ||    
T  6202 ctaaactcaataaaataaataaataataaaatagggcattacaactctcccccacttagaatattttcgtcctcgaaaatgtacctcatgcaaacaactc 6103  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| |||||||||||| |||||||| |||| ||  |||||||||||||||| ||||||||||||||||||||||||||| ||    
T  6102 tggatatgactccagcatcttactctccaactcccacgtcaaattttcgccaaccgctcctccccaaactactttcacaagaggtatctccttgcctttc 6003  T
Q  242 tgcttct 248  Q
     ||||||    
T  6002 agcttct 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 40 - 248
Target Start/End: Complemental strand, 59386 - 59178
Alignment:
Q  40 cactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaa 139  Q
    ||||||||| |||||||||| ||||||||||| |||| |||||||| |  ||||||||||||||||||||||||| ||||||  |||||||| ||||||     
T  59386 cactaaacttgataaaataaataaataataaaataggacgttacaacttccccccacttagaatattttcgtccttgaaaatacatctcattcaaataac 59287  T
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |  |||||||||||||||||||| |||||||| ||| || ||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  59286 tacggatacgactccagcatcttactctccaattcccacttcaaactttcaccagccgctccttcccaaacgattttcacaagaggtatatccttgcctc 59187  T
Q  240 tctgcttct 248  Q
    || ||||||    
T  59186 tcagcttct 59178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 18912 - 19009
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||| || ||| ||||||| || |||| |||| | || ||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  18912 tctggataagaatcccgcatcttactatccatctcccaagttaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 19009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 248
Target Start/End: Complemental strand, 15016387 - 15016194
Alignment:
Q  55 aataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactcc 154  Q
    ||||| ||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| || | |||||| ||||||    
T  15016387 aataaataaataataaaatacgacgttacaactctcccccacttagaatattttcgtcctcgaaaatgtacctcatgcaaacaactttggatatgactcc 15016288  T
Q  155 agcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctctgcttct 248  Q
    | || ||| |||||||| | | |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15016287 aacaacttactctccaatttccacgtcaaactttcaccagctgctcctccccaaacgactttcacaagaggtatctccttgcctctcagcttct 15016194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6003503 - 6003580
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggc 78  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6003503 tcacacatcgtaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggc 6003580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 15208184 - 15208372
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| ||  |||||||||||| || |||| ||||| |  |||||||||||||||||| || ||| |  ||| || || ||||| ||||    
T  15208184 aaaataatcaaataattaaagagggcgttacaaatccccccaacttataggattttcgtcctcgaaaatttacctcttgcaaacaactccggataagact 15208283  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||| |||||||||||| |||| || |||||||| ||| ||||| |||||||||||||||||||||||| ||| |||||||||    
T  15208284 ccagcatcttactctccaactcccacgttaagctttcaccagccactccttcccaaacgactttcacaagaggtacctctttgcctctc 15208372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 15247140 - 15247328
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| ||  |||||||||||| || |||| ||||| |  |||||||||||||||||| || ||| |  ||| || |||||||| ||||    
T  15247140 aaaataatcaaataattaaagagggcgttacaactccccccaacttataggattttcgtcctcgaaaatttacctcgtgcaaacaactctggataagact 15247239  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||| |||||||||||| || | || |||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  15247240 ccagcatcttactctccaactcccacattaagctttcaccagccactccttcccaaacgactttcacaagagatatctctttgcctctc 15247328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 320548 - 320714
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  320548 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctctatctc 320647  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | || | || |||||||| | ||||||  ||||||||||||||| |||||||||||| |||||||||    
T  320648 ccacattaagctttcaccagtcgctccgtcccaaacgactttcataagaggtatctctttgcctctc 320714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 6600062 - 6600228
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||||||||||| ||||||||||| ||||| | |||    
T  6600062 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggatacgattccagcatcttactctcaagctc 6600161  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   ||||||||||||||| ||||||||||| |||||||||    
T  6600162 ccacgtcaagctttcaccagtcgctcccgaccaaacgactttcacgagaggtatctctttgcctctc 6600228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 10004915 - 10005081
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| |  ||    
T  10004915 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttc 10005014  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  10005015 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 10005081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 10905525 - 10905691
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| |  ||    
T  10905525 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttc 10905624  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  10905625 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 10905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 12497563 - 12497729
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  12497563 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagctc 12497662  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||||||    
T  12497663 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcctctc 12497729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 13252005 - 13252171
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||||| || |||||||||||||| ||||| | |||    
T  13252005 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctgggtaagactccagcatcttactctcaagctc 13252104  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  13252105 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 13252171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15403325 - 15403159
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||||||||||| || ||||| | |||    
T  15403325 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcattttactctcaagctc 15403226  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  15403225 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 15403159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16635088 - 16635254
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16635088 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16635187  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16635188 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16635254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 43162412 - 43162578
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  43162412 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 43162511  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  43162512 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 43162578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 48424762 - 48424928
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  48424762 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 48424861  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  48424862 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 48424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 16807774 - 16807575
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| |||||| |||||||  || | |||| || ||| ||||||| ||||| || |||||||||||||||||| |||||||   ||| || ||    
T  16807774 ctaaactcgattaaataaataaataaacaaattgggcattgcaactctccccaacttaaaagattttcgtcctcgaaaatttatctcaagcaaacaattc 16807675  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| ||||| | |||| | ||||| |||||||| | ||||||  ||| ||||||| | ||||| ||||||||||||||||||    
T  16807674 tggataagactccagcatcttactctcaagctcccatgtcaagctttcaccagtcgctccagccctaacgactctaacaaggggtatctccttgcctctc 16807575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15349060 - 15348894
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  15349060 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 15348961  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| | || |||||||||||||||||||||    
T  15348960 ccacgtcaagctttcaccagtcgctcccgtccaaacgactcttacgagaggtatctccttgcctctc 15348894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15590207 - 15590041
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || || ||||||||||||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||    
T  15590207 gggcgttacaactctcccccacttaaaagatcttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctc 15590108  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  15590107 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 15590041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 15725748 - 15725582
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  15725748 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 15725649  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | |||||    |||||||||| |||| |||||||||||||||||||||    
T  15725648 ccacgtcaagctttcaccagtcgctctcgtccaaacgactctcacgagaggtatctccttgcctctc 15725582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 26793214 - 26793048
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| || ||||   ||| || | |||||| |||||||||||||| ||||| | |||    
T  26793214 gggcgttacaactctcccccacttaaaagattttcttcctcgaaaatttacctcaagcaaacaactatggataagactccagcatcttactctcaagctc 26793115  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  26793114 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 26793048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 11297372 - 11297172
Alignment:
Q  42 ctaaactcgataaaataactaaataa-taaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    ||||||||||| |||||| ||| ||| ||||   ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| ||||    
T  11297372 ctaaactcgattaaataattaattaaataaaagtgggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaaat 11297273  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    || |||| |||||||||||||| ||||| | |||| ||||||| |||||| | | ||||||  || |||||| | ||||||| |||||||||||||||||    
T  11297272 ctagataagactccagcatcttactctcaagctcccacgtcaagctttcatcagtcgctccgtcctaaacgattctcacaaggggtatctccttgcctct 11297173  T
Q  241 c 241  Q
    |    
T  11297172 c 11297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 14877314 - 14877148
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||| ||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||    
T  14877314 gggcgttacaactctccccaacttataagattttcgtcctctaaaatttacctcaagcaaacaactctagataagactccagcatcttactctctagctc 14877215  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| ||||||||||||| ||||||||||||    
T  14877214 ccacgtcaagctttcaccagtcgctccgttccaaacgactctcacaagaggtatatccttgcctctc 14877148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 16370729 - 16370890
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||| | || |||||||||||||||||| || |||||  ||| || |||||||| ||||| |||||||| ||||| | |||    
T  16370729 gggcgttacaactctccccaactaacaagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactctagcatcttactctcaagctc 16370828  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||| ||||||||||| ||||||| ||||| ||||||||    
T  16370829 ccacgtcaagctttcaccagtcgctcct-cccaaacgactctcacaaggggtatttccttgcc 16370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 16691475 - 16691640
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16691475 gggcgttacaactctcccccacttaaaagattttcatcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16691574  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    | |||| || |||||||| | ||||||  ||||||||||| | ||||| | |||||||||||||||    
T  16691575 ccacgttaagctttcaccagtcgctccagcccaaacgactctaacaagggatatctccttgcctct 16691640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 31944796 - 31944963
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||| | ||||||| |    
T  31944796 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactctggatacgactcccgcatcctactctccagc 31944894  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | ||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  31944895 tcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatctccttgcctctc 31944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 15338551 - 15338750
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| |||| |||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  15338551 ctaaactcgattaaataagcaattaacaaaagtgggcgttacaactctctcccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 15338650  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| | ||||||||||| || ||||| | |||| ||||||| |||||||| | ||||||   ||||| |||| |||| |||||||||||||||||||||    
T  15338651 tggacaagactccagcattttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaatgactctcacgagaggtatctccttgcctctc 15338750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 16757396 - 16757238
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || | ||||||||||||||||||||| ||||| | |||| ||    
T  16757396 gttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactatggatacgactccagcatcttactctcaagctcccac 16757297  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| |||||||| | ||||||   |||||||||| |||| ||||||||||| |||||    
T  16757296 gtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 16757238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 20062869 - 20062707
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||| ||||||||| || ||||   ||| || |||||||  |||||||||||||| ||||| | |||    
T  20062869 gggcgttacaactctcccccacttaaaagattttcgtactcgaaaatttacctcaagcaaacaactctggattagactccagcatcttactctcaagctc 20062770  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||| |||||    
T  20062769 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 20062707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 14974178 - 14974347
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    |||||||| |||| ||||| | ||||| || |||||||||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | |    
T  14974178 tagggcgtaacaactctcctcaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagc 14974277  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctct 242  Q
    ||| |||| || |||||||| |  | |||   |||||||||| |||||||||||||||||||||||||||    
T  14974278 tcccacgtgaagctttcaccagtggatccgtaccaaacgactctcacaagaggtatctccttgcctctct 14974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 31689428 - 31689261
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||| | ||||||| |    
T  31689428 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactctggatacgactcccgcatcctactctccagc 31689330  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  31689329 tcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacagggggtatctccttgcctctc 31689261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 9522033 - 9522200
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    ||||| |||||| ||||||  ||||| || |||||||||||||||||| || ||||   ||| || |||||||| || |||| |||||| ||||| | ||    
T  9522033 agggctttacaactctcccaaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagct 9522132  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||  ||||||||||| ||||||||||||| ||||||||||||    
T  9522133 cccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatatccttgcctctc 9522200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 9514058 - 9514224
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    ||||| |||||| ||||||  ||||| || |||||||||||||||||| || ||||   ||| || |||||||| || |||| |||||| ||||| | ||    
T  9514058 agggctttacaactctcccaaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagct 9514157  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    || |||| || |||||||| | ||||||  ||||||||||| ||||||||||||| |||||||||||    
T  9514158 cccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatatccttgcctct 9514224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 16492996 - 16492830
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||| ||||| || ||||   ||| || |||||||| || ||||||||||| ||||| | |||    
T  16492996 gggcgttacaactctccccaacttataacattttcgtcctctaaaatttacctcaagcaaacaactctggatatgattccagcatcttactctctagctc 16492897  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
      ||||||| |||||||| | |||| |  |||||||| || ||| ||||||||||||||||||||||    
T  16492896 gcacgtcaagctttcaccagtcgcttcgtcccaaacgtctctcataagaggtatctccttgcctctc 16492830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 53385833 - 53385671
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||| | ||| || || |   ||| || ||||||||||||||||||||||| ||||| | |||    
T  53385833 gggcgttacaactctcccccacttaaaagattttcgtcctcaataatttaccttaagtaaacaactctggatacgactccagcatcttactctcaagctc 53385734  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| ||||| || | ||||||   |||||||||| |||| ||||||||||| |||||    
T  53385733 ccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 53385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 48631644 - 48631728
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  48631644 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataattaaataagaaaatatggcgttacaatt 48631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 16330392 - 16330297
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | ||||||| |||||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  16330392 tacgactcccgcatcttactctccagctcccaagtcaaaccttcaccagtcgctccaccccaaacgactctcacaagaggtatctccttacctctc 16330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 17489165 - 17489331
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| |||||| ||||||| ||||| || ||| ||||| |||||||| || ||||   ||| || |||||||| || |||| |||||| ||||| | |||    
T  17489165 gggctttacaactctccccaacttataagattgtcgtcgtcgaaaatttacctcaagcaaacaactctggataagattccaacatcttactctctagctc 17489264  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | |||||   ||||||||||| ||||||||||||||||||||||||||    
T  17489265 ccacgttaagctttcaccagtcgctctgtcccaaacgactctcacaagaggtatctccttgcctctc 17489331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 3526893 - 3526825
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaa 71  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  3526893 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaa 3526825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 16338793 - 16338698
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | || ||| ||||| |||||| ||||||||||||||||||| ||||||    
T  16338793 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgttccaccccagacgactctcacaagaggtatctccttacctctc 16338698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 16810689 - 16810828
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||| | |||||||| ||||| | |||    
T  16810689 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagacgctagcatcttactctcaagctc 16810788  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgact 214  Q
    | ||||||| |||||||| | ||||||  |||||||||||    
T  16810789 ccacgtcaagctttcaccagtcgctccgtcccaaacgact 16810828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 6609775 - 6609868
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| |||||    
T  6609775 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctc 6609868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 10383380 - 10383457
Alignment:
Q  164 ctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||| |||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  10383380 ctctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatctctttacctctc 10383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 15227039 - 15227140
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||||| ||||| ||||||| |||| | |||||||||||||| |  ||||||||||| || ||||| || ||||||||||| |||||||    
T  15227039 tctggataagactccagaatcttactctccagctcccatgtcaaactttcaccagatgctcctccccacacaacttttactagaggtatctctttgcctc 15227138  T
Q  240 tc 241  Q
    ||    
T  15227139 tc 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 48043195 - 48043115
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| | |||||||| ||||||||  ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  48043195 acacatccccattattcaaataaattaaacaaaaagacactaaactcgataaaataa-taaataataaaatagggcgttaca 48043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 13972925 - 13972758
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||| ||||||||| ||||||| || |||| |    
T  13972925 tagggcgttacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactctgggtacgactcccgcatcttactttccagc 13972827  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || |||||||| || | |||||| |||||||||||| ||||||| |||||||| || ||||||    
T  13972826 tcccaagttaaactttctccagtcgctccaccccaaacgactctcacaagcggtatctctttacctctc 13972758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 14085997 - 14086164
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||| ||||||||| ||||||| || |||| |    
T  14085997 tagggcgttacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactctgggtacgactcccgcatcttactttccagc 14086095  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || |||||||| || | |||||| |||||||||||| ||||||| |||||||| || ||||||    
T  14086096 tcccaagttaaactttctccagtcgctccaccccaaacgactctcacaagcggtatctctttacctctc 14086164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 241
Target Start/End: Original strand, 14571176 - 14571339
Alignment:
Q  77 gcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcct 176  Q
    ||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || |||||||| |||||| ||||||| ||||| | ||||     
T  14571176 gcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaaacaaacaactctggataagactcccgcatcttactctctagctccc 14571274  T
Q  177 acgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  14571275 aagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 14571339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 11961767 - 11961672
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| | ||||| ||||||| |||| | |||||||||||||  | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  11961767 tacgactcccggatcttactctccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 11961672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 25202478 - 25202549
Alignment:
Q  13 attattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| | || |||||||    
T  25202478 attattcaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaatgggacgttaca 25202549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 36526476 - 36526562
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||| ||| |||||||| |  |||||| ||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||||    
T  36526476 aaaaagactctaaactcaaataaataagtaaataataaaatagggcgttacaactctccccaacttagaagaatttcgtcctcgaaa 36526562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 18135151 - 18134984
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| ||||||||||| | || ||||   ||| || |||| |||| ||||  ||||||| ||||||| |    
T  18135151 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaattttacctcaaacaaacaactctgtatacaactctcgcatcttactctccagc 18135053  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||  |||||||| ||||||||||||    
T  18135052 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcattagaggtatatccttgcctctc 18134984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 13028845 - 13028766
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    |||||||| ||||||||| |||||||| ||  |||| ||||||| ||||||||||||| |  ||||||||||||||||||    
T  13028845 ctaaactctataaaataattaaataattaaagagggtgttacaactctcccccacttatagaattttcgtcctcgaaaat 13028766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 11852890 - 11852991
Alignment:
Q  87 tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaact 186  Q
    ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| ||||||| ||    
T  11852890 tctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaaaaactctggataagactccagcatcttactctctagctcccacgtcaagct 11852989  T
Q  187 tt 188  Q
    ||    
T  11852990 tt 11852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 12854596 - 12854496
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||||||||||| ||||||| |||| | |||||||||||||| |    |||||||||||| ||  |||| |||||||| ||||||||||    
T  12854596 tctggataagactccagcatcttactctccagctcc-atgtcaaactttcaccagttattcctccccaaacaaccatcactagaggtatatccttgcctc 12854498  T
Q  240 tc 241  Q
    ||    
T  12854497 tc 12854496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 12917104 - 12917031
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||| |||||||||   ||| | |||||||||||||||||||| ||||||||||| || |||||||||    
T  12917104 caattattcaaataaattatattaaaaggcactaaactcgataaaataaataaataataaaatatggcgttaca 12917031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 11304578 - 11304411
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| |  |||||||| |||||| ||||||| ||||||| |    
T  11304578 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaatcaaacagctctggataagactcccgcatcttactctccagc 11304480  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| ||||  |   |||| |||||||| || || || |||||||| ||||||||||||    
T  11304479 tcccaagtcaaactctcactagttactccaccccaaacaaccttaactagaggtatatccttgcctctc 11304411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 3160426 - 3160355
Alignment:
Q  14 ttattcacataaattattc-aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| | |||| | |||||||||||||||||||| ||||||||||| | ||||||||||    
T  3160426 ttattcaaataaattataccaaaaaggcactaaactcgataaaataaataaataataaaattgggcgttaca 3160355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 13323388 - 13323290
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||| ||  ||||||| ||||||| || | | ||||||||||||   | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  13323388 ggatacgattcttgcatcttactctccagcttccaagtcaaactttcagtagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 13323290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 16381663 - 16381569
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| || ||| ||||||| || |||| |||| | ||||| |||||||| | |||||| |||||||||||| ||||||| ||||| ||||||||    
T  16381663 ggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccgccccaaacgactctcacaaggggtatttccttgcc 16381569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 1981719 - 1981639
Alignment:
Q  42 ctaaactcgataaaataactaaataat-aaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||||||| |||||| ||| |||| |||   ||||||||||| ||||||| ||||| || ||||||||||||||||||    
T  1981719 ctaaactcgattaaataattaattaattaaaagtgggcgttacaactctccccaacttaaaagattttcgtcctcgaaaat 1981639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 11260158 - 11260202
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11260158 ctaaactcaataaaataaataaatattaaattagggcgttacaat 11260202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 15953773 - 15953606
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    |||||| |||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||| | |    
T  15953773 tagggcattacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactcaggataagactcccgcatcttactctctagc 15953675  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||| |||   |||| ||| |||| || ||||| |||||||| ||||||||||||    
T  15953674 tcccaagtcaaactttcatcggttactccaccctaaacaaccttcactagaggtatatccttgcctctc 15953606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 5216192 - 5216235
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  5216192 ctaaactcaataaaataaataaataataaaatagggcgttacaa 5216235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 15446569 - 15446490
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    |||||||| | ||||||| |||||||| ||  |||||||||||| |||||||| |||| |  ||||||||||| ||||||    
T  15446569 ctaaactctagaaaataagtaaataattaaagagggcgttacaactctcccccgcttatagaattttcgtccttgaaaat 15446490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 35064407 - 35064364
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  35064407 ctaaactcaataaaataaataaataataaaatagggcgttacaa 35064364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 17050271 - 17050313
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  17050271 ctaaactcaataaaataaataaataataaaatagggcgttaca 17050313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 17533273 - 17533231
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  17533273 taaactcaataaaataaataaataataaaatagggcgttacaa 17533231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 40808558 - 40808600
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  40808558 taaactcaataaaataaataaataataaaatagggcgttacaa 40808600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 52311964 - 52311922
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  52311964 ctaaactcaataaaataaataaataataaaatagggcgttaca 52311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 13938034 - 13937957
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||||  ||||||||  ||||||| ||  |||||||||||| |||||||| |||| || | ||||||||||||||    
T  13938034 ctaaactcattaaaataatcaaataattaaagagggcgttacaactctcccccccttaaaagaatttcgtcctcgaaa 13937957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 15009057 - 15008991
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||  |||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  15009057 aaaataattaaataa--aattggggcgttacaactctccccaacttaaagaattttcgtcctcgaaaat 15008991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 16413000 - 16412931
Alignment:
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| |||| ||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16413000 ctcccacgtcaagctttaaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 16412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 17690434 - 17690369
Alignment:
Q  54 aaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||| |||||| |||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  17690434 aaataaataaatattaaaatagggcgttacaactctaccccccttaaaagaatttcgtcctcgaaa 17690369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 19444958 - 19445024
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||  |||| ||||||||||| ||||||| ||||| |  ||||||||||||||||||    
T  19444958 aaaataattaaataa--aattggggcgttacaactctccccaacttaaagaattttcgtcctcgaaaat 19445024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 21845323 - 21845262
Alignment:
Q  23 taaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||||  |||| ||| |||||||  ||||||||| ||||||||||| ||||||||||||    
T  21845323 taaattataaaaaaagactctaaacttaataaaataaataaataataaaatagggcgttaca 21845262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 54330216 - 54330171
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| ||||||||||| |||| ||||||||||    
T  54330216 ctaaactcaataaaataaataaataataaaataggacgttacaatt 54330171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 241
Target Start/End: Complemental strand, 38800 - 38610
Alignment:
Q  52 taaaataactaaataa-taaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    |||||||| ||||||| |||| ||||||||||||| |||||| |||| |||||||||| ||||||||||||||| |||||| ||| || |||||||||||    
T  38800 taaaataaataaataaataaaatagggcgttacaactctcccacactaagaatattttagtcctcgaaaatgtacctcattcaaacaactctggatacga 38701  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
     ||||||||||| || ||||| ||| | |||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38700 ttccagcatcttactttccaattcccatgtcaaactttcaccagccgctccttcccaaacaactttcacaagaggtatctccttgcctctc 38610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 43464 - 43293
Alignment:
Q  66 aataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgct 165  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||| ||| || ||||||||||| ||||||||||| ||    
T  43464 aataaaatagggcgttacaactctcccccacttagaatatttttgtcctcgaatatgtacctcattcaaacaactctggatacgattccagcatcttact 43365  T
Q  166 ctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
     ||||| ||| ||||||||||||||||  ||||| || || |||||||||||||||||||||||||||||||    
T  43364 ttccaattcccacgtcaaactttcaccaaccgcttcttccaaaacgactttcacaagaggtatctccttgcc 43293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 23948618 - 23948817
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| |||||||||  ||||||| || ||||||||||||| ||||||| ||||| |  ||||||||||||||||||||| ||||   ||| || |     
T  23948618 ctaaactcaataaaataatcaaataattaaatagggcgttacaactctccccaacttatagaattttcgtcctcgaaaatgtacctcaagaaaacaactt 23948717  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| ||||||| |||||| || ||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23948718 tggataagactccaacatcttactttccaactccgacgttaaactttcaccagccgctccttcccaaacgactttcacaagaggtatctccttgcctctc 23948817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 20397177 - 20396978
Alignment:
Q  42 ctaaactcgataaaataactaaata-ataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    |||||| | ||||||||| |||||| |||||| |||| ||||||| ||||||| ||||| || ||||||||||||||||||||| |||||  ||| || |    
T  20397177 ctaaacccaataaaataattaaatagataaat-agggtgttacaactctccccaacttataaaattttcgtcctcgaaaatgtacctcatgcaaaaaact 20397079  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||||| ||||||| |||||| || ||||||||| |||| || |||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||    
T  20397078 ctggataagactccatcatcttactttccaactcccacgttaacctttcaccagtcgctcctccctaaacgaccttcacaagaggtatctccttgcctct 20396979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 19900306 - 19900472
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||||   ||  || |||||||| |||||||||||||| ||||| | |||    
T  19900306 gggcgttacaactctccccaacttataatattttcgtcctcgaaaatttacctcaagcaagcaactctggataagactccagcatcttactctctagctc 19900405  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  19900406 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctccttgcctctc 19900472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 21250704 - 21250870
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| || || | |||    
T  21250704 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactttctagctc 21250803  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  21250804 ccacgtcaagctttcaccagccgctccgtcccaaacgactctcacaagaggtatctccttgcctctc 21250870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22708057 - 22707976
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgtta 82  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22708057 tcacacatcgcaattattcacataaattattcaaaatgacaataaactcgataaaataactaaataataaattagggcgtta 22707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 20018769 - 20018603
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  20018769 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 20018670  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  20018669 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 20018603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 22121226 - 22121028
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  22121226 ctaaactcgattaaataagcaattaacaaaagtgggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 22121127  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    |||||| |||||||||||||| ||||| | |||| ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||||||||||||    
T  22121126 tggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctct 22121028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 21167557 - 21167390
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || | |||||| |||||||||||||| ||||| | ||    
T  21167557 agggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactttggataagactccagcatcttactctcaagct 21167458  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || ||||||| |||||||| | ||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  21167457 cccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtatctccttgcctctc 21167390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 235
Target Start/End: Complemental strand, 22433299 - 22433118
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacgac 151  Q
    ||||||| ||||||| || |||||||||||||| ||||||| |||||||  |||| ||||||||||||| | | |||||  ||| || |||||||| |||    
T  22433299 aaaataattaaataacaa-ttagggcgttacaactctccccaacttagagaattt-cgtcctcgaaaatattacctcatgcaaacaactctggataagac 22433202  T
Q  152 tccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttg 235  Q
    |||| |||||| ||||||| |||| | |||||||||||||| | ||||||||||||| |||||||||| |||||||||||||||    
T  22433201 tccatcatcttactctccagctcccatgtcaaactttcaccagtcgctcctccccaagcgactttcactagaggtatctccttg 22433118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 17675042 - 17674876
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  17675042 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaattctggataagactccagcatcttactctcaagctc 17674943  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||  | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  17674942 ccacgtcaagctttcactagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 17674876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 22046136 - 22046302
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| ||||||||||| ||||| |||||||| ||||| | |||    
T  22046136 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaaatctggataagactcaagcatcttactctcaagctc 22046235  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  22046236 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 22046302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 22179577 - 22179411
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||||||||| |||||| || |||||  ||| || |||||||  || ||||||||||| ||||| | |||    
T  22179577 gggcgttacaactctccccaacttataagattttcgtcctagaaaatttacctcatgcaaacaactctggattagattccagcatcttactctctagctc 22179478  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  22179477 ccacgttaagctttcaccagtcgctccttcccaaacgactttcacaagaggtatctcattgcctctc 22179411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 20387852 - 20388041
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccactta--gaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacg 149  Q
    ||||||| ||||||| ||| ||||||||||||| ||||||| |||||  |||| ||||||||||||||||| | | |||||  ||| || |||||||| |    
T  20387852 aaaataattaaataa-aaactagggcgttacaactctccccaacttaaagaat-ttttcgtcctcgaaaatattacctcatgcaaacaactctggataag 20387949  T
Q  150 actccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||||| |||||||  ||| | ||||||||||||||  |||||||||||||||||||||| ||  |||||||||| |||||||||    
T  20387950 actccagcatcttactctccagttcccatgtcaaactttcaccaaccgctcctccccaaacgacttttactggaggtatctcgttgcctctc 20388041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 19112452 - 19112618
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  19112452 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 19112551  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||| ||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  19112552 ccacgtcaagcttttaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 19112618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 21922754 - 21922588
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||| |||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||  | |||    
T  21922754 gggcgttacaactctccccaacttataagatttttgtcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctttagctc 21922655  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  21922654 ccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctccttgcctctc 21922588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 15440943 - 15441105
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| || || | |||    
T  15440943 gggcattacaactctcccccacttaaaatattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactttcaagctc 15441042  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| | ||||||||||||    
T  15441043 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaagggatatctccttgcc 15441105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 15533142 - 15533304
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| || || | |||    
T  15533142 gggcattacaactctcccccacttaaaatattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactttcaagctc 15533241  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| | ||||||||||||    
T  15533242 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaagggatatctccttgcc 15533304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 19485877 - 19485727
Alignment:
Q  87 tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaact 186  Q
    ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||||||||||||||||||||||| ||||| | |||| ||||||| ||    
T  19485877 tctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctcccacgtcaagct 19485778  T
Q  187 ttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||| | ||||||   |||||||||| |||| ||||||||||| |||||    
T  19485777 ttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 19485727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 19977729 - 19977895
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||||||| |||||| ||||| | |||    
T  19977729 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccaacatcttactctctagctc 19977828  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||  | ||||||   |||||||||  ||||||||||||||||||||||||||    
T  19977829 ccacgtcaagctttcactagtcgctccgttccaaacgaccctcacaagaggtatctccttgcctctc 19977895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 21394884 - 21394718
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||| |||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  21394884 gggcgttacaactctccccaacttataagatttttgtcctcgaaaatttacctaaagcaaacaactctggataagactccagcatcttactctctagctc 21394785  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||| |||||||||||| |||||||||    
T  21394784 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcagaagaggtatctctttgcctctc 21394718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 21789377 - 21789211
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||| |||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  21789377 gggcgttacaactctccccaacttataagatttttgtcctcgaaaatttacctaaagcaaacaactctggataagactccagcatcttactctctagctc 21789278  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||| |||||||||||| |||||||||    
T  21789277 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcagaagaggtatctctttgcctctc 21789211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 32599906 - 32600072
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   |||||| |||||||| |||||||||||||| ||||| | |||    
T  32599906 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaataactctggataagactccagcatcttactctcaagctc 32600005  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||  ||||||||| | | ||||| | ||||| ||||||||||    
T  32600006 ccacgttaagctttcaccagtcgctccagcccaaacgaatctaacaagggatatctacttgcctctc 32600072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 16409098 - 16408898
Alignment:
Q  42 ctaaactcgataaaataactaaataa-taaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    ||||||||||| |||||| ||| ||| ||||   ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |    
T  16409098 ctaaactcgattaaataattaattaaataaaagtgggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaact 16408999  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||||| ||||| |||||||| ||||| | |||| ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||| || ||||||||    
T  16408998 ctggataagactcgagcatcttactctctagctcccacgtcaagctttcaccagtcgctccgtcccaaacgactctaacaaggggtatttctttgcctct 16408899  T
Q  241 c 241  Q
    |    
T  16408898 c 16408898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 12304588 - 12304686
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| |||||||| || ||||||||| ||||||||||||||||||| ||||||    
T  12304588 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagccgctccacctcaaacgactctcacaagaggtatctccttacctctc 12304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 14564878 - 14565067
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    ||||||||| |||||||  || ||||||||||||| ||||||| | ||| |  |||| |||||||||||   || ||||   ||| || || ||||||||    
T  14564878 ataaaataattaaataaataactagggcgttacaactctccccaaattacagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacga 14564976  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  14564977 ctcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 14565067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 16265569 - 16265471
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  16265569 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctccttacctctc 16265471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 22031794 - 22031960
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||| | ||||| || |||||||||||||| ||| || ||||   ||| || |||||||| ||||| |||||||| ||||| | |||    
T  22031794 gggcgttacaactctccgcaacttaaaagattttcgtcctcgataatttacctcaagcaaacaactctggataagactcaagcatcttactctcaagctc 22031893  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  22031894 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 22031960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 27347053 - 27347151
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  27347053 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctccttacctctc 27347151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 30314163 - 30313997
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| ||||||| |||||| ||||| | |||    
T  30314163 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccaacatcttactctcaagctc 30314064  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
      ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||||||    
T  30314063 tcacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatttccttgcctctc 30313997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 804627 - 804529
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  804627 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctcccccccaaacgactctcacaagaggtatctctttacctctc 804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 6603485 - 6603583
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||| | ||||||| |||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  6603485 ggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatctctttacctctc 6603583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 6678938 - 6679036
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  6678938 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 6679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 22134060 - 22133894
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||| ||| |||| ||||||||| ||||| |  ||    
T  22134060 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctgtataagactacagcatcttactctcaagttc 22133961  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  || |||||||||| ||||| | |||||| |||||||||    
T  22133960 ccacgtcaagctttcaccagtcgctccagcctaaacgactttaacaagggatatctctttgcctctc 22133894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 21678548 - 21678444
Alignment:
Q  14 ttattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcc 113  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||| || | |||| || | ||||||||    
T  21678548 ttattcaaataaattatacaaaaagacactaaactcgataaaataa-taaataataaaatagggcgttacaactctacctcccttaaaagaatttcgtcc 21678450  T
Q  114 tcgaaa 119  Q
    ||||||    
T  21678449 tcgaaa 21678444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 12912922 - 12912834
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||    
T  12912922 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctc 12912834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 20007611 - 20007777
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||| ||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  20007611 tagggtgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggatacgactcctgcatcttactctccagc 20007709  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| |||||||||||    
T  20007710 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctct 20007777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 28982184 - 28982282
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||| || || ||||||    
T  28982184 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatttctttacctctc 28982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 28987404 - 28987502
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||| || || ||||||    
T  28987404 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatttctttacctctc 28987502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 3274243 - 3274330
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctca 129  Q
    |||||||| ||||||||| |||||||| ||  |||||||||||| ||||||||||||| |  ||||||||||||||||||||| ||||    
T  3274243 ctaaactctataaaataattaaataattaaagagggcgttacaactctcccccacttatagaattttcgtcctcgaaaatgtacctca 3274330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 22165198 - 22165071
Alignment:
Q  87 tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaact 186  Q
    ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| ||||||| ||    
T  22165198 tctccccgacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagct 22165099  T
Q  187 ttcaccggccgctcctccccaaacgact 214  Q
    |||||| | ||||||  |||||||||||    
T  22165098 ttcaccagtcgctccaacccaaacgact 22165071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 23884492 - 23884575
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctccccc 94  Q
    |||||||||| |||||||||  |||| ||||||||||| |||||||||| ||||||||||| ||||||||||||| ||| ||||    
T  23884492 caattattcaaataaattatataaaaagacactaaactagataaaataattaaataataaaatagggcgttacaactctacccc 23884575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 22179011 - 22179108
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||| ||||| ||||||||    
T  22179011 tctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcacaaggggtatttccttgcc 22179108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 21325430 - 21325263
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| ||||| |  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| |||||||      
T  21325430 tagggcgttacaactctccccaacttatagaattt-cgtcctcgaaatcttacctcaaacaaacaactctggatacgactcccgcatcttactctccagt 21325332  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  21325331 tcccaagtcaaactttcacccgttactccaccccaaacaaccttcactagaggtatatccttgcctctc 21325263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 20010920 - 20010754
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  | || |||||||||||   || ||||   ||| || |||||||| |||||||||||||| ||||||| |    
T  20010920 tagggcgttacaactctccccaacttagagaactt-cgtcctcgaaatattacctcaagcaaacaactctggataagactccagcatcttactctccagc 20010822  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | |||||||||||||| |   |||||||| |||| || || || |||||||| |||||||||||    
T  20010821 tcccaagtcaaactttcaccagttactcctcccaaaaccacctttactagaggtatatccttgcctct 20010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 21676202 - 21676133
Alignment:
Q  14 ttattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  21676202 ttattcatataaattatacaaaaagacactaaacttgataaaataa-taaataataaaatagggcgttaca 21676133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 29304377 - 29304283
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||||||| ||||||| |||||||  ||| | |||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  29304377 ggatacgactcccgcatcttactctccagttcccaagtcaaactttcaccagtcgctccatcccaaacgactctcacaaggggtatttccttgcc 29304283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 19851238 - 19851339
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||| | ||||||| |||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||    
T  19851238 tctggataagactcccgcatcgtactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctc 19851337  T
Q  240 tc 241  Q
    ||    
T  19851338 tc 19851339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 19857274 - 19857375
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||| | ||||||| |||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||    
T  19857274 tctggataagactcccgcatcgtactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctc 19857373  T
Q  240 tc 241  Q
    ||    
T  19857374 tc 19857375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 20516725 - 20516644
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| | |||||||| |||||||||   ||| || ||||||||||||||||||| ||||||||||| ||||||||||||    
T  20516725 acacatccccattattcaaataaattatattaaaagatactaaactcgataaaataaataaataataaaatagggcgttaca 20516644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 23649846 - 23649969
Alignment:
Q  77 gcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcct 176  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | ||||     
T  23649846 gcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccagcatcttactctctagctccc 23649945  T
Q  177 acgtcaaactttcaccggccgctc 200  Q
    |||| ||  ||||||||| |||||    
T  23649946 acgttaagatttcaccggtcgctc 23649969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 31417428 - 31417327
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||| ||||||||| ||||||| ||||| | |||| | |||||||| ||||| |   |||| |||||||| |||||||| |||||||| ||||||||||    
T  31417428 tctgggtacgactcccgcatcttactctctagctcccaagtcaaactctcaccagttactccaccccaaacaactttcactagaggtatgtccttgcctc 31417329  T
Q  240 tc 241  Q
    ||    
T  31417328 tc 31417327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22987073 - 22987129
Alignment:
Q  185 ctttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||| | ||||||  |||||||||||||||||||||||||||| |||||||||    
T  22987073 ctttcaccagtcgctccgtcccaaacgactttcacaagaggtatctctttgcctctc 22987129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 22062320 - 22062249
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggta 227  Q
    ||||||| ||||||| |||| | |||||||||||||| | ||||||  ||||||||||||||||||| ||||    
T  22062320 gcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactttcacaaggggta 22062249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 22984909 - 22985036
Alignment:
Q  41 actaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    ||||||||| | ||||||| |||||||| ||  ||||| |||||| ||||||| ||||| || ||||||||| || ||||| || ||||   ||| ||      
T  22984909 actaaactcaacaaaataattaaataatcaaagagggcattacaactctccccaacttataagattttcgtcgtcaaaaatttacctcaagcaaacaaca 22985008  T
Q  141 ctggatacgactccagcatcttgctctc 168  Q
    ||||||| |||||||||||||| |||||    
T  22985009 ctggataagactccagcatcttactctc 22985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 23654757 - 23654855
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||| ||||||| ||||||| |||| | |||||||||||| | |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  23654757 ggataagactcccgcatcttactctccagctcccaagtcaaactttcatcagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 23654855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 31721991 - 31721937
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccac 96  Q
    |||||||| ||||||||| ||||||||||| |||||||||||| ||| |||||||    
T  31721991 ctaaactcaataaaataaataaataataaaatagggcgttacagttcgcccccac 31721937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 20458352 - 20458425
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctc 115  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||| ||| |||| |||| || | ||||||||||    
T  20458352 ctaaactcaataaaataagtaaatattaaaatagggcgttacaactctacccctcttaaaagaatttcgtcctc 20458425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 5081751 - 5081708
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  5081751 ctaaactcaataaaataaataaataataaaatagggcgttacaa 5081708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 22208724 - 22208767
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  22208724 ctaaactcaataaaataaataaataataaaatagggcgttacaa 22208767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 22485033 - 22485076
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  22485033 taaactcaataaaataaataaataataaaatagggcgttacaat 22485076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 22257874 - 22257832
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  22257874 ctaaactcaataaaataaataaataataaaatagggcgttaca 22257832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 22345509 - 22345563
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||| ||| |||||||  ||||||||| ||||||||||| |||||||||||||||    
T  22345509 aaaaagactctaaacttaataaaataaataaataataaaatagggcgttacaatt 22345563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 22357169 - 22357223
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||| ||| |||||||  ||||||||| ||||||||||| |||||||||||||||    
T  22357169 aaaaagactctaaacttaataaaataaataaataataaaatagggcgttacaatt 22357223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 36731220 - 36731178
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  36731220 ctaaactcaataaaataaataaataataaaatagggcgttaca 36731178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 21400307 - 21400352
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||  ||||||||| ||||||||||| |||||||||||||||    
T  21400307 ctaaacttaataaaataaataaataataaaatagggcgttacaatt 21400352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 21794800 - 21794845
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||  ||||||||| ||||||||||| |||||||||||||||    
T  21794800 ctaaacttaataaaataaataaataataaaatagggcgttacaatt 21794845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 5762285 - 5762325
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgtta 82  Q
    |||||||| ||||||||| ||||||||||| ||||||||||    
T  5762285 ctaaactcaataaaataaataaataataaaatagggcgtta 5762325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 111724 - 111914
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacga 150  Q
    |||||||||  |||||||| ||||| ||||||||| ||| ||| ||||| |  |||||||||||  |||||||| |||||  ||| || |||||||| ||    
T  111724 ataaaataatcaaataatacattagcgcgttacaactcttcccaacttatagaattttcgtcctaaaaaatgtacctcatgcaaacaactctggataaga 111823  T
Q  151 ctccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| || ||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  111824 ctccagcatcttactttccaactcccacgttaaactttcaccagccgctccttcccaaacgactttcacaagaggtatctccttgcctctc 111914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 204048 - 203881
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||| ||||||| ||||||| |||||  | |||||||||||||||||  || |||| | ||| || |||||||| |||||||||||||| |||||||||    
T  204048 tagggtgttacaactctccccaacttaaga-attttcgtcctcgaaaacatacctcaatcaaacaactctggataagactccagcatcttactctccaac 203950  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||||||| ||||| |  |||||||||||||| |||||||| |||||||||||||||||||||    
T  203949 tcccacgtcaaactctcaccagttgctcctccccaaacaactttcactagaggtatctccttgcctctc 203881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 117296 - 117463
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || |||||||| |||||| ||||||| ||||||| |    
T  117296 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggataagactcccgcatcttactctccagc 117394  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||     |||| |||||||| || ||||| |||||||| ||||||||||||    
T  117395 tcccaagtcaaactctcaccaattactccaccccaaacaaccttcactagaggtatatccttgcctctc 117463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 385545 - 385712
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| | |||||||||   |||||||   ||| || |||||||| |||||||||||||| ||||||| |    
T  385545 tagggcgttacaactctccccaacttagagaattt-catcctcgaaatattatctcaagcaaacaactctggataagactccagcatcttactctccagc 385643  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||  |   | |||||| |||| || ||||| |||||||| ||||||||||||    
T  385644 tcccatgtcaaactttcactagttacacctccctaaacaaccttcactagaggtatatccttgcctctc 385712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 73435 - 73521
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||| ||| |||||||| | ||||||| ||||||||||| ||||||||||||| ||||||||||||| || | ||||||||| ||||    
T  73435 aaaaagactctaaactcaagaaaataaataaataataaaatagggcgttacaactctcccccacttaaaagaatttcgtccttgaaa 73521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 319422 - 319346
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| || |||||||||| ||| |||| |||| || | ||| ||||||||||    
T  319422 ctaaactcaataaaataaataaataataaaataaggcgttacaactctacccc-cttaaaagaattttgtcctcgaaa 319346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 874 - 673
Alignment:
Q  42 ctaaactcgataaaataact-aaataataaattagggcgttacaattctcccccacttagaata-ttttcgtcctcgaaaatgtatctcattgaaataaa 139  Q
    |||||||| ||||||||| | ||||||| || ||||||||||||| ||||||| ||||| || | |||||||||||||||||||| ||| |  ||| ||     
T  874 ctaaactcaataaaataaatcaaataattaaatagggcgttacaactctccccaacttacaaaaattttcgtcctcgaaaatgtacctcgtgcaaacaac 775  T
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||||||||||| |||||||||| | |||| || |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  774 tctggataagactccagcatcttactctccaacttccacgttaagctttcaccagccgctccttcccaaacgactttcacaagaggtatctcgttgcctc 675  T
Q  240 tc 241  Q
    ||    
T  674 tc 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 29020 - 29157
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcg 110  Q
    |||||||||| ||||||||| ||||| |||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  29020 caattattcaaataaattatacaaaaagacactaaacttaataaaataaataaataataaaatagggcgttacaactctcccccacttagaatattttcg 29119  T
Q  111 tcctcgaaaatgtatctcattgaaataaatctggatac 148  Q
    |||||||||||||| |||||| |||||| |||||||||    
T  29120 tcctcgaaaatgtacctcattaaaataactctggatac 29157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1832 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1832
Description:

Target: scaffold1832; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 1002 - 1190
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| |||||||  || ||||||||||||| ||||||| ||||| || ||||||||||||||||||||| |||||  ||| || |||||||| ||||    
T  1002 aaaataattaaataaataaatagggcgttacaagtctccccaacttataaaattttcgtcctcgaaaatgtacctcatgcaaacaactctggataagact 1101  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||||| | || |||| |||| |||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  1102 ctagcatcctactttccagctcccacgttaaactttcaccagtcgctcctccccaaacgaccttcacaagaggtatctccttgcctctc 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 19167549 - 19167350
Alignment:
Q  42 ctaaactcgataaaataactaaata-ataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    |||||| | ||||||||| |||||| |||||| |||| ||||||| ||||||| ||||| || ||| ||||||||||||||||| |||||  ||  || |    
T  19167549 ctaaacccaataaaataattaaatagataaat-agggtgttacaactctccccaacttataaaattgtcgtcctcgaaaatgtacctcatgcaatcaact 19167451  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||||| |||||||||||||| || ||||||||| |||| ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  19167450 ctggataagactccagcatcttactttccaactcccacgttaaactttcaccagtcgctcctccccaaacgattttcacaagaggtatctccttgcctct 19167351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3006607 - 3006524
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  3006607 tcacacatcgcaattattcacataaattattcaaaatgacactaaactccataaaataactaaataataaattagggtgttaca 3006524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 2875524 - 2875358
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  2875524 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 2875425  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  2875424 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 2875358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 24313889 - 24313723
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  24313889 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 24313790  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  24313789 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 24313723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 241
Target Start/End: Complemental strand, 16550879 - 16550716
Alignment:
Q  78 cgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactccta 177  Q
    |||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| |    
T  16550879 cgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctccca 16550780  T
Q  178 cgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16550779 cgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 16550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 241
Target Start/End: Complemental strand, 16627435 - 16627272
Alignment:
Q  78 cgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactccta 177  Q
    |||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| |    
T  16627435 cgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctccca 16627336  T
Q  178 cgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16627335 cgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 16627272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 23078007 - 23078185
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| |||||||| ||  |||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || || ||||| || |    
T  23078007 aaaataattaaataatcaaagagggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactcaggataagatt 23078106  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    |||||||||| |||||||||||| |||| || |||||||| | ||||||  |  |||||||||||||||||||||||||    
T  23078107 ccagcatcttactctccaactcccacgttaagctttcaccagtcgctccgtcttaaacgactttcacaagaggtatctc 23078185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 29592641 - 29592475
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  29592641 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 29592542  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  29592541 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 29592475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 25610581 - 25610416
Alignment:
Q  76 ggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcc 175  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||| || |||    ||| || |||||||| ||||| |||||||| ||||| | ||||    
T  25610581 ggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcgagcaaacaactctggataagactctagcatcttactctctagctcc 25610482  T
Q  176 tacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
     |||| || |||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  25610481 cacgttaagctttcaccagccgctccttcccaaacgactctcacaagaggcatctccttgcctctc 25610416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 27332155 - 27331991
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||  ||||| || |||||| ||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  27332155 agggcgttacaactctcccatacttataagattttcatcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagct 27332056  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcct 238  Q
    || |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||||||||||    
T  27332055 cccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctccttgcct 27331991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 27392895 - 27392731
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||  ||||| || |||||| ||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  27392895 agggcgttacaactctcccatacttataagattttcatcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagct 27392796  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcct 238  Q
    || |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||||||||||    
T  27392795 cccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctccttgcct 27392731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 1543805 - 1543639
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| |  |||||||| |||||||||||||| ||||| | |||    
T  1543805 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctc 1543706  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  1543705 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 1543639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 1640353 - 1640521
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacgactccagcatcttgctctccaa 171  Q
    ||||||||||||| ||||||| ||| | |  |||||||||||||||||| | | || ||  ||| || |||||||| |||||||||||||| |||||||     
T  1640353 tagggcgttacaactctccccaactcaaagaattttcgtcctcgaaaatattaccttatgcaaacaactctggataagactccagcatcttactctccag 1640452  T
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
     ||| | |||||||||||||| | ||||||||||||||||| ||| || ||||||||||||||||||||    
T  1640453 ttcccatgtcaaactttcaccagtcgctcctccccaaacgaattttactagaggtatctccttgcctct 1640521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 28949118 - 28949317
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||| | |||| |||| |||||||| || || | |||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || ||    
T  28949118 ctaaacccaataatataattaaataattaaatatgacgttacaactctccccaacttataaaattttcgtcctcgaaaatatacctcatgcaaacaactc 28949217  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || ||| ||||| |||||||| || ||   |||  |||| ||||||||||||  |||||||| ||||||||| |||||||||| ||||||||||||||||    
T  28949218 tgaataagactctagcatcttactttctcgctctcacgttaaactttcaccgatcgctcctctccaaacgaccttcacaagagatatctccttgcctctc 28949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 16964088 - 16963926
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16964088 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16963989  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||    
T  16963988 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatttccttgcc 16963926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 17032122 - 17032288
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||||||||||| ||||| | |||    
T  17032122 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccagcatcttactctcaagctc 17032221  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||  | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  17032222 ccacgttaagctttcacaagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 17032288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27186996 - 27187162
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||||||||||||||||||||||| ||||| | |||    
T  27186996 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggatacgactccagcatcttactctcaagctc 27187095  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| ||||| || | ||||||   |||||||||| |||| |||||||| || |||||||||    
T  27187096 ccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatatctttgcctctc 27187162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 27262244 - 27262078
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||||||||||||||||||||||| ||||| | |||    
T  27262244 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggatacgactccagcatcttactctcaagctc 27262145  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| ||||| || | ||||||   |||||||||| |||| |||||||| || |||||||||    
T  27262144 ccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatatctttgcctctc 27262078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 28263918 - 28263756
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||||||||||||||||||||||| ||||| | |||    
T  28263918 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggatacgactccagcatcttactctcaagctc 28263819  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| ||||| || | ||||||   |||||||||| |||| ||||||||||| |||||    
T  28263818 ccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 28263756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 28342667 - 28342505
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || ||||||||||||||||||||||| ||||| | |||    
T  28342667 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggatacgactccagcatcttactctcaagctc 28342568  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| ||||| || | ||||||   |||||||||| |||| ||||||||||| |||||    
T  28342567 ccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 28342505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 22433535 - 22433723
Alignment:
Q  54 aaataactaaataat-aaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||||||||||| |||   |||| |||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || | |||||| ||||    
T  22433535 aaataactaaataattaaaagtgggccttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactatggataagact 22433634  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||| ||||| | |||| ||||||| |||||||| | | ||||  ||||||||||| | ||||||||||||||||||||||||    
T  22433635 ccaacatcttactctctagctcccacgtcaagctttcaccagtctctccgtcccaaacgactcttacaagaggtatctccttgcctctc 22433723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 12497586 - 12497752
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||    
T  12497586 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctc 12497685  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || ||||||||   ||||||  ||||||||||| | ||||| ||||| ||||||||||||    
T  12497686 ccacgttaagctttcaccaatcgctccagcccaaacgactctaacaaggggtatttccttgcctctc 12497752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 19864274 - 19864400
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  19864274 gggcgttacaattctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctc 19864373  T
Q  175 ctacgtcaaactttcaccggccgctcc 201  Q
    | ||||||| |||||||| | ||||||    
T  19864374 ccacgtcaagctttcaccagtcgctcc 19864400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 21833702 - 21833536
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||| ||| || ||||   ||| || |||||||| |||||||||||||| ||||| | ||     
T  21833702 gggcgttacaactctccccaacttaaaagattttcgtcctcgacaatttacctcaagcaaacaactctggataagactccagcatcttactctctagctt 21833603  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||||||    
T  21833602 ccacgtcaagctttcaccagtcgctccatcccaaacgactctaacaaggggtatttccttgcctctc 21833536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 25112112 - 25112278
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||| | ||||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||| | |||||||| ||||| | |||    
T  25112112 gggcgttacaactcttctccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagacactagcatcttactctcaagctc 25112211  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  25112212 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 25112278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 8766870 - 8766703
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  8766870 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaagcaaacaactctggatacgactcccgcatcttactctccagc 8766772  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  8766771 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcaccagaggtatatccttgcctctc 8766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 24364030 - 24364138
Alignment:
Q  133 aaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctcc 232  Q
    |||||| || |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||     
T  24364030 aaataactccggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctct 24364129  T
Q  233 ttgcctctc 241  Q
    || ||||||    
T  24364130 ttacctctc 24364138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 17026027 - 17025861
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| | |||||||||   || ||||   ||| || |||||||| |||||||||||||| |||||||||    
T  17026027 tagggcgttacaactctccccaacttagagaattt-catcctcgaaatattacctcaagcaaacaactctggataagactccagcatcttactctccaac 17025929  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| |||||||||||    
T  17025928 tcccaagtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctct 17025861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 16928361 - 16928195
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||| ||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  16928361 gggcgttacaactctccccaacttataagattttcttcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 16928262  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | | ||||  ||||||||||| | ||||| ||||| | ||||||||||    
T  16928261 ccacgtcaagctttcaccagtcactccagcccaaacgactctaacaaggggtattttcttgcctctc 16928195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 18408664 - 18408498
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||  ||||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||||||||||| | ||| | |||    
T  18408664 gggcgttacaactctccctaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccagcatcttacactctagctc 18408565  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | | ||||  ||||||||||| |||||||||||||| |||||||||||    
T  18408564 ccacgttaagctttcaccagtcactccgtcccaaacgactctcacaagaggtatcgccttgcctctc 18408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 18459588 - 18459669
Alignment:
Q  4 cacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  18459588 cacatcacaattattcaaataaattatacaaaaagacactaaactcgataaagtaaataaataataaaatagggcgttacaa 18459669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 21471160 - 21471327
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||| ||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || |||||||| |||||||||||||| ||||||| |    
T  21471160 tagggtgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggataagactccagcatcttactctccagc 21471258  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||||    
T  21471259 tcccatgtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctctc 21471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 18794315 - 18794406
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||||| ||||||| | ||||||| |||||||||||||| || ||||||||||| | |||||| |||||||||||| ||||||||||||||||    
T  18794315 tctgggtacgactgccgcatcttactctccaactcctaagttaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctc 18794406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 241
Target Start/End: Complemental strand, 12511303 - 12511149
Alignment:
Q  87 tctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaact 186  Q
    ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||| |||| || ||    
T  12511303 tctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccacgttaagct 12511204  T
Q  187 ttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||   ||||||  ||||||||||| | ||||| ||||| ||||||||||||    
T  12511203 ttcaccaatcgctccagcccaaacgactctaacaaggggtatttccttgcctctc 12511149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 1816849 - 1816965
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaa 102  Q
    ||||||| | |||||| | ||||||||| ||||| |||||||||||||||||||||| ||||||||||| || |||||||||| ||| || | |||| ||    
T  1816849 acacatccccattattaaaataaattatacaaaaagacactaaactcgataaaataaataaataataaaataaggcgttacaactctacctcccttaaaa 1816948  T
Q  103 tattttcgtcctcgaaa 119  Q
     | ||| ||||||||||    
T  1816949 gaattttgtcctcgaaa 1816965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 18787447 - 18787613
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   |||||| ||||||||||||||| ||||||| || || | |    
T  18787447 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaaacaaataactctggatacgactcccgcatcttactttctagc 18787545  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | ||||||||| ||||||   |||| |||||||| || ||||| |||||||| |||||||||||    
T  18787546 tcccaagtcaaacttgcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctct 18787613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 18932372 - 18932479
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  18932372 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 18932471  T
Q  175 ctacgtca 182  Q
    | ||||||    
T  18932472 ccacgtca 18932479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 22079380 - 22079213
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||| || || ||  ||| || | |||||| || | ||  ||||| || || | ||    
T  22079380 agggcgttacaactctccccaacttataagattttcgtcctcgaaaatttaccttatgcaaacaactttggataagatttcaatatcttactttctagct 22079281  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  22079280 cccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctctttgcctctc 22079213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 21564788 - 21564687
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||||| || |||| |||| | |||||||||||||| | ||||||  ||||||||||| |||||||||||||||| || ||||    
T  21564788 tctggataagactcccgcatcttactttccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactctcacaagaggtatctctttacctc 21564689  T
Q  240 tc 241  Q
    ||    
T  21564688 tc 21564687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 28293028 - 28292931
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||||||||||||||||||||| ||||| | |||| ||||||| ||||| || | ||||||   |||||||||| |||| |||||||||||||||||    
T  28293028 tctggatacgactccagcatcttactctcaagctcccacgtcaagctttcgccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcc 28292931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 31166557 - 31166630
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||||||  |||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  31166557 caattattcaattaaattatacaaaaagacactaaactcgataaaataaataaataataaaatagggtgttaca 31166630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 11288320 - 11288153
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || || ||||||||  ||||||| |||||||||    
T  11288320 tagggcgttacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactcagggtacgactcttgcatcttactctccaac 11288222  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || | ||||||||| |  ||||| |||||||| ||| | ||||||||||||||||||||||||    
T  11288221 tcccaagttagactttcaccagttgctccaccccaaacaactcttacaagaggtatctccttgcctctc 11288153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 10469498 - 10469404
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | || ||| ||||| |||||| ||||||||||||||||||| ||||||    
T  10469498 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcg-tccaccccagacgactctcacaagaggtatctccttacctctc 10469404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 25750368 - 25750534
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  ||||| ||||||||||   || ||||   ||| || ||| ||||||||||||||||||| ||| ||| |    
T  25750368 tagggcgttacaactctccccaacttagagaatttt-gtcctcgaaatattacctcaagcaaacaactcttgatacgactccagcatcttactccccagc 25750466  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | |||||||||||||| |   ||||||| ||||  || ||||| |||||||| |||||||||||    
T  25750467 tcccaagtcaaactttcaccagttactcctcctcaaaaaaccttcactagaggtatatccttgcctct 25750534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 14131899 - 14131734
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||||   || ||||   ||| || |||||||| ||||||  |||||| || |||| |||    
T  14131899 gggcgttacaactctccccaacttagag-attttcgtcctcgaaatattacctcaagtaaacaactctggataagactcccacatcttactttccagctc 14131801  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | | |||| ||||||||| |   |||| |||||||| ||| |||| |||||||||||||||||||||    
T  14131800 ccaagtcagactttcaccagtttctccaccccaaacaactctcactagaggtatctccttgcctctc 14131734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 18198254 - 18198088
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||| ||| ||||| || ||||||||| || ||||| || |||    ||| || |||||||| ||| |||||||||| ||||| | |||    
T  18198254 gggcgttacaactctacccaacttataagattttcgtcttcaaaaatttacctcgcacaaacaactctggataagacaccagcatcttactctctagctc 18198155  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | || | || |||||||| | ||||||  ||||||| |||||||  |||||||||||||||||||||    
T  18198154 caacattaagctttcaccagtcgctccgtcccaaacaactttcattagaggtatctccttgcctctc 18198088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 5839863 - 5839774
Alignment:
Q  152 tccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||| ||||| | |||| ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  5839863 tccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 5839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 240
Target Start/End: Complemental strand, 22763175 - 22763011
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || | |||||| || | ||||||||| ||||| | |||    
T  22763175 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactatggataaga-ttcagcatcttactctctagctc 22763077  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    | || | || |||||||  | |||||   ||||||||||| |||||||||||||||| ||||||||    
T  22763076 ccacattaagctttcacaagtcgctctgtcccaaacgactctcacaagaggtatctctttgcctct 22763011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 25766005 - 25765844
Alignment:
Q  80 ttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacg 179  Q
    |||||| ||||||| ||||| || |||||||||||| ||| | || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||| ||     
T  25766005 ttacaactctccccaacttaaaagattttcgtcctcaaaagtttacctcaagcaaacaactctagataagactccagcatcttactctcaagctcccaca 25765906  T
Q  180 tcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | || |||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||||||    
T  25765905 taaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatttccttgcctctc 25765844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 20595044 - 20595138
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||||||||||| |||||    
T  20595044 agggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccagcatcttactctc 20595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 1537718 - 1537625
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| |  |||||||| |||||||||||||| |||||    
T  1537718 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacagctctggataggactccagcatcttactctc 1537625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 1819321 - 1819386
Alignment:
Q  13 attattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggc 78  Q
    |||||||| ||||||||| ||||| ||||||||||| ||||||| || ||||||||||| ||||||    
T  1819321 attattcaaataaattatacaaaaagacactaaacttgataaaacaaataaataataaaatagggc 1819386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 21681652 - 21681575
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||| ||| | || |||| || | ||||||||||||||    
T  21681652 ctaaactcaataaaataaataaataataaaatagggcgttacaactctactccccttaaaagaatttcgtcctcgaaa 21681575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 23018422 - 23018346
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  23018422 taaactcaataaaataaataaatattaaaatagggcgttacaactctaccccccttaaaagaatttcgtcctcgaaa 23018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 21676827 - 21676784
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  21676827 ctaaactcaataaaataaataaataataaattagggcgttacaa 21676784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 19878857 - 19879024
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||| ||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || || ||||||||  ||||||| |||||||||    
T  19878857 tagggcgatacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactcggggtacgactcttgcatcttactctccaac 19878955  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || | ||||||||| |  ||||| |||||||| ||| | |||||||||||||| || ||||||    
T  19878956 tcccaagttagactttcaccagttgctccaccccaaacaactcttacaagaggtatctctttacctctc 19879024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 23658568 - 23658612
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  23658568 ctaaactcaataaaataaataaataataaaatagggcgttacaat 23658612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 25959159 - 25959071
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcat 130  Q
    |||||||  ||||||||| |||||||| ||  |||||||||||| ||||||||  ||| |  |||||||||||||||||| || |||||    
T  25959159 ctaaacttaataaaataattaaataattaaagagggcgttacaactctcccccttttatagaattttcgtcctcgaaaatttacctcat 25959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 19650614 - 19650571
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  19650614 ctaaactcaataaaataaataaataataaaatagggcgttacaa 19650571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 10446489 - 10446551
Alignment:
Q  23 taaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||||  |||| ||| |||||||| ||||||||| ||||||||||| |||| ||||||||    
T  10446489 taaattataaaaaaagactctaaactcaataaaataaataaataataaaataggacgttacaa 10446551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 18659814 - 18659876
Alignment:
Q  62 aaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgta 124  Q
    ||||||| || ||| ||||||||| ||||||| ||||| |  |||||||||||||||||||||    
T  18659814 aaataattaaatagtgcgttacaactctccccaacttatagaattttcgtcctcgaaaatgta 18659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 20408800 - 20408758
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  20408800 ctaaactcaataaaataaataaataataaaatagggcgttaca 20408758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 15890172 - 15890131
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  15890172 taaactcaataaaataaataaataataaaatagggcgttaca 15890131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 19566304 - 19566252
Alignment:
Q  69 aaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||| ||| ||||||| ||||||||||||| |  ||||||||||||||||||    
T  19566304 aaattggggtgttacaactctcccccacttaaagaattttcgtcctcgaaaat 19566252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 15691 - 15492
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||| | ||||||||| |||||||| || |||||| |||||| |||| || ||||| |  ||||||||||||||||||||| |||||  ||| || ||    
T  15691 ctaaacccaataaaataattaaataattaaatagggcattacaactctctccaacttatagaattttcgtcctcgaaaatgtacctcatgcaaacaactc 15592  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| || ||||||||| |||| ||||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||    
T  15591 tggataagactccagcatcttactttccaactcccacgttaaactttcaccagttgctccttcccaaacgacttttacaagaggtatctccttgcctctc 15492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 117517 - 117318
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||| | ||||||||| |||||||  || ||||||||||||| ||||||| | ||| ||  |||| ||||||||||||||| |||||  ||| || ||    
T  117517 ctaaacccaataaaataattaaataaataaatagggcgttacaactctccccaatttataaactttttgtcctcgaaaatgtacctcatgcaaacaactc 117418  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| || |||||||| ||||| |||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||    
T  117417 tggataagactccagcatcttactttccaactcttacgttaaactttcaccaatcgctcctcctcaaacgactttcacaagaggtatctccttgcctctc 117318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 26331 - 26132
Alignment:
Q  42 ctaaactcgataaaataactaaata-ataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    |||||| | ||||||||| |||||| |||||| |||||||||||| ||||||| ||||| || ||||||||||||||||||||| |||||  ||| || |    
T  26331 ctaaacccaataaaataattaaatagataaat-agggcgttacaactctccccaacttataaaattttcgtcctcgaaaatgtacctcatgcaaacaact 26233  T
Q  141 ctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||||| ||||||| |||||| || ||||||||| | || ||||||||||| | | |||||||||||| ||| ||||||||||||||||||||| ||||    
T  26232 ctggataagactccaacatcttactttccaactcccatgttaaactttcaccagtccctcctccccaaatgaccttcacaagaggtatctccttgtctct 26133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 5e-40; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 165321 - 165122
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | |||||||  ||||||| ||  |||||||||||| ||||||| ||||| |  ||||||||||||||||||||| |||||  ||| || ||    
T  165321 ctaaactcaacaaaataatcaaataatcaaagagggcgttacaactctccccaacttatagaattttcgtcctcgaaaatgtacctcatgcaaacaactc 165222  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| ||||| | |||| || | || |||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  165221 tggataagactccagcatcttactctctagctcccacattaagctttcaccagccgctccttcccaaacgactttcacaagacgtatctctttgcctctc 165122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 308386 - 308552
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  308386 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 308485  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  308486 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 308552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 279329 - 279243
Alignment:
Q  155 agcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||| ||||| | |||| ||||||| |||||||| | ||||    ||||||||||||||||||| ||||| ||||||||||||    
T  279329 agcatcttactctcaagctcccacgtcaagctttcaccagtcgctttgtcccaaacgactttcacaaggggtatttccttgcctctc 279243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 260103 - 260197
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| || ||| ||||||| || |||| |||| | ||||| |||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  260103 ggatatgaatcccgcatcttactttccagctcccaagtcaagctttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 260197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 14651971 - 14652170
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | |||||||  ||||||| ||  |||||||||||| ||||||| ||||| |  ||||||||||||||||||||| |||||  ||| || ||    
T  14651971 ctaaactcaacaaaataatcaaataatcaaagagggcgttacaactctccccaacttatagaattttcgtcctcgaaaatgtacctcatgcaaacaactc 14652070  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| ||||| | |||| || | || |||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  14652071 tggataagactccagcatcttactctctagctcccacattaagctttcaccagccgctccttcccaaacgactttcacaagacgtatctctttgcctctc 14652170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 8386108 - 8386274
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  8386108 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 8386207  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  8386208 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 8386274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 14304293 - 14304127
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  14304293 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 14304194  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  14304193 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 14304127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 23955443 - 23955609
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  23955443 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 23955542  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  23955543 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 23955609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27711032 - 27711198
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  27711032 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctc 27711131  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  27711132 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 27711198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 8053939 - 8053773
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| |  ||    
T  8053939 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagttc 8053840  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  8053839 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 8053773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 15364082 - 15364248
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  15364082 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 15364181  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| ||||  ||||||||||||||||||||    
T  15364182 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgtgaggtatctccttgcctctc 15364248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 18296901 - 18297067
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  18296901 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 18297000  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  18297001 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 18297067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 19779109 - 19778943
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  19779109 gggcgttacaactctcccccacttaaaagattttcatcctcgaaaatttacctcaagtaaacaactctggataagactccagcatcttactctcaagctc 19779010  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  19779009 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 19778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 29039720 - 29039554
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  29039720 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 29039621  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  29039620 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 29039554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 40472736 - 40472902
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| ||||||||||| || ||||| | |||    
T  40472736 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcattttactctcaagctc 40472835  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  40472836 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 40472902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 14851704 - 14851516
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| || ||||| ||||||| ||||||  |||||    |||||||||||||||||| || |||||  ||| || |||||||| ||||    
T  14851704 aaaataatcaaataattaaatagggtgttacaactctcccgaacttattgaattttcgtcctcgaaaatttacctcatgcaaacaactctggataagact 14851605  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||| ||||| || ||| |||| |  |||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||    
T  14851604 ccagcatcttactctctaattcccacgttaggctttcaccagccgctccgtcccaaacgactttcacaagaggtatctctttgcctctc 14851516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 15415576 - 15415390
Alignment:
Q  52 taaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgac 151  Q
    |||||||| ||||||| |||| |||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || | |||||| |||    
T  15415576 taaaataattaaataacaaat-agggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactttggataagac 15415479  T
Q  152 tccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||||||||| ||||||| |||| | |||||||||||||| |  |||||||||||||| |||||||| ||||||||||||||||||||    
T  15415478 tccagcatcttactctccagctcccatgtcaaactttcaccagatgctcctccccaaacaactttcactagaggtatctccttgcctct 15415390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 14927576 - 14927409
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || ||||||||||||| |||| || |||||  ||| || |||||||| || || |||||||| ||||| | ||    
T  14927576 agggcgttacaactctccccaacttataagattttcgtcctcggaaatttacctcatgcaaacaactctggataagattctagcatcttactctctagct 14927477  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  14927476 cccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctctttgcctctc 14927409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 12476296 - 12476462
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| |||||| ||||||||||||| || |||||||||||| ||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  12476296 gggcattacaactctcccccacttaaaagattttcgtcctcaaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 12476395  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  12476396 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 12476462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 12523372 - 12523538
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||||||| || ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||| |||| |||||||||||||| ||||| | |||    
T  12523372 gggcgttaaaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccagcatcttactctcaagctc 12523471  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  12523472 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 12523538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 14267215 - 14267049
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||||| |||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  14267215 gggcgtcacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 14267116  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| || ||||||||||||||||||    
T  14267115 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgaggggtatctccttgcctctc 14267049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14353532 - 14353455
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgat-aaaataactaaataataaattaggg 77  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14353532 tcacacatcgcaattattcacataaattgttcaaaatgacactaaactcgataaaaataactaaataataaattaggg 14353455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 14680263 - 14680429
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||| ||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  14680263 gggcgttacaactctcccccacttaaaagattttcgtccacgaaaatttacctcaagcaaacaattctggataagactccagcatcttactctcaagctc 14680362  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | || |||| |||||||| | ||||||   |||||||||| |||| ||||||||||| |||||||||    
T  14680363 ccacatcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcctctc 14680429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 16355761 - 16355595
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||||| || | |||| ||||||| ||||| | |||    
T  16355761 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctgggtaagcctcccgcatcttactctctagctc 16355662  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||||||    
T  16355661 ccacgtcaagctttcaccagtcgctccatcccaaacgactctcacaaggggtatttccttgcctctc 16355595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 3265305 - 3265207
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  3265305 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 3265207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 20890747 - 20890845
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  20890747 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctcattacctctc 20890845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 29454048 - 29453950
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||| | ||||||| |||| | |||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  29454048 ggatacgactcctgcatcctactctccagctcccaagtcaaactttcaccagccgctccaccccaaacgactctcacaagaggtatctctttacctctc 29453950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 7090159 - 7090324
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||| || |||||||   ||| || | |||||| || ||||||||||| || || | ||     
T  7090159 gggcgttacaactctccccaacttataagattttcgtcctcgaatatttatctcaagcaaacaactttggataagattccagcatcttactttctagctt 7090258  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    | |||| || |||||||| | ||||||  ||||||||||| | |||||||||||||||||||||||    
T  7090259 ccacgttaagctttcaccagtcgctccgtcccaaacgactcttacaagaggtatctccttgcctct 7090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 18227762 - 18227596
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| || |  | |||    
T  18227762 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttacttttaagctc 18227663  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   ||||| |||| |  |||| | ||||||||||||||||    
T  18227662 ccacgtcaagctttcaccagtcgctccaggccaaatgactctaccaagggatatctccttgcctctc 18227596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 11207739 - 11207654
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||    
T  11207739 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctc 11207654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 15003941 - 15003774
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||| | ||||||| || || |||||||||||   || ||||   ||| || |||||||| |||||| ||||||| ||||||| |    
T  15003941 tagggcgttacaactctcctcaacttaga-taattgcgtcctcgaaatattacctcaagcaaacaactctggataagactcccgcatcttactctccagc 15003843  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  15003842 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 15003774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 15319279 - 15319445
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   |  ||||   ||| || |||||||| ||||| |||||||| ||||||| |    
T  15319279 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatatttcctcaagcaaacaactctggataagactc-agcatcttactctccagc 15319376  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||||    
T  15319377 tcctatgtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctctc 15319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 18164644 - 18164545
Alignment:
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||||| ||||||| ||||||| |||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  18164644 tggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccggttactccaccccaaacaaccttcacgagaggtatatccttgcctctc 18164545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 33222685 - 33222780
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| | |||||||||||||| || ||||||    
T  33222685 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactcttacaagaggtatctctttacctctc 33222780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 18608130 - 18607980
Alignment:
Q  91 ccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttca 190  Q
    ||||||||| || |||||||||||||||||| || ||||   |||||| |||||||| || |||| |||||| ||||| | |||| |||| || ||||||    
T  18608130 ccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaataactctggataagagtccaacatcttactctcaagctcccacgttaagctttca 18608031  T
Q  191 ccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |  |||||  ||||||||||| | ||||| | ||||||||||||||||    
T  18608030 ccagttgctccagcccaaacgactctaacaagggatatctccttgcctctc 18607980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 44662374 - 44662276
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||| | ||||||| || | | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  44662374 ggatacgactcccgcatcctactctccagcttccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 44662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 15352137 - 15352036
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| ||||||| |||||| ||||| | |||| ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||| ||||||||||    
T  15352137 tctggataagactccaacatcttactctcaagctcccacgtcaagctttcaccagtcgctccatcccaaacgactctaacaaggggtatttccttgcctc 15352038  T
Q  240 tc 241  Q
    ||    
T  15352037 tc 15352036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 1649772 - 1649697
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||| ||||||||    
T  1649772 gcatcttactctccagctcccaagtcaaactttcaccagacgctccaccccaaacgactctcacaaggggtatctc 1649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 14159188 - 14159354
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| || |||||| ||| || |||||| ||||||||||| || ||||   ||| || |||||  | ||  || ||||||| ||||| | ||    
T  14159188 agggcgttacaactc-cccccaattataagattttcatcctcgaaaatttacctcaagcaaacaactctgggaaagatccccgcatcttactctctagct 14159286  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || ||||||| |||||||| | ||||||  |||||||||||||||| || |||||||| |||||||||    
T  14159287 cccacgtcaagctttcacccgtcgctccgtcccaaacgactttcacgaggggtatctctttgcctctc 14159354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 9622813 - 9622886
Alignment:
Q  11 caattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||| ||||| |||  |||| |||||||| |||||||||||||  |||||||||| ||||||||||||    
T  9622813 caattattcaaataaactatataaaaagacactaagctcgataaaataataaaataataaaatagggcgttaca 9622886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 15782708 - 15782779
Alignment:
Q  14 ttattcacataaattattc-aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| | |||| | |||||||||| ||||||||| ||||||||||| ||||||||||||    
T  15782708 ttattcaaataaattataccaaaaaggcactaaactcaataaaataaataaataataaaatagggcgttaca 15782779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 14477941 - 14477994
Alignment:
Q  32 caaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||| ||||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  14477941 caaaaagacactaaattcgataaaataaataaataataaaatagggcattacaa 14477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 15326305 - 15326406
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||| ||||| |   |||| |||||||| || ||||| |||||||| ||||||||||    
T  15326305 tctggataagaatcccgcatcttactctccagctcccaagtcaaactctcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctc 15326404  T
Q  240 tc 241  Q
    ||    
T  15326405 tc 15326406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 15359568 - 15359467
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||||| ||||||| || |||| ||||||| |||| | |||||| ||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||    
T  15359568 tctggattcgactcccgcttcttactctccagctcccaagtcaaaatttcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctc 15359469  T
Q  240 tc 241  Q
    ||    
T  15359468 tc 15359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 18463317 - 18463388
Alignment:
Q  14 ttattcacataaattattc--aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| |  |||||| |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  18463317 ttattcaaataaattataccaaaaatg-cactaaactcgataaaataaataaataataaaatagggtgttaca 18463388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 13879132 - 13879207
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctca 129  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |  ||||||||||||||||||||| ||||    
T  13879132 aaaataattaaataacaa-ttagggcattacaactctccccaacttaaagaattttcgtcctcgaaaatgtacctca 13879207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10706088 - 10706130
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  10706088 ctaaacttaataaaataaataaataataaattagggcgttaca 10706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10919858 - 10919900
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  10919858 ctaaacttaataaaataaataaataataaattagggcgttaca 10919900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 11426136 - 11426178
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  11426136 ctaaactcaataaaataaataaataataaaatagggcgttaca 11426178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 12623756 - 12623798
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  12623756 taaactcaataaaataaataaataataaaatagggcgttacaa 12623798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 16616001 - 16616043
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  16616001 ctaaactcaataaaataaataaataataaaatagggcgttaca 16616043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 19565450 - 19565408
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  19565450 ctaaactcaataaaataaataaataataaaatagggcgttaca 19565408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 26921021 - 26920979
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  26921021 ctaaactcaataaaataaataaataataaaatagggcgttaca 26920979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 30139750 - 30139792
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  30139750 ctaaactcaataaaataaataaataataaaatagggcgttaca 30139792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 46741721 - 46741763
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  46741721 ctaaactcaataaaataaataaataataaaatagggcgttaca 46741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 50161875 - 50161917
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||||||||||| |||||| |||| ||||||||||||    
T  50161875 ctaaactcgataaaataaataaatattaaaatagggcgttaca 50161917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 53629716 - 53629674
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  53629716 ctaaactcaataaaataaataaataataaaatagggcgttaca 53629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 40238988 - 40239029
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  40238988 taaactcaataaaataaataaataataaaatagggcgttaca 40239029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 9639588 - 9639628
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgtta 82  Q
    |||||||| ||||||||| ||||||||||| ||||||||||    
T  9639588 ctaaactcaataaaataaataaataataaaatagggcgtta 9639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 15070167 - 15070275
Alignment:
Q  133 aaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctcc 232  Q
    |||||| ||| |||| ||||||| |||||| |||||||  ||| | || | ||||||||| |   ||||||||||||| || ||||| |||||||| ||     
T  15070167 aaataactctagataagactccaacatcttactctccagttcccatgttagactttcaccagttactcctccccaaacaaccttcactagaggtatatct 15070266  T
Q  233 ttgcctctc 241  Q
    |||||||||    
T  15070267 ttgcctctc 15070275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 26446757 - 26446801
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||  ||||||||| ||||||||||| ||||||||||||||    
T  26446757 ctaaacttaataaaataaataaataataaaatagggcgttacaat 26446801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 13558 - 13390
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    |||||| |||||||||||||| ||||| |  |||||||||||||||||||||  || |  ||| || |||||||| |||||||||||||| || ||||||    
T  13558 tagggcattacaattctccccaacttatagaattttcgtcctcgaaaatgtacttcgtgcaaacaactctggataagactccagcatcttactttccaac 13459  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||| || |||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  13458 tcccacgttaagctttcaccagccgatccttcccaaacgactttcacaagaggtatcttcttgcctctc 13390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 8448 - 8543
Alignment:
Q  24 aaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||| || ||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| || | |||| |||||||||    
T  8448 aaattactctaaaggactctaaactcaataaaataattaaataataaaatagggcgttacaactctcccccacttaaaagaatttcatcctcgaaa 8543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 15640 - 15735
Alignment:
Q  24 aaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||| || ||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| || | |||| |||||||||    
T  15640 aaattactctaaaggactctaaactcaataaaataattaaataataaaatagggcgttacaactctcccccacttaaaagaatttcatcctcgaaa 15735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 11350 - 11393
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  11350 ctaaactcaataaaataattaaataataaaatagggcgttacaa 11393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 25651 - 25484
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||| | |||||| ||||||||||| || |||| | ||| || |||||||| |||||||||||||| |||||||||    
T  25651 tagggcgttacaactctccccaacttagga-attttcatcctcgaaaatatacctcaatcaaacaactctggataagactccagcatcttactctccaac 25553  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||||||| ||||| |  |||||||||||||| |||||||| |||| ||||||||||||||||    
T  25552 tcccacgtcaaactctcaccagttgctcctccccaaacaactttcactagagatatctccttgcctctc 25484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 16351247 - 16351081
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||||||||||||||||||||||| ||||| | |||    
T  16351247 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctc 16351148  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  16351147 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 16351081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 20136489 - 20136655
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| |||||    
T  20136489 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctaactc 20136588  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  20136589 ccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggtatctctttgcctctc 20136655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20707792 - 20707708
Alignment:
Q  1 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20707792 tcacacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataaataaataataaattaaggcgttacaa 20707708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 19761545 - 19761348
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | |||||||  ||||||| || ||||||||||||| ||||| | ||||| |  ||||||||||| ||||||||| ||| |   || || ||    
T  19761545 ctaaactcaacaaaataatcaaataattaaatagggcgttacaactctcctcaacttatagaattttcgtcctggaaaatgtacctcgtg--aacaactc 19761448  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| ||||||||||| || || || |||||| |||| |||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||    
T  19761447 tggataagactccagcattttactttctaactcccacgttaaactttcaccatccgctccttcccaaacgactttcacaagaggtatctctttgcctctc 19761348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 50613096 - 50612898
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| |||||||| ||   ||| ||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || ||    
T  50613096 ctaaactcaacaaaataattaaataatcaaaacgggtgttacaactctccccaacttataagattttcgtcctcgaaaat-tacctcatgcaaacaactc 50612998  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| || ||||||||||| |||||||||||| |||| || |||||||| | |||||    ||||||||||||||||||||||||||| |||||||||    
T  50612997 tggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctctgttccaaacgactttcacaagaggtatctctttgcctctc 50612898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 50620924 - 50620726
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||| |||||||| ||   ||| ||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || ||    
T  50620924 ctaaactcaacaaaataattaaataatcaaaacgggtgttacaactctccccaacttataagattttcgtcctcgaaaat-tacctcatgcaaacaactc 50620826  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| || ||||||||||| |||||||||||| |||| || |||||||| | |||||    ||||||||||||||||||||||||||| |||||||||    
T  50620825 tggataagattccagcatcttactctccaactcccacgttaagctttcaccagtcgctctgttccaaacgactttcacaagaggtatctctttgcctctc 50620726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 19106078 - 19106244
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  19106078 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 19106177  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  19106178 ccacgttaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 19106244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 33391677 - 33391511
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||||| | |||    
T  33391677 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttaccttaagcaaacaactctggataagactccagcatcttactctcaagctc 33391578  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  33391577 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 33391511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 41355117 - 41354955
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||||||||||||||||||||||| ||||| | |||    
T  41355117 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagtaaacaactctggatacgactccagcatcttactctcaagctc 41355018  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| ||||||||||| |||||    
T  41355017 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctctttgcc 41354955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 51334141 - 51333975
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  51334141 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 51334042  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  51334041 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcacgagaggtatctccttgcctctc 51333975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 241
Target Start/End: Original strand, 21836664 - 21836827
Alignment:
Q  78 cgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactccta 177  Q
    |||||||| || |||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||| |    
T  21836664 cgttacaactcccccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctccca 21836763  T
Q  178 cgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  21836764 cgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 21836827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 21830014 - 21830180
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||    || || |||||||| |||||||||||||| ||||| | |||    
T  21830014 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctc 21830113  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | |||| |   |||||||||| |||| |||||||||||||||||||||    
T  21830114 ccacgtcaagctttcaccagtcgcttccgtccaaacgactctcacgagaggtatctccttgcctctc 21830180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 21162991 - 21163157
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||| ||||||||||| || ||| || ||| || |||||||| |||||||||||||| ||||| | |||    
T  21162991 gggcgttacaactctccccaacttataagattttcatcctcgaaaatttacctcgtttaaacaactctggataagactccagcatcttactctctagctc 21163090  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||  || |||||||| |||| |||||||| ||||||||||||    
T  21163091 ccacgttaagctttcaccagtcgctccgtccaaaacgactatcacgagaggtatatccttgcctctc 21163157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 20249560 - 20249727
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || ||||||||||| ||||||  | |||| | ||| || |||||||| || ||||||||||| ||||| | ||    
T  20249560 agggcgttacaactctccccaacttataagattttcgtcctagaaaattaacctcaatcaaacaactctggataagattccagcatcttactctctagct 20249659  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | || |||  ||||||||||| ||||||||||||| ||||||||||||    
T  20249660 cccacgttaagctttcaccagtcgttccgtcccaaacgactctcacaagaggtatatccttgcctctc 20249727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 21747245 - 21747412
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||| ||| ||||| || |||||||||||||||||| || |||||  ||| || ||| |||| || ||||||||||| || || | ||    
T  21747245 agggcgttacaactctacccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctagataagattccagcatcttactttctagct 21747344  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  21747345 cccacgttaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctctttgcctctc 21747412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 16079281 - 16079115
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||| ||| || || | |||    
T  16079281 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcaacttactttctagctc 16079182  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | | ||||| |||||||| | ||||||  ||||||||||| | || |||||||||||||||||||||    
T  16079181 ccatgtcaagctttcaccagtcgctccagcccaaacgactctaacgagaggtatctccttgcctctc 16079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 20294191 - 20294289
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  20294191 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctccttacctctc 20294289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 31550761 - 31550663
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||| ||||| || ||||||    
T  31550761 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggaatctctttacctctc 31550663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 37676855 - 37676953
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||| | ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  37676855 ggatacgactcccgcatcctactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 37676953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 19665525 - 19665358
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   ||  ||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  19665525 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacttcaatcaaacaactctggatacgactcccgcatcttactctccagc 19665427  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| ||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  19665426 tcccaagtcaaactctcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 19665358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 20075642 - 20075551
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctcctt 234  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| | |||||||||| |||||||| ||||||||||    
T  20075642 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccactccaaacgactctcacaagatgtatctcctt 20075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 20395576 - 20395478
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| ||||| ||||||| ||||||| |||| | |||||||||||||  | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  20395576 ggatacaactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 20395478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 21736529 - 21736630
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||||||||||||| ||||||| ||||||| |||| | ||||||||||||||||    | |||||||||| || ||||| |||||||| ||||||||||    
T  21736529 tctggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccggttatttctccccaaacaaccttcactagaggtatatccttgcctc 21736628  T
Q  240 tc 241  Q
    ||    
T  21736629 tc 21736630  T

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Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 34393123 - 34393202
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgtta 82  Q
    ||||||| |||||||||| ||||||||| |||||  ||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  34393123 acacatcacaattattcaaataaattatacaaaaaaacattaaactcaataaaataaataaataataaaatagggcgtta 34393202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 20243976 - 20244073
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  20243976 tctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 20244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 22433683 - 22433602
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||||| ||||||| |||| | |||||||| ||||| |||||||| |||||||||||| ||||||| ||||| ||||||||    
T  22433683 gcatcttactctccagctcccaagtcaaactctcaccagccgctccgccccaaacgactctcacaaggggtatttccttgcc 22433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 20940646 - 20940545
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    ||||||||||||||| ||||||| ||||||| |||| | |||||||| ||||  |   |||| |||||||| || ||||| |||||||| ||||||||||    
T  20940646 tctggatacgactcccgcatcttactctccagctcccaagtcaaactctcactagttactccaccccaaacaaccttcactagaggtatatccttgcctc 20940547  T
Q  240 tc 241  Q
    ||    
T  20940546 tc 20940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 37191759 - 37191836
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| ||||| ||||||| ||| ||||  ||| |||| ||||||||||||||    
T  37191759 ctaaactcaataaaataaataaataataaaatagggtgttacaactctaccccctttaaaataatttcgtcctcgaaa 37191836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 21238766 - 21238721
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  21238766 ctaaactcaataaaataaataaataataaaatagggcgttacaatt 21238721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 24719013 - 24718968
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  24719013 ctaaactcaataaaataaataaataataaaatagggcgttacaatt 24718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 8275535 - 8275492
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  8275535 ctaaactcaataaaataaataaataataaaatagggcgttacaa 8275492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 21187791 - 21187720
Alignment:
Q  14 ttattcacataaattattc-aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| | |||| | |||||||||||||||||||| | ||||| ||| ||||||||||||    
T  21187791 ttattcaaataaattataccaaaaaggcactaaactcgataaaataaatgaataacaaaatagggcgttaca 21187720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 45499912 - 45499963
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||    
T  45499912 aaaaagactctaaactcaataaaataaataaataataaactagggcgttaca 45499963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 50546315 - 50546358
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  50546315 ctaaactcaataaaataaataaataataaaatagggcgttacaa 50546358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 18122498 - 18122540
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  18122498 ctaaactcaataaaataaataaataataaaatagggcgttaca 18122540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 20589257 - 20589299
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  20589257 ctaaactcaataaaataaataaataataaaatagggcgttaca 20589299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 20593795 - 20593837
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  20593795 ctaaactcaataaaataaataaataataaaatagggcgttaca 20593837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 21045472 - 21045430
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  21045472 ctaaactcaataaaataaataaataataaaatagggcgttaca 21045430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 24722918 - 24722876
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  24722918 ctaaactcaataaaataaataaataataaaatagggcgttaca 24722876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 16057767 - 16057722
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    |||||||| ||||||||| |||||| |||| |||||||||||||||    
T  16057767 ctaaactcaataaaataaataaatattaaaatagggcgttacaatt 16057722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 21099284 - 21099243
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  21099284 taaactcaataaaataaataaataataaaatagggcgttaca 21099243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 25250524 - 25250567
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  25250524 ctaaactcaataaaataaataaataataaa-tagggcgttacaat 25250567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 35895453 - 35895493
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttac 83  Q
    ||||||| ||||||||| ||||||||||| |||||||||||    
T  35895453 taaactcaataaaataaataaataataaaatagggcgttac 35895493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 44892929 - 44892973
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  44892929 ctaaactcaataaaataaataaataataaaatagggtgttacaat 44892973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 87014 - 86917
Alignment:
Q  144 gatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  87014 gatacgactccagcatcttactttccaactcccacgtcaaactttcaccagccgctccttcccaaacgactttcacaagaggtatctccttgcctctc 86917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 18415 - 18316
Alignment:
Q  22 ataaattattcaaaatgacactaaactcgataaaataactaaataat--aaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||||||| ||| ||| ||| |||| ||||||||| |||| ||   ||| ||| ||||||||| |||||||||||||||| |  |||||||| ||||    
T  18415 ataaattattctaaaagactctatactcaataaaataaataaacaaataaaaatagcgcgttacaactctcccccacttagaagaacttcgtccttgaaa 18316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 26500 - 26334
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || ||| |||| ||||||| |||||| |||||||||||    
T  26500 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctagataagactccaacatcttactctccaactc 26401  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||| ||  |||||||||||||||||||||||||||| |||||||||    
T  26400 ccacgtcaagctttcaccagtcgccccgtcccaaacgactttcacaagaggtatctctttgcctctc 26334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 32258 - 32331
Alignment:
Q  14 ttattcacataaattattc-aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaatt 87  Q
    ||||||| ||||||||| | |||| | || ||||||||||||||||| ||||||||||| |||||||||||||||    
T  32258 ttattcaaataaattataccaaaaaggcattaaactcgataaaataa-taaataataaaatagggcgttacaatt 32331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 972 - 1069
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||||| || ||| ||||||| ||||||| |||| | |||||||||||||| |   ||||||||||||| || || || |||||||| |||||| ||||    
T  972 ggataagattcccgcatcttactctccagctcccaagtcaaactttcaccagttactcctccccaaacaacctttactagaggtatatccttgactct 1069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 179944 - 180110
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  179944 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctc 180043  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||  ||||||||||||||||||||||||||    
T  180044 ccacgtcaagctttcaccagtcgctccgttccaaacgaccctcacaagaggtatctccttgcctctc 180110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 290 - 103
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| ||||||| || ||||||| |||||| ||||||| ||||| |  |||||||||||||||||  || |||| | ||| || |||||||| ||||    
T  290 aaaataattaaataagaa-ttagggcattacaactctccccaacttaaagaattttcgtcctcgaaaacatacctcaatcaaacaactctggataagact 192  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||| |||||||||||| |||||||||| ||||| |   ||||||||||||| |||||||| |||| ||||||||||||||||    
T  191 ccaacatcttactctccaactcccacgtcaaactctcaccagtttctcctccccaaacaactttcactagagatatctccttgcctctc 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 16692 - 16880
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| ||  |||||||||||| ||||||| ||||| |   ||||||||||  |||||||| |||||   || || |||||||| ||||    
T  16692 aaaataatcaaataatcaaagagggcgttacaactctccccaacttatagatttttcgtcctaaaaaatgtacctcatgcgaacaactctggataagact 16791  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||| ||||| | |||| |||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16792 ccaacatcttactctctagctcccacgttaagctttcaccagccgctccttcccaaacgactttcacaagaggtatctccttgcctctc 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 9069 - 9236
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||| || || ||  ||| || |||||||| ||| |||||||||| ||||| | ||    
T  9069 agggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctaatgcaaacaactctggataagacaccagcatcttactctctagct 9168  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||| | | ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  9169 cccacgttaagctttcatcagtcgctccttcccaaacgactctcacaagaggtatctccttgcctctc 9236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 7071 - 7270
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  7071 ctaaactcgattaaataagcaattaacaaaagtgggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 7170  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||| | ||||| | |||| ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  7171 tggataagactccagcatcctactctcaagctcccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 141 - 307
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||| || || |   ||| || |||||||| |||||||||||||| ||| | | |||    
T  141 gggcgttacaactctcccccatttaaaagattttcgtcctcgaaaatttaccttaagtaaacaactctggataagactccagcatcttactcccaagctc 240  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| |||||||| | |||||||  |||||||||| |||| |||||||||||||||||||||    
T  241 ctacgtcaagctttcaccagtcgctcctaaccaaacgactctcacgagaggtatctccttgcctctc 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 1401 - 1235
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||||||  | |||||  ||| || |||||||| |||||||||||||| ||||| | |||    
T  1401 gggcgttacaactctccccaacttataagattttcgtcctcgaaaattaacctcatgcaaacaactctggataagactccagcatcttactctctagctc 1302  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| ||||||| ||||||||||||||||||    
T  1301 ccacgtcaagctttcaccagtcgctccgttccaaacgactctcacaaggggtatctccttgcctctc 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 14452 - 14529
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||| | | |||| |||| || | ||||||||||||||    
T  14452 ctaaactcaataaaataaataaataataaaatagggcgttacaactataccccccttaaaagaatttcgtcctcgaaa 14529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 33331 - 33165
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||| |  ||| || |||||||| || ||||||||||| |||||||||||    
T  33331 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcgtgcaaacaactctggataagattccagcatcttactctccaactc 33232  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||  |  ||||||||||||||||||||||||| |||||||||    
T  33231 ccacgttaagctttcaccagtcgctccgtcttaaacgactttcacaagaggtatctctttgcctctc 33165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 14087 - 14253
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  14087 gggcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 14186  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  14187 ccacgtcaagctttcaccagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 14253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 347 - 513
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||||||||||  |||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| | ||| | |||    
T  347 gggcgttacaaccctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttacgctcaagctc 446  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  447 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 64610 - 64444
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| ||||||| |||||| ||||| | |||    
T  64610 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccaccatcttactctcaagctc 64511  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| ||||||||   |||||   ||||||||||| ||||||||||||||||||||||||||    
T  64510 ccacgtcaagctttcaccattcgctctgtcccaaacgactctcacaagaggtatctccttgcctctc 64444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 71; Significance: 3e-32; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 42881 - 43047
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| |  |||||||| |||||||||||||| ||||| | |||    
T  42881 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctc 42980  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  42981 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 43047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 62016 - 62182
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| |  |||||||| |||||||||||||| ||||| | |||    
T  62016 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacagctctggataggactccagcatcttactctcaagctc 62115  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  62116 ccacgtcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 62182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 2708 - 2540
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| ||||| || ||||| ||||||||||||| | |||||  |||  | |||||||| ||||| |||||||| || |||| |    
T  2708 tagggcgttacaactctccccaacttataaaatttttgtcctcgaaaatgcacctcatgcaaacgactctggataagactctagcatcttactttccagc 2609  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||| ||||| ||||| | ||||||| || ||||||| |||||||||||||||||||||||||||    
T  2608 tcccacgttaaactctcaccagtcgctccttcctaaacgaccttcacaagaggtatctccttgcctctc 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 8179 - 8378
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||  || ||| |||   ||||||||||| ||||||||| ||| || |||||||||||||||||| || ||||   |||||| ||    
T  8179 ctaaactcgattaaataagcaattaacaaaagtgggcgttacaactctcccccaattaaaagattttcgtcctcgaaaatttacctcaagcaaataactc 8278  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| ||||| |||||||| ||||| | |||| ||||||| || ||||| | || |||   |||||||| | |||| |||||||||||||||||||||    
T  8279 tggataagactctagcatcttactctcaagctcccacgtcaagctctcaccagtcgttcccgtccaaacgaatctcacgagaggtatctccttgcctctc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 51094 - 50927
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| | |||||||||   || ||||   ||| || ||||| ||| ||||| ||||||| || |||| |    
T  51094 tagggcgttacaactctccccaacttagaggattt-catcctcgaaatcttacctcaaacaaacaactctgggtacaactcccgcatcttactttccagc 50996  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || |||||||| |  | |||||| |||||||||||| ||||||| |||||||| || ||||||    
T  50995 tcccaagttaaactttctctagtcgctccaccccaaacgactctcacaagtggtatctctttacctctc 50927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 68473 - 68358
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaa 102  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||    
T  68473 acacatcacaattattcaaataaattatacaaaa-gacactaaactcgataaaataaataaataataaaatagggcgttacaactctcccccacttaaaa 68375  T
Q  103 tattttcgtcctcgaaa 119  Q
     | |||||| |||||||    
T  68374 gaatttcgtactcgaaa 68358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 17076 - 16878
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    |||||||| | ||||||  |||||||| ||   ||||||||||| ||||||| ||||| || |||||||||||||||| | || ||||   ||| || ||    
T  17076 ctaaactcaacaaaatatttaaataatcaaaacgggcgttacaactctccccaacttataagattttcgtcctcgaaatt-tacctcaagcaaacaactc 16978  T
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||| |||||||||||||| |||||||||||| |||| || |||||||  | |||||   |||||||||||||||||||||||||||| |||||||||    
T  16977 tggataagactccagcatcttactctccaactcccacgttaagctttcactagtcgctcagtcccaaacgactttcacaagaggtatctctttgcctctc 16878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 228769 - 228936
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || ||||||||||| || ||| || |||||  ||| || |||||||| |||||||| ||||| |||||   ||    
T  228769 agggcgttacaactctccccaacttataagattttcgtccttgagaatttacctcatgcaaacaactctggataagactccagtatcttactctctggct 228868  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  228869 cccacgttaagctttcaccagtcgctccttcccaaacgactttcacaagaggtatctctttgcctctc 228936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 219997 - 219831
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| |  ||||| |||||||||||| |||||| |  ||| || |||||||| ||||||||||| ||||| |||| ||    
T  219997 agggcgttacaactctccccaacttataggatttttgtcctcgaaaatttatctcgtgcaaacaactctggataagactccagcattttgctttccatct 219898  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    || |||| || |||||||| ||||||||  |||| ||||||| |||| |||||||||||||||||||    
T  219897 cccacgttaagctttcaccagccgctccgtcccatacgacttgcacatgaggtatctccttgcctct 219831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 561 - 395
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||    || || |||||||| || |||| |||||| ||||| | |||    
T  561 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagattccaacatcttactctctagctc 462  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  |||||||||||||||||||||||||||| |||||||||    
T  461 ccacgtcaagctttcaccagtcgctccgtcccaaacgactttcacaagaggtatctctttgcctctc 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 5741 - 5907
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  5741 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 5840  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||| | | | ||||||  ||| ||||||| ||||||||||||||||||||||||||    
T  5841 ccacgtcaagcttttaacagtcgctccgtccccaacgactctcacaagaggtatctccttgcctctc 5907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 6665 - 6831
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||    || || |||||||| |||||||||||||| ||||| | |||    
T  6665 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagactccagcatcttactctcaagctc 6764  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | |||| |   |||||||||| |||| |||||||||||||||||||||    
T  6765 ccacgtcaagctttcaccagtcgcttccgtccaaacgactctcacgagaggtatctccttgcctctc 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 30638 - 30804
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||| | || ||| || ||| || |||||||| |||||||||||||| ||||| | |||    
T  30638 gggcgttacaactctccccaacttataagattttcgtcctcgaaagtttacctcgttcaaacaactctggataagactccagcatcttactctctagctc 30737  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | ||||||  || |||||||| |||| |||||||||||||||||||||    
T  30738 ccacgttaagctttcaccagtcgctccgtccgaaacgactctcacgagaggtatctccttgcctctc 30804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 27694 - 27860
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| ||||||  |||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| ||||||| |||||| ||||| | |||    
T  27694 gggcattacaacactccccaacttaaaagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccaacatcttactctcaagctc 27793  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||  ||||||||||||||||||||||||||    
T  27794 ccacgtcaagctttcaccagtcgctccgtcccaaacgaccctcacaagaggtatctccttgcctctc 27860  T

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Target: scaffold0109 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 34152 - 33986
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  34152 gggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 34053  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || |||||||| | |||||   ||||||||||| | ||||| ||||||||||||||||||    
T  34052 ccacgttaagctttcaccagtcgctctagcccaaacgactataacaaggggtatctccttgcctctc 33986  T

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Target: scaffold0109; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 8323 - 8489
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||| | || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  8323 gggcgttacaactctcccctactaaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 8422  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||| ||| | ||||| ||||| ||||||||||||    
T  8423 ccacgtcaagctttcaccagtcgctccagcccaaacaactctaacaaggggtatttccttgcctctc 8489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 40368 - 40202
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||    || || |||||||| |||||||| ||||| ||||| | |||    
T  40368 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagactccagtatcttactctctagctc 40269  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||  | ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  40268 ccacgtcaagctttcactagtcgctccatcccaaacgactctcacaagaggtatctccttgcctctc 40202  T

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Target: scaffold0042; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 65134 - 65299
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| || ||||   ||| || | |||| | |||||||||||||| ||||| | |||    
T  65134 gggcgttacaactctcccccacttaaaagattttc-tcctcgaaaatttacctcaagcaaacaactatggacaagactccagcatcttactctcaagctc 65232  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| ||||| |  | ||||||  ||||||||||| | ||||| ||||||||||||||||||    
T  65233 ccacgtcaagctttctctagtcgctccagcccaaacgactctaacaaggggtatctccttgcctctc 65299  T

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Target: scaffold0022 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 231
Target Start/End: Complemental strand, 127800 - 127622
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| |||||||| ||   ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||| |  ||| || |||||||| || |    
T  127800 aaaataattaaataatcaaagtgggcgttacaactctccccaacttataacattttcgtcctcgaaaatttacctcttgcaaacaactctggataagatt 127701  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctc 231  Q
    ||| ||| || |||||||||||| |||| || |||||||| | ||||||  ||||||||||||||||||||||||||||    
T  127700 ccaacatattactctccaactcccacgttaagctttcaccagtcgctccgtcccaaacgactttcacaagaggtatctc 127622  T

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Target: scaffold0761 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 5159 - 5022
Alignment:
Q  104 attttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctc 203  Q
    |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| ||||| | |||| ||||||| |||||||| | |||||| |    
T  5159 attttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctcaagctcccacgtcaagctttcaccagtcgctccgc 5060  T
Q  204 cccaaacgactttcacaagaggtatctccttgcctctc 241  Q
     |||||||||| |||| |||||||||||||||||||||    
T  5059 tccaaacgactctcacgagaggtatctccttgcctctc 5022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 39470 - 39303
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||  |||| || |||||||| |||||| ||||||| ||||||| |    
T  39470 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaggaaacaactctggataagactcccgcatcttactctccagc 39372  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  39371 tcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 39303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 1927 - 2115
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| ||  ||||||||||||  |||||  ||||| |  |||||||||||||||||| || ||||   ||| || |||||||| ||||    
T  1927 aaaataatcaaataattaaagagggcgttacaacgctcccgaacttataggattttcgtcctcgaaaatttacctcacacaaacaactctggataagact 2026  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||||| |||||||  ||| |||| || |||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||    
T  2027 ccaacatcttactctccatttcccacgttaagctttcaccagccgctccgtcccaaacgactttcacaagaggtatctctttgcctctc 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 42913 - 42746
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| ||||||| |||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  42913 tagggcgttacaactctccccaacttagagaattt-cgtcctcaaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagc 42815  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || ||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  42814 tcccaagtaaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 47979 - 47812
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| ||||||| |||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  47979 tagggcgttacaactctccccaacttagagaattt-cgtcctcaaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagc 47881  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || ||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  47880 tcccaagtaaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 47812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 865 - 1032
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  865 agggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagct 964  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||| ||| | ||||||  | ||||||||| |||||||||||||||| |||||||||    
T  965 cccacgttaagcttttaccagtcgctccgtctcaaacgactctcacaagaggtatctcattgcctctc 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 3758 - 3925
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| ||||| |  |||||| | |||||||||||| |||||  ||| || |||||||| |||||||| ||||| ||||| | ||    
T  3758 agggcgttacaactctccccaacttataggattttcattctcgaaaatgtacctcatgcaaacaactctggataagactccagtatctttctctctagct 3857  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || |||||||  ||||||||   |||||| ||||||||||||||||||||||||||||||    
T  3858 cccacgttaagctttcactagccgctccgtgccaaacaactttcacaagaggtatctccttgcctctc 3925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 6000 - 6166
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    |||| |||||| ||||||| ||||| || |||||||||||||||||| || ||||    || || |||||||| |||| ||||||||| ||||| | |||    
T  6000 gggcattacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcgaacaactctggataagacttcagcatcttactctctagctc 6099  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  6100 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctccatgcctctc 6166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 13766 - 13932
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||  ||||| || ||||| |||||||||||| || ||||   ||| || |||||||| ||||||||||| || ||||| | |||    
T  13766 gggcgttacaactctccctaacttataagatttttgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcattttactctctagctc 13865  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  13866 ccacgtcaagctttcaccagtcgctccgtcccaaacgactctcacaagaggtatctctttgcctctc 13932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 31202 - 31303
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||| | ||||||| ||||| ||| || | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||    
T  31202 tctggataagacttccgcatcttactctctaacccccaagtcaaactttcaccggttactccaccccaaaccaccttcactagaggtatatccttgcctc 31301  T
Q  240 tc 241  Q
    ||    
T  31302 tc 31303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 4949 - 5115
Alignment:
Q  76 ggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcc 175  Q
    |||||||||| ||||||| ||||| || |||| ||||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||||    
T  4949 ggcgttacaactctccccaacttataaaatttccgtcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagctcc 5048  T
Q  176 tacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctct 242  Q
     |||  || |||||||| | ||||||  |||| |||||| |||||||||||||||||||||||||||    
T  5049 cacggtaagctttcaccagtcgctccgtcccacacgactatcacaagaggtatctccttgcctctct 5115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 14603 - 14770
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| |||| || ||||| |  ||||| ||||| |||||| || || |   ||| || |||||||| |||||||||||||| ||||| | ||    
T  14603 agggcgttacaactctctccaacttataggattttagtcctagaaaatttaccttaagcaaacaactctggataagactccagcatcttactctctagct 14702  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||  ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||    
T  14703 cccacgataaactttcaccagtcgctccttcccaaacgaccttcacaagaggtatctccttgcctctc 14770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 110218 - 110270
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctccccc 94  Q
    |||||||| ||||||||| ||||||||||| |||||| |||||| ||| ||||    
T  110218 ctaaactcaataaaataaataaataataaaatagggcattacaactctacccc 110270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 4984 - 4818
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||| | || |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  4984 gggcgttacaactctcccctactaaaaagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 4885  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||| | ||||||  ||||||| ||| | ||||| ||||| ||||||||||||    
T  4884 ccacgtcaagctttcaccagtcgctccagcccaaacaactctaacaaggggtatttccttgcctctc 4818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 447790 - 447952
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||| ||||| |  ||||| |||||||||||| || ||| |  ||| || |||||||| |||| ||||||||| ||||| | |||| ||    
T  447790 gttacaactctccccaacttataggatttttgtcctcgaaaatttacctcgtgcaaacaactctggataagacttcagcatcttactctctagctcccac 447889  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
     | || |||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  447890 attaagcttttaccagccgctccttcccaaacgactttcacaagaggtatctctttgcctctc 447952  T

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Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 161838 - 162006
Alignment:
Q  74 agggcgttacaattctccccca-cttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    |||||||||||| ||||||||| |||| || |||||||||||||||||| || ||||   ||  || |||||||| || ||||||||||| | ||| | |    
T  161838 agggcgttacaactctcccccaacttataagattttcgtcctcgaaaatttacctcaagcaaccaactctggataggattccagcatcttacgctctagc 161937  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| |||| || | |||||| | |||||||  |||||| ||| ||||||| ||||||||||||| ||||    
T  161938 tcccacgttaagcgttcaccagtcgctcctttccaaacaactctcacaagtggtatctccttgcttctc 162006  T

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Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 30750 - 30818
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||||| |||||| |||| ||||||||||||| |||  ||| |||| || | ||||||||||||||    
T  30750 ataaaataaataaatattaaaatagggcgttacaactctatcccccttaaaagaatttcgtcctcgaaa 30818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 36057 - 36125
Alignment:
Q  51 ataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    ||||||||| |||||| |||| ||||||||||||| |||  ||| |||| || | ||||||||||||||    
T  36057 ataaaataaataaatattaaaatagggcgttacaactctatcccccttaaaagaatttcgtcctcgaaa 36125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 29351 - 29182
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacgactccagcatcttgctctccaa 171  Q
    ||||||||||||| ||||| | ||||| |  |||||||||||||||||| | | ||||   ||| || |  ||||| |||||||||||||| |||||||     
T  29351 tagggcgttacaactctccgcaacttaaagaattttcgtcctcgaaaatattacctcaaacaaacaacttcggataagactccagcatcttactctccag 29252  T
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| | | |||||||||||| |  |||||||||||||| |||||||| |||||||||||||||||||||    
T  29251 ctcccatgccaaactttcaccagttgctcctccccaaacaactttcactagaggtatctccttgcctctc 29182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 41342 - 41173
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgt-atctcattgaaataaatctggatacgactccagcatcttgctctccaa 171  Q
    ||||||||||||| ||||| | ||||| |  |||||||||||||||||| | | ||||   ||| || |  ||||| |||||||||||||| |||||||     
T  41342 tagggcgttacaactctccgcaacttaaagaattttcgtcctcgaaaatattacctcaaacaaacaacttcggataagactccagcatcttactctccag 41243  T
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| | | |||||||||||| |  |||||||||||||| |||||||| |||||||||||||||||||||    
T  41242 ctcccatgccaaactttcaccagttgctcctccccaaacaactttcactagaggtatctccttgcctctc 41173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 63478 - 63385
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || |||||  ||| || |||||||| |||||||||||||| |||||    
T  63478 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcatgcaaacaactctggataagactccagcatcttactctc 63385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 17017 - 16829
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    |||||||  ||||||| ||  |||| ||||||| ||||||  ||||| |  ||||| |||||||||||| || |||||  ||| || |||||| | ||||    
T  17017 aaaataatcaaataatcaaagagggagttacaactctccctaacttataggatttttgtcctcgaaaatttacctcatgcaaacaactctggaaaagact 16918  T
Q  153 ccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||| || || | |||| | || || |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  16917 ccagtatcttactttctagctcccaagttaagctttcaccagcggctccttcccaaacgactttcacaagaggtatctccttgcctctc 16829  T

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Target: scaffold1102 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 1696 - 1613
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  1696 acacatcacaattattcaaataaattatgcaaaaagacactaaactcgataaaataaataaataacaaaatagggcgttacaat 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 17224 - 17126
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  17224 ggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 17126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 37325 - 37159
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || ||||| |||||| ||||| || ||||   ||| || |||||||| ||||||| |||||| ||||| | | |    
T  37325 gggcgttacaactctccccaacttataagatttttgtcctcaaaaatttacctcaagcaaacaactctggataagactccaacatcttactctcaagccc 37226  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | ||||||| |||||||  | ||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  37225 ccacgtcaagctttcactagtcgctccgtcccaaacgactctcacaagaggtatctccctgcctctc 37159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 19252 - 19155
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||| || ||| ||||||| ||||||| |||||| |||||||||||||  | ||||||  ||||||||||| ||| ||| ||||| ||||||||    
T  19252 tctggataagaatcccgcatcttactctccagctcctaagtcaaactttcacaagtcgctccgtcccaaacgactctcaaaaggggtatttccttgcc 19155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 405 - 566
Alignment:
Q  77 gcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcct 176  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| |  |||||||| || ||||||||||| ||||| | ||||     
T  405 gcgttacaactctccccaacttaaaagattttcgtcctcgaaaatttacctcaagcaaacatctctggataagattccagcatcttactctctagctccc 504  T
Q  177 acgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcct 238  Q
    |||| |  |||||||| | ||||| | ||||||||||| |||||||||||||||| ||||||    
T  505 acgttaggctttcaccagtcgctcattcccaaacgactctcacaagaggtatctctttgcct 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 5582 - 5415
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || |||||||| | |||| ||||||| ||||||| |    
T  5582 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggatatgtctcccgcatcttactctccagc 5484  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   ||||||||||||| |||||||| |||||||| ||||||||||||    
T  5483 tcccaagtcaaactttcaccagttactcctccccaaacaactttcactagaggtatatccttgcctctc 5415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 11644 - 11788
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  11644 gggcgttacaactctcccccacttaaaggattttcgtcctcgaaaatttacctcaagcaaacaactctggataagactccagcatcttactctcaagctc 11743  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcac 219  Q
    | ||||||| |||||||| | ||||||   |||||||||| ||||    
T  11744 ccacgtcaagctttcaccagtcgctcccgaccaaacgactctcac 11788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 5498 - 5331
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  5498 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggatacgactcctgcatcttactctccagc 5400  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||  || ||||| |||||||| ||||||||||||    
T  5399 tcccaagtcaaactctcaccggttactccaccccaaaaaaccttcactagaggtatatccttgcctctc 5331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 14486 - 14320
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| | |||  | | ||||||||||||||   || |||| | ||| || |||||||| || ||| ||||||| ||||||| |    
T  14486 tagggcgttacaactctccccaaatta-cagaatttcgtcctcgaaatcttacctcaatcaaacaactctggataagaatcccgcatcttactctccagc 14388  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | |||||||| | ||| |   ||||||||||||| || ||||| |||||||| |||||||||||    
T  14387 tcccaagtcaaactctaaccagttactcctccccaaacaaccttcactagaggtatatccttgcctct 14320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 3617 - 3783
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || |||||||| |||||| ||||||| ||||||| |    
T  3617 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaatcaaacaactctggataagactcctgcatcttactctccagc 3715  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||| |||||    
T  3716 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttacctct 3783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 3806 - 3640
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    |||||||||||| ||||||| |||||||  |||| |||| ||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| ||    
T  3806 agggcgttacaactctccccaacttagagaattt-cgtcatcgaaatattacctcaaacaaacaactctggatacgactcccgcatcttactctccagct 3708  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| |||||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  3707 cctaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 3640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 15219 - 15386
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaact 173  Q
    ||||| |||||| ||||||| ||||| || || ||| ||||||||||| || |||||  ||| || |||||||| || ||||||||||| ||||| | ||    
T  15219 agggcattacaactctccccaacttataagatattcatcctcgaaaatttacctcatgcaaacaactctggataagattccagcatcttactctctagct 15318  T
Q  174 cctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    || |||| || ||||| |  | ||||||| ||||||||||||||||| |||||||||| || ||||||    
T  15319 cccacgttaagctttcgctagtcgctccttcccaaacgactttcacaggaggtatctcttttcctctc 15386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 2390 - 2485
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||| ||||||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  2390 tacgactcccgcatcttactctccagctcccaagtcaaaatttcaccagtcgctccaccccaaacgactctcacaagaggtatctccttacctctc 2485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 10658 - 10809
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| || ||||   ||| || | || ||| || ||||||||||| ||||| | |||    
T  10658 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacctcaagcaaacaactttgtataagattccagcatcttactctctagctc 10757  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggt 226  Q
    | |||| || |||||||| | ||||||| ||||||||||| |||||||||||    
T  10758 ccacgttaagctttcaccagtcgctccttcccaaacgactctcacaagaggt 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 248411 - 248506
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||  | ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  248411 tacgactcccgcatcttactctccagctcccaagtcaaactttcactagtcgctccatcccaaacgactctcacaagaggtatctccttgcctctc 248506  T

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Target: scaffold0413 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 732 - 898
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||  ||||| || |||||  ||| || | |||||| || || |||||||| ||||| | |||    
T  732 gggcgttacaactctccccaacttataagattttcgtcctaaaaaatttacctcatgcaaacaactgtggataagattctagcatcttactctctagctc 831  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | || |||| ||| |||| | ||||||  ||||||||||||||||||||||||| || |||||||||    
T  832 ccacttcaatcttgcaccagtcgctccatcccaaacgactttcacaagaggtatttctttgcctctc 898  T

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Target: scaffold0324 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 16684 - 16850
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| || |||| | ||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||| ||||||| ||||| | |||    
T  16684 gggcgttacaactcaccccaatttataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattcctgcatcttactctctagctc 16783  T
Q  175 ctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| || ||||||||   ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  16784 ccacgttaagctttcaccaatcgctccgtcccaaacgactctcacaagaggtatctcattgcctctc 16850  T

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Target: scaffold0161 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 1268 - 1106
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctac 178  Q
    ||||||| ||||||| ||||| || |||||| ||||  ||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | || | |     
T  1268 gttacaactctccccaacttataagattttcatcctaaaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagcttccat 1169  T
Q  179 gtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||||| | ||||||  ||||||||||| |||| |||||||||||||||||||||    
T  1168 gtcaagctttcaccagtcgctccgtcccaaacgactctcaccagaggtatctccttgcctctc 1106  T

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Target: scaffold0060 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 42578 - 42676
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||||| ||||||| ||||||| |||| | |||||||||||||| | ||||||  |||||||||||  |||||||||||| ||||||||||||    
T  42578 ggatacgactcctgcatcttactctccagctcccaagtcaaactttcaccagtcgctccatcccaaacgactcacacaagaggtatttccttgcctctc 42676  T

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Target: scaffold0056 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 12890 - 12764
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| |||||||   ||| || |||||||| ||||||| |||||| ||||| | |||    
T  12890 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttatctcaagcaaacaactctggataagactccaacatcttactctctagctc 12791  T
Q  175 ctacgtcaaactttcaccggccgctcc 201  Q
    | ||||||| |||||||| | ||||||    
T  12790 ccacgtcaagctttcaccagtcgctcc 12764  T

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Target: scaffold0395 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 6480 - 6312
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatct-cattgaaataaatctggatacgactccagcatcttgctctccaa 171  Q
    ||||||||||||| ||||||| |||||||  |||| ||||||||||| | || || ||   ||| || |||||||| ||||| |||||||| |||||||     
T  6480 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaattttaccttcaagcaaacaactctggataagactcaagcatcttactctccag 6382  T
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||||    
T  6381 ctcccaagtcaaactttcacccgttactcctccccaaacaaccttcactagaggtatatccttgcctctc 6312  T

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Target: scaffold0114 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 32242 - 32141
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| ||||||| |||||| ||||| | |||| ||||||| |||| ||| | ||||||  ||||||||||| ||||||||||||||||||||||||    
T  32242 tctggataagactccatcatcttactctctagctcccacgtcaagcttttaccagtcgctccgtcccaaacgactctcacaagaggtatctccttgcctc 32143  T
Q  240 tc 241  Q
    ||    
T  32142 tc 32141  T

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Target: scaffold0114; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 35847 - 35944
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  35847 tctggataagaatcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 35944  T

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Target: scaffold0114; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 43313 - 43394
Alignment:
Q  156 gcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||||| ||||||| |||||| |||||||||||||| | || |||  ||||||||||| ||||||| ||||| ||||||||    
T  43313 gcatcttactctccagctcctaagtcaaactttcaccagtcgttccgtcccaaacgactctcacaaggggtatttccttgcc 43394  T

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Target: scaffold0114; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 19916 - 20011
Alignment:
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||| || ||| ||||||| ||||||| |||| |  ||||||||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||||    
T  19916 tggataagaatcccgcatcttactctccagctcccaattcaaactttcaccagtcgctccgtcccaaacgactctcacaaggggtatttccttgcc 20011  T

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Target: scaffold1032 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 2445 - 2278
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||||| |    
T  2445 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactcaggataagactcctgcatcttactctccagc 2347  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  2346 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 2278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 3011 - 2844
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| | |||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  3011 tagggcgttacaactctccccaacttagagaattt-catcctcgaaatcttacctcaaacaaacaactctggatacgactcccgcatcttactctccagc 2913  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||| ||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  2912 tcccaagtcaaactttcacaggtgactccaccccaaacaaccttcactagaggtatatccttgcctctc 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 19709 - 19876
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||| ||| |||||||  |||| |||||||||||   || |||| | ||| || ||||||||||||||  ||||||| ||||||| |    
T  19709 tagggcgttacaactcttcccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggatacgactctcgcatcttactctccagc 19807  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  19808 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 19876  T

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Target: scaffold0235 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 22256 - 22089
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   |||||| || |||||||||||| ||||||| ||||||| |    
T  22256 tagggcgttacaaatctccccaacttagagaattt-cgtcctcgaaatcttacctcaagcaaataactccggatacgactcccgcatcttactctccagc 22158  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||  |||||||| || ||||| |||||||| ||||||||||||    
T  22157 tcccaagtcaaactctcaccggttactcgaccccaaacaaccttcactagaggtatatccttgcctctc 22089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 14831 - 14664
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||| ||||   || |||| |  || || ||||||||||||||| ||||||| ||||||| |    
T  14831 tagggcgttacaactctccccaacttagagaattt-cgtccttgaaatcttacctcaattgaacaactctggatacgactcccgcatcttactctccagc 14733  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  14732 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 14664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 9457 - 9290
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||| ||||   || |||| |  || || ||||||||||||||| ||||||| ||||||| |    
T  9457 tagggcgttacaactctccccaacttagagaattt-cgtccttgaaatcttacctcaattgaacaactctggatacgactcccgcatcttactctccagc 9359  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || ||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  9358 tcccaagttaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 9290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 45570 - 45737
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| | ||| || | ||||||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  45570 tagggcgttacaactctccccaaatta-aagaatttcgtcctcgaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagc 45668  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| | |||||| ||||||||||||    
T  45669 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactaaaggtatatccttgcctctc 45737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 10614 - 10781
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||| ||| |||||||  |||| |||||||||||   || |||| | ||| || ||||||||||||||  ||||||| ||||||| |    
T  10614 tagggcgttacaactcttcccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggatacgactctcgcatcttactctccagc 10712  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  10713 tcccaagtcaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 972 - 812
Alignment:
Q  80 ttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacg 179  Q
    |||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || |||||||| |||||| ||||||| ||||||| |||| | |    
T  972 ttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggataagactcccgcatcttactctccagctcccaag 874  T
Q  180 tcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||| ||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  873 tcaaactctcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 26445 - 26278
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||||||||||||| ||||||| ||||||| |    
T  26445 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaaacaaacaactctggatacgactcccgcatcttactctccagc 26347  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | | |||||| |||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  26346 tcccaagacaaactctcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 26278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 16470 - 16569
Alignment:
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||||| ||||||| ||||||| |||| | || |||||||| || | |||||| |||||||||||| |||||||||||||||| || ||||||    
T  16470 tggatacgactcccgcatcttactctccagctcccaagtaaaactttctccagtcgctccaccccaaacgactctcacaagaggtatctctttacctctc 16569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 135845 - 136012
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||||||| | ||||||||||||||| |    
T  135845 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaagcaaacaactccggatacgactgccgcatcttgctctccagc 135943  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||||||||| |   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  135944 tcccaagtcaaactttcaccagttactccaccccaaacaaccttcactagaggtatatccttgcctctc 136012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 11686 - 11644
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  11686 ctaaactcaataaaataaataaataataaaatagggcgttaca 11644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 26059 - 26154
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| |||||||||| | |||||||||||||||| || ||||||    
T  26059 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacgaatctcacaagaggtatctctttacctctc 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 36727 - 36793
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacga 212  Q
    ||||||||| ||||||| ||||||| |||| | |||||||||||||| | |||||| ||||||||||    
T  36727 tacgactcccgcatcttactctccagctcccaagtcaaactttcaccagtcgctccaccccaaacga 36793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 484 - 566
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaat-gacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| |||||||||| ||||||||| |||||  |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  484 acacatcacaattattcaaataaattatacaaaaaagacactaaactcgataaaatatttaaataataaaatagggcgttaca 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 6769 - 6870
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||||||||||| ||||| | |||  |||| ||||||||||| ||| ||||  || |||| |||||||||||||||||||| |||||||    
T  6769 tctggataagactccagcatcttactctctagctctcacgttaaactttcaccagccactccgtcctaaacaactttcacaagaggtatctctttgcctc 6868  T
Q  240 tc 241  Q
    ||    
T  6869 tc 6870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 6142 - 6258
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| ||||| || |||||||||||| ||||| || ||||   ||| || |||||||| |||||||||||||| ||||| | |||    
T  6142 gggcgttacaactctccccaacttataagattttcgtcctcaaaaatttacctcaagcaaacaactctggataagactccagcatcttactctctagctc 6241  T
Q  175 ctacgtcaaactttcac 191  Q
    | ||||||| |||||||    
T  6242 ccacgtcaagctttcac 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 1149 - 1316
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||| ||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||||| |    
T  1149 tagggcgttacaactctccccaacttggagaattt-cgtcctcgaaatattacctcaagcaaacaactccggataagactcccgcatcttactctccagc 1247  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  1248 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatgtccttgcctctc 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 34257 - 34090
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || ||||| ||||||||| ||||||| || |||| |    
T  34257 tagggcgttacaactctccccaacttagaggattt-cgtcctcgaaatcttacctcaaacaaacaactctgggtacgactcccgcatcttactttccagc 34159  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || |||||||| || | |||||| |||||||||||| ||||||| |||||||| || ||||||    
T  34158 tcccaagttaaactttctccagtcgctccaccccaaacgactctcacaagcggtatctctttacctctc 34090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 2956 - 3032
Alignment:
Q  164 ctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    |||||||||||| |||| || |||||||| | ||||||| |||||| ||||||||||||||||||||| ||||||||    
T  2956 ctctccaactcccacgttaagctttcaccagtcgctccttcccaaatgactttcacaagaggtatctctttgcctct 3032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 2891 - 2947
Alignment:
Q  74 agggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcat 130  Q
    |||||||||||| ||||||| ||||| |  |||||||||||||||||| || |||||    
T  2891 agggcgttacaactctccccaacttaaagaattttcgtcctcgaaaatatacctcat 2947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 60820 - 60653
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   | | || |||||||| |||||| ||||||| || |||| |    
T  60820 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcatacaactctggataagactcccgcatcttactttccagc 60722  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  60721 tcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 60653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 36994 - 37094
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||||| ||||||| |||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||||    
T  36994 tctggataagactcccgcatcttactctccagctcccatgtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcctc 37093  T
Q  240 t 240  Q
    |    
T  37094 t 37094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 22537 - 22614
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| |||||| || |||||| |||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  22537 ctaaactcaataaaagaaataaatattaaaatagggcgttacaactctaccccccttaaaagaatttcgtcctcgaaa 22614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 26698 - 26735
Alignment:
Q  204 cccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  26698 cccaaacgactctcacaagaggtatctccttgcttctc 26735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 3780 - 3681
Alignment:
Q  142 tggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||||||||||| ||||||| ||||||| |||| | ||||||||||||||||   |||| |||||||| || ||||| |||||||| || |||||||||    
T  3780 tggatacgactcccgcatcttactctccagctcccaagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatcattgcctctc 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 11319 - 11153
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    |||| |||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || |||||||| |||||||||||||| ||||||| |    
T  11319 taggacgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactctggataagactccagcatcttactctccagc 11221  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
    ||| | ||||||| |||||  |  |||||||||||||| ||||| || |||| ||||||||| |||||    
T  11220 tcccatgtcaaacattcactagatgctcctccccaaacaacttttactagagatatctccttacctct 11153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 36958 - 36831
Alignment:
Q  42 ctaaactcgataaa-ataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaat 140  Q
    |||||||| ||||| ||||  ||||||| || ||||||||||||| ||||||| ||||| |  |||||||||||||||||| || ||||   ||| || |    
T  36958 ctaaactctataaatataatcaaataatcaaatagggcgttacaactctccccaacttataggattttcgtcctcgaaaatttacctcaagcaaacaact 36859  T
Q  141 ctggatacgactccagcatcttgctctc 168  Q
    ||||||| |||||||||||||| |||||    
T  36858 ctggataagactccagcatcttactctc 36831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 148321 - 148432
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |    
T  148321 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagc 148419  T
Q  173 tcctacgtcaaac 185  Q
    ||| | |||||||    
T  148420 tcccaagtcaaac 148432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 196264 - 196097
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||  | |||||  ||||| ||||||||||   || |||| | ||| || ||||||||||| ||| ||||||| ||||||| |    
T  196264 tagggcgttacaactctccctaatttagagaatttt-gtcctcgaaatcttacctcaatcaaacaactctggatacgaatcccgcatcttactctccagc 196166  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | |||||||| ||||| |   |||| |||||||| || ||||  |||||||| ||||||||||||    
T  196165 tcccaagtcaaactctcaccagttactccaccccaaacaaccttcagtagaggtatatccttgcctctc 196097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 7550 - 7449
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| ||||||| |||||| ||||||| |||| | |||||||||||||| |   ||||||||||||| || ||||| |||| ||| ||||||||||    
T  7550 tctggataagactccaacatcttactctccagctcccatgtcaaactttcacctgttactcctccccaaacaaccttcactagagttatatccttgcctc 7451  T
Q  240 tc 241  Q
    ||    
T  7450 tc 7449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 7782 - 7689
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctc 168  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||| ||  ||||  ||| || |||||||| |||||||||||||| |||||    
T  7782 gggcgttacaactctccccaacttataagattttcgtcctcgaaaatttacttcatgcaaacaactctggataagactccagcatcttactctc 7689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 7665 - 7629
Alignment:
Q  205 ccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7665 ccaaacgactctcacaagaggtatctccttgcctctc 7629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 52443 - 52279
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| |||| || |||||||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||||| |    
T  52443 tagggcgttacaactctctccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactcaggataagactcctgcatcttactctccagc 52345  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcct 238  Q
    ||| | ||||||||||||||||   | ||||||||||| || ||||| |||||||| |||||||||    
T  52344 tcccaagtcaaactttcaccggttacacctccccaaacaaccttcactagaggtatatccttgcct 52279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 240
Target Start/End: Original strand, 9527 - 9690
Alignment:
Q  76 ggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcc 175  Q
    |||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || ||||| |||||| ||||||| ||||||| ||||    
T  9527 ggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactccggataagactcccgcatcttactctccagctcc 9625  T
Q  176 tacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctct 240  Q
     | ||||||||||||||||   || | |||||||| || ||||| |||||||| |||||||||||    
T  9626 caagtcaaactttcaccggttacttcgccccaaacaaccttcactagaggtatatccttgcctct 9690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 241
Target Start/End: Original strand, 13812 - 13979
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   |  |||||  ||| || ||  |||| |||| | ||||||| ||||||| |    
T  13812 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatatttcctcatgcaaacaactcatgataagacttctgcatcttactctccagc 13910  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||||||   | ||||||||||| || ||||| |||||||| ||||||||||||    
T  13911 tcccaagtcaaactttcaccggttacacctccccaaacaaccttcactagaggtatatccttgcctctc 13979  T

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Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 5367 - 5311
Alignment:
Q  3 acacatcgcaattattcacataaattattcaaaatgacactaaactcgataaaataa 59  Q
    ||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  5367 acacatcacaattattcaaataaattatacaaaaagacactaaactcgataaaataa 5311  T

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Target: scaffold0483 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 10666 - 10496
Alignment:
Q  70 aattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctcc 169  Q
    |||||||||||||||| ||||||| |||||||  || | |||||||||||   || ||||   ||| || || |||||||| ||  ||||||| || |||    
T  10666 aattagggcgttacaactctccccaacttagagaatat-cgtcctcgaaatcttacctcaaacaaacaactcaggatacgattcttgcatcttactttcc 10568  T
Q  170 aactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    | |||| | |||||||||||||| | || ||| |||||||| ||| |||||||||||||||| || ||||||    
T  10567 agctcccatgtcaaactttcaccagtcgatccaccccaaacaactctcacaagaggtatctctttacctctc 10496  T

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Target: scaffold0878 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 3288 - 3202
Alignment:
Q  33 aaaatgacactaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||| ||||||| | ||||||||||| || | ||| ||||||||||    
T  3288 aaaaagactctaaactcaataaaataaataaataataaaatagggtgttacaactatcccccacttaaaagaattttgtcctcgaaa 3202  T

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Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 46922 - 47020
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| |||||| ||||||| ||||||| ||||   ||||||||||||||||   |||| |||||||| || ||||| |||||||| ||||||||||||    
T  46922 ggataagactcccgcatcttactctccagctcccgagtcaaactttcaccggttactccaccccaaacaaccttcactagaggtatatccttgcctctc 47020  T

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Target: scaffold1550 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1550
Description:

Target: scaffold1550; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 121 - 4
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||| | ||| || |||||||||||||||||| || ||||   ||| || |||||||| || ||||||||||| ||||| | |||    
T  121 gggcgttacaactctccccaaattataagattttcgtcctcgaaaatttacctcaagcaaacaactctggataagattccagcatcttactctctagctc 22  T
Q  175 ctacgtcaaactttcacc 192  Q
    | |||| || ||||||||    
T  21 ccacgttaagctttcacc 4  T

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Target: scaffold0216 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 7720 - 7608
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatc 141  Q
    ||||||||||| ||||||| || |||| ||   ||||||||||| ||||||||||||| || |||||||||||||||||| || ||||   ||| || ||    
T  7720 ctaaactcgattaaataac-aattaattaaagtgggcgttacaactctcccccacttaaaagattttcgtcctcgaaaatttacctcaagcaaacaactc 7622  T
Q  142 tggatacgactcca 155  Q
    |||||| |||||||    
T  7621 tggataagactcca 7608  T

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Target: scaffold0207 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 12851 - 12774
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||| ||||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  12851 ctaaactcaataaaataaataaatgataaaatagggcgttacaactctaccccccttaaaagaatttcgtcctcgaaa 12774  T

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Target: scaffold0156 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 27018 - 27119
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||||| ||||||| |||| | ||||||||||||||||   |||| | |||||| || ||||| ||| |||| ||||||||||    
T  27018 tctggataagactcccgcatcttactctccagctcccaagtcaaactttcaccggttactccactccaaacaaccttcactagaagtatatccttgcctc 27117  T
Q  240 tc 241  Q
    ||    
T  27118 tc 27119  T

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Target: scaffold0104 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 320 - 421
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| |||||| ||||||| || |||| |||| | || ||||||||||  | |||||| | |||||||||| |||||||||||||||| || ||||    
T  320 tctggataagactcccgcatcttactttccagctcccaagttaaactttcactagtcgctccactccaaacgactctcacaagaggtatctcattacctc 419  T
Q  240 tc 241  Q
    ||    
T  420 tc 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 3935 - 3768
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||  ||||| ||||||| ||||||| |    
T  3935 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactcaggataaaactcccgcatcttactctccagc 3837  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||| |    |||| |||||||| || ||||| |||||||| ||||||||||||    
T  3836 tcccaagtcaaactttcactgattactccaccccaaacaaccttcactagaggtatatccttgcctctc 3768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 19117 - 18950
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||   || ||||   ||| || || |||||  ||||| ||||||| ||||||| |    
T  19117 tagggcgttacaactctccccaacttagagaattt-cgtcctcgaaatattacctcaagcaaacaactcaggataaaactcccgcatcttactctccagc 19019  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | ||||||||||||| |    |||| |||||||| || ||||| |||||||| ||||||||||||    
T  19018 tcccaagtcaaactttcactgattactccaccccaaacaaccttcactagaggtatatccttgcctctc 18950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 13769 - 13602
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||||  |||| |||| ||||||   || ||||   ||| || |||||||| |||||| ||||||| ||||||| |    
T  13769 tagggcgttacaactctccccaacttagagaattt-cgtcgtcgaaatattacctcaagcaaacaactctggataagactcccgcatcttactctccagc 13671  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||| | || ||||||||||| |   |||| |||||||| || ||||| ||| |||| ||||||||||||    
T  13670 tcccaagttaaactttcaccagttactccaccccaaacaaccttcactagatgtatatccttgcctctc 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 32836 - 32793
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  32836 ctaaactcaataaaataaataaataataaaatagggcgttacaa 32793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 35051 - 34979
Alignment:
Q  79 gttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgact 152  Q
    ||||||| ||||||||||||| |  |||||||||||||||||| || || |  |||||||||||||||| ||||    
T  35051 gttacaactctcccccacttaaacaattttcgtcctcgaaaattta-ctgaaggaaataaatctggataggact 34979  T

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Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 124923 - 124815
Alignment:
Q  75 gggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactc 174  Q
    ||||||||||| ||||||||||||| || |||||||||||| ||||| || ||||   ||| |  | |||||| |||||||||||||| ||||| | |||    
T  124923 gggcgttacaactctcccccacttaaaagattttcgtcctcaaaaatttacctcaagcaaacatctatggataagactccagcatcttactctcaagctc 124824  T
Q  175 ctacgtcaa 183  Q
    | |||||||    
T  124823 ccacgtcaa 124815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 112357 - 112452
Alignment:
Q  146 tacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||||||| |||||||| |||||||||||| | || | ||||||||| |  ||||| |||||||| ||| | |||||||||||||| || ||||||    
T  112357 tacgactctagcatcttactctccaactcccaagttagactttcaccagttgctccaccccaaacaactcttacaagaggtatctctttacctctc 112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 117335 - 117274
Alignment:
Q  180 tcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| |||||||| | ||||||   |||||||||| |||| |||||||||||||||||||||    
T  117335 tcaagctttcaccagtcgctcccgtccaaacgactctcacgagaggtatctccttgcctctc 117274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 38200 - 38129
Alignment:
Q  14 ttattcacataaattattc-aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| | |||| | ||||||||| |||||||||| ||||||||||| ||||||||||||    
T  38200 ttattcaaataaattataccaaaaaggcactaaacttgataaaataaataaataataaaatagggcgttaca 38129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 330 - 268
Alignment:
Q  167 tccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatc 229  Q
    ||||||||| |||| || |||||||| | ||||||| |||||||||||||||||||| |||||    
T  330 tccaactcccacgttaagctttcaccagtcgctccttcccaaacgactttcacaagatgtatc 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 10616 - 10710
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctcctt 234  Q
    |||||||| || |||  |||||| |||||||||||| | |||||||||||||| | ||||||  |||||| |||| ||||||| ||||| |||||    
T  10616 tctggataagaatcccacatcttactctccaactcccaagtcaaactttcaccagtcgctccgtcccaaaagactctcacaaggggtatttcctt 10710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 39840 - 39794
Alignment:
Q  38 gacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  39840 gacactaaactctataaaataaataaataataaaatagggcgttaca 39794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 27245 - 27408
Alignment:
Q  73 tagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaac 172  Q
    ||||||||||||| ||||||| |||||| | | |||||||  |||||   ||||||| | ||| || ||||||||||||||  | ||||| ||||| | |    
T  27245 tagggcgttacaactctccccaacttag-agaatttcgtctccgaaatcttatctcaatcaaacaactctggatacgactctcgaatcttactctctagc 27343  T
Q  173 tcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||| | |||||||| |||||||   |||| ||||| || |  ||||| |||||||| ||||||||    
T  27344 tcccaagtcaaactctcaccggttactccaccccagacaatcttcactagaggtatatccttgcc 27408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 77642 - 77600
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  77642 ctaaactcgataaaataaataaataataaaatagggcgttaca 77600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 4653 - 4552
Alignment:
Q  140 tctggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctc 239  Q
    |||||||| || ||| ||||||| ||||||| |||| | |||||||| ||||| |   | ||||||||||| || ||||| |||||||| ||||||||||    
T  4653 tctggataagaatcccgcatcttactctccagctcccaagtcaaactctcaccagttacacctccccaaacaaccttcactagaggtatatccttgcctc 4554  T
Q  240 tc 241  Q
    ||    
T  4553 tc 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 8321 - 8245
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| ||||||||||| ||| ||||||||| ||| |||| |||| || | ||||||||||||||    
T  8321 ctaaactcaataaaataaataaataataaaatagagcgttacaactctacccc-cttaaaagaatttcgtcctcgaaa 8245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 3500 - 3572
Alignment:
Q  14 ttattcacataaattattc--aaaatgacactaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||| ||||||||| |  |||| | |||||||||||||||||||| ||||||||||| | ||||||||||    
T  3500 ttattcaaataaattataccaaaaaaggcactaaactcgataaaataaataaataataaaattgggcgttaca 3572  T

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Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 17817 - 17748
Alignment:
Q  172 ctcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    |||| ||||||| |||||||| | ||||||  ||||||||||| |||| ||||||| |||||||||||||    
T  17817 ctcccacgtcaagctttcaccagtcgctccctcccaaacgactctcacgagaggtaactccttgcctctc 17748  T

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Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 10441 - 10364
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaatgtatctcat 130  Q
    |||||||  ||||||| || ||||||||||||| ||||||| ||||| |  |||||| |||||||||||||| |||||    
T  10441 aaaataatcaaataattaaatagggcgttacaactctccccaacttatagaattttcatcctcgaaaatgtacctcat 10364  T

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Target: scaffold0385 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 852 - 904
Alignment:
Q  33 aaaatgaca-ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||    
T  852 aaaatgacatctaaactcaataaaataaataaataataaaatagggcgttaca 904  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 9390 - 9346
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  9390 ctaaactcaataaaataaataaataataaaatagggcgttacaat 9346  T

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Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 96176 - 96256
Alignment:
Q  157 catcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    |||||| || |||| |||| | |||||||||||||| | |||||| |||||||||||| |||| |  ||||| ||||||||    
T  96176 catcttactttccagctcccaagtcaaactttcaccagtcgctccgccccaaacgactctcaccaagggtatttccttgcc 96256  T

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Target: scaffold1160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 911 - 954
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  911 ctaaactcaataaaataaataaataataaaatagggcgttacaa 954  T

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Target: scaffold0853 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 326 - 283
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  326 ctaaactcaataaaataaataaataataaaatagggcgttacaa 283  T

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Target: scaffold0682 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 1 - 84
Alignment:
Q  158 atcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcctctc 241  Q
    ||||| || |||| |||| | |||||||||||||| | |||||| |||||||| ||| | |||||||||||||| || ||||||    
T  1 atcttactttccagctcccaagtcaaactttcaccagtcgctccaccccaaacaactcttacaagaggtatctctttacctctc 84  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 2254 - 2179
Alignment:
Q  44 aaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||| ||||||||| |||||||| ||  |||||||||||| ||| |||| |||| || | ||||||||||||||    
T  2254 aaactctataaaataattaaataattaaagagggcgttacaactctaccccccttaaaagaatttcgtcctcgaaa 2179  T

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Target: scaffold0241 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 3799 - 3865
Alignment:
Q  52 taaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||||| ||||||||||||| ||| |||| |||| || | ||||||||||||||    
T  3799 taaaataaataaataataaaatagggcgttacaactctacccc-cttaaaagaatttcgtcctcgaaa 3865  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 16881 - 16838
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  16881 ctaaactcaataaaataaataaataataaaatagggcgttacaa 16838  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 19860 - 19903
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaa 85  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  19860 ctaaactcaataaaataaataaataataaaatagggcgttacaa 19903  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 15623 - 15702
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    |||||||| | ||||||| |||||||| ||  |||||||||||| |||||||| |||| |  ||||||||||| ||||||    
T  15623 ctaaactctagaaaataagtaaataattaaagagggcgttacaactctcccccgcttatagaattttcgtccttgaaaat 15702  T

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Target: scaffold0600 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 1204 - 1298
Alignment:
Q  143 ggatacgactccagcatcttgctctccaactcctacgtcaaactttcaccggccgctcctccccaaacgactttcacaagaggtatctccttgcc 237  Q
    ||||| |||||| | ||| | ||||||| |||| | |||||||||||||| |   ||||||||||||| || ||||| |||||||| ||||||||    
T  1204 ggataagactcccgtatcctactctccagctcccaagtcaaactttcaccagttactcctccccaaacaaccttcactagaggtatatccttgcc 1298  T

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Target: scaffold0550 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 5287 - 5245
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  5287 ctaaactcaataaaataaataaataataaaatagggcgttaca 5245  T

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Target: scaffold0429 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 1685 - 1607
Alignment:
Q  43 taaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    ||||||| |||||||||   |||||| || ||||| ||||||| ||||||| ||||| |  ||||||||||||||||||    
T  1685 taaactcaataaaataatctaataattaaatagggtgttacaactctccccaacttatagaattttcgtcctcgaaaat 1607  T

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Target: scaffold0414 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 10461 - 10419
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  10461 ctaaactcaataaaataaataaataataaaatagggcgttaca 10419  T

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Target: scaffold0407 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 4323 - 4281
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  4323 ctaaactcaataaaataaataaataataaaatagggcgttaca 4281  T

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Target: scaffold0407; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 10789 - 10747
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  10789 ctaaactcaataaaataaataaataataaaatagggcgttaca 10747  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 63094 - 63136
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttaca 84  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  63094 ctaaactcaataaaataaataaataataaaatagggcgttaca 63136  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 168146 - 168220
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcg 116  Q
    |||||||| ||||||||| ||||||||||| |||||||||| || ||| |||| |||| || | |||||| ||||    
T  168146 ctaaactcaataaaataaataaataataaaatagggcgttaaaactctaccccccttaaaagaatttcgttctcg 168220  T

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Target: scaffold0577 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 9425 - 9501
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| |||||||| ||  |||||||||||| ||| |||| |||| || | ||||||||||||||    
T  9425 ctaaactctataaaataattaaataattaaagagggcgttacaactctacccc-cttaaaagaatttcgtcctcgaaa 9501  T

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Target: scaffold0447 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 12825 - 12902
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| |||||||| ||  |||||||||||| ||| ||||  ||| || | ||||||||||||||    
T  12825 ctaaactctataaaataattaaataattaaagagggcgttacaactctacccccattaaaagaatttcgtcctcgaaa 12902  T

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Target: scaffold0383 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 10820 - 10897
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaa 119  Q
    |||||||| ||||||||| |||||||| ||  |||||||||||| ||| ||||  ||| || | ||||||||||||||    
T  10820 ctaaactctataaaataattaaataattaaagagggcgttacaactctacccccattaaaagaatttcgtcctcgaaa 10897  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 8651 - 8736
Alignment:
Q  106 tttcgtcctcgaaaatgtatctcattgaaataaatctggatacgactccagcatcttgctctccaactcctacgtcaaactttcac 191  Q
    ||||||||||||||   || |||| | ||| || ||||||||||||||| ||||||| ||||||| |||| | || ||||||||||    
T  8651 tttcgtcctcgaaatcttacctcaatcaaacaactctggatacgactcccgcatcttactctccagctcccaagttaaactttcac 8736  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 35161 - 35108
Alignment:
Q  34 aaatgacactaaactcgataaaataactaaataa-taaattagggcgttacaat 86  Q
    ||||||| |||||||| ||||||||| ||||||| |||| ||||||||||||||    
T  35161 aaatgactctaaactcaataaaataattaaataaataaaatagggcgttacaat 35108  T

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Target: scaffold0609 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 991 - 1058
Alignment:
Q  53 aaaataactaaataataaattagggcgttacaattctcccccacttagaatattttcgtcctcgaaaat 121  Q
    |||||||  ||||||||| |||||||||||||| ||||||| ||||| |  ||||||||| ||||||||    
T  991 aaaataataaaataataa-ttagggcgttacaactctccccaacttaaagaattttcgtcttcgaaaat 1058  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 2189 - 2145
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||    
T  2189 ctaaactcaataaaataaataaatattaaaatagggcgttacaat 2145  T

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Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 8617 - 8573
Alignment:
Q  42 ctaaactcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||    
T  8617 ctaaactcaataaaataaataaatattaaaatagggcgttacaat 8573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 18179 - 18139
Alignment:
Q  46 actcgataaaataactaaataataaattagggcgttacaat 86  Q
    |||| ||||||||| ||||||||||| ||||||||||||||    
T  18179 actcaataaaataaataaataataaaatagggcgttacaat 18139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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