View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1194_high_1 (Length: 524)

Name: NF1194_high_1
Description: NF1194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1194_high_1
NF1194_high_1
[»] chr7 (63 HSPs)
chr7 (8-274)||(22501458-22501725)
chr7 (148-283)||(816190-816326)
chr7 (148-283)||(1907359-1907495)
chr7 (148-283)||(22486398-22486534)
chr7 (148-282)||(1842898-1843033)
chr7 (148-282)||(24605842-24605977)
chr7 (156-284)||(21917332-21917461)
chr7 (319-494)||(22501721-22501890)
chr7 (148-284)||(31425509-31425646)
chr7 (156-283)||(23232051-23232179)
chr7 (154-282)||(20923958-20924087)
chr7 (148-283)||(18217833-18217969)
chr7 (148-283)||(23750735-23750871)
chr7 (144-282)||(38057632-38057771)
chr7 (148-282)||(39979624-39979759)
chr7 (148-282)||(40847435-40847570)
chr7 (156-282)||(47523650-47523777)
chr7 (153-282)||(4514774-4514904)
chr7 (148-283)||(2457674-2457808)
chr7 (156-283)||(15969796-15969925)
chr7 (156-284)||(27806030-27806159)
chr7 (148-280)||(32267351-32267483)
chr7 (148-252)||(10050867-10050971)
chr7 (148-283)||(23577188-23577324)
chr7 (153-283)||(3872186-3872317)
chr7 (148-282)||(9698538-9698673)
chr7 (148-282)||(11036511-11036646)
chr7 (156-282)||(15014405-15014532)
chr7 (148-282)||(20429469-20429604)
chr7 (156-282)||(28800890-28801017)
chr7 (153-282)||(3904478-3904608)
chr7 (154-283)||(21623031-21623160)
chr7 (156-284)||(7733310-7733439)
chr7 (157-273)||(11852021-11852138)
chr7 (163-283)||(23539251-23539372)
chr7 (169-284)||(27304895-27305011)
chr7 (148-252)||(31042255-31042359)
chr7 (149-283)||(6849210-6849345)
chr7 (148-282)||(20174024-20174159)
chr7 (148-282)||(37135285-37135420)
chr7 (148-265)||(36636510-36636628)
chr7 (163-282)||(2650828-2650948)
chr7 (168-282)||(48933160-48933275)
chr7 (153-282)||(1824200-1824330)
chr7 (144-283)||(25777111-25777251)
chr7 (148-281)||(24140454-24140588)
chr7 (153-282)||(26577274-26577404)
chr7 (154-282)||(23699825-23699954)
chr7 (158-282)||(33427704-33427828)
chr7 (148-283)||(10222629-10222764)
chr7 (148-252)||(11890178-11890282)
chr7 (148-252)||(45664772-45664876)
chr7 (144-282)||(27130334-27130471)
chr7 (154-282)||(14786635-14786764)
chr7 (154-282)||(36993830-36993959)
chr7 (153-284)||(2093360-2093492)
chr7 (156-282)||(42926419-42926547)
chr7 (153-283)||(1821995-1822123)
chr7 (148-283)||(21871576-21871708)
chr7 (148-281)||(27132722-27132856)
chr7 (176-241)||(1841824-1841889)
chr7 (157-203)||(5235420-5235466)
chr7 (144-232)||(15330256-15330344)
[»] chr4 (60 HSPs)
chr4 (149-283)||(19839182-19839317)
chr4 (148-282)||(22128312-22128447)
chr4 (148-282)||(32175737-32175872)
chr4 (148-282)||(1638449-1638584)
chr4 (154-283)||(8878891-8879021)
chr4 (149-284)||(36689680-36689816)
chr4 (148-282)||(55309212-55309348)
chr4 (148-282)||(5473851-5473986)
chr4 (148-282)||(27040025-27040160)
chr4 (148-278)||(38223512-38223643)
chr4 (153-283)||(38645757-38645888)
chr4 (148-282)||(45532579-45532714)
chr4 (148-282)||(46286229-46286364)
chr4 (153-282)||(4606829-4606959)
chr4 (154-282)||(4586758-4586887)
chr4 (163-283)||(9058951-9059072)
chr4 (153-284)||(9239279-9239411)
chr4 (148-283)||(33914061-33914197)
chr4 (153-283)||(9670478-9670609)
chr4 (148-282)||(9913260-9913395)
chr4 (148-282)||(13564915-13565050)
chr4 (144-282)||(19680424-19680563)
chr4 (153-282)||(38619854-38619984)
chr4 (148-284)||(5399611-5399748)
chr4 (154-282)||(25026565-25026694)
chr4 (148-272)||(25147723-25147848)
chr4 (148-275)||(18051841-18051969)
chr4 (156-282)||(22168278-22168405)
chr4 (148-282)||(30268988-30269123)
chr4 (148-282)||(30283066-30283201)
chr4 (164-281)||(24682328-24682446)
chr4 (154-282)||(13028816-13028945)
chr4 (154-282)||(16915377-16915506)
chr4 (154-282)||(18714910-18715039)
chr4 (156-282)||(2275677-2275805)
chr4 (153-284)||(7111944-7112076)
chr4 (156-252)||(22156632-22156728)
chr4 (153-284)||(29625332-29625464)
chr4 (145-209)||(37761916-37761980)
chr4 (144-282)||(44783480-44783620)
chr4 (163-284)||(9238623-9238745)
chr4 (153-282)||(30507994-30508124)
chr4 (148-277)||(37378628-37378758)
chr4 (153-284)||(12105990-12106121)
chr4 (144-282)||(25225097-25225234)
chr4 (154-283)||(54539294-54539424)
chr4 (148-252)||(18744101-18744205)
chr4 (154-281)||(29238431-29238559)
chr4 (153-252)||(14944753-14944852)
chr4 (148-282)||(30420033-30420168)
chr4 (154-252)||(30568030-30568128)
chr4 (163-252)||(313604-313693)
chr4 (157-284)||(3613006-3613135)
chr4 (154-281)||(4627079-4627207)
chr4 (153-252)||(34557190-34557289)
chr4 (153-252)||(6553811-6553910)
chr4 (153-283)||(42055404-42055535)
chr4 (154-209)||(45091282-45091337)
chr4 (148-275)||(39234944-39235071)
chr4 (156-282)||(12071972-12072099)
[»] chr3 (86 HSPs)
chr3 (148-284)||(27449088-27449225)
chr3 (153-282)||(5565727-5565857)
chr3 (154-283)||(48404866-48404996)
chr3 (148-284)||(19610338-19610475)
chr3 (148-283)||(5260937-5261073)
chr3 (148-252)||(28389973-28390077)
chr3 (148-283)||(36543749-36543885)
chr3 (148-282)||(11219138-11219273)
chr3 (157-283)||(21020074-21020201)
chr3 (148-282)||(23217208-23217343)
chr3 (153-282)||(13921330-13921460)
chr3 (148-283)||(7623530-7623666)
chr3 (153-284)||(26098818-26098950)
chr3 (148-282)||(8110339-8110474)
chr3 (148-282)||(19269864-19269999)
chr3 (156-282)||(25882578-25882705)
chr3 (154-283)||(29236050-29236180)
chr3 (153-282)||(46012728-46012858)
chr3 (148-284)||(11007681-11007818)
chr3 (154-282)||(21816727-21816856)
chr3 (148-284)||(31250088-31250225)
chr3 (148-283)||(19223449-19223585)
chr3 (154-281)||(27968921-27969049)
chr3 (148-283)||(29215992-29216128)
chr3 (148-283)||(36564438-36564574)
chr3 (148-282)||(16299861-16299996)
chr3 (156-282)||(18091547-18091674)
chr3 (148-282)||(18104530-18104665)
chr3 (153-282)||(21088757-21088885)
chr3 (148-282)||(30219338-30219473)
chr3 (148-282)||(46942487-46942622)
chr3 (148-281)||(11915758-11915892)
chr3 (153-282)||(13905038-13905168)
chr3 (153-282)||(15063992-15064122)
chr3 (148-284)||(26830439-26830577)
chr3 (144-285)||(29956368-29956510)
chr3 (144-285)||(30005523-30005665)
chr3 (148-282)||(1310959-1311094)
chr3 (148-279)||(1628215-1628347)
chr3 (153-284)||(3461308-3461440)
chr3 (148-275)||(4393357-4393485)
chr3 (163-282)||(10941665-10941785)
chr3 (148-252)||(17582332-17582436)
chr3 (148-252)||(27212812-27212916)
chr3 (148-282)||(9652578-9652713)
chr3 (148-266)||(20615359-20615478)
chr3 (153-283)||(23773482-23773613)
chr3 (148-282)||(49915451-49915586)
chr3 (153-282)||(1745488-1745617)
chr3 (153-282)||(43329763-43329893)
chr3 (156-284)||(8428179-8428308)
chr3 (148-284)||(15490035-15490171)
chr3 (148-275)||(18539804-18539932)
chr3 (148-252)||(19545510-19545614)
chr3 (163-282)||(26390634-26390754)
chr3 (144-282)||(11837214-11837353)
chr3 (156-282)||(17762650-17762777)
chr3 (156-282)||(19063970-19064097)
chr3 (188-282)||(20761950-20762045)
chr3 (148-282)||(31433737-31433872)
chr3 (153-282)||(5744421-5744551)
chr3 (153-282)||(5781380-5781510)
chr3 (153-282)||(21490034-21490164)
chr3 (154-282)||(11085342-11085471)
chr3 (168-282)||(8546265-8546380)
chr3 (149-282)||(10803721-10803856)
chr3 (153-252)||(28859596-28859695)
chr3 (153-282)||(17269604-17269734)
chr3 (144-277)||(26963254-26963388)
chr3 (148-273)||(29704041-29704167)
chr3 (153-282)||(50665636-50665766)
chr3 (153-284)||(6088226-6088358)
chr3 (154-284)||(29451100-29451232)
chr3 (148-282)||(8543469-8543603)
chr3 (174-283)||(37283549-37283659)
chr3 (154-283)||(47263264-47263394)
chr3 (163-252)||(6718725-6718814)
chr3 (153-282)||(10772053-10772184)
chr3 (153-252)||(50240751-50240850)
chr3 (153-254)||(27711197-27711298)
chr3 (148-283)||(18380024-18380160)
chr3 (153-232)||(23233214-23233293)
chr3 (154-236)||(20088406-20088488)
chr3 (154-203)||(35579605-35579654)
chr3 (185-287)||(6447241-6447344)
chr3 (160-282)||(13615427-13615550)
[»] chr8 (64 HSPs)
chr8 (153-284)||(32247916-32248048)
chr8 (148-282)||(3823135-3823270)
chr8 (148-284)||(17824614-17824751)
chr8 (154-282)||(19256220-19256349)
chr8 (148-284)||(29345073-29345210)
chr8 (148-284)||(8555302-8555439)
chr8 (153-284)||(26399005-26399137)
chr8 (154-282)||(11938753-11938881)
chr8 (154-282)||(15251610-15251738)
chr8 (148-282)||(4330980-4331115)
chr8 (148-282)||(17103865-17104000)
chr8 (148-282)||(19240869-19241004)
chr8 (148-282)||(19314053-19314188)
chr8 (156-282)||(24576024-24576151)
chr8 (156-282)||(27869248-27869375)
chr8 (148-280)||(37992101-37992234)
chr8 (154-284)||(5670167-5670298)
chr8 (153-283)||(25273327-25273457)
chr8 (148-282)||(43431559-43431694)
chr8 (153-282)||(19488061-19488191)
chr8 (153-282)||(23752286-23752416)
chr8 (154-282)||(24636660-24636790)
chr8 (163-284)||(27910762-27910884)
chr8 (163-284)||(27957181-27957303)
chr8 (156-284)||(17810308-17810437)
chr8 (156-283)||(22939323-22939451)
chr8 (163-282)||(25655858-25655978)
chr8 (153-284)||(31399506-31399638)
chr8 (148-282)||(21350480-21350615)
chr8 (156-282)||(33652577-33652704)
chr8 (154-283)||(24193195-24193325)
chr8 (153-282)||(30687943-30688073)
chr8 (163-283)||(16061938-16062059)
chr8 (154-282)||(30466954-30467083)
chr8 (163-282)||(18010060-18010180)
chr8 (156-282)||(6816383-6816510)
chr8 (148-282)||(40289421-40289555)
chr8 (153-282)||(13060931-13061061)
chr8 (154-282)||(4647755-4647884)
chr8 (154-282)||(25000431-25000560)
chr8 (153-284)||(8824832-8824964)
chr8 (148-280)||(9915043-9915175)
chr8 (156-283)||(29350933-29351062)
chr8 (148-283)||(6817056-6817192)
chr8 (148-283)||(31344171-31344307)
chr8 (149-282)||(6084246-6084378)
chr8 (148-282)||(17003264-17003399)
chr8 (148-282)||(18844544-18844679)
chr8 (148-282)||(32961661-32961796)
chr8 (179-284)||(8789873-8789979)
chr8 (153-282)||(10917834-10917964)
chr8 (176-250)||(19493688-19493762)
chr8 (166-282)||(21219240-21219357)
chr8 (149-282)||(9631406-9631541)
chr8 (158-282)||(33412977-33413095)
chr8 (203-283)||(25274654-25274735)
chr8 (148-244)||(5879206-5879302)
chr8 (163-252)||(15289661-15289748)
chr8 (163-252)||(15470030-15470117)
chr8 (187-283)||(2265378-2265474)
chr8 (156-207)||(24479874-24479925)
chr8 (148-207)||(29473376-29473435)
chr8 (153-252)||(41527731-41527830)
chr8 (148-236)||(3692218-3692306)
[»] chr6 (75 HSPs)
chr6 (148-283)||(9892967-9893103)
chr6 (148-282)||(28364915-28365050)
chr6 (148-282)||(12680186-12680319)
chr6 (148-264)||(12845007-12845124)
chr6 (148-283)||(12351585-12351721)
chr6 (148-283)||(14886565-14886701)
chr6 (148-282)||(12951712-12951847)
chr6 (148-282)||(15364458-15364593)
chr6 (148-282)||(22579349-22579484)
chr6 (152-284)||(9885251-9885384)
chr6 (148-283)||(495626-495762)
chr6 (156-283)||(6598476-6598604)
chr6 (148-279)||(25398006-25398138)
chr6 (163-281)||(5360428-5360547)
chr6 (148-278)||(12157380-12157511)
chr6 (148-282)||(22083842-22083977)
chr6 (156-282)||(24661009-24661136)
chr6 (148-283)||(21691494-21691631)
chr6 (156-284)||(2992627-2992756)
chr6 (154-282)||(15448395-15448524)
chr6 (148-283)||(18033525-18033660)
chr6 (148-279)||(21140943-21141075)
chr6 (156-283)||(26224440-26224568)
chr6 (148-282)||(2669313-2669448)
chr6 (148-282)||(21990175-21990309)
chr6 (148-284)||(20182149-20182286)
chr6 (148-284)||(22153705-22153842)
chr6 (154-282)||(30833960-30834089)
chr6 (167-282)||(1939242-1939358)
chr6 (156-282)||(11049751-11049878)
chr6 (153-279)||(11077658-11077785)
chr6 (154-284)||(16250800-16250931)
chr6 (156-282)||(33250708-33250835)
chr6 (153-282)||(15961407-15961537)
chr6 (153-276)||(5192195-5192319)
chr6 (153-284)||(6605494-6605626)
chr6 (148-283)||(18048792-18048928)
chr6 (156-282)||(12200706-12200833)
chr6 (164-282)||(18492389-18492508)
chr6 (149-252)||(23281791-23281894)
chr6 (156-282)||(26939599-26939726)
chr6 (154-275)||(9060101-9060222)
chr6 (156-281)||(27796835-27796961)
chr6 (158-282)||(6065451-6065576)
chr6 (153-284)||(12499225-12499358)
chr6 (153-284)||(12506554-12506687)
chr6 (153-284)||(12509543-12509676)
chr6 (148-252)||(27705426-27705530)
chr6 (148-282)||(11530229-11530364)
chr6 (153-252)||(33547555-33547654)
chr6 (153-282)||(28668109-28668239)
chr6 (148-276)||(12205191-12205320)
chr6 (167-282)||(6978300-6978416)
chr6 (153-276)||(20692817-20692941)
chr6 (148-282)||(12160847-12160981)
chr6 (153-279)||(14872128-14872255)
chr6 (148-252)||(343594-343698)
chr6 (148-252)||(16118150-16118254)
chr6 (148-252)||(11431670-11431775)
chr6 (172-282)||(15509184-15509295)
chr6 (153-223)||(13145011-13145081)
chr6 (148-252)||(5270396-5270501)
chr6 (148-209)||(14036624-14036685)
chr6 (174-282)||(14772691-14772800)
chr6 (201-284)||(9878513-9878596)
chr6 (158-282)||(30745719-30745842)
chr6 (163-283)||(17919555-17919676)
chr6 (148-272)||(22055622-22055747)
chr6 (200-282)||(8844168-8844252)
chr6 (154-206)||(13668071-13668123)
chr6 (150-252)||(2396209-2396312)
chr6 (163-252)||(10929527-10929617)
chr6 (153-281)||(10458773-10458902)
chr6 (153-285)||(11350191-11350321)
chr6 (158-223)||(19175837-19175902)
[»] chr5 (60 HSPs)
chr5 (148-283)||(27428011-27428147)
chr5 (144-282)||(2472714-2472853)
chr5 (156-282)||(16121839-16121966)
chr5 (148-282)||(17039631-17039766)
chr5 (148-282)||(33818561-33818696)
chr5 (153-282)||(746868-746998)
chr5 (153-282)||(40484053-40484183)
chr5 (154-282)||(13620127-13620256)
chr5 (153-284)||(38837669-38837801)
chr5 (156-282)||(618306-618433)
chr5 (148-282)||(7888801-7888936)
chr5 (144-282)||(35620344-35620482)
chr5 (153-282)||(25397788-25397918)
chr5 (155-282)||(17036412-17036540)
chr5 (148-282)||(12045731-12045866)
chr5 (148-282)||(20959512-20959647)
chr5 (148-282)||(36196398-36196533)
chr5 (153-282)||(10494746-10494876)
chr5 (154-283)||(26708584-26708714)
chr5 (154-283)||(26978318-26978448)
chr5 (154-286)||(8108856-8108989)
chr5 (144-282)||(5982645-5982785)
chr5 (148-282)||(8886851-8886986)
chr5 (148-282)||(10420252-10420387)
chr5 (148-282)||(11927786-11927921)
chr5 (144-282)||(28265475-28265614)
chr5 (148-282)||(36716200-36716335)
chr5 (153-282)||(16631874-16632004)
chr5 (148-273)||(23975639-23975765)
chr5 (154-282)||(23423756-23423885)
chr5 (154-282)||(24138841-24138970)
chr5 (153-284)||(4125186-4125318)
chr5 (148-252)||(17079409-17079513)
chr5 (156-282)||(12328226-12328353)
chr5 (148-282)||(15060977-15061112)
chr5 (148-282)||(25673229-25673363)
chr5 (154-272)||(32726736-32726855)
chr5 (153-279)||(35778150-35778277)
chr5 (148-284)||(36831888-36832025)
chr5 (148-282)||(7003730-7003863)
chr5 (148-282)||(23408984-23409120)
chr5 (148-283)||(25652582-25652718)
chr5 (152-272)||(3080706-3080827)
chr5 (148-284)||(20187939-20188076)
chr5 (154-281)||(16472182-16472310)
chr5 (156-282)||(23974576-23974703)
chr5 (144-206)||(22649406-22649468)
chr5 (168-281)||(33734974-33735088)
chr5 (153-281)||(17771969-17772098)
chr5 (148-252)||(33816789-33816893)
chr5 (148-282)||(13974078-13974213)
chr5 (156-282)||(17986741-17986868)
chr5 (153-283)||(36597339-36597470)
chr5 (159-236)||(31853135-31853212)
chr5 (148-252)||(18413560-18413664)
chr5 (160-249)||(26301919-26302008)
chr5 (148-197)||(29727932-29727981)
chr5 (154-252)||(5043542-5043640)
chr5 (153-186)||(19345284-19345317)
chr5 (153-252)||(9024222-9024322)
[»] chr2 (57 HSPs)
chr2 (148-283)||(41637618-41637754)
chr2 (154-282)||(37552233-37552362)
chr2 (167-283)||(22140363-22140480)
chr2 (149-281)||(28319580-28319713)
chr2 (148-283)||(30783338-30783474)
chr2 (148-283)||(41736172-41736308)
chr2 (148-282)||(13788055-13788190)
chr2 (148-282)||(29749403-29749538)
chr2 (153-282)||(43408511-43408641)
chr2 (154-282)||(12779606-12779735)
chr2 (148-284)||(21293709-21293846)
chr2 (148-275)||(32300451-32300579)
chr2 (154-283)||(26687689-26687820)
chr2 (144-282)||(27327612-27327751)
chr2 (154-284)||(37723990-37724121)
chr2 (148-284)||(15636733-15636870)
chr2 (148-282)||(32008952-32009088)
chr2 (148-283)||(37802378-37802513)
chr2 (152-283)||(40018806-40018938)
chr2 (148-282)||(8430296-8430431)
chr2 (148-282)||(20065074-20065209)
chr2 (156-282)||(28841342-28841469)
chr2 (148-282)||(31266354-31266489)
chr2 (153-283)||(44476374-44476505)
chr2 (153-282)||(7093573-7093703)
chr2 (157-282)||(13613093-13613219)
chr2 (153-282)||(26243321-26243451)
chr2 (154-282)||(23857958-23858086)
chr2 (148-275)||(1141536-1141664)
chr2 (154-272)||(18916411-18916529)
chr2 (148-282)||(32185832-32185967)
chr2 (148-281)||(23388379-23388513)
chr2 (168-265)||(35697475-35697573)
chr2 (156-283)||(18551252-18551380)
chr2 (156-282)||(14757121-14757248)
chr2 (156-282)||(36550844-36550970)
chr2 (156-282)||(44722940-44723067)
chr2 (148-279)||(28262364-28262496)
chr2 (148-236)||(29998606-29998694)
chr2 (153-270)||(8763639-8763757)
chr2 (156-221)||(27523019-27523084)
chr2 (153-277)||(38362276-38362401)
chr2 (148-252)||(13134651-13134755)
chr2 (188-283)||(27039907-27040003)
chr2 (148-282)||(2556095-2556230)
chr2 (148-282)||(36373900-36374033)
chr2 (217-283)||(22192248-22192315)
chr2 (148-284)||(9004306-9004443)
chr2 (154-282)||(18609520-18609649)
chr2 (148-272)||(44366007-44366132)
chr2 (163-252)||(31966556-31966644)
chr2 (148-192)||(27058407-27058451)
chr2 (201-283)||(16098916-16098999)
chr2 (148-191)||(16098996-16099039)
chr2 (148-265)||(9590470-9590588)
chr2 (148-197)||(24117315-24117364)
chr2 (155-191)||(37786373-37786409)
[»] chr1 (77 HSPs)
chr1 (156-283)||(12720821-12720949)
chr1 (151-282)||(50845330-50845462)
chr1 (148-282)||(14760871-14761006)
chr1 (156-282)||(45839304-45839431)
chr1 (148-283)||(29549422-29549558)
chr1 (148-282)||(38531170-38531305)
chr1 (156-282)||(41752445-41752572)
chr1 (148-282)||(46865247-46865382)
chr1 (148-282)||(52183682-52183817)
chr1 (153-282)||(46790009-46790139)
chr1 (156-284)||(9109973-9110102)
chr1 (156-282)||(6459229-6459356)
chr1 (148-282)||(18894900-18895035)
chr1 (148-282)||(19081732-19081867)
chr1 (148-282)||(19129620-19129755)
chr1 (148-282)||(41063201-41063336)
chr1 (154-276)||(46785964-46786087)
chr1 (153-282)||(19865253-19865383)
chr1 (153-282)||(28229455-28229585)
chr1 (154-282)||(4340417-4340546)
chr1 (148-283)||(20408159-20408295)
chr1 (148-251)||(13522993-13523096)
chr1 (148-278)||(16258490-16258621)
chr1 (148-278)||(16913581-16913712)
chr1 (148-282)||(22603552-22603687)
chr1 (148-281)||(9259184-9259318)
chr1 (148-284)||(17661054-17661191)
chr1 (154-282)||(41120737-41120866)
chr1 (148-283)||(7830035-7830171)
chr1 (148-283)||(9985326-9985462)
chr1 (148-283)||(12989856-12989992)
chr1 (148-283)||(13102320-13102456)
chr1 (148-252)||(41071866-41071970)
chr1 (156-282)||(6412053-6412180)
chr1 (153-283)||(8940993-8941124)
chr1 (148-282)||(15243089-15243224)
chr1 (148-285)||(22158806-22158944)
chr1 (145-282)||(46339445-46339583)
chr1 (157-277)||(26825253-26825374)
chr1 (148-272)||(30928388-30928513)
chr1 (153-285)||(39748942-39749075)
chr1 (163-283)||(48522537-48522658)
chr1 (148-252)||(9464107-9464211)
chr1 (148-283)||(12161818-12161954)
chr1 (148-252)||(22789622-22789726)
chr1 (148-282)||(23457901-23458036)
chr1 (144-282)||(51973424-51973563)
chr1 (148-233)||(14486683-14486767)
chr1 (164-282)||(7181555-7181674)
chr1 (148-282)||(13195587-13195722)
chr1 (148-281)||(17733954-17734089)
chr1 (157-282)||(20580922-20581049)
chr1 (175-281)||(25787998-25788105)
chr1 (157-282)||(11917799-11917924)
chr1 (154-283)||(50092297-50092427)
chr1 (154-282)||(9177110-9177239)
chr1 (148-275)||(18890556-18890684)
chr1 (183-282)||(27253855-27253955)
chr1 (176-250)||(41359020-41359094)
chr1 (144-272)||(6775887-6776015)
chr1 (156-252)||(12174797-12174893)
chr1 (148-282)||(18787913-18788045)
chr1 (148-252)||(32046880-32046984)
chr1 (148-282)||(12369951-12370076)
chr1 (153-283)||(13308819-13308950)
chr1 (148-282)||(17200010-17200145)
chr1 (148-282)||(29093554-29093689)
chr1 (168-283)||(12806835-12806952)
chr1 (154-282)||(20290321-20290449)
chr1 (153-252)||(9882071-9882167)
chr1 (153-250)||(49881053-49881150)
chr1 (148-252)||(52621158-52621262)
chr1 (152-192)||(30673502-30673542)
chr1 (157-188)||(39040867-39040898)
chr1 (154-220)||(6091319-6091385)
chr1 (154-208)||(25687355-25687409)
chr1 (149-206)||(25034431-25034488)
[»] scaffold0007 (3 HSPs)
scaffold0007 (148-283)||(202778-202914)
scaffold0007 (148-282)||(3746-3881)
scaffold0007 (148-209)||(276208-276269)
[»] scaffold0576 (1 HSPs)
scaffold0576 (148-282)||(9229-9364)
[»] scaffold0076 (1 HSPs)
scaffold0076 (156-282)||(26495-26622)
[»] scaffold0603 (1 HSPs)
scaffold0603 (148-282)||(5979-6114)
[»] scaffold0219 (1 HSPs)
scaffold0219 (156-282)||(19615-19742)
[»] scaffold0014 (1 HSPs)
scaffold0014 (154-283)||(22221-22351)
[»] scaffold0047 (1 HSPs)
scaffold0047 (148-283)||(58586-58722)
[»] scaffold0087 (1 HSPs)
scaffold0087 (148-284)||(37785-37922)
[»] scaffold0062 (1 HSPs)
scaffold0062 (148-282)||(43921-44056)
[»] scaffold0006 (2 HSPs)
scaffold0006 (148-282)||(120987-121122)
scaffold0006 (153-278)||(84678-84804)
[»] scaffold0001 (3 HSPs)
scaffold0001 (156-282)||(8110-8237)
scaffold0001 (156-282)||(21842-21969)
scaffold0001 (148-282)||(84307-84442)
[»] scaffold0599 (1 HSPs)
scaffold0599 (148-281)||(7509-7643)
[»] scaffold0240 (1 HSPs)
scaffold0240 (154-282)||(14990-15119)
[»] scaffold0128 (1 HSPs)
scaffold0128 (154-282)||(10663-10792)
[»] scaffold0009 (3 HSPs)
scaffold0009 (153-281)||(182539-182668)
scaffold0009 (156-282)||(219648-219775)
scaffold0009 (153-282)||(215663-215786)
[»] scaffold0717 (1 HSPs)
scaffold0717 (156-282)||(918-1046)
[»] scaffold0108 (1 HSPs)
scaffold0108 (148-282)||(12657-12791)
[»] scaffold0069 (1 HSPs)
scaffold0069 (148-282)||(10162-10297)
[»] scaffold0058 (1 HSPs)
scaffold0058 (148-282)||(74541-74676)
[»] scaffold0019 (1 HSPs)
scaffold0019 (156-283)||(173456-173585)
[»] scaffold0184 (1 HSPs)
scaffold0184 (144-279)||(7456-7592)
[»] scaffold0655 (1 HSPs)
scaffold0655 (162-282)||(3162-3283)
[»] scaffold0035 (1 HSPs)
scaffold0035 (156-279)||(74720-74845)
[»] scaffold0023 (1 HSPs)
scaffold0023 (163-282)||(39703-39823)
[»] scaffold0002 (1 HSPs)
scaffold0002 (153-282)||(439972-440102)
[»] scaffold0024 (1 HSPs)
scaffold0024 (148-208)||(112332-112392)
[»] scaffold0161 (1 HSPs)
scaffold0161 (154-279)||(6805-6931)
[»] scaffold0284 (1 HSPs)
scaffold0284 (153-252)||(1550-1649)
[»] scaffold0502 (1 HSPs)
scaffold0502 (148-272)||(10896-11021)
[»] scaffold0011 (1 HSPs)
scaffold0011 (199-282)||(17617-17701)
[»] scaffold0211 (1 HSPs)
scaffold0211 (153-252)||(19169-19268)
[»] scaffold0114 (1 HSPs)
scaffold0114 (153-252)||(36311-36410)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 4e-76; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 22501458 - 22501725
Alignment:
Q  8 caccacagacaaacatcacaagaagtcaggaacaaggccgacccactcattaaaatcgaaccatgccaactccactcggtaactagcaattctagtagaa 107  Q
    |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||  | ||||||||||||| |||||||    
T  22501458 caccacagacaaacatcacaagaagttaggaacacggccgaccaactcattaaaatcgaaccatgccaactccacctgataactagcaattccagtagaa 22501557  T
Q  108 gactggttcgaccatccactactnnnnnnnnnnnnnttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttg 207  Q
    || |||||| ||||||||||||              ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22501558 gattggttcaaccatccactaccaaaaaaccaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttg 22501657  T
Q  208 cggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttc 274  Q
    |||||||||||||||| | |||||||||| ||||||||||||| || | ||||||||||||| |||||    
T  22501658 cggccaaagaatttgtgaaagattttattttttccgtcactaattttcatccttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 816326 - 816190
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||||||||||    
T  816326 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtcac 816227  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||| ||| |||| |||||| ||||||||    
T  816226 taatttccctccctaaatttgttttttccagtagtga 816190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 1907359 - 1907495
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||| ||| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| ||| || ||||||||| ||||||||||    
T  1907359 tgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcac 1907458  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||| ||||||||||    
T  1907459 taatttccctcgctaattttgcttttcctagtagtga 1907495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 22486398 - 22486534
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  22486398 tgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 22486497  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  22486498 taatttccctcgctaattttgctttttctagtagtga 22486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 1842898 - 1843033
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  1842998 taatttccctcgttaattttgctttttctagtagtg 1843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 24605842 - 24605977
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||    
T  24605842 tgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 24605941  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  | ||||| |||||||||||||||    
T  24605942 taatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 21917461 - 21917332
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  21917461 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 21917362  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||||||||||||||||||||||    
T  21917361 ctcactaattttgctttttctagtagtgat 21917332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 494
Target Start/End: Original strand, 22501721 - 22501890
Alignment:
Q  319 ttttccaagaaatgatattaatatattcactaacttaaaatttttgttgatttattttctagataatgttattaaaatttcaatatnnnnnnnnncaggt 418  Q
    ||||||||||||||||| ||   |||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||         |||||    
T  22501721 ttttccaagaaatgatagta---tattcactgacttgaaattttagttgatttattttctagctaatgttattaaaatttcaatat---aaaaaacaggt 22501814  T
Q  419 tgttaaccataaagaattaatcgaaaggagagattaagatgtggaagctgaatttttcatcagaaggtgaagatga 494  Q
    |||| |  | |||||||||||| || ||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  22501815 tgttcattagaaagaattaatctaagggagagattaaaatgtggaagctgaagttttcatcaaaaggtgaagatga 22501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 31425646 - 31425509
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||| ||  |||| ||| ||||||||||    
T  31425646 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtcac 31425547  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  ||||||||||||||||| |||||||    
T  31425546 taatttccctcgctaattttgctttttctaatagtgat 31425509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 23232051 - 23232179
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| ||||    
T  23232051 atttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 23232150  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
    |||  ||||||||||||||||||||||||    
T  23232151 ctctctaattttgctttttctagtagtga 23232179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 20924087 - 20923958
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| ||||||||| | ||||  ||||||| |||||||||||| ||||| ||||||| ||    
T  20924087 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaattt 20923988  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||| |||||||||||||||    
T  20923987 ccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 18217833 - 18217969
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  18217833 tgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 18217932  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  18217933 taatttccctcgctaattttgctttttctagtagtga 18217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 23750871 - 23750735
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||| |||||||| || |||| |||||||| ||| |||| ||| ||||||||||    
T  23750871 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtcac 23750772  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  |||||||| |||||||||||||||    
T  23750771 taatttccctcgctaattttgttttttctagtagtga 23750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 38057632 - 38057771
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||||||| ||  |||||||| |||||     
T  38057632 ttaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttcca 38057731  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||||||| || |||| || |||||||||||| ||||||||    
T  38057732 tcactaattttcctcgttgattttgctttttgtagtagtg 38057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 39979759 - 39979624
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  39979759 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 39979660  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||||||||| ||| |||||    
T  39979659 aaatttccctccctaattttgcttttcctaatagtg 39979624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 40847570 - 40847435
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| |   |||||||  ||||||||||    
T  40847570 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcac 40847471  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||| ||||| |||||||||    
T  40847470 aaatttccctccctaattttacttttcctagtagtg 40847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 47523777 - 47523650
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| ||||    
T  47523777 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 47523678  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||  ||||||||||||||    
T  47523677 ctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 4514774 - 4514904
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||  |||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||| |||||||  |||||||||| || |    
T  4514774 aaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatt 4514873  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||||||||||||| |||||||||    
T  4514874 tccctccctaattttgcttttcctagtagtg 4514904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 2457674 - 2457808
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||| | |||||||||| ||||||||||||| |||||||||| ||||||||||| | |||||||||||  ||||||||||  |||| |||||    
T  2457674 tgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgt--gagattttatattttctgtcac 2457771  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||| ||||||||||||| ||||| ||||    
T  2457772 taatttccctccctaattttgcttttcctagtggtga 2457808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 15969796 - 15969925
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaat-tc 253  Q
    |||||| |||||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||||| ||| |||| | || |||||||||||||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  254 cctccttaattttgctttttctagtagtga 283  Q
    |||| |||||||| ||||||||||||||||    
T  15969896 cctcattaattttactttttctagtagtga 15969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 27806030 - 27806159
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||||| || |    
T  27806030 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaattttc 27806129  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||||||||||||||||||||||    
T  27806130 ctcgctaattttgctttttctagtagtgat 27806159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 32267351 - 32267483
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||  |||  ||||||| || ||||||||| ||||||||||    
T  32267351 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttatt-tttccgtcac 32267449  T
Q  248 taat-tccctccttaattttgctttttctagtag 280  Q
    |||| ||||||| ||||||||| |||||||||||    
T  32267450 taatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 10050971 - 10050867
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||||    
T  10050971 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcac 10050872  T
Q  248 taatt 252  Q
    |||||    
T  10050871 taatt 10050867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 23577324 - 23577188
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  23577324 tgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 23577225  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| ||| |||  | ||||| ||||||||||||||||    
T  23577224 taatttctctcgctgatttttctttttctagtagtga 23577188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 3872317 - 3872186
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||| ||||||||| | |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  3872317 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatt 3872218  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||||||||||||||||||    
T  3872217 tccctcgctaattttgctttttctagtagtga 3872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 9698673 - 9698538
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||  | |||| |||||||| |   |||| ||||||||||||||    
T  9698673 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcac 9698574  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  9698573 taatttccctcgctaattttgctttttctagtagtg 9698538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 11036511 - 11036646
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  11036511 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 11036610  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||   |||||||||||||||||||||||    
T  11036611 taatttcccttgctaattttgctttttctagtagtg 11036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 15014532 - 15014405
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| | || |||||||| ||  |||||||| |||||||||| || ||||    
T  15014532 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcaccaatttcc 15014433  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||| |||||||||||||||    
T  15014432 ctcgctaattttactttttctagtagtg 15014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 20429469 - 20429604
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||| || |||   ||||||| ||  |||| ||| ||||||||||    
T  20429469 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtcac 20429568  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||  ||||||||||||||||||||||||    
T  20429569 taatttcccttgttaattttgctttttctagtagtg 20429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 28800890 - 28801017
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| |||| |||||||| ||||    
T  28800890 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtcactaatttcc 28800989  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  28800990 ctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 3904608 - 3904478
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||  ||  |||| ||| ||||||||||||| |    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatt 3904509  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  3904508 tccctcgctaattttgctttttctagtagtg 3904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 21623031 - 21623160
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  | ||||||||||||||||||||||    
T  21623131 ccctcgct-attttgctttttctagtagtga 21623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 7733439 - 7733310
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||| ||||| |||||||||||||||||||||||  ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  7733439 atttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 7733340  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||| ||||||||||||||||||    
T  7733339 ctcgctaatttcgctttttctagtagtgat 7733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 11852021 - 11852138
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccc 255  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||| | ||||||||||||| ||| |||||||| |||| ||||| || ||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  256 tccttaattttgcttttt 273  Q
    ||| ||||||||||||||    
T  11852121 tccctaattttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 23539251 - 23539372
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| | |  |||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  23539251 gagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 23539350  T
Q  262 attttgctttttctagtagtga 283  Q
    ||||||||||||||||||||||    
T  23539351 attttgctttttctagtagtga 23539372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 27304895 - 27305011
Alignment:
Q  169 aaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttg 267  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||  | ||||||||| |||| |||||||| |||||||| ||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  268 ctttttctagtagtgat 284  Q
     |||| ||||| |||||    
T  27304995 tttttcctagttgtgat 27305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 31042255 - 31042359
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||| ||| |||||||| ||||| | ||    
T  31042255 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccataac 31042354  T
Q  248 taatt 252  Q
    |||||    
T  31042355 taatt 31042359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 283
Target Start/End: Complemental strand, 6849345 - 6849210
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    |||| |||||||| |||| ||||||| ||||| |||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| | |||||||||    
T  6849345 gagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcact 6849246  T
Q  249 aa-ttccctccttaattttgctttttctagtagtga 283  Q
    || |||||||  ||||||||||||||||||||||||    
T  6849245 aatttccctcgctaattttgctttttctagtagtga 6849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 20174024 - 20174159
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  20174024 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 20174123  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||||||||| || ||||||    
T  20174124 taatttccctcgctaattttgcttttcctggtagtg 20174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 37135420 - 37135285
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||| || |||  |||||| | ||  |||| ||| ||||||||||    
T  37135420 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtcac 37135321  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  37135320 taatttccctcactaattttgttttttctagtagtg 37135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 36636510 - 36636628
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  36636510 tgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 36636609  T
Q  248 taa-ttccctccttaattt 265  Q
     || |||||||| ||||||    
T  36636610 aaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 2650948 - 2650828
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aattccctcctta 261  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||| |||||||||  ||    
T  2650948 gagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcacta 2650849  T
Q  262 attttgctttttctagtagtg 282  Q
    ||||| |||||||||||||||    
T  2650848 atttttctttttctagtagtg 2650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 48933160 - 48933275
Alignment:
Q  168 aaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaatttt 266  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||  |||||||| ||  |||||||| ||||||||||||| || ||||  |||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  267 gctttttctagtagtg 282  Q
    |||||||||| |||||    
T  48933260 gctttttctaatagtg 48933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 1824330 - 1824200
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||  |||||| ||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||||||  |||||||||| || |    
T  1824330 aaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatt 1824231  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||||||||||||| |||||||||    
T  1824230 tccctccctaattttgcttttcctagtagtg 1824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 283
Target Start/End: Complemental strand, 25777251 - 25777111
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| | ||| |||||||| ||  |||| ||||||| || ||||||||| | |  |    
T  25777251 ttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattgg 25777152  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||||||| || | ||| ||||||| | ||||||||||||||    
T  25777151 tcactaattttcttccctaattttaccttttctagtagtga 25777111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 24140454 - 24140588
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| | |||||| |||| |||||||||| |||||||| || ||||||||||||| ||  |||||||  ||||||||||    
T  24140454 tgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtcac 24140553  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
     || || ||||| ||||||| ||||| ||||||||    
T  24140554 aaattttcctccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 26577274 - 26577404
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta-at 251  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||| ||||||||||| |||| |||||||| ||  |||||||  |||||||||| |  |    
T  26577274 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtt 26577373  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||| | ||||||||||||| | |||||||    
T  26577374 tcccttcctaattttgcttttcccagtagtg 26577404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 23699954 - 23699825
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | ||||||||| ||||||||||||| |||||| |||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  23699954 aaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 23699855  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||| |||||||||||||||    
T  23699854 ccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 33427704 - 33427828
Alignment:
Q  158 ttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccct 256  Q
    |||| |||||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||||| ||  |||| ||| |||  |||||||| ||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatt-ttttggtcactaatttccct 33427802  T
Q  257 ccttaattttgctttttctagtagtg 282  Q
    |  |||||||| ||||||||||||||    
T  33427803 cgctaattttgttttttctagtagtg 33427828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 10222764 - 10222629
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| ||||||||||||  |||||||| ||||||||||||||||| |||| |||||||||||  |||| ||||| | ||| |||||| | |||| |||||    
T  10222764 tgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa-aatttatgagaaattttactttttctgtcac 10222666  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||| ||||| || |||||||||||||||    
T  10222665 taattttcctccctaattatgttttttctagtagtga 10222629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 11890282 - 11890178
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||  ||| ||||||| |||| | ||||| ||||||||| | ||||||||||| | || ||||||||| ||||||||||    
T  11890282 tgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtcac 11890183  T
Q  248 taatt 252  Q
    |||||    
T  11890182 taatt 11890178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 45664772 - 45664876
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||  ||| |||||||| ||  |||| ||| |||| |||||    
T  45664772 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtcac 45664871  T
Q  248 taatt 252  Q
    |||||    
T  45664872 taatt 45664876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 27130334 - 27130471
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||||||||| ||| |||||||   || |||||||| ||  |||||||  |||||     
T  27130334 ttaatgagggaaatttagagagggaaaatgtgaaatcc--ctctaattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttcca 27130431  T
Q  244 tcact-aattccctccttaattttgctttttctagtagtg 282  Q
    ||||| | ||| |||   ||||||||||||||||||||||    
T  27130432 tcactgatttctctctcgaattttgctttttctagtagtg 27130471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 14786764 - 14786635
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||  |||||||||||| |||| ||| | ||||||||||| ||||||||||| ||||| ||||||| ||  |||| ||| |||| |||||||| ||    
T  14786764 aaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattt 14786665  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
     ||||  |||||||| |||||||| |||||    
T  14786664 tcctcactaattttgttttttctaatagtg 14786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 36993830 - 36993959
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||| ||||| ||||||| || ||||||||||||| |||||||| || | ||  ||||||| ||  |||||||  ||||| |||| || ||    
T  36993830 aaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaattt 36993929  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||||||||| |||||||||    
T  36993930 ccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 2093492 - 2093360
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||| |||||||| ||  ||||   ||| | ||  |||| ||| ||||||||||||| |    
T  2093492 aaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatt 2093393  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  | ||||| |||||||||||||||||    
T  2093392 tccctcgctgatttttctttttctagtagtgat 2093360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 42926547 - 42926419
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaa-ttc 253  Q
    |||||| |||| ||||| |||||||||||||||||||||||| ||||||||||| | ||  ||||||| ||  |||| | || ||||||||||||| ||     
T  42926547 atttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgtcactaatttt 42926448  T
Q  254 cctccttaattttgctttttctagtagtg 282  Q
    ||||  |||||||  ||||||||||||||    
T  42926447 cctcgctaattttattttttctagtagtg 42926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 1822123 - 1821995
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||| ||||| ||||||| |||||||||||| ||||||||||||  |  | | |||||||| ||  |||||||  |||||||||||||||    
T  1822123 aaaaattagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt 1822024  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
      |||| |||||||||||||  |||||||||    
T  1822023 --ctccctaattttgcttttcatagtagtga 1821995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 21871576 - 21871708
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| ||||||||| || |||||    ||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| |||||| |||    
T  21871576 tgaggaaaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccac 21871671  T
Q  248 t-aattccctccttaattttgctttttctagtagtga 283  Q
    | | || ||||  |||||||| |||||||||||||||    
T  21871672 tgattttcctcgctaattttgttttttctagtagtga 21871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 27132856 - 27132722
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||  |||||| |||||| |||||  ||||||||||| |||| ||||||||||  | ||  ||||||| |  ||||||||| ||||||| ||    
T  27132856 tgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttac 27132757  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
     || |||||||  ||||||| ||||||||||||||    
T  27132756 caatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 1841889 - 1841824
Alignment:
Q  176 aaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttc 241  Q
    |||||||||||||||||| ||||||||||||||   ||| |||||||| || ||||||||| ||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttc 1841824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 5235466 - 5235420
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaat 203  Q
    |||| |||||| | ||||||||||||||||||||||||||| |||||    
T  5235466 tttaaagagggtagacgtgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 15330344 - 15330256
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattt 232  Q
    ||||||||| | ||||||  ||| ||||| ||||||  ||||||||||| |||| ||||||||||| ||||  ||||||| ||| ||||    
T  15330344 ttaatgagggatatttagtaaggaaaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaattt 15330256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 149 - 283
Target Start/End: Original strand, 19839182 - 19839317
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||| ||| |||||||||||    
T  19839182 gaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcact 19839281  T
Q  249 aa-ttccctccttaattttgctttttctagtagtga 283  Q
    || |||||||  ||||||||||||||||||||||||    
T  19839282 aatttccctcgctaattttgctttttctagtagtga 19839317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 22128447 - 22128312
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||    
T  22128447 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcac 22128348  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||| | |||||| ||||||||||||||    
T  22128347 taatttccctccctgattttgttttttctagtagtg 22128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 32175872 - 32175737
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||||||| ||||||||||    
T  32175872 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcac 32175773  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  32175772 taatttccctcgttaattttgctttttctagtagtg 32175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 1638449 - 1638584
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| ||||||||| ||| || ||||||||| ||||||||||    
T  1638449 tgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcac 1638548  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||| |||||||| |||| |||||||||    
T  1638549 taatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 8878891 - 8879021
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| |||| |||||| | |||||||||||| ||||||||||||| ||    
T  8878891 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaattt 8878990  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  | |||||||||||||| |||||||    
T  8878991 ccctctctgattttgctttttcttgtagtga 8879021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 36689680 - 36689816
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||| |||| ||| ||||| |||||    
T  36689680 gagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcact 36689779  T
Q  249 aa-ttccctccttaattttgctttttctagtagtgat 284  Q
    || ||||||| ||||||||| ||||||| ||||||||    
T  36689780 aatttccctcgttaattttgttttttcttgtagtgat 36689816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 55309348 - 55309212
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtca 246  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| | || |||||||||    
T  55309348 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtca 55309249  T
Q  247 ctaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| |||||||  |||||||||||||||||||||||    
T  55309248 ctaatttccctcgctaattttgctttttctagtagtg 55309212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 5473851 - 5473986
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||| |||| ||||| || ||  |||| ||| || |||||||    
T  5473851 tgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtcac 5473950  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  5473951 taatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 27040160 - 27040025
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  ||||| || ||||||||||    
T  27040160 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtcac 27040061  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  27040060 taatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 38223512 - 38223643
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||| |||| |||||||| ||  |||||||| ||||||||||    
T  38223512 tgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcac 38223611  T
Q  248 taat-tccctccttaattttgctttttctagt 278  Q
    |||| ||||||| ||||||| | |||||||||    
T  38223612 taatctccctccctaattttacattttctagt 38223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 153 - 283
Target Start/End: Original strand, 38645757 - 38645888
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||| ||| |    
T  38645757 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatt 38645856  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||||||||||||||||||    
T  38645857 tccctcgctaattttgctttttctagtagtga 38645888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 45532714 - 45532579
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||  |||  ||||||| ||  |||| ||| ||||||||||    
T  45532714 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcac 45532615  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||| |||||||||||||||||| |||||    
T  45532614 taatttccctcgttaattttgctttttctaatagtg 45532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 46286364 - 46286229
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||||||| ||||||||||    
T  46286364 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcac 46286265  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||| ||  |||||||||||||||||||||||    
T  46286264 taatttccgtcactaattttgctttttctagtagtg 46286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 4606959 - 4606829
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||| |||||||| |||||||||||||||| ||||||||||||||||  ||||||| | |||||||||| | ||||||||||| |    
T  4606959 aaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatt 4606860  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||||||| ||||| |||||||||    
T  4606859 tccctccctaattttacttttcctagtagtg 4606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 4586887 - 4586758
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||| ||  ||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  4586787 ccctcgctaattttgctttttctagtagtg 4586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 9059072 - 9058951
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||||||  |||| ||||| || |||||||| ||    
T  9059072 gagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctcccta 9058973  T
Q  262 attttgctttttctagtagtga 283  Q
    ||||||||||| ||||||||||    
T  9058972 attttgcttttcctagtagtga 9058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 9239411 - 9239279
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatt 9239312  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    |||||| |||||||| || ||||| ||||||||    
T  9239311 tccctcgttaattttactctttcttgtagtgat 9239279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 33914061 - 33914197
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||  |||||||  ||||||||||    
T  33914061 tgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcac 33914160  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||| ||||||||||||| ||||||||||    
T  33914161 aaatttccctccctaattttgcttttcctagtagtga 33914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 9670609 - 9670478
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  9670609 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 9670510  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||| ||||||||||||||||    
T  9670509 tccctcgctaatttttctttttctagtagtga 9670478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 9913260 - 9913395
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||  || |||| || ||||| ||| ||||||||||    
T  9913260 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcac 9913359  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||| |||||||  ||||||||||||||    
T  9913360 taattttcctccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 13565050 - 13564915
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||  | |||| |||||||| |   |||| ||||||||||||||    
T  13565050 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtcac 13564951  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  13564950 taatttccctcgctaattttgctttttctagtagtg 13564915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 19680563 - 19680424
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||| | |||||||||||| |||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||    
T  19680563 ttaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 19680464  T
Q  244 tcact-aattccctccttaattttgctttttctagtagtg 282  Q
    ||||| |||||||||  ||||||| |||||||||||||||    
T  19680463 tcactaaattccctcactaatttttctttttctagtagtg 19680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 38619854 - 38619984
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| | ||  |||| ||| ||||||||| ||| |    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatt 38619953  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  38619954 tccctcgctaattttgctttttctagtagtg 38619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 5399611 - 5399748
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||  |||| |||||||| ||  |||||||  ||||||||||    
T  5399611 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtcac 5399710  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
     || || ||||| ||| ||||||||| |||||||||||    
T  5399711 aaattttcctccctaagtttgcttttcctagtagtgat 5399748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 25026565 - 25026694
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||| | || |||||||| ||| |||| ||| ||||||||||||| ||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||| ||||||||| |||||    
T  25026665 ccctcactaattttactttttctaatagtg 25026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 25147723 - 25147848
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||||||  |||||||||     
T  25147723 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcat 25147822  T
Q  248 taa-ttccctccttaattttgctttt 272  Q
     || |||||||  |||||||||||||    
T  25147823 aaatttccctctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 18051841 - 18051969
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| ||    ||||||| ||| |||| ||| ||||||||||    
T  18051841 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcac 18051940  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  18051941 taatttccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 22168278 - 22168405
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||| |||||||||||||| || ||||||||||| |||| |||||| | ||  |||| ||| ||||||||||||| ||||    
T  22168278 atttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtcactaatttcc 22168377  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  22168378 ctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 30269123 - 30268988
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || ||||| |||||||||||||||| ||||||||||| ||||| ||||||  ||  |||| ||| ||||||||||    
T  30269123 tgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcac 30269024  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | |||||||  |||||||||||||||||||||||    
T  30269023 tgatttccctcgctaattttgctttttctagtagtg 30268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 30283066 - 30283201
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || ||||| |||||||||||||||| ||||||||||| ||||| ||||||  ||  |||| ||| ||||||||||    
T  30283066 tgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtcac 30283165  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | |||||||  |||||||||||||||||||||||    
T  30283166 tgatttccctcgctaattttgctttttctagtagtg 30283201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 24682446 - 24682328
Alignment:
Q  164 agggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaa 262  Q
    ||||||||||||||||||||||||||||||  || ||||||||||| |||  |||||||| ||  |||||||| ||||||||| ||| |||||||| |||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaa 24682347  T
Q  263 ttttgctttttctagtagt 281  Q
    |||| ||||||||||||||    
T  24682346 tttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 13028945 - 13028816
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||  ||| ||||||||||||| ||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
     ||||  ||| |||||||||||||||||||    
T  13028845 tcctcgctaagtttgctttttctagtagtg 13028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 16915377 - 16915506
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||  ||||||| ||||||||||  |||| ||||||||||| ||||  ||||||| |||||||||||| ||||| ||||||| ||    
T  16915377 aaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattt 16915476  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
     ||||| | |||||||||||||||||||||    
T  16915477 tcctccctgattttgctttttctagtagtg 16915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 18714910 - 18715039
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac-taatt 252  Q
    ||||||||  ||| ||||||| |||||||||||||||||||||| ||||||||| | |||| |||||||| ||  |||||||| |||||||||| || ||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||| ||||||||||||||||||    
T  18715010 ccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 2275805 - 2275677
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||  ||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  2275805 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2275706  T
Q  255 ctc-cttaattttgctttttctagtagtg 282  Q
    ||| || | ||||| ||||||||||||||    
T  2275705 ctcgctaatttttgttttttctagtagtg 2275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 7112076 - 7111944
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||| || |||||||||| ||||||||||| |||||||| || ||||  ||||||| ||  |||| ||| ||||||||||||| |    
T  7112076 aaaaattagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 7111977  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||||||||||||||    
T  7111976 tccctcgctaattttgctttttctagtagtgat 7111944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 22156728 - 22156632
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||| || |||||| |||||||||    
T  22156728 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcataatttccttcactaatt 22156632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 29625332 - 29625464
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |  |||||||| ||  |||| ||| ||||||||| ||| |    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatt 29625431  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||| || |||||||    
T  29625432 tccctcgctaattttgctttttatattagtgat 29625464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 37761980 - 37761916
Alignment:
Q  145 taatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcg 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  37761980 taatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcg 37761916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 44783480 - 44783620
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctct-ctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttcc 242  Q
    ||||||||| | |||||  || ||||||| |||||||||||| |||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| |||||    
T  44783480 ttaatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 44783579  T
Q  243 gtcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||||||| |||||||  || ||||||||||||||||||||    
T  44783580 gtcactaatttccctcgctagttttgctttttctagtagtg 44783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 9238745 - 9238623
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||||| ||||  |||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  9238745 gagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 9238646  T
Q  262 attttgctttttctagtagtgat 284  Q
    |||||||||||| ||||||||||    
T  9238645 attttgctttttttagtagtgat 9238623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 30507994 - 30508124
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac-taat 251  Q
    |||| |||| ||||||||| || |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||| ||| ||||||  | |    
T  30507994 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagatt 30508093  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||  |||||||||||||||||||||||    
T  30508094 ttcctcgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 37378758 - 37378628
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||| |||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| |||||||||     
T  37378758 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcaa 37378659  T
Q  248 taa-ttccctccttaattttgctttttctag 277  Q
    ||| || ||||  ||||||||||||||||||    
T  37378658 taattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 12105990 - 12106121
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||| |||||||||||||||||| |||| |||||| ||||||||||| | ||| |||||||| ||||| ||| ||| |    
T  12105990 aaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatt 12106088  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  ||||||| ||||||||| |||||||    
T  12106089 tccctcgctaattttactttttctaatagtgat 12106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 25225097 - 25225234
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||  |||||||||||  |||| ||||||||||||||||||||| || | |||||||||||  |||||||||||  | |||||||||  ||||||    
T  25225097 ttaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttg--acagattttatattttccg 25225194  T
Q  244 tcact-aattccctccttaattttgctttttctagtagtg 282  Q
    ||| | | |||||||| ||||||| |||||||||||||||    
T  25225195 tcattgatttccctccctaatttttctttttctagtagtg 25225234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 54539294 - 54539424
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaattc 253  Q
    |||||||| |||||||||||| ||||| |||| ||||| ||||| ||||||||||| | || |||||||| ||  |||| ||| |||||||||||||||     
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  254 -cctccttaattttgctttttctagtagtga 283  Q
     |||   ||||||||||||||||||||||||    
T  54539394 tccttgctaattttgctttttctagtagtga 54539424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 18744205 - 18744101
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||  | |||   ||||||| ||| |||| ||| ||||||||||    
T  18744205 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccgtcac 18744106  T
Q  248 taatt 252  Q
    |||||    
T  18744105 taatt 18744101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 29238431 - 29238559
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||| ||||| | ||||| || |||||||| |||| |||||||||   ||||||||||||| |||||||||||| ||||||||| ||| ||    
T  29238431 aaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataattt 29238530  T
Q  253 ccctccttaattttgctttttctagtagt 281  Q
    |||||| || ||||| |||| ||||||||    
T  29238531 ccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 14944753 - 14944852
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||| |||||||||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaatt 14944852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 30420168 - 30420033
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| ||||||||||| | |||||| |||||| ||||||||||| ||||| |||||  | || ||||  ||||||| |   |||||||| ||||||||||    
T  30420168 tgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcac 30420069  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||| |||||||||||||||||||||||    
T  30420068 taattttcctccctaattttgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 30568128 - 30568030
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||| | |||||||||||| ||||| |||||||||||||||| |||||||| || ||| ||||||||| ||  |||| ||| |||||||||||||||    
T  30568128 aaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaatt 30568030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 313604 - 313693
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||| ||| ||||||||||||||||||  || | ||||||||||| ||||||||||| | || ||||||||| |||||||||||||||    
T  313604 gagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaatt 313693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 3613006 - 3613135
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtca-ctaattcc 254  Q
    |||||||||| |||||||||||| ||||||||||| ||||| |||| |||||| |||| |||||||| || || |||| || |||  | || | ||||||    
T  3613006 tttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattcc 3613105  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||| ||||||||||||||||| |||||||    
T  3613106 ctccctaattttgctttttctaatagtgat 3613135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 4627207 - 4627079
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt- 252  Q
    |||||||| ||||||||| || ||||| |||||||||| ||||| |||||||| ||  |||  ||||||| ||  |||| ||| ||||||||| |||||     
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  253 ccctccttaattttgctttttctagtagt 281  Q
    |||||  ||||||||||||||||||||||    
T  4627107 ccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 34557190 - 34557289
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    ||||||||| ||||||||| || |||||  ||| ||||||||||| ||||||||| | |||| |||||||| |  ||||||||| |||||||||||||||    
T  34557190 aaaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaatt 34557289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 6553811 - 6553910
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||||||||||||||||  || | ||||||||||| ||||  ||||| | || ||||||||| |||||||||||||||    
T  6553811 aaaaattagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaatt 6553910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 283
Target Start/End: Original strand, 42055404 - 42055535
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac-taat 251  Q
    |||| |||| |||| |||| || ||||| ||| |||||||||| | ||||||||||| |||| |||||||| ||  |||| ||| ||| ||||||  | |    
T  42055404 aaaaattagtgaggaaaaatgtaaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatt 42055503  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||||||||||||||||||    
T  42055504 tccctcgctaattttgctttttctagtagtga 42055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 45091282 - 45091337
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcg 209  Q
    |||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcg 45091337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 39234944 - 39235071
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttat-tatttccgtca 246  Q
    ||||| ||||||||||| ||||||||||||||  ||||||||||  || | ||||||||||| ||||| ||||||| ||| ||||||| | ||||||| |    
T  39234944 tgagggaaatttagagaaggaaaacgtgaaat--ctctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgtta 39235041  T
Q  247 cta-attccctccttaattttgctttttct 275  Q
    | |  |||||||| |||||||| |||||||    
T  39235042 caagtttccctccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 12071972 - 12072099
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| || ||||||| | |||||||||||||||||||||| |||||||||||  ||| |||||| | |   |||| ||| ||||  ||||||| |||     
T  12071972 atttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatcactaatttcg 12072071  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||||||||||||| |||||    
T  12072072 ctcgctaattttgctttttctaatagtg 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 27449088 - 27449225
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||    
T  27449088 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 27449187  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  |||||||||||||||||||||||||    
T  27449188 taatttccctcgctaattttgctttttctagtagtgat 27449225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 5565727 - 5565857
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||||||||||||||||||||  |||| ||||||||||| ||||  ||||||| |||||||||||| ||||||||||||| |    
T  5565727 aaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatt 5565826  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| | |||||||||||||||||||||    
T  5565827 tccctccctgattttgctttttctagtagtg 5565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 48404866 - 48404996
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||||||||||||||||||    
T  48404966 ccctcgctaattttgctttttctagtagtga 48404996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 19610338 - 19610475
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  19610338 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 19610437  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
     || |||||||| ||||||||||||| |||||||||||    
T  19610438 aaatttccctccctaattttgcttttcctagtagtgat 19610475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 5260937 - 5261073
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  5260937 tgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 5261036  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  5261037 taatttccctcactaattttgctttttctagtagtga 5261073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 28389973 - 28390077
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||    
T  28389973 tgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcac 28390072  T
Q  248 taatt 252  Q
    |||||    
T  28390073 taatt 28390077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 36543749 - 36543885
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||| ||||| ||||    
T  36543749 tgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatcac 36543848  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||| ||||||| ||||||||||||||||    
T  36543849 taattttcctccctaatttttctttttctagtagtga 36543885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 11219138 - 11219273
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| | |  |||||||| ||| |||| ||| ||||||||||    
T  11219138 tgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtcac 11219237  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  11219238 taatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 283
Target Start/End: Original strand, 21020074 - 21020201
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccc 255  Q
    ||||| |||||||||| | |||||| ||||||||||||||| ||||||||||  |||| |||||||| |||||||||||| ||||||||||||| |||||    
T  21020074 tttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccc 21020173  T
Q  256 tccttaattttgctttttctagtagtga 283  Q
    ||| ||||||||||||| ||||||||||    
T  21020174 tccctaattttgcttttcctagtagtga 21020201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 23217343 - 23217208
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||| ||  |||| ||| ||||| |||     
T  23217343 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcat 23217244  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||| ||||||| |||||| ||||||||    
T  23217243 taatttccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 13921330 - 13921460
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 13921429  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||  |||||||||||||||||||||||    
T  13921430 ttcctcgctaattttgctttttctagtagtg 13921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 7623666 - 7623530
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||| |||| ||| ||||||||||    
T  7623666 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtcac 7623567  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  | ||||| ||||||||||||||||    
T  7623566 taatttccctcgctgatttttctttttctagtagtga 7623530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 26098818 - 26098950
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||| ||||||| |    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatt 26098917  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||||||||||||||    
T  26098918 tccctcgctaattttgctttttctagtagtgat 26098950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 8110339 - 8110474
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||| ||||||||||||||||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||    
T  8110339 tgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtcac 8110438  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  8110439 taatttccctcactaattttgctttttctagtagtg 8110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 19269999 - 19269864
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  19269999 tgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19269900  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||||||||||||| |||||    
T  19269899 taatttccctcgctaattttgctttttctaatagtg 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 25882578 - 25882705
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||||| ||  |||| ||| ||||||||||||| ||||    
T  25882578 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 25882677  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||||||||||||| |||||    
T  25882678 ctcgctaattttgctttttctaatagtg 25882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 29236050 - 29236180
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  | ||||| ||| |||| ||| ||||||||||||| ||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||||||||||| ||||||    
T  29236150 ccctcgctaattttgctttttctaatagtga 29236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 46012858 - 46012728
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||||||||||||||  |||| |||||||||||  ||| |||||||| |||||||||||| ||||||||||||| |    
T  46012858 aaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaatt 46012759  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||| | |||||||||||||||||||||    
T  46012758 ttcctccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 11007818 - 11007681
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| |   |||| ||| ||||||||||    
T  11007818 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtcac 11007719  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| ||||||   |||||||||||||||||||||||||    
T  11007718 taatttcccttactaattttgctttttctagtagtgat 11007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 21816727 - 21816856
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||| |||||||||||||||    
T  21816827 ccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 31250088 - 31250225
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||||||||||||||   ||||||||||||||||| |||| ||||||||||| ||||  ||||||| ||  |||||||| ||||||||||    
T  31250088 tgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcac 31250187  T
Q  248 taat-tccctccttaattttgctttttctagtagtgat 284  Q
    |||| | ||||| ||||||||| |||||||||||||||    
T  31250188 taatcttcctccctaattttgcattttctagtagtgat 31250225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 19223449 - 19223585
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| | |||||||||| |||||||||||||||||||||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||    
T  19223449 tgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcac 19223548  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||  ||||||||||||||||||||||||    
T  19223549 caatttccctcgctaattttgctttttctagtagtga 19223585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 27968921 - 27969049
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| ||||  ||  ||| ||||||||||||  |||||||||||| ||    
T  27968921 aaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaattt 27969020  T
Q  253 ccctccttaattttgctttttctagtagt 281  Q
    |||||| | ||||||||||||||||||||    
T  27969021 ccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 29215992 - 29216128
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  29215992 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 29216091  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || || ||||| ||||||||||||| ||||||||||    
T  29216092 aaattttcctccataattttgcttttcctagtagtga 29216128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 36564574 - 36564438
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||| | |||||||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||||||||| ||||| ||||    
T  36564574 tgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatcac 36564475  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||| ||||||| ||||||||||||||||    
T  36564474 taattttcctccctaatttttctttttctagtagtga 36564438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 16299861 - 16299996
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  16299861 tgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 16299960  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || ||| |||| ||||||||||||| |||||||||    
T  16299961 aaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 18091674 - 18091547
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| | |||||||||||||||||||||| ||||||||||| ||||| ||||||| ||  |||| ||| ||||||||||||| ||||    
T  18091674 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 18091575  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||| ||||||||    
T  18091574 ctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 18104665 - 18104530
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||| |||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| |||||||||     
T  18104665 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtcaa 18104566  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  18104565 taatttccctcgctaattttgctttttctagtagtg 18104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 21088757 - 21088885
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||  |||||||||| |||| ||||||||  ||||||||||| ||||||||||||| |    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgt--gagattttattttttccgtcactaatt 21088854  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||| |||||||||  ||||||||    
T  21088855 tccctccctaactttgcttttcttagtagtg 21088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 30219338 - 30219473
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||  |||||||  ||||||||||    
T  30219338 tgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtcac 30219437  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||||||||| |||||||||    
T  30219438 aaatttccctccctaattttgcttttcctagtagtg 30219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 46942487 - 46942622
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||  || |||| || ||||| ||| |||| |||||    
T  46942487 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcac 46942586  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||| ||| |||||||| ||||||||||||||    
T  46942587 taatttccttccctaattttgatttttctagtagtg 46942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 11915758 - 11915892
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||| | ||  |||| ||  ||||||||||    
T  11915758 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcac 11915857  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
    ||| |||||||  ||||||||||||||||||||||    
T  11915858 taatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 13905168 - 13905038
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| |    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 13905069  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    || |||  |||||||||||||||||||||||    
T  13905068 tcgctctctaattttgctttttctagtagtg 13905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 15064122 - 15063992
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  |||||||||| || |    
T  15064122 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 15064023  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||||||||||||| |||||||||    
T  15064022 tccctccctaattttgcttttcctagtagtg 15063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 26830577 - 26830439
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtca 246  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||  |||||||| ||  |||||| || |||||||||    
T  26830577 tgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgtca 26830478  T
Q  247 ctaa-ttccctccttaattttgctttttctagtagtgat 284  Q
     ||| || ||||| ||||||| ||||||||| |||||||    
T  26830477 ttaattttcctccctaatttttctttttctaatagtgat 26830439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 29956368 - 29956510
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| |||||     
T  29956368 ttaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttcca 29956467  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtgatc 285  Q
    ||||||| |||||||  ||||||| ||||||||||||||||||    
T  29956468 tcactaatttccctcgctaattttactttttctagtagtgatc 29956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 30005523 - 30005665
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| |||||     
T  30005523 ttaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttcca 30005622  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtgatc 285  Q
    ||||||| |||||||  ||||||| ||||||||||||||||||    
T  30005623 tcactaatttccctcgctaattttactttttctagtagtgatc 30005665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 1311094 - 1310959
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttt-attatttccgtca 246  Q
    ||||| |||||||| || ||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| || |||||| ||| |||||||||    
T  1311094 tgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gattttcattttttccgtca 1310996  T
Q  247 ctaattc-cctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||   |||||||||||||||||||||||    
T  1310995 ctaattttccttgctaattttgctttttctagtagtg 1310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 1628215 - 1628347
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| || | || |||||| | ||  |||||||| ||||| |||     
T  1628215 tgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatcat 1628314  T
Q  248 taa-ttccctccttaattttgctttttctagta 279  Q
    ||| |||||||| ||||||| ||||||||||||    
T  1628315 taatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 3461440 - 3461308
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||  |||  ||||||| ||  |||||||| |||| |||||||| |    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatt 3461341  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||| ||  |||||||||||||||||||||||||    
T  3461340 tccttcgctaattttgctttttctagtagtgat 3461308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 4393485 - 4393357
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| ||    ||||||| ||| |||| ||| ||||||||||    
T  4393485 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtcac 4393386  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  4393385 taatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 10941785 - 10941665
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||||   ||    
T  10941785 gagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttacta 10941686  T
Q  262 attttgctttttctagtagtg 282  Q
    |||||||||||||||||||||    
T  10941685 attttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 17582436 - 17582332
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||||||| ||||||||||    
T  17582436 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcac 17582337  T
Q  248 taatt 252  Q
    |||||    
T  17582336 taatt 17582332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 27212916 - 27212812
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||| || ||||||||| ||||  ||||    
T  27212916 tgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttctatcac 27212817  T
Q  248 taatt 252  Q
    |||||    
T  27212816 taatt 27212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 9652578 - 9652713
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| | |   ||||||| ||  |||| ||| ||||||||||    
T  9652578 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcac 9652677  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||   ||||||||||||||||||||||    
T  9652678 taatttccctcgccaattttgctttttctagtagtg 9652713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 20615478 - 20615359
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||| ||| |||||||| |||||||| |    
T  20615478 tgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtctc 20615379  T
Q  248 taa-ttccctccttaatttt 266  Q
    ||| || |||||||||||||    
T  20615378 taattttcctccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 283
Target Start/End: Original strand, 23773482 - 23773613
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| |||  |||||||||||| |    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatt 23773581  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    |||||   |||||||| |||||||||||||||    
T  23773582 tcccttactaattttgttttttctagtagtga 23773613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 49915451 - 49915586
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| | ||  ||||||| || ||||||||  ||||||||||    
T  49915451 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtcac 49915550  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || ||||||| |||||||| |||||  ||||||||    
T  49915551 aaatttccctctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 1745617 - 1745488
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  1745617 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatt-tttccgtcactaatt 1745519  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||| ||||||||    
T  1745518 tccctcgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 43329893 - 43329763
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||| || |||||| ||||||||||||||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  43329893 aaaaattagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 43329794  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  43329793 tccctcgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 8428179 - 8428308
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  8428179 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 8428278  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||||  ||||||||||||||||    
T  8428279 ctcgctaattttattttttctagtagtgat 8428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 15490035 - 15490171
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||| ||||||||||||||||||| |||||  |||| ||||||||||| ||||| ||||||| |||||||||||| ||| ||||||    
T  15490035 tgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtcac 15490133  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| ||  |||| | |||||||||||| ||||||||||    
T  15490134 taatttttctccctgattttgctttttttagtagtgat 15490171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 18539804 - 18539932
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||| | ||  |||| ||| ||||||||||    
T  18539804 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtcac 18539903  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  18539904 taatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 19545510 - 19545614
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  19545510 tgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19545609  T
Q  248 taatt 252  Q
    |||||    
T  19545610 taatt 19545614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 26390754 - 26390634
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||| | |||| |||||||| ||  |||| ||| ||||||||||||| ||| |||  ||    
T  26390754 gagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgcta 26390655  T
Q  262 attttgctttttctagtagtg 282  Q
    |||||||||||||||||||||    
T  26390654 attttgctttttctagtagtg 26390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 11837353 - 11837214
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| | | |||| |||||||||| |||||| ||||||||||||||||| |||||||| || ||||||||||||| ||  |||| ||| |||||     
T  11837353 ttaatgagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttcca 11837254  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| || |||||||  |||||||| ||||||||||||||    
T  11837253 tcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 17762650 - 17762777
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||| | |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  17762650 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 17762749  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||| | ||||||||||||    
T  17762750 ctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 19063970 - 19064097
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||| | |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  19063970 atttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19064069  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||| | ||||||||||||    
T  19064070 ctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  188 aattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||||| |||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 31433737 - 31433872
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||| |||||||||||||||| ||||||||||||||||| |||||||| || |||| |||||||| ||| |||||||| ||||  ||||    
T  31433737 tgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatcac 31433836  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||   ||||||| |||||| ||||||||    
T  31433837 taatttccctatctaattttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 5744421 - 5744551
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||| |||||||||||||||| ||||||||||| | || |||||||| ||  |||||||  |||||||||| || |    
T  5744421 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5744520  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||| ||||||||||||| |||||||||    
T  5744521 ttcctccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 5781380 - 5781510
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||| |||||||||||||||| ||||||||||| | || |||||||| ||  |||||||  |||||||||| || |    
T  5781380 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5781479  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||| ||||||||||||| |||||||||    
T  5781480 ttcctccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 21490164 - 21490034
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aat 251  Q
    |||| |||| ||||||||| || ||||||||||||||||| |||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||| | | |    
T  21490164 aaaaattagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatt 21490065  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||| ||||||||||||||    
T  21490064 tccctcactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 11085471 - 11085342
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aatt 252  Q
    |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||  |||| ||| ||||||| ||| | ||    
T  11085471 aaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgattt 11085372  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    | |||  ||||||| |||||||||||||||    
T  11085371 ctctcgctaattttactttttctagtagtg 11085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 8546265 - 8546380
Alignment:
Q  168 aaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaatttt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||  |||||||| ||  |||| ||| ||||||||||||| || ||||  |||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  267 gctttttctagtagtg 282  Q
    ||||||||| ||||||    
T  8546365 gctttttctggtagtg 8546380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 10803721 - 10803856
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcac 247  Q
    |||| |||||||| |||||||||||| |||| ||||| ||||||||||| ||||||||||| ||||  ||||||| ||  |||| | || |||||||||     
T  10803721 gagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcat 10803820  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||| |||||| ||||||||||||||||    
T  10803821 taatttccctccctaatttggctttttctagtagtg 10803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 28859596 - 28859695
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||| ||||||||||  |||| |||||||| ||  |||| ||| |||||||||||||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28859695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 17269734 - 17269604
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| ||||  |||||||||||||||||||||||| |||||||||||  |||||||||||| ||  |||||||| ||||| ||  ||| |    
T  17269734 aaaaattagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatt 17269635  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||| ||  |||||||||||||||||||||||    
T  17269634 tccatcgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 144 - 277
Target Start/End: Complemental strand, 26963388 - 26963254
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||||| ||||||||| || |||| ||||||||||||||| | |||||||| |  |||||| |||||| | | |||| ||| ||| ||    
T  26963388 ttaatgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacg 26963289  T
Q  244 tcactaa-ttccctccttaattttgctttttctag 277  Q
    ||||||| ||||||| ||||||||| |||||||||    
T  26963288 tcactaatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 273
Target Start/End: Complemental strand, 29704167 - 29704041
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||| ||||||||||||||||||| ||||||||||| |||||||||||  || | ||||||| ||  |||| ||| ||||||||||    
T  29704167 tgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtcac 29704068  T
Q  248 taa-ttccctccttaattttgcttttt 273  Q
    ||| |||||||  ||||||||||||||    
T  29704067 taatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 50665766 - 50665636
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||||||||||| ||||| |||||||||||  |||||||||||| ||  |||||||  |||||||||  || |    
T  50665766 aaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatt 50665667  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||  ||||||||    
T  50665666 tccctctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 6088358 - 6088226
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||| ||||||||||||| | ||||||||| | |||| |||||| | ||  |||| ||| ||||||||||||| |    
T  6088358 aaaaattagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatt 6088259  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    |||||   | |||||||||||||||||||||||    
T  6088258 tcccttacttattttgctttttctagtagtgat 6088226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 284
Target Start/End: Original strand, 29451100 - 29451232
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||   |||||||||  |  | |||||| | ||| |||| ||| ||||||||||||| ||    
T  29451100 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaattt 29451199  T
Q  253 ccctccttaattttg-ctttttctagtagtgat 284  Q
    ||||| |||||||||  ||||||||||||||||    
T  29451200 ccctcgttaattttgtttttttctagtagtgat 29451232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 8543469 - 8543603
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   || |||| ||  |||| ||| ||||| ||||    
T  8543469 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttcatt-tttccatcac 8543567  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| |||||||| |||||    
T  8543568 taatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 37283549 - 37283659
Alignment:
Q  174 tgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttt 272  Q
    |||||||||||||||||||||||| ||||||||  | |||| |||||||| ||  |||||||  |||||||||| || |||||||| |||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  273 tctagtagtga 283  Q
     ||| ||||||    
T  37283649 cctaatagtga 37283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 47263394 - 47263264
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| ||||  || ||||| || |||| ||||||||||| |||| |||||||| ||  |||| ||| |||| ||||| || ||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    || || |||||||||||||||||||||||||    
T  47263294 ccttcgttaattttgctttttctagtagtga 47263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 6718725 - 6718814
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| |||||||||||||||    
T  6718725 gagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 6718814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 10772184 - 10772053
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaa- 250  Q
    ||||||||| |||||||||  |||||||||||||||||| ||||| ||||||||||| | ||| ||||||| |   |||  | || |||| ||||||||     
T  10772184 aaaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaat 10772085  T
Q  251 ttccctccttaattttgctttttctagtagtg 282  Q
    ||||||| |||||||| |||||||||||||||    
T  10772084 ttccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 50240751 - 50240850
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||||| ||||||||||  || | ||||||||||| |||| |||||| | |||||||||||| |||||||||||||||    
T  50240751 aaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaatt 50240850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 27711298 - 27711197
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| || ||||||| ||||||  |||||||||||||||| ||||||||||| ||||| | ||||| || || |||||| ||||| |||||||||    
T  27711298 aaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt 27711199  T
Q  253 cc 254  Q
    ||    
T  27711198 cc 27711197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 18380024 - 18380160
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||  ||||||||| || |||||||||| ||||||||||| |||||||| ||  |||  ||||||| |   |||| ||| ||||||||||    
T  18380024 tgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtcac 18380123  T
Q  248 t-aattccctccttaattttgctttttctagtagtga 283  Q
    | | |||||||  ||||||| ||||||||||||||||    
T  18380124 tgatttccctcgctaattttactttttctagtagtga 18380160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 23233293 - 23233214
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattt 232  Q
    |||| |||| ||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||| |||||| ||| ||||    
T  23233293 aaaaattagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaattt 23233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 20088406 - 20088488
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttatt 236  Q
    |||||||| |||| ||||| |||||||| ||||||||||| ||| ||||||||| | ||||||||||| | ||| ||||||||    
T  20088406 aaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatt 20088488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaat 203  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 6447344 - 6447241
Alignment:
Q  185 tctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt-ccctccttaattttgctttttctagtagtga 283  Q
    |||||||| |||| |||| |||| | ||||||||| ||  ||  |||||||| ||||| ||||||||| |||||| ||||||||||||| |||||||||     
T  6447344 tctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T
Q  284 tcca 287  Q
    ||||    
T  6447244 tcca 6447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 13615427 - 13615550
Alignment:
Q  160 agagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta-attccctcc 258  Q
    ||||| |||||||||||||| ||||||||||| | ||| ||||||||||||  ||  ||||||| || | |||||||  |||||||||||  || | | |    
T  13615427 agagaaggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttc 13615526  T
Q  259 ttaattttgctttttctagtagtg 282  Q
     ||||||||||||||||| |||||    
T  13615527 ctaattttgctttttctaatagtg 13615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 7e-38; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 32247916 - 32248048
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||  |||| ||| ||||||||||||| |    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatt 32248015  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    |||||| ||||||||||||||||||||||||||    
T  32248016 tccctcgttaattttgctttttctagtagtgat 32248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 3823135 - 3823270
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||| ||| ||||||||||    
T  3823135 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtcac 3823234  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||||||||||||| |||||    
T  3823235 taatttccctcgctaattttgctttttctaatagtg 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 17824751 - 17824614
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||||||  ||||||||||    
T  17824751 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 17824652  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
     || |||||||  |||||||||||||||||||||||||    
T  17824651 aaatttccctctctaattttgctttttctagtagtgat 17824614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 19256220 - 19256349
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||||||| ||||||||||||| ||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    ||||| ||||||||||||||||||||||||    
T  19256320 ccctcgttaattttgctttttctagtagtg 19256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 29345073 - 29345210
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  | ||  ||||||| | |||||||||| ||||||||||    
T  29345073 tgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcac 29345172  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||| ||||||| |||||||||||||||||    
T  29345173 taatttccctccctaatttttctttttctagtagtgat 29345210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 8555439 - 8555302
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| | ||||| |||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||    
T  8555439 tgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 8555340  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  |||||||||||||||||||||||||    
T  8555339 taatttccctcgctaattttgctttttctagtagtgat 8555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 26399137 - 26399005
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||||| |    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatt 26399038  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||| || |||   ||||| ||||||||||    
T  26399037 tccctccctattttacttttttttagtagtgat 26399005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 11938753 - 11938881
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatt-tttccgtcactaattt 11938851  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  11938852 ccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 15251610 - 15251738
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    ||||||| |||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| || | || |||||||||||| ||||||||||||| ||    
T  15251610 aaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaa-aaatcgtgagagattttattttttccgtcactaattt 15251708  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||||||||||| |||||||    
T  15251709 ccctccctaattttgctttttcaagtagtg 15251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 4330980 - 4331115
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||    
T  4330980 tgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 4331079  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  4331080 taatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 17104000 - 17103865
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||||||  ||||||||||    
T  17104000 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 17103901  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || ||| |||  |||||||| ||||||||||||||    
T  17103900 aaatttctctctctaattttgttttttctagtagtg 17103865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 19240869 - 19241004
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  19240869 tgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19240968  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  19240969 taatttccctcgctaattttgctttttctagtagtg 19241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 19314053 - 19314188
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  19314053 tgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 19314152  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  19314153 taatttccctcgctaattttgctttttctagtagtg 19314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 24576151 - 24576024
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  24576151 atttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24576052  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  24576051 ctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 27869248 - 27869375
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||| ||||||| ||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  27869348 ctcgctaattttgctttttctagtagtg 27869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 37992101 - 37992234
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| | ||||||| ||| |  ||||||||  ||||||||||    
T  37992101 tgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtcac 37992200  T
Q  248 taa-ttccctccttaattttgctttttctagtag 280  Q
    ||| || ||||| ||||||||||||| |||||||    
T  37992201 taattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 5670298 - 5670167
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||  ||| ||||||||||||| ||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  253 ccctccttaattttgctttttctagtagtgat 284  Q
    ||||| || |||||| ||||||||| ||||||    
T  5670198 ccctcgttgattttgttttttctagcagtgat 5670167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 25273457 - 25273327
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||| || || |||  | ||| ||||||||| |    
T  25273457 aaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgag-gactttcattttttcgtcactaatt 25273359  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    |||||| |||||||||||||||||||||||||    
T  25273358 tccctcgttaattttgctttttctagtagtga 25273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 43431694 - 43431559
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||| ||||| ||||||||||  |||| |||||||| ||  |||| ||| ||||||||||    
T  43431694 tgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcac 43431595  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||||||||||||    
T  43431594 taatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 19488191 - 19488061
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||  |||||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  19488191 aaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 19488092  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  19488091 tccctcgctaattttgctttttctagtagtg 19488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 23752416 - 23752286
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaat- 251  Q
    |||| |||| ||||||||| || ||||| |||||||||||||||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||||||||     
T  23752416 aaaaattagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaata 23752317  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||||||||||||||||| |||||    
T  23752316 tccctcgctaattttgctttttctaatagtg 23752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 24636660 - 24636790
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||  |||  ||||||| ||  |||| ||| ||||||||||||| ||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  253 ccctccttaattttgct-ttttctagtagtg 282  Q
    ||||| ||||||||||| |||||||||||||    
T  24636760 ccctcgttaattttgctattttctagtagtg 24636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 27910884 - 27910762
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| | | || |||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  27910884 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27910785  T
Q  262 attttgctttttctagtagtgat 284  Q
    |||||||||||||||||||||||    
T  27910784 attttgctttttctagtagtgat 27910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 27957303 - 27957181
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| | | || |||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  27957303 gagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 27957204  T
Q  262 attttgctttttctagtagtgat 284  Q
    |||||||||||||||||||||||    
T  27957203 attttgctttttctagtagtgat 27957181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 17810308 - 17810437
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| || |    
T  17810308 atttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaattttc 17810407  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||||||||||||||||||||||    
T  17810408 ctcgctaattttgctttttctagtagtgat 17810437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 22939323 - 22939451
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| ||||||||||||| ||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
     ||  ||||||||||||||||||||||||    
T  22939423 ttcactaattttgctttttctagtagtga 22939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 25655978 - 25655858
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  25655978 gagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcacta 25655879  T
Q  262 attttgctttttctagtagtg 282  Q
    |||||||||||||||||||||    
T  25655878 attttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 31399638 - 31399506
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||| | ||||||| |    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatt 31399539  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    |||||| ||||||||| ||||||||||||||||    
T  31399538 tccctcgttaattttgttttttctagtagtgat 31399506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 21350480 - 21350615
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||||| |||||| ||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  21350480 tgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 21350579  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||   | |||||||||||||||||||||    
T  21350580 taatttcccttgcttattttgctttttctagtagtg 21350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 33652577 - 33652704
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||| ||||||| ||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  33652577 atttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33652676  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||| ||||||    
T  33652677 ctcgctaattttgctttttctggtagtg 33652704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 24193325 - 24193195
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | |||||||||| ||||||| |||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  24193325 aaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 24193226  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||||||||||||||||||    
T  24193225 ccctcgctaattttgctttttctagtagtga 24193195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 30687943 - 30688073
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aat 251  Q
    ||||||||| || |||||| || |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| |||| |||||| | |    
T  30687943 aaaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatt 30688042  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  30688043 tccctcgctaattttgctttttctagtagtg 30688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 16062059 - 16061938
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||| ||||||||||||| |||||||||||||||| || |||||||| ||| ||||||||| ||  |||| ||| ||||||||||||| |||||||  ||    
T  16062059 gaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 16061960  T
Q  262 attttgctttttctagtagtga 283  Q
    ||||| ||||||||||||||||    
T  16061959 attttactttttctagtagtga 16061938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 30467083 - 30466954
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| ||||| |||||||||||| ||| ||||||||||| ||||  ||||| | ||  |||||| | ||||||||||||| ||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  30466983 ccctcgctaattttgctttttctagtagtg 30466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 18010180 - 18010060
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||  ||| |||||||| ||  |||| ||| ||||||||||||| ||| |||  ||    
T  18010180 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgcta 18010081  T
Q  262 attttgctttttctagtagtg 282  Q
    |||||||||||||| ||||||    
T  18010080 attttgctttttctggtagtg 18010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 6816510 - 6816383
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||||||||||||||||| || ||||||||||  |||| |||||||| ||| |||||||| ||| | ||||||| ||||    
T  6816510 atttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatcactaatttcc 6816411  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||| ||||||| |||||||||    
T  6816410 ctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 40289555 - 40289421
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||| |||| |||||||| ||| | || ||| ||||||||||    
T  40289555 tgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtcac 40289457  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  |||||||  ||||||||||||||    
T  40289456 taattttcctcgctaattttaatttttctagtagtg 40289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 13061061 - 13060931
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||||||||||||||| |||| ||||||||||| | || |||||||| ||  |||| ||| ||||||||||||| |    
T  13061061 aaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 13060962  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||  ||||||||||||| |||||||||    
T  13060961 tacctcgctaattttgcttttgctagtagtg 13060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 4647884 - 4647755
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||| | |   ||||||| ||  |||| ||| ||||||||||||| ||    
T  4647884 aaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaattt 4647785  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||| ||||||||||||||    
T  4647784 ccctcgctaattttgttttttctagtagtg 4647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 25000560 - 25000431
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| | ||||||||||||||||||||  ||||| |||| | || |||||||| ||  |||| ||| ||||||||||||| ||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||| |||||||||||||||    
T  25000460 ccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 8824832 - 8824964
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| |||| || |||||||||||||||||||||| ||||||||||| | || |||| ||| ||  |||| ||| ||||| ||||||| |    
T  8824832 aaaaattagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatt 8824931  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||||||||||||||    
T  8824932 tccctcgctaattttgctttttctagtagtgat 8824964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 280
Target Start/End: Complemental strand, 9915175 - 9915043
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||||||||||||||||||| | |||| |||||||||| | ||  |||||||| ||  |||| ||| ||||||||||    
T  9915175 tgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgc-gacatggaatttgtgaggaatttcattttttccgtcac 9915077  T
Q  248 taa-ttccctccttaattttgctttttctagtag 280  Q
    ||| ||| |||  |||||||||||||||||||||    
T  9915076 taatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 29350933 - 29351062
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttc-cgtcactaa-ttc 253  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||  |||||||| |||    
T  29350933 atttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagtcactaatttc 29351032  T
Q  254 cctccttaattttgctttttctagtagtga 283  Q
    ||||  ||||||||||||||||||||||||    
T  29351033 cctcgctaattttgctttttctagtagtga 29351062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 6817056 - 6817192
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || ||||| |||||||||||||||| ||||||||| | ||||  ||||||| ||  |||| ||| ||||||||||    
T  6817056 tgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcac 6817155  T
Q  248 t-aattccctccttaattttgctttttctagtagtga 283  Q
    | | || |||   ||||||||||||||||||||||||    
T  6817156 tgattttccttgctaattttgctttttctagtagtga 6817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 31344307 - 31344171
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||  |||  ||||| | ||| |||| ||| ||||| ||||    
T  31344307 tgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatcac 31344208  T
Q  248 taattccctcct-taattttgctttttctagtagtga 283  Q
    ||||| ||| || ||||||| |||||  |||||||||    
T  31344207 taatttccttctctaattttacttttcttagtagtga 31344171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 282
Target Start/End: Complemental strand, 6084378 - 6084246
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    |||| |||||||||||  ||||| || ||||| |||||||||||||||| ||||||||  | |||| |||||||   ||||||||||| |||||||||||    
T  6084378 gaggtaaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttg--ggagattttattttttccgtcact 6084281  T
Q  249 aa-ttccctccttaattttgctttttctagtagtg 282  Q
    || ||  |||| ||||||||||||||||| |||||    
T  6084280 aatttatctccctaattttgctttttctattagtg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 17003264 - 17003399
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| |||||||||||||||||||||| ||||  ||||||||| | |||| ||||||||| |  ||| |||||| | || | ||||||| |||||  |||    
T  17003264 tgagaaaaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacac 17003363  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||| |||||||||||||||||||||||    
T  17003364 taattttcctccctaattttgctttttctagtagtg 17003399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 18844679 - 18844544
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| || ||||||| ||||||||||||||||||  || | ||||||||||| ||||| ||||||| ||  |||||||  ||||| ||||    
T  18844679 tgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttccatcac 18844580  T
Q  248 taatt-ccctccttaattttgctttttctagtagtg 282  Q
     |||| || ||| ||||||||||||| |||||||||    
T  18844579 aaattaccatccctaattttgcttttcctagtagtg 18844544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 32961661 - 32961796
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || |||| ||||||||||||||||| |||| |||||| ||||  ||||||| ||  |||| ||| |||| |||||    
T  32961661 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtcac 32961760  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | |||||||  |||||||||||||| ||||||||    
T  32961761 tgatttccctcgctaattttgctttttttagtagtg 32961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 8789873 - 8789979
Alignment:
Q  179 tccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctag 277  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  |||| ||||| || || ||||| ||||||||||||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  278 tagtgat 284  Q
    |||||||    
T  8789973 tagtgat 8789979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 10917834 - 10917964
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| ||||| || ||||||||||||||||||||| ||||||||||   |||  ||||| | ||  |||||||  |||||||||| || |    
T  10917834 aaaaattagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatt 10917933  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| |||||||||||||||||||||||    
T  10917934 tccctccctaattttgctttttctagtagtg 10917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 19493762 - 19493688
Alignment:
Q  176 aaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa 250  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||    
T  19493762 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 21219357 - 21219240
Alignment:
Q  166 ggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaatt 264  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||| ||||| ||||| | ||  |||| ||| ||||||||||||| ||| |||  | |||    
T  21219357 ggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatt 21219258  T
Q  265 ttgctttttctagtagtg 282  Q
    || |||||||||||||||    
T  21219257 tttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 9631406 - 9631541
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattcc-gtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| |||||| | || ||||||||||||||  |||||||||||| |||| |||||||||||   | ||||||||| ||  |||||||| ||||||||||    
T  9631406 gagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcac 9631505  T
Q  248 taattc-cctccttaattttgctttttctagtagtg 282  Q
    |||||  |||   |||||||||||||||||||||||    
T  9631506 taattttccttgctaattttgctttttctagtagtg 9631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 33413095 - 33412977
Alignment:
Q  158 ttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccct 256  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||      |||||||| ||  |||| ||| ||||||| ||||| ||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  257 ccttaattttgctttttctagtagtg 282  Q
    |  ||||||| |||||||||||||||    
T  33413001 cgctaatttt-ctttttctagtagtg 33412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 25274654 - 25274735
Alignment:
Q  203 ttttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||||||| |||| |||||||| ||| |||| ||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 25274735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 5879206 - 5879302
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgt 244  Q
    ||||| |||||||| |||| ||||||| |||| ||||||||||||||||| |||||||| || ||||  ||||||| ||  |||||||| |||||||    
T  5879206 tgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 15289661 - 15289748
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||||||| ||||||   ||||||||||| ||| |||||||| || ||||||||||||| |||||||||||| | |||||| ||||||    
T  15289661 gagggaaaacatgaaata--tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaatt 15289748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 15470030 - 15470117
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||||||| ||||||   ||||||||||| ||| |||||||| || ||||||||||||| |||||||||||| | |||||| ||||||    
T  15470030 gagggaaaacatgaaata--tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaatt 15470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 2265474 - 2265378
Alignment:
Q  187 taattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaattccctccttaattttgctttttctagtagtga 283  Q
    |||||| |||| ||||||||| |  |||||||||||| |  ||||||||| ||||||||||||||| | ||| ||||||| ||||| ||||| ||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaatttcgtccctaattttacttttcctagttgtga 2265378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 24479925 - 24479874
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttg 207  Q
    ||||||||| |||||||||||||| |||||||||||| |||| |||||||||    
T  24479925 atttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 29473435 - 29473376
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttg 207  Q
    ||||| |||| |||| |||||||||||||||||| ||||| ||||||| | |||||||||    
T  29473435 tgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttg 29473376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 41527830 - 41527731
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||||| ||| ||||||  || | |||||||||||  ||| |||||| | || ||||||||| |||||||||||||||    
T  41527830 aaaaattagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaatt 41527731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 3692306 - 3692218
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttatt 236  Q
    ||||| ||||||| ||||| ||||||| |||||| ||||||||||| | | ||||||||  | | ||||||||||| ||  ||||||||    
T  3692306 tgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatt 3692218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 75)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 9892967 - 9893103
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  9892967 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 9893066  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  9893067 taatttccctcgctaattttgctttttctagtagtga 9893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 28364915 - 28365050
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||    
T  28364915 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcac 28365014  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  28365015 taatttccctcgctaattttgctttttctagtagtg 28365050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 12680319 - 12680186
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||  ||||||||| || ||  |||||||| ||||||||||    
T  12680319 tgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcac 12680220  T
Q  248 taattccctccttaattttgctttttctagtagtg 282  Q
    ||||| ||||||||||||| |||||| ||||||||    
T  12680219 taatttcctccttaatttttcttttt-tagtagtg 12680186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 12845007 - 12845124
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||  |||||||| ||||||||||    
T  12845007 tgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtcac 12845106  T
Q  248 taa-ttccctccttaatt 264  Q
    ||| |||||||| |||||    
T  12845107 taatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 12351721 - 12351585
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| | || |||||||| ||  |||||||| ||||||||||    
T  12351721 tgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtcac 12351622  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||||||||| | ||||||||||||||||    
T  12351621 taatttccctccttaattatactttttctagtagtga 12351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 14886565 - 14886701
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| | |||||||||||||||||||||| |||||||| || ||||||||| ||| || ||||||||| |||| |||||    
T  14886565 tgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtcac 14886664  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||| |||||||||||||||| |||||||    
T  14886665 taattttcctccctaattttgctttttctggtagtga 14886701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 12951712 - 12951847
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||||||  ||||||||||    
T  12951712 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtcac 12951811  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||  ||||||||||||| |||||||||    
T  12951812 aaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 15364593 - 15364458
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  15364593 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 15364494  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  15364493 taatttccctcactaattttgctttttctagtagtg 15364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 22579484 - 22579349
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||  |||| ||| ||||||||||    
T  22579484 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcac 22579385  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||||||||||||| |||||    
T  22579384 taatttccctcgctaattttgctttttctaatagtg 22579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 9885251 - 9885384
Alignment:
Q  152 gaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa- 250  Q
    |||||||||| |||||||||| |||||||||||| |||||  |||| ||||||||||  ||||  ||||||| |||||||||||| |||||||||||||     
T  9885251 gaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaat 9885350  T
Q  251 ttccctccttaattttgctttttctagtagtgat 284  Q
    |||||||| | |||||||||||||||||||||||    
T  9885351 ttccctccctgattttgctttttctagtagtgat 9885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 495762 - 495626
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  495762 tgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 495663  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| ||||||   ||||||||||||||||||||||||    
T  495662 taatttcccttgctaattttgctttttctagtagtga 495626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 6598476 - 6598604
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| ||||    
T  6598476 atttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtcactaatttcc 6598575  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
    |||  ||||||||||||||||||||||||    
T  6598576 ctcgctaattttgctttttctagtagtga 6598604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 25398006 - 25398138
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  25398006 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 25398105  T
Q  248 taa-ttccctccttaattttgctttttctagta 279  Q
    ||| |||||||  ||||||| ||||||||||||    
T  25398106 taatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 5360428 - 5360547
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||| ||  |||||||| ||||||||||||| |||||||  ||    
T  5360428 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgcta 5360527  T
Q  262 attttgctttttctagtagt 281  Q
    ||||||||||||||||||||    
T  5360528 attttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 12157511 - 12157380
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||||||||||||||  ||||  |||||||  ||||||||||||||| ||||||||  | ||||||| ||||| || ||||||||| ||||||||||    
T  12157511 tgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcac 12157412  T
Q  248 taa-ttccctccttaattttgctttttctagt 278  Q
    ||| ||||||||||||||||||||||||||||    
T  12157411 taatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 22083842 - 22083977
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||||  |||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  22083842 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 22083941  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||||||||| |||||||||    
T  22083942 aaatttccctccctaattttgcttttcctagtagtg 22083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 24661136 - 24661009
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  24661136 atttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 24661037  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  24661036 ctcgctaattttgctttttctagtagtg 24661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 21691631 - 21691494
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||| |||||||| ||| | ||||    
T  21691631 tgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatcac 21691532  T
Q  248 taa--ttccctccttaattttgctttttctagtagtga 283  Q
    |||  |||||||  ||||||| |||||| |||||||||    
T  21691531 taattttccctctctaattttactttttttagtagtga 21691494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 2992627 - 2992756
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||| ||||| ||||||| ||||    
T  2992627 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatcactaatttcc 2992726  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  ||||| ||||||| |||||||||||    
T  2992727 ctcgctaattatgcttttcctagtagtgat 2992756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 15448395 - 15448524
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||   || |||||||| ||  |||| ||| ||||||||||||| ||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  15448495 ccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 18033660 - 18033525
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||  |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| || || |||| | ||||||||||    
T  18033660 tgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttaatgtttccgtcac 18033562  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||| ||||||||||||| ||||||||||    
T  18033561 aaatttccctccctaattttgcttttcctagtagtga 18033525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 21140943 - 21141075
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||  ||  |||| ||| ||||||||||    
T  21140943 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtcac 21141042  T
Q  248 taa-ttccctccttaattttgctttttctagta 279  Q
    ||| ||||||| |||||||||||||||||||||    
T  21141043 taatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 26224440 - 26224568
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||| | ||||  ||||||| ||  |||| ||| ||||||||||||| ||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 26224539  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
    |||  ||||||||||||||||||||||||    
T  26224540 ctcgctaattttgctttttctagtagtga 26224568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 2669313 - 2669448
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| | || ||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||| ||||||    
T  2669313 tgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcac 2669412  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  2669413 taatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 21990309 - 21990175
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||| ||||  ||||||| ||  |||| ||| |||||||||     
T  21990309 tgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcatt-tttccgtcat 21990211  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  21990210 taatttccctcgctaattttgctttttctagtagtg 21990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 20182149 - 20182286
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||  ||   ||||||| ||  |||| ||| ||||||||||    
T  20182149 tgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcac 20182248  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  ||||||| |||||||||||||||||    
T  20182249 taatttccctcgctaattttactttttctagtagtgat 20182286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 22153842 - 22153705
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||  ||   ||||||| ||  |||| ||| ||||||||||    
T  22153842 tgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcac 22153743  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  ||||||| |||||||||||||||||    
T  22153742 taatttccctcgctaattttactttttctagtagtgat 22153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 30834089 - 30833960
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||| ||||| ||||||||||||||||| |||| ||||||||||| ||||| |||| || ||  |||| ||| ||||||||||||| ||    
T  30834089 aaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaattt 30833990  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  30833989 ccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 1939358 - 1939242
Alignment:
Q  167 gaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattt 265  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||  |||| ||| |||| |||||||| |||||||  ||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  266 tgctttttctagtagtg 282  Q
    |||||||||||||||||    
T  1939258 tgctttttctagtagtg 1939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 11049878 - 11049751
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    ||   |||||||| ||||||||||||||    
T  11049778 cttgctaattttgttttttctagtagtg 11049751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 11077658 - 11077785
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||| ||||||||||| |||| |||||||| ||  |||||||  |||||||||| || |    
T  11077658 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 11077757  T
Q  252 tccctccttaattttgctttttctagta 279  Q
    ||||||| ||||||| ||||||||||||    
T  11077758 tccctccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 16250931 - 16250800
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | |||||||||||||||||| ||||||||||| |||| |||||||||||  ||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  16250931 aaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 16250832  T
Q  253 ccctccttaattttgctttttctagtagtgat 284  Q
    ||||| ||||||||||||||||||||||||||    
T  16250831 ccctcgttaattttgctttttctagtagtgat 16250800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 33250835 - 33250708
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||| ||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||||  |||||||||||||    
T  33250735 ctcgttaattttgtcttttctagtagtg 33250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 15961537 - 15961407
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||| ||||||||||||||| | |||||||||||  |||  ||||||| ||  |||| ||| ||||||||||||| |    
T  15961537 aaaaattagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatt 15961438  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||||||||||||||||||||    
T  15961437 tccctcgttaattttgctttttctagtagtg 15961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 5192319 - 5192195
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||||| ||  |||| ||| ||||| ||||||| |    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaatt 5192220  T
Q  252 tccctccttaattttgctttttcta 276  Q
    | ||||  |||||||||||||||||    
T  5192219 ttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 6605626 - 6605494
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| ||||||| |||||||||||||||| || |||||||| | ||  ||||||| ||  |||| ||| ||||||||||||| |    
T  6605626 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatt 6605527  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||||||||||||||    
T  6605526 tccctcgctaattttgctttttctagtagtgat 6605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 18048792 - 18048928
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||| ||||||||||| |||||||  ||| ||||||||||| |||| |||||||| ||| |||||||| ||||||||||    
T  18048792 tgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtcac 18048891  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||  |||||||| |||| ||||||||||    
T  18048892 taattttcctctctaattttgtttttcctagtagtga 18048928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 12200706 - 12200833
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||  |||||||||||||||||||| ||| |||||||| || |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  12200706 atttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 12200805  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||| ||||    
T  12200806 ctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 18492389 - 18492508
Alignment:
Q  164 agggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaattccc-tccttaa 262  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||  |||||||| ||| |||| ||| |||||||||||||||  | ||  |||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtcactaatttgcatcgctaa 18492488  T
Q  263 ttttgctttttctagtagtg 282  Q
    ||||||||||||||| ||||    
T  18492489 ttttgctttttctagcagtg 18492508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 23281791 - 23281894
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||| ||  |||||||| ||||| |||||    
T  23281791 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcact 23281890  T
Q  249 aatt 252  Q
    ||||    
T  23281891 aatt 23281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 26939599 - 26939726
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| |||  |||||||| ||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||| |||||||||||||||    
T  26939699 ctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 9060101 - 9060222
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||| | ||||||  ||||||||||| |||| ||||||||||| ||||| ||||||| || ||||||||| ||||||||||||| ||    
T  9060101 aaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaattt 9060199  T
Q  253 ccctccttaattttgctttttct 275  Q
    | ||| |||||||||||||||||    
T  9060200 cgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 27796961 - 27796835
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||   ||| |||||| | ||| || | ||| ||| ||||||||| ||||    
T  27796961 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtcactaatttcc 27796862  T
Q  255 ctccttaattttgctttttctagtagt 281  Q
    |||  ||||||||||||||||||||||    
T  27796861 ctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 6065451 - 6065576
Alignment:
Q  158 ttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccct 256  Q
    |||| ||||||||||  ||||| |||||||||||  |||| |||||||||||  |||||||||||| |||||||||||| ||||||||| ||| || |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  257 ccttaattttgctttttctagtagtg 282  Q
    || ||||||||||||| ||| |||||    
T  6065551 ccctaattttgcttttcctaatagtg 6065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 12499225 - 12499358
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta-at 251  Q
    |||| |||| |||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||  |||| ||| ||||||||||||  |    
T  12499225 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12499324  T
Q  252 tccctccttaattttg-ctttttctagtagtgat 284  Q
    ||||||  ||||||||  ||||||||||||||||    
T  12499325 tccctcgctaattttgtttttttctagtagtgat 12499358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 12506554 - 12506687
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta-at 251  Q
    |||| |||| |||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||  |||| ||| ||||||||||||  |    
T  12506554 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12506653  T
Q  252 tccctccttaattttg-ctttttctagtagtgat 284  Q
    ||||||  ||||||||  ||||||||||||||||    
T  12506654 tccctcgctaattttgtttttttctagtagtgat 12506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 12509676 - 12509543
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta-at 251  Q
    |||| |||| |||||||||||| |||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||  |||| ||| ||||||||||||  |    
T  12509676 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12509577  T
Q  252 tccctccttaattttg-ctttttctagtagtgat 284  Q
    ||||||  ||||||||  ||||||||||||||||    
T  12509576 tccctcgctaattttgtttttttctagtagtgat 12509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 27705426 - 27705530
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||| ||    
T  27705426 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtaac 27705525  T
Q  248 taatt 252  Q
    |||||    
T  27705526 taatt 27705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 11530229 - 11530364
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||||| ||   ||  ||||| | ||| |||||||  ||||||||||    
T  11530229 tgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtcac 11530328  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||||||||| ||| |||||    
T  11530329 aaatttccctccctaattttgcttttcctaatagtg 11530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 33547555 - 33547654
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||||||| |||||||||| |||||||  |||| ||||||||||| ||||||||||||| || ||||||||| |||||||| ||||||    
T  33547555 aaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaatt 33547654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 28668109 - 28668239
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aat 251  Q
    |||| |||| ||||||||  || |||||||| ||||||||||||| |||||||||||  ||| |||||||| ||  |||||||| ||||||||||| | |    
T  28668109 aaaaattagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatt 28668208  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||||||| |||||||||||||||    
T  28668209 tccctcgctaattttactttttctagtagtg 28668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 276
Target Start/End: Complemental strand, 12205320 - 12205191
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||| ||    |||||||||| ||| |||| ||  ||||||||||    
T  12205320 tgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcac 12205221  T
Q  248 taa-ttccctccttaattttgctttttcta 276  Q
    ||| ||| || | ||||||| |||||||||    
T  12205220 taatttctcttcctaattttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 6978300 - 6978416
Alignment:
Q  167 gaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattt 265  Q
    |||||| |||||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||| ||||| |||||||  ||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  266 tgctttttctagtagtg 282  Q
    ||||||| ||| |||||    
T  6978400 tgcttttcctaatagtg 6978416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 20692941 - 20692817
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||| ||||| ||||||||||| ||||| || || | |   |||||||| ||||||||||||| |    
T  20692941 aaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaatt 20692842  T
Q  252 tccctccttaattttgctttttcta 276  Q
    | |||| ||||||||| ||||||||    
T  20692841 ttcctcgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 12160981 - 12160847
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||| |||||| |||||||||| | |||||||||||||||| ||||| |||||||| ||  |||| ||||||| ||  |||| ||| ||| ||||||    
T  12160981 tgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcac 12160883  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||||||||||||    
T  12160882 taatttccctcgctaattttactttttctagtagtg 12160847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 14872128 - 14872255
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||||||||||||||||| |||||||||   |||| |||||||| ||  |||||||  |||||||||| || |    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 14872227  T
Q  252 tccctccttaattttgctttttctagta 279  Q
    ||||||  ||||||| ||||| ||||||    
T  14872228 tccctctctaatttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 343698 - 343594
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||  |||||||||||| ||||||||||||||||| |||| |||| |||||| ||||| ||||||| ||  |||| ||| ||| ||||||    
T  343698 tgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtcac 343599  T
Q  248 taatt 252  Q
    |||||    
T  343598 taatt 343594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 16118150 - 16118254
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| ||||||||  |||||| ||| ||||||| |||||||||| ||||| |||||||||||  | | |||||||| |||||||||| | ||||||||||    
T  16118150 tgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcac 16118249  T
Q  248 taatt 252  Q
    |||||    
T  16118250 taatt 16118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 11431775 - 11431670
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta--ttatttccgtc 245  Q
    ||||| ||||||||||||| |||||| || |||||||| ||||||||||| ||||||||||    ||||||||||| ||||||||||  || ||||||||    
T  11431775 tgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttattttttttccgtc 11431677  T
Q  246 actaatt 252  Q
    |||||||    
T  11431676 actaatt 11431670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 15509184 - 15509295
Alignment:
Q  172 cgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctt 270  Q
    |||||||||||||||||||||||||| |||||||| || |||   ||||||| ||  |||| ||| ||||||||||||| |||||||  ||||||| |||    
T  15509184 cgtgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctt 15509283  T
Q  271 tttctagtagtg 282  Q
    ||||| ||||||    
T  15509284 tttctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 13145011 - 13145081
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgt 223  Q
    |||| |||| |||||||||||||||||| |||| ||||||||||| ||||||||||| |||| ||||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgt 13145081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 5270396 - 5270501
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcg-gccaaagaatttgtcagagattttattatttccgtca 246  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||  | ||| ||||||| ||| |||||||| ||||| |||    
T  5270396 tgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttccatca 5270495  T
Q  247 ctaatt 252  Q
    | ||||    
T  5270496 caaatt 5270501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 14036624 - 14036685
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcg 209  Q
    ||||| |||||| | |||||||||||||||||||||||||||||| |||| |||||||||||    
T  14036624 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcg 14036685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 14772691 - 14772800
Alignment:
Q  174 tgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttt 272  Q
    ||||||| |||||||||||||||| |||||||| || |||| |||||||| ||  |||||||  ||| |||||| || ||| |||| |||||||||||||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttt 14772790  T
Q  273 tctagtagtg 282  Q
    |||| |||||    
T  14772791 tctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 9878596 - 9878513
Alignment:
Q  201 aattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtgat 284  Q
    |||||| || ||||||||||||| || ||||||||| ||||| ||||||| |||||||| ||||||||||||||||| |||||||    
T  9878596 aattttacgaccaaagaatttgttagggattttatt-tttccatcactaaattccctccataattttgctttttctattagtgat 9878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 30745842 - 30745719
Alignment:
Q  158 ttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaattc-cct 256  Q
    ||||||||||||||||||||||  |||||||| ||||||| |||||||| ||  |||| ||||||| |  ||||||||| ||||  ||||||||||  ||    
T  30745842 ttagagagggaaaacgtgaaat--ctctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatcactaattcttct 30745745  T
Q  257 ccttaattttgctttttctagtagtg 282  Q
    || ||| ||||||||| | |||||||    
T  30745744 ccctaactttgcttttccaagtagtg 30745719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 17919555 - 17919676
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aattccctcctta 261  Q
    ||||||||  || |||||||||||||||||||||| ||||||||||| |||| |||||| | |   |||| ||| ||||||||| | | ||| |||  ||    
T  17919555 gagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgcta 17919654  T
Q  262 attttgctttttctagtagtga 283  Q
    |||||| |||||||||||||||    
T  17919655 attttgttttttctagtagtga 17919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 22055747 - 22055622
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||| |||| ||||| |||||||||||||||||||| ||| | ||||||| | |||| |||||||| ||  |||||||| |||| ||||     
T  22055747 tgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 22055648  T
Q  248 taa-ttccctccttaattttgctttt 272  Q
    ||| |||||||  |||||||| ||||    
T  22055647 taatttccctctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 8844252 - 8844168
Alignment:
Q  200 aaattttgcggccaaagaatttgtc-agagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||||||||| ||||  |||||||  |||||||||||| ||||||||||||| |||||||| | ||||| |||||||||||||||    
T  8844252 aaattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtg 8844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 13668123 - 13668071
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaatttt 206  Q
    |||||||||||||||||||||||||| || |||||||||| ||| ||||||||    
T  13668123 aaatttagagagggaaaacgtgaaattcccctctaattccatcattaaatttt 13668071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 2396209 - 2396312
Alignment:
Q  150 aggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtca-gagattttattatttccgtcact 248  Q
    ||||||||||||||||  ||||||||||||  ||||||  |||||||| |||||||| |  ||||||||||| | | ||  ||||||| |||||||||||    
T  2396209 aggaaaatttagagagcaaaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcact 2396308  T
Q  249 aatt 252  Q
    ||||    
T  2396309 aatt 2396312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 10929617 - 10929527
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtca-gagattttattatttccgtcactaatt 252  Q
    |||||||||| ||||||| |||| | ||||||||| ||||||||||| | || |||||||| | | ||||| ||| |||||||||||||||    
T  10929617 gagggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaatt 10929527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 10458773 - 10458902
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| |||| || ||||  |||| ||||||| ||| ||||||||||  |||| |||||||| ||  | || ||| ||||||||||||| |    
T  10458773 aaaaattagtgaggaaaaatgtaaaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatt 10458872  T
Q  252 tccctccttaattttgctttttctagtagt 281  Q
    ||||||  ||||||| ||||||||||||||    
T  10458873 tccctcactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 11350191 - 11350321
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttatt-atttccgtcactaa- 250  Q
    |||| |||| |||||||||| | ||||| ||||||||||| |||| |||||||||||   || ||||||||    |||||| ||  |||||||||| ||     
T  11350191 aaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgt----gatttttttgttttccgtcacaaat 11350286  T
Q  251 ttccctccttaattttgctttttctagtagtgatc 285  Q
    |||||||| ||||||||||||| |||||| |||||    
T  11350287 ttccctccctaattttgcttttcctagtaatgatc 11350321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 19175902 - 19175837
Alignment:
Q  158 ttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgt 223  Q
    |||| ||||||||| || |||| ||||||||||||||||| ||||||||||| ||||  |||||||    
T  19175902 ttagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgt 19175837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 7e-38; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 27428147 - 27428011
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||  |||||||| ||| ||||||    
T  27428147 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcac 27428048  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||| ||||||| |||||  |||||||||    
T  27428047 taatttccctccctaatttttcttttattagtagtga 27428011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 2472853 - 2472714
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| | |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||    
T  2472853 ttaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 2472754  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||||||| |||| ||  |||||||||||||||||||||||    
T  2472753 tcactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 16121966 - 16121839
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||| | |||| |||||||| ||  |||||||| ||||||||||||| ||||    
T  16121966 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 16121867  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  16121866 ctcgctaattttgctttttctagtagtg 16121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 17039766 - 17039631
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  17039766 tgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 17039667  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  |||||||||||||||||||||||    
T  17039666 taattttcctcactaattttgctttttctagtagtg 17039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 33818696 - 33818561
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  33818696 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 33818597  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || ||||||||  ||||||||||||||||||||||    
T  33818596 aaatttccctccccaattttgctttttctagtagtg 33818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 746998 - 746868
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 746899  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||| ||||||    
T  746898 tccctcgctaattttgctttttcttgtagtg 746868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 40484053 - 40484183
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||| | ||| |||| ||||||||||||||||| |    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatt 40484152  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||||||| |||||||||||||||    
T  40484153 tccctcgctaatttttctttttctagtagtg 40484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 13620256 - 13620127
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||  |||||||||| ||||  ||||||| |||||||||||| ||||||||||||| ||    
T  13620256 aaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaattt 13620157  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||| | ||||| |||||||||||||||    
T  13620156 ccctccctgatttttctttttctagtagtg 13620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 38837801 - 38837669
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  38837801 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 38837702  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  |||||||||||||||||||||||||    
T  38837701 tccctcgctaattttgctttttctagtagtgat 38837669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 618306 - 618433
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  618306 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 618405  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||||||||||||| |||||    
T  618406 ctcgctaattttgctttttctaatagtg 618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 7888801 - 7888936
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||| || |||| |||||||| ||  |||| ||| |||||||||     
T  7888801 tgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcaa 7888900  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  7888901 taatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 35620482 - 35620344
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| | |||||| |||||||||| |||||||| ||||||||||||||| ||||||||||| |||| |||||||| || || |||||| ||||||    
T  35620482 ttaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttattttttccg 35620384  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||||||| |||||||  ||||||||||||||||| |||||    
T  35620383 tcactaatttccctcgctaattttgctttttctaatagtg 35620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 25397918 - 25397788
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| |   |||||||  |||||||||| || |    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatt 25397819  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||| ||||||||||||| |||||||||    
T  25397818 tccctccctaattttgcttttcctagtagtg 25397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 17036540 - 17036412
Alignment:
Q  155 aatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaat-tc 253  Q
    |||||||||||||||||||  ||||||||||||||||| |||| ||||||||||| |||| |||||||| ||  ||||||||  ||||||||||||| ||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctc 17036441  T
Q  254 cctccttaattttgctttttctagtagtg 282  Q
     |||| ||||||||| |||||||||||||    
T  17036440 gctccctaattttgcattttctagtagtg 17036412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 12045731 - 12045866
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||||||| |||||||| || ||||  ||||||| ||  |||| ||| ||||||||||    
T  12045731 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtcac 12045830  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  12045831 taatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 20959512 - 20959647
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| || | || |||||||| ||  |||||||| |||||||||     
T  20959512 tgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtcag 20959611  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | || ||||| ||||||| |||||||||||||||    
T  20959612 tgattttcctccctaattttactttttctagtagtg 20959647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 36196398 - 36196533
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||| |||  || ||||| ||  |||| ||| ||||||||||    
T  36196398 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtcac 36196497  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  36196498 taatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 10494746 - 10494876
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 10494845  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||  |||||||||||||||||||    
T  10494846 tccctcgctacatttgctttttctagtagtg 10494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 26708714 - 26708584
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| |||||| |||||| ||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||| ||||||||||||||    
T  26708614 ccctcgctaattttgcattttctagtagtga 26708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 26978448 - 26978318
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| |||||| |||||| ||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||| ||||||||||||||    
T  26978348 ccctcgctaattttgcattttctagtagtga 26978318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 286
Target Start/End: Complemental strand, 8108989 - 8108856
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | |||||||||| |||||| ||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  8108989 aaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 8108890  T
Q  253 ccctccttaattttgctttttctagtagtgatcc 286  Q
    |||||  |||||||||||||||||||||||||||    
T  8108889 ccctctctaattttgctttttctagtagtgatcc 8108856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 5982645 - 5982785
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttcc 242  Q
    |||||||||||||||||| |||||||||| | |||||||||||||||||||||| |||| |||||| |||| |||||||| ||  |||  | || |||||    
T  5982645 ttaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttcc 5982744  T
Q  243 gtcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||||||| |||||||  | |||||||||||||||||||||    
T  5982745 gtcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 8886986 - 8886851
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||| ||||||    
T  8886986 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcac 8886887  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || || ||||  |||||||||||||||||||||||    
T  8886886 aaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 10420387 - 10420252
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||| |||||||||||||||| ||||||||||||||||||  |||| ||||||||||| ||||  || |||| || ||||||||| ||||||||||    
T  10420387 tgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcac 10420288  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||| | ||||||||    
T  10420287 taatttccctctctaattttgatttctttagtagtg 10420252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 11927921 - 11927786
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||| | ||  ||||||| || ||||||||| ||||| || |    
T  11927921 tgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctc 11927822  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||  |||| ||||||||||||||||| |||||    
T  11927821 taatttatctccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 28265614 - 28265475
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||| | ||||||| |||| |||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||    
T  28265614 ttaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 28265515  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||||||| || ||||  ||||||| |||||||||||||||    
T  28265514 tcactaattttcctcgctaattttactttttctagtagtg 28265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 36716335 - 36716200
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||| ||| |||||||| || ||| ||||||||| ||  |||| ||| ||||| ||||    
T  36716335 tgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatcac 36716236  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  36716235 taatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 16632004 - 16631874
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| || ||||||||| |||||||||||||||||||||| ||||||||| | |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  16632004 aaaaattagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 16631905  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||||||| |||||||||||||||    
T  16631904 tccctcgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 148 - 273
Target Start/End: Original strand, 23975639 - 23975765
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  23975639 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 23975738  T
Q  248 taa-ttccctccttaattttgcttttt 273  Q
    ||| |||||||  ||||||||||||||    
T  23975739 taatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 23423885 - 23423756
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||  |||| |||||||| ||  |||||||  ||| |||||| || ||    
T  23423885 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtcacaaattt 23423786  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||||||| | |||||||||    
T  23423785 ccctccctaattttgcttatcctagtagtg 23423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 24138970 - 24138841
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||| ||||  ||||||| ||| |||| ||| |||||||||| || ||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
     ||||  ||||||||||||||||| |||||    
T  24138870 tcctcgctaattttgctttttctaatagtg 24138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 4125318 - 4125186
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||| |||||||| |||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||||| |    
T  4125318 aaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 4125219  T
Q  252 tccctccttaattttgctttttctagtagtgat 284  Q
    ||||||  ||||||| |||||||||||||||||    
T  4125218 tccctcgctaattttactttttctagtagtgat 4125186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 17079409 - 17079513
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||| ||||  ||||||| || ||||||||| |||||||| |    
T  17079409 tgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtccc 17079508  T
Q  248 taatt 252  Q
    |||||    
T  17079509 taatt 17079513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 12328353 - 12328226
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||| ||||||||||||||||| |||||||||||  |||  ||||||| ||  |||| ||| ||||||| ||||| ||||    
T  12328353 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgttactaatttcc 12328254  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  12328253 ctcactaattttgctttttctagtagtg 12328226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 15060977 - 15061112
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||| |||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| |||| |||||    
T  15060977 tgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtcac 15061076  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||| ||||||    
T  15061077 taatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 25673363 - 25673229
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||  |||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||  ||| ||||||| ||||||||||    
T  25673363 tgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgtaggag-ttttattttttccgtcac 25673265  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||| |||||||  |||| |||||||||    
T  25673264 taattttcctccctaatttttattttcctagtagtg 25673229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 32726855 - 32726736
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| |||| ||||||||||  | ||||||  ||||| ||||||| ||    
T  32726855 aaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaattt 32726756  T
Q  253 ccctccttaattttgctttt 272  Q
    | |||| |||||||||||||    
T  32726755 cgctccctaattttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 35778150 - 35778277
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||| ||| |||| || | ||||||||||| |||| |||||||| |||||||||||| ||||| ||||||| |    
T  35778150 aaaaattagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatt 35778249  T
Q  252 tccctccttaattttgctttttctagta 279  Q
    |||||||  |||||| ||||||||||||    
T  35778250 tccctcccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 36832025 - 36831888
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||| ||| ||||||||| | |||| |||||| | ||  |||| ||| ||| |||| |    
T  36832025 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtccc 36831926  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  |||||||||||||||||||||||||    
T  36831925 taatttccctcactaattttgctttttctagtagtgat 36831888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 7003863 - 7003730
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||  ||||||||||||||| |||||||||||  ||  |||||||| ||  ||||| || ||||||||||    
T  7003863 tgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtcac 7003766  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  7003765 taatttccctcgctaattttgttttttctagtagtg 7003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 23408984 - 23409120
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtca 246  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||  |||  ||||||| ||  |||| | || |||||||||    
T  23408984 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgtca 23409083  T
Q  247 ctaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| ||  |||  |||||||||||||||||||||||    
T  23409084 ctaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 25652718 - 25652582
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || ||||||||||||||||||||||  |||||||||| | || |||||||| ||  |||| ||| |||| |||||    
T  25652718 tgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcac 25652619  T
Q  248 t-aattccctccttaattttgctttttctagtagtga 283  Q
    | | |||||||  ||||||||||||||||| ||||||    
T  25652618 tgatttccctcgctaattttgctttttctaatagtga 25652582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 3080827 - 3080706
Alignment:
Q  152 gaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa- 250  Q
    |||||||||| |||||||||| ||||||||||||| |||| | ||| ||| ||||| | | ||||||||||| |||||||||||| ||||| |||| ||     
T  3080827 gaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaat 3080728  T
Q  251 ttccctccttaattttgctttt 272  Q
    |||||| | |||||||||||||    
T  3080727 ttccctacctaattttgctttt 3080706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 20188076 - 20187939
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| ||||||||| ||| ||||||||  |||| ||||||||||| |||| |||||||||||  ||| |||||||| ||  |||||||| ||||||||||    
T  20188076 tgagaaaaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcac 20187977  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||| ||  ||||||||||||| ||| |||||||    
T  20187976 taatttccttcgctaattttgcttttgctaatagtgat 20187939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 281
Target Start/End: Complemental strand, 16472310 - 16472182
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaa-ttttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    ||||||||||||| |||| ||| |||| ||||||||||| |||| |||| ||||||| |||| |||||| | |  ||||||||| ||| || ||||||||    
T  16472310 aaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaatt 16472211  T
Q  253 ccctccttaattttgctttttctagtagt 281  Q
     |||||  |||||||||||||||||||||    
T  16472210 tcctcccaaattttgctttttctagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 23974703 - 23974576
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||| | |  ||||||||||||||| ||||| |||||||| || | || |||||||| |||||||||||| ||||||||||||| || |    
T  23974703 atttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttc 23974604  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    || | ||||||| ||||| |||||||||    
T  23974603 cttcctaatttttcttttcctagtagtg 23974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 22649468 - 22649406
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaatttt 206  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22649468 ttaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 33735088 - 33734974
Alignment:
Q  168 aaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaatttt 266  Q
    ||||| ||||| |||||| ||||||||||| ||||||||||| |||| |||||| | || ||||||||| ||||| ||| ||| || ||||| |||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  267 gctttttctagtagt 281  Q
    |||||| ||||||||    
T  33734988 gcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 17772098 - 17771969
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| | ||||| |||||||||||||||| |||||||||||  ||| |||||| | ||  |||| ||| ||||||||||||| |    
T  17772098 aaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatt 17771999  T
Q  252 tccctccttaattttgctttttctagtagt 281  Q
    ||||||  | ||||| ||||||||||||||    
T  17771998 tccctcgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 33816893 - 33816789
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||| ||| ||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  |||| |||||    
T  33816893 tgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtcac 33816794  T
Q  248 taatt 252  Q
     ||||    
T  33816793 aaatt 33816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 13974213 - 13974078
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||| ||||||||| |||||||  || |||   ||||||| |   |||| ||| ||| |||| |    
T  13974213 tgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtcgc 13974114  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  13974113 taatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 17986741 - 17986868
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||| | ||||||||||||||| ||||||||||| | || |||||||| |   |||| ||| ||||||||||||| |||     
T  17986741 atttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtcactaatttct 17986840  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||| |||||||||| ||||    
T  17986841 ctcactaattttactttttctagcagtg 17986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 36597470 - 36597339
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| | |||| |||||||||||| |||| |||||||| || |||| |||||||| ||  |||||||  |||||||||  || |    
T  36597470 aaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatt 36597371  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    |  ||||  |||||||||||||||||||||||    
T  36597370 tttctcccaaattttgctttttctagtagtga 36597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 31853212 - 31853135
Alignment:
Q  159 tagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttatt 236  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||||||||||| ||| | ||||| | || |||||||||    
T  31853212 tagagaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatt 31853135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 18413560 - 18413664
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||||||||||||||||||| ||||| | ||||||||||  |||||||| || | ||  || |||| || ||||||||| |||  |||||    
T  18413560 tgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttattttttaagtcac 18413659  T
Q  248 taatt 252  Q
    |||||    
T  18413660 taatt 18413664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 26301919 - 26302008
Alignment:
Q  160 agagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcacta 249  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||| | |  || |||||||| || | |||||||  |||||||||||    
T  26301919 agagagggaaaacgtgaaattgctctctaattccatcactaaattttacagttaaggaatttgtaaggggttttatttcttccgtcacta 26302008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 29727981 - 29727932
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtca 197  Q
    ||||| |||||| | ||||||||||||||||| |||||||||||||||||    
T  29727981 tgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtca 29727932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 5043640 - 5043542
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    ||||||||||||| |||||| ||||| || ||||||||||| || ||||||||  | | | | ||||||| ||| |||| ||| |||| ||||||||||    
T  5043640 aaatttagagaggaaaaacgcgaaattcccctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcactaatt 5043542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 19345284 - 19345317
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctc 186  Q
    |||||||||||||||||||||||||||| |||||    
T  19345284 aaaatttagagagggaaaacgtgaaatcactctc 19345317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 9024222 - 9024322
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaa-ttccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaat 251  Q
    |||| |||| |||||| ||| ||||||| |||||||| ||  || | ||||||||||| |||| ||||||   || ||||||||| ||||||||||||||    
T  9024222 aaaaattagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaat 9024321  T
Q  252 t 252  Q
    |    
T  9024322 t 9024322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 41637618 - 41637754
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  41637618 tgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcac 41637717  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||| ||||||||||||||||||||||||    
T  41637718 aaatttccctccctaattttgctttttctagtagtga 41637754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 37552233 - 37552362
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| ||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  37552333 ccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 22140480 - 22140363
Alignment:
Q  167 gaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattt 265  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||||| ||||||| |||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcgttaattt 22140381  T
Q  266 tgctttttctagtagtga 283  Q
    ||||||||||||||||||    
T  22140380 tgctttttctagtagtga 22140363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 28319713 - 28319580
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact 248  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| |||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  249 aa-ttccctccttaattttgctttttctagtagt 281  Q
    || |||||||  ||||||||||||||||||||||    
T  28319613 aatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 30783338 - 30783474
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||||||    
T  30783338 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtcac 30783437  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||| | ||||||||||||| ||||||||||    
T  30783438 aaatttcccttcctaattttgcttttcctagtagtga 30783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 41736172 - 41736308
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| ||||||||| || |||||||||||||||| ||||| |||||||||||  ||| |||||||| ||  |||| ||| ||||||||||    
T  41736172 tgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcac 41736271  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  41736272 taatttccctcgctaattttgctttttctagtagtga 41736308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 13788190 - 13788055
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| ||||||||| || |||||||||||||||| ||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  13788190 tgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 13788091  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | |||||||  |||||||||||||||||||||||    
T  13788090 tgatttccctcgctaattttgctttttctagtagtg 13788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 29749538 - 29749403
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| ||||  ||||||| ||  |||||||  ||||||||||    
T  29749538 tgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcac 29749439  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||| | |||||||||||||||||||||||    
T  29749438 aaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 43408641 - 43408511
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| |    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 43408542  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  43408541 tccctcactaattttgctttttctagtagtg 43408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 12779606 - 12779735
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  12779706 ccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 21293846 - 21293709
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||||||||| |||||||||||||||| |||||||| || |||  |||||||| ||| |||| ||| ||||||||||    
T  21293846 tgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtcac 21293747  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  |||||||| ||||||||||||||||    
T  21293746 taatttccctcgctaattttgttttttctagtagtgat 21293709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 32300451 - 32300579
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||    
T  32300451 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 32300550  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  32300551 taatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 26687820 - 26687689
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaa-t 251  Q
    |||||||| || ||||||| |||||||| ||||||||||||||| ||||||||||  |||| |||||||| ||| |||||| || ||||||||| ||| |    
T  26687820 aaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatt 26687721  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    |||||||||||||||||||| |||||||||||    
T  26687720 tccctccttaattttgctttatctagtagtga 26687689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 27327612 - 27327751
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||| | || |||||||| ||  |||||||  ||||||    
T  27327612 ttaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccg 27327711  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| || |||| ||| ||||||||||||| |||||||||    
T  27327712 tcacaaatttccatccctaattttgcttttcctagtagtg 27327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 37724121 - 37723990
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| ||    
T  37724121 aaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37724022  T
Q  253 ccctccttaattttgctttttctagtagtgat 284  Q
    |||||  | ||||| |||||||||| ||||||    
T  37724021 ccctcgctgatttttctttttctagcagtgat 37723990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 15636870 - 15636733
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  15636870 tgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 15636771  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||||||  |||||||||||||||| ||||||||    
T  15636770 taatttccctcgctaattttgctttttctggtagtgat 15636733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 32008952 - 32009088
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtca 246  Q
    ||||| |||||||  |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| | || |||||||||    
T  32008952 tgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgtca 32009051  T
Q  247 ctaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| || ||||  |||||||||||||||||||||||    
T  32009052 ctaattttcctcgctaattttgctttttctagtagtg 32009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 37802513 - 37802378
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtca- 246  Q
    ||||| ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||| ||||| || |||  |||||||||||| |||||||||     
T  37802513 tgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaa-aaattgcgagagattttattttttccgtcat 37802415  T
Q  247 ctaattccctccttaattttgctttttctagtagtga 283  Q
    | | ||| |||| ||||||||||||| ||||||||||    
T  37802414 caatttctctccctaattttgcttttcctagtagtga 37802378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 152 - 283
Target Start/End: Original strand, 40018806 - 40018938
Alignment:
Q  152 gaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa- 250  Q
    |||||||||| |||||||||| ||||||| |||||||||||  ||| | ||||||||  |||| |||||||| ||| |||||||| |||||||||||||     
T  40018806 gaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaat 40018905  T
Q  251 ttccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||| |||||||||||||||    
T  40018906 ttccctttttaattttgttttttctagtagtga 40018938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 8430296 - 8430431
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||  || | ||||||| ||  |||||||| ||||||||||    
T  8430296 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtcac 8430395  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||| |  |||||||| ||||||||||||||    
T  8430396 taatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 20065209 - 20065074
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||| ||||||||||||||||||||||||| |||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  20065209 tgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 20065110  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  20065109 taatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 28841469 - 28841342
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| | |||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||| ||||| ||||    
T  28841469 atttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttcc 28841370  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||||||||| |||||||||    
T  28841369 ctcgctaattttgcttttcctagtagtg 28841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 31266354 - 31266489
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  ||||||| |     
T  31266354 tgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtaaa 31266453  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||| ||||| |||||||||    
T  31266454 aaatttccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 44476505 - 44476374
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| || ||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||||||| |   |||| ||| ||||||||||||| |    
T  44476505 aaaaattagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatt 44476406  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||||||||||||||||||    
T  44476405 tccctcgctaattttgctttttctagtagtga 44476374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 7093573 - 7093703
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||||||||||||||  |||| ||||||||||| ||||| ||||||| ||  |||| ||| ||||||||||||| |    
T  7093573 aaaaattagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatt 7093672  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  ||||||||||||| |||||||||    
T  7093673 tccctcgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 13613219 - 13613093
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccc 255  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||| ||||||||| || ||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcc 13613120  T
Q  256 tccttaattttgctttttctagtagtg 282  Q
    ||  ||||||| ||||||| |||||||    
T  13613119 tcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 26243451 - 26243321
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| ||||||| |||| ||||||||||||||||| |||||||| || |||| |||||||| ||  |||||||| || ||| |||||| |    
T  26243451 aaaaattagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatt 26243352  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    |||||| ||||||||||||||||||||||||    
T  26243351 tccctcgttaattttgctttttctagtagtg 26243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 23858086 - 23857958
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||  ||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| || |||||||||| ||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatt-ttcccgtcactaattt 23857988  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  23857987 ccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 1141536 - 1141664
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||||||||||||||||||||| |||| ||||||||||| |||   ||||||| ||  |||| ||| ||||||||||    
T  1141536 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 1141635  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  1141636 taatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 18916529 - 18916411
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||  |||| ||||||| || ||||||||| ||||||||| ||| ||    
T  18916529 aaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttatt-tttccgtcagtaattt 18916431  T
Q  253 ccctccttaattttgctttt 272  Q
    |||| | |||||||||||||    
T  18916430 ccctgcctaattttgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 32185832 - 32185967
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||| || |||   ||||||  ||  |||| ||| ||||||||||    
T  32185832 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtcac 32185931  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  32185932 taatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 23388513 - 23388379
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| |   |||| ||| ||||||||||    
T  23388513 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtcac 23388414  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
     || |||||||  |||||||| |||||||||||||    
T  23388413 caatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  168 aaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattt 265  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||| ||||||| ||||| |||||||| ||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 18551380 - 18551252
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| | |||||||||||||||||||||| |||||||||||   || |||||||| ||  |||| ||| ||||||||||||| || |    
T  18551380 atttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattttc 18551281  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
    |||  |||||||||||||| |||||||||    
T  18551280 ctcgctaattttgctttttttagtagtga 18551252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 14757248 - 14757121
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaattccc 255  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||| |||||  |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  256 tcct-taattttgctttttctagtagtg 282  Q
    | |  |||||||||||||||||||||||    
T  14757148 ttcgctaattttgctttttctagtagtg 14757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 36550844 - 36550970
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||||| || |||| || || |||||| ||||| ||||||| ||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgaggga-tttattttttccatcactaatttcc 36550942  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||| ||||||||||||||    
T  36550943 ctctctaattttgttttttctagtagtg 36550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 44722940 - 44723067
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| ||| |||||  |||||||||||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| ||||| ||| ||| ||||    
T  44722940 atttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttcc 44723039  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  44723040 ctcgctaattttgctttttctagtagtg 44723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 28262364 - 28262496
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||| | |||   ||||||| ||  |||| ||| ||||| ||||    
T  28262364 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatcac 28262463  T
Q  248 taa-ttccctccttaattttgctttttctagta 279  Q
    ||| ||||||   ||||||| ||||||||||||    
T  28262464 taatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 29998694 - 29998606
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttatt 236  Q
    ||||| || |||||||| |||||||||||||||| ||||||||||||||| |||||||||||  |||  ||||| ||||||||||||||    
T  29998694 tgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcgttcaataaatttttcagagattttatt 29998606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 8763639 - 8763757
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    ||||||||| || ||||||| |||||||| ||||||||||||||| ||||||||  |  ||| ||||||||  ||||||||||| ||||||||||||| |    
T  8763639 aaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaact 8763738  T
Q  252 tccctccttaattttgctt 270  Q
    |  |||| |||||||||||    
T  8763739 tttctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 27523019 - 27523084
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaattt 221  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  27523019 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 38362401 - 38362276
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||| | |||||||| |||| | |||||| || ||||||||||||| ||  |||| ||| ||||||||||||| |    
T  38362401 aaaaattagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 38362302  T
Q  252 tccctccttaattttgctttttctag 277  Q
    |||||   ||||||||||||||||||    
T  38362301 tcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 13134755 - 13134651
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||| |||||||||||| ||||||| |||||||||| |||||||  |||| |||||||| || | ||| || |||| || ||||||||| ||||||||||    
T  13134755 tgagaaaaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcac 13134656  T
Q  248 taatt 252  Q
    |||||    
T  13134655 taatt 13134651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 27040003 - 27039907
Alignment:
Q  188 aattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtga 283  Q
    |||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtga 27039907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 2556095 - 2556230
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||||||||||||| |||||||   ||||||||||||||| |||||||| |  ||||  ||||||| ||| |||||||| ||||| ||||    
T  2556095 tgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcac 2556194  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  ||||||| |||||| ||||||||    
T  2556195 taattttcctctctaattttactttttttagtagtg 2556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 36373900 - 36374033
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| ||||||||| ||||||| |  ||||||||| |||| |||||||| ||  ||| |||||||  || ||||||||| |||||||| |    
T  36373900 tgaggaaaatttagtgagggaaaatgtgaaattc--ctctaattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtcgc 36373997  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | ||||  |||| |||||||| |||| |||||||||    
T  36373998 taaatttactccctaattttgtttttcctagtagtg 36374033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 22192248 - 22192315
Alignment:
Q  217 aatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  22192248 aatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtga 22192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 9004443 - 9004306
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||| || ||||  |||||||||||| ||| |||||||||   | || |||||| | ||| |||| |||  |||||||||    
T  9004443 tgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtcac 9004344  T
Q  248 taat-tccctccttaattttgctttttctagtagtgat 284  Q
    |||| | |||| ||||||||  ||||||||||||||||    
T  9004343 taatattcctcgttaattttattttttctagtagtgat 9004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 18609520 - 18609649
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| |||||| ||||||||||| | | |  ||||||||||  ||| |||||||| || |||| |||| | ||||||||||| ||    
T  18609520 aaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaattt 18609619  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
     |||||||| |||| ||||| ||| |||||    
T  18609620 tcctccttatttttacttttcctaatagtg 18609649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 44366132 - 44366007
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||| |||| ||||| |||||||||||||||||||| ||| | ||||||| | |||| |||||||| ||  |||||||| |||| ||||     
T  44366132 tgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtcat 44366033  T
Q  248 taa-ttccctccttaattttgctttt 272  Q
    ||| |||||||  |||||||| ||||    
T  44366032 taatttccctctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 31966644 - 31966556
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||| ||| ||||||| ||||||||||  || | ||||||||||| |||| |||||| | || ||||||||| |||||||||||||||    
T  31966644 gagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaatt 31966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 27058451 - 27058407
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattc 192  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||    
T  27058451 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 16098999 - 16098916
Alignment:
Q  201 aattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt-ccctccttaattttgctttttctagtagtga 283  Q
    ||||||||  |||| ||| |||| |||||||| ||| |||| || ||||||| |||||| |||||||| |||||||||||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtga 16098916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 16099039 - 16098996
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaatt 191  Q
    ||||| || |||||||||||||| ||||||||||||||||||||    
T  16099039 tgagggaattttagagagggaaagcgtgaaatccctctctaatt 16098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 9590470 - 9590588
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||  ||||||||||||| ||||||||||  || | |||||||||||   ||  ||||| | | |||||| ||| ||||||||||    
T  9590470 tgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtcac 9590569  T
Q  248 taa-ttccctccttaattt 265  Q
    ||| |||||||| ||||||    
T  9590570 taatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 24117364 - 24117315
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtca 197  Q
    ||||||||||||||||| | ||||| |||||| | |||||||||||||||    
T  24117364 tgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtca 24117315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 37786373 - 37786409
Alignment:
Q  155 aatttagagagggaaaacgtgaaatccctctctaatt 191  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  37786373 aatttagagaaggaaaacatgaaatccctctctaatt 37786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 12720821 - 12720949
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||| ||||||||||||| ||||    
T  12720821 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtcactaatttcc 12720920  T
Q  255 ctccttaattttgctttttctagtagtga 283  Q
    |||  ||||||||||||||||||||||||    
T  12720921 ctcgctaattttgctttttctagtagtga 12720949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 50845462 - 50845330
Alignment:
Q  151 ggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa 250  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||||||  |||||||||| ||    
T  50845462 ggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaa 50845363  T
Q  251 -ttccctccttaattttgctttttctagtagtg 282  Q
     |||||||| |||||||||||||||||||||||    
T  50845362 tttccctccctaattttgctttttctagtagtg 50845330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 14760871 - 14761006
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||  |||||||  ||||||||||    
T  14760871 tgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtcac 14760970  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || ||||||| ||||||||||||||||||||||||    
T  14760971 aaatttccctctttaattttgctttttctagtagtg 14761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 45839304 - 45839431
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  45839304 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 45839403  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||||||||||||||||||||    
T  45839404 ctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 29549422 - 29549558
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||| ||| | ||| ||||||| ||| |||||||| ||| ||||||    
T  29549422 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtcac 29549521  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||||||||||||||||||||    
T  29549522 taatttccctcgctaattttgctttttctagtagtga 29549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 38531305 - 38531170
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| | || |||||||| ||  |||||||| ||||||||||    
T  38531305 tgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtcac 38531206  T
Q  248 -taattccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||| |||||||||||||||    
T  38531205 ttatttccctccctaattttactttttctagtagtg 38531170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 41752445 - 41752572
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| | | |||||||| ||||||||||||| ||||    
T  41752445 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtcactaatttcc 41752544  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
     ||  |||||||||||||||||||||||    
T  41752545 gtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 46865247 - 46865382
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||| | | ||||||||||||||||  ||||||| || ||||||||| ||||||||||    
T  46865247 tgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcac 46865346  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||| || |||| |||||||||||||||    
T  46865347 taatttccctccctagtttttctttttctagtagtg 46865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 52183682 - 52183817
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||||||| |||||||||     
T  52183682 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcat 52183781  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  52183782 taatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 46790009 - 46790139
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| |    
T  46790009 aaaaattagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 46790108  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  46790109 tccctcgctaattttgctttttctagtagtg 46790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 9110102 - 9109973
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||||| ||||    
T  9110102 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 9110003  T
Q  255 ctccttaattttgctttttctagtagtgat 284  Q
    |||  |||||||||||||||||||||||||    
T  9110002 ctcgctaattttgctttttctagtagtgat 9109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 6459229 - 6459356
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  6459229 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 6459328  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||| ||||||||||||||||    
T  6459329 ctcgctaatttcgctttttctagtagtg 6459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 18895035 - 18894900
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| ||| ||  |||||||| ||| ||||||    
T  18895035 tgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtcac 18894936  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  ||||||||||||| |||||||||    
T  18894935 taattttcctcgctaattttgcttttcctagtagtg 18894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 19081732 - 19081867
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| || |||| |||||||| ||| |||||||| ||||| ||||    
T  19081732 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcac 19081831  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||| ||||||||    
T  19081832 taatttccctctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 19129620 - 19129755
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| || |||| |||||||| ||| |||||||| ||||| ||||    
T  19129620 tgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcac 19129719  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||| ||||||||    
T  19129720 taatttccctctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 41063201 - 41063336
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||| ||||| | ||||| |||||||||||||||| |||||||||||  |||||||| ||| || ||||||||| ||||||||||    
T  41063201 tgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtcac 41063300  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||| ||||||||| |||||||||||||||    
T  41063301 taattttccttcttaattttactttttctagtagtg 41063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 46786087 - 46785964
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| ||| |||| ||| |||| ||| ||||||||||||| ||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  253 ccctccttaattttgctttttcta 276  Q
    |||||  |||||||||||||||||    
T  46785987 ccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 19865253 - 19865383
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||||||| |    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatt 19865352  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | ||||  ||||||| |||||||||||||||    
T  19865353 ttcctcgctaattttactttttctagtagtg 19865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 28229585 - 28229455
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| |    
T  28229585 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28229486  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    ||||||  |||||||||||||||||||||||    
T  28229485 tccctcgctaattttgctttttctagtagtg 28229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 4340417 - 4340546
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    ||||   ||||||||||||||||| |||||    
T  4340517 cccttgctaattttgctttttctaatagtg 4340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 20408295 - 20408159
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||| | ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||    
T  20408295 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 20408196  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||  ||||||||||||||||||||||||    
T  20408195 taattttcctcgctaattttgctttttctagtagtga 20408159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 13523096 - 13522993
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||| |||| ||||| | ||    
T  13523096 tgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttccataac 13522997  T
Q  248 taat 251  Q
    ||||    
T  13522996 taat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 16258621 - 16258490
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  |||| |||| ||| ||| |||||||| |||||| |||    
T  16258621 tgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgccac 16258522  T
Q  248 t-aattccctccttaattttgctttttctagt 278  Q
    | |||| | ||||||||||||||||| |||||    
T  16258521 taaattacatccttaattttgcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 16913712 - 16913581
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||| || | || |||||||| ||  |||||||| ||||||||||    
T  16913712 tgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtcac 16913613  T
Q  248 taa-ttccctccttaattttgctttttctagt 278  Q
    ||| |||||| | ||||||||||||| |||||    
T  16913612 taatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 22603552 - 22603687
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||||  |||||||||||| ||  |||| ||| ||||| ||||    
T  22603552 tgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatcac 22603651  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||   |||||||||||||||||||||||    
T  22603652 taatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 9259318 - 9259184
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||||||||||| |||||||||||||||| ||||||||||| |||   ||||||| ||| ||||| || ||||||||||    
T  9259318 tgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtcac 9259219  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
    ||| || |||| ||||||||| |||||||||||||    
T  9259218 taattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 17661054 - 17661191
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||| ||||||||||||| ||| ||||||||||| |||   ||||||| ||  |||||||| ||||||||||    
T  17661054 tgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtcac 17661153  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgat 284  Q
    ||| |||| || |||||||||||||||||| |||||||    
T  17661154 taatttccgtcgttaattttgctttttctaatagtgat 17661191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 41120866 - 41120737
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||| ||||||| ||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||||||||||||| |||||    
T  41120766 ccctcgctaattttgctttttctattagtg 41120737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 7830035 - 7830171
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| ||||||||||| |||||| ||||| ||||||||||| |||| |||||||| ||| |||||||  ||||| |||     
T  7830035 tgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatcat 7830134  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||| ||||||||||||| ||||||||||    
T  7830135 aaatttccctccctaattttgcttttcctagtagtga 7830171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 9985462 - 9985326
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||| ||||||| |||||||||||||||||||||| |||||||| || ||||||||||||| ||  |||| ||| ||||||||||    
T  9985462 tgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtcac 9985363  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| ||||||   |||||||| |||||||||||||||    
T  9985362 taatttcccttgctaattttgttttttctagtagtga 9985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 12989856 - 12989992
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| |||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| |||||||| ||| |||||||| ||||||||||    
T  12989856 tgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtcac 12989955  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || ||| |||  |||||||||||||| |||||||||    
T  12989956 caatttctctctctaattttgctttttttagtagtga 12989992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 13102320 - 13102456
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| | ||||| || ||||||||||||| ||||||||||| |||| |||||||| |   |||||||  ||||||||||    
T  13102320 tgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtcac 13102419  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||||||||||||||||| ||||||||||    
T  13102420 aaatttccctccttaattttgcttttcctagtagtga 13102456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 41071970 - 41071866
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| | ||||||||    
T  41071970 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtcac 41071871  T
Q  248 taatt 252  Q
    |||||    
T  41071870 taatt 41071866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 6412180 - 6412053
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||| ||||||||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||| ||||| ||||    
T  6412180 atttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaatttcc 6412081  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||||||||    
T  6412080 ctcgctaattttgctttttctagtagtg 6412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 8941124 - 8940993
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||| ||||||||||||||||  |||||||| ||  ||| |||||||| ||| |||| ||| ||||||||||||| |    
T  8941124 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatt 8941025  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  ||||||||||||||||||||||||    
T  8941024 tccctcgctaattttgctttttctagtagtga 8940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 15243089 - 15243224
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| |||||||| ||  |||| ||| ||||||||||    
T  15243089 tgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcac 15243188  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||| |||  | ||||| |||||||||||||||    
T  15243189 taatttctctcgctgatttttctttttctagtagtg 15243224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 148 - 285
Target Start/End: Original strand, 22158806 - 22158944
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| |||| |||||    
T  22158806 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtcac 22158905  T
Q  248 taa-ttccctccttaattttgctttttctagtagtgatc 285  Q
    ||| |||||||  ||||||| |||||||| |||||||||    
T  22158906 taatttccctcgctaattttactttttctggtagtgatc 22158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 46339583 - 46339445
Alignment:
Q  145 taatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgt 244  Q
    |||||||| | ||||||  ||||||||| ||||||| |||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| |||||||    
T  46339583 taatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgt 46339484  T
Q  245 cactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||||| || ||||  |||||||||||||||||||||||    
T  46339483 cactaattttcctcgctaattttgctttttctagtagtg 46339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 26825253 - 26825374
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccc 255  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||  |||||||||||| || ||  ||||| ||||||||||||| || |     
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttct 26825352  T
Q  256 tccttaattttgctttttctag 277  Q
    ||| ||| ||||||||||||||    
T  26825353 tccataactttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 30928513 - 30928388
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||  ||| |||||| ||||||  |||||||||||  ||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||    
T  30928513 tgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcac 30928414  T
Q  248 taa-ttccctccttaattttgctttt 272  Q
    ||| |||||||  |||||||||||||    
T  30928413 taatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 153 - 285
Target Start/End: Original strand, 39748942 - 39749075
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    ||||||||| || ||||||| ||||||||| ||| |||| ||||| |||||||||||  |||| || |||  ||||||||| || ||||||||||||| |    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatt 39749041  T
Q  252 tccctccttaattttgctttttctagtagtgatc 285  Q
    || |||||||||||||||||| ||||||||||||    
T  39749042 tcgctccttaattttgcttttcctagtagtgatc 39749075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 48522537 - 48522658
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||| |||||| |||||  |||||||||| ||||||||||| ||||| ||||||| ||| |||||||| |||| |||||||| || ||||  ||    
T  48522537 gagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctcgcta 48522636  T
Q  262 attttgctttttctagtagtga 283  Q
    ||||||||||||||||||||||    
T  48522637 attttgctttttctagtagtga 48522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 9464107 - 9464211
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  |||| ||| ||||||||||    
T  9464107 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 9464206  T
Q  248 taatt 252  Q
    |||||    
T  9464207 taatt 9464211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 12161818 - 12161954
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| |||||||||     
T  12161818 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaa 12161917  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| || ||||  ||||||| ||||||||||||||||    
T  12161918 taattttcctcgctaattttactttttctagtagtga 12161954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 22789726 - 22789622
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| |||| ||||||||||| |||  |||||||| ||| |||||||  ||||||||||    
T  22789726 tgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtcac 22789627  T
Q  248 taatt 252  Q
    |||||    
T  22789626 taatt 22789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 23457901 - 23458036
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||   ||||||| ||  |||| ||| |||||||||     
T  23457901 tgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcaa 23458000  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  ||||||| |||||||||||||||    
T  23458001 taattttcctcgctaattttactttttctagtagtg 23458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 51973424 - 51973563
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||| | ||||||||| |||||||  |||||||||||||||| ||||||||||| ||| ||| ||| | ||  |||| ||| ||||||    
T  51973424 ttaatgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccg 51973523  T
Q  244 tcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    | ||||| |||||||  |||||||||||||||||||||||    
T  51973524 ttactaatttccctcgctaattttgctttttctagtagtg 51973563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 14486767 - 14486683
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttt 233  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||  ||||| |||||| |||||||||    
T  14486767 tgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaag-atttgtaagagatttt 14486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 7181674 - 7181555
Alignment:
Q  164 agggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaa 262  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||   ||| ||| ||  ||||| || ||||||||||||| ||||||   |||    
T  7181674 agggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcactaatttcccttgctaa 7181575  T
Q  263 ttttgctttttctagtagtg 282  Q
    ||||||||||||||||||||    
T  7181574 ttttgctttttctagtagtg 7181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 13195587 - 13195722
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||||||||||||| |  ||||||||||||||||| |||| ||||||||||| || | ||||| || ||  ||||||   ||||| ||||    
T  13195587 tgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcac 13195686  T
Q  248 taat-tccctccttaattttgctttttctagtagtg 282  Q
    |||| ||||||| ||||||||| |||||||||||||    
T  13195687 taatctccctccctaattttgcattttctagtagtg 13195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 17734089 - 17733954
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaatttt-gcggccaaagaatttgtcagagattttattatttccgtca 246  Q
    ||||| |||||||| |||||||||| ||||||| ||| |||||||| ||| |||||||| ||| ||||  ||||||| |||||||||||  |||||||||    
T  17734089 tgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgtca 17733990  T
Q  247 ct-aattccctccttaattttgctttttctagtagt 281  Q
    || ||||  |||| ||||||||||||| ||||||||    
T  17733989 ctaaattttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 20580922 - 20581049
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaa-ttcc 254  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||||||| | || |||||||| ||| |||| | || ||||| ||||||| ||||    
T  20580922 tttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttcc 20581021  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  ||||||| |||||| ||||||||    
T  20581022 ctctctaattttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 25788105 - 25787998
Alignment:
Q  175 gaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgcttttt 273  Q
    ||||||||||||||||||||||| ||||||||||| |||  |||||||| ||  ||||| || ||||||||||||| || ||||  ||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  274 ctagtagt 281  Q
    ||||||||    
T  25788005 ctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 11917799 - 11917924
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcact-aattccc 255  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||| ||||||| ||| ||||| || ||| ||||||| | |||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtt-ttttcgtcactgatttccc 11917897  T
Q  256 tccttaattttgctttttctagtagtg 282  Q
    ||  ||||||| ||||| ||| |||||    
T  11917898 tctctaatttttcttttcctaatagtg 11917924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 50092427 - 50092297
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | |||||||||| |||||||||||||||||||||||| ||||||||| |  ||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  50092427 aaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaattt 50092328  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||| ||||||||||||||||    
T  50092327 ccctcgctaatttttctttttctagtagtga 50092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 9177110 - 9177239
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||| ||||||| |||||||||| ||||| ||||| ||||||||||| ||||  ||||||| ||  |||| ||| ||||||| ||||| ||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||| ||||||||||||||    
T  9177210 ccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 18890684 - 18890556
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||| ||||||||||||||||||||||||||||| | ||||||||||| |||   ||||||| ||  |||| ||| ||||| ||||    
T  18890684 tgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatcac 18890585  T
Q  248 taa-ttccctccttaattttgctttttct 275  Q
    ||| |||||||  ||||||||||||||||    
T  18890584 taatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 27253955 - 27253855
Alignment:
Q  183 tctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagt 281  Q
    ||||||||||||||| ||||||||||| |||  |||||||| ||| |||||||| ||||||||| ||| || ||||| ||||||| ||||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  282 g 282  Q
    |    
T  27253855 g 27253855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 41359020 - 41359094
Alignment:
Q  176 aaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa 250  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||    
T  41359020 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 6775887 - 6776015
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||  |||||||| |||  ||||| | |||| |||||||||||||||   ||| ||||||  ||||||||||||| || ||||||||| |||||     
T  6775887 ttaatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttcca 6775986  T
Q  244 tcactaattccctccttaattttgctttt 272  Q
    |||||| |||||||  |||||||||||||    
T  6775987 tcactatttccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 12174893 - 12174797
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||||| |||||||||| |||||||| ||||||||||||||| ||||||||||| | || |||||||| ||  |||||||| |||| || |||||||    
T  12174893 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgttactaatt 12174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 18788045 - 18787913
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||| ||||||||||||||| |||  |||||||||  |||| ||||||||||| ||||| |||||   || ||||||||| ||| ||||||    
T  18788045 tgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttatt-ttttcgtcac 18787949  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||| ||| ||||||||||||||| |||||||    
T  18787948 taatttccatccctaattttgctttttcaagtagtg 18787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 32046880 - 32046984
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||| ||| |||||||||||| ||||| ||||||||||||| || ||||||||||| ||||  ||||||| ||  |||| ||| ||||||||||    
T  32046880 tgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcac 32046979  T
Q  248 taatt 252  Q
    |||||    
T  32046980 taatt 32046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 12370076 - 12369951
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||  ||||||||| | |||||| ||||||||||||||| ||||||||||| |||||||||||       |||||    ||||||||||    
T  12370076 tgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt------catttt----tttccgtcac 12369987  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  12369986 taatttccctcgctaattttgctttttctagtagtg 12369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 13308950 - 13308819
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||| ||||| |||||||||||||||||| | ||| ||||||||||| ||||  ||||||| ||  |||||||| |||| | |||||| |    
T  13308950 aaaaattagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatt 13308851  T
Q  252 tccctccttaattttgctttttctagtagtga 283  Q
    ||||||  |||||||| |||| ||||||||||    
T  13308850 tccctctctaattttgtttttcctagtagtga 13308819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 17200145 - 17200010
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||| ||||  | |||| | ||| ||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  17200145 tgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcac 17200046  T
Q  248 t-aattccctccttaattttgctttttctagtagtg 282  Q
    | | |||||||  |||||||| ||||||||||||||    
T  17200045 tgatttccctcgctaattttgttttttctagtagtg 17200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 29093689 - 29093554
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| ||||||||||| |||||| || |||| ||||||||||||| ||| |||||||||||   || ||| |||| ||  |||||||| |||| |||      
T  29093689 tgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtcct 29093590  T
Q  248 ta-attccctccttaattttgctttttctagtagtg 282  Q
    ||  |||||||||||||||| |||||||||||||||    
T  29093589 tagtttccctccttaattttactttttctagtagtg 29093554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 12806952 - 12806835
Alignment:
Q  168 aaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattt-tattatttccgtcactaa-ttccctccttaattt 265  Q
    ||||| |||||||||||| ||||||||||| |||||||| || ||||  ||||||| |||||||| | || |||| |||||||| |||||||| |||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  266 tgctttttctagtagtga 283  Q
    ||||||| ||| ||||||    
T  12806852 tgcttttcctaatagtga 12806835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 20290449 - 20290321
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||| | ||| ||||||||||||||  ||||||||||||||| |||||||| ||||||   ||||||| ||  |||| ||| ||||||||||||| ||    
T  20290449 aaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcatt-tttccgtcactaattt 20290351  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  ||||||| |||||||||| ||||    
T  20290350 ccctcgctaattttactttttctagcagtg 20290321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 9882167 - 9882071
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||| ||||| | |||| ||||||||||||||||| |||||||||||   ||  ||||||| || ||||||||| |||||||||||||||    
T  9882167 aaaaattagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaatt 9882071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 49881053 - 49881150
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa 250  Q
    |||| |||| |||||| ||| ||||||||||||||||| | || | ||||||||| | |||| |||||| | | |||||||||| |||||||||||||    
T  49881053 aaaaattagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaa 49881150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 52621158 - 52621262
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||| ||||| |||||| | || |||||||| ||| ||||||||  | | ||| ||||| | |||||||||||| ||||| ||||    
T  52621158 tgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttattttttccatcac 52621257  T
Q  248 taatt 252  Q
    |||||    
T  52621258 taatt 52621262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 30673502 - 30673542
Alignment:
Q  152 gaaaatttagagagggaaaacgtgaaatccctctctaattc 192  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  30673502 gaaaatttagtgagggaaaacatgaaatccctctctaattc 30673542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 188
Target Start/End: Original strand, 39040867 - 39040898
Alignment:
Q  157 tttagagagggaaaacgtgaaatccctctcta 188  Q
    ||||||||||||||||||||||||||||||||    
T  39040867 tttagagagggaaaacgtgaaatccctctcta 39040898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 6091385 - 6091319
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatt 220  Q
    ||||||||||| ||||||||| |||| ||| |||||||| ||||   ||||||||||| ||||||||    
T  6091385 aaatttagagatggaaaacgtaaaattcctatctaattctgtcacagaattttgcggcaaaagaatt 6091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 25687409 - 25687355
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgc 208  Q
    ||||||||||| ||||||| | | |||||||||||||||| ||| ||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 25034431 - 25034488
Alignment:
Q  149 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaatttt 206  Q
    |||||||||||| ||||| |||||||||||| | ||| ||||| ||||| ||||||||    
T  25034431 gaggaaaatttaaagaggtaaaacgtgaaattcgtctttaatttcgtcattaaatttt 25034488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 202778 - 202914
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  202778 tgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcac 202877  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
    ||| |||||||  ||||||| ||||||||||||||||    
T  202878 taatttccctcgctaatttttctttttctagtagtga 202914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 3746 - 3881
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| || ||||  |||||||||||||||||||||||    
T  3846 taattttcctcgctaattttgctttttctagtagtg 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 276269 - 276208
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcg 209  Q
    ||||| |||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  276269 tgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcg 276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 9364 - 9229
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  9364 tgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 9265  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||||||||||||||||||    
T  9264 taatttccctcactaattttgctttttctagtagtg 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 26495 - 26622
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| ||||    
T  26495 atttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcc 26594  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
     ||  |||||||||||||||||||||||    
T  26595 gtcactaattttgctttttctagtagtg 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 6114 - 5979
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||    
T  6114 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 6015  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  |||||||| ||||||||||||||    
T  6014 taatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 19615 - 19742
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||||||| ||||    
T  19615 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 19714  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    ||   |||||||||||||||||||||||    
T  19715 cttgctaattttgctttttctagtagtg 19742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 22221 - 22351
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| ||| ||||||||| ||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  253 ccctccttaattttgctttttctagtagtga 283  Q
    |||||  ||||||||||||||||||||||||    
T  22321 ccctcgctaattttgctttttctagtagtga 22351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 283
Target Start/End: Original strand, 58586 - 58722
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||| | ||  |||||||  ||||||||||    
T  58586 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtcac 58685  T
Q  248 taa-ttccctccttaattttgctttttctagtagtga 283  Q
     || |||||||| ||||||||||||| ||||||||||    
T  58686 aaatttccctccctaattttgcttttcctagtagtga 58722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 37922 - 37785
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | |||||||||| |||||||||||||||||||||||| ||||||||||| ||| | ||||||| ||  |||||||| ||||||||||    
T  37922 tgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtcac 37823  T
Q  248 taatt--ccctccttaattttgctttttctagtagtgat 284  Q
    |||||  |||| | |||||||| ||||||||||||||||    
T  37822 taatttcccctgc-taattttgttttttctagtagtgat 37785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 43921 - 44056
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    |||||||||||||| |||||||||||| |||| | ||||||||||||| | ||||||||||| ||||||||||||| ||  |||| ||| ||||| ||||    
T  43921 tgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcac 44020  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||||||||||||    
T  44021 taatttccctcgctaatttttctttttctagtagtg 44056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 121122 - 120987
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||| |||||||| ||| | | ||    
T  121122 tgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataac 121023  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||| |||||| ||||||||    
T  121022 taatttccctctctaattttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 278
Target Start/End: Complemental strand, 84804 - 84678
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||||| ||  |||| ||| |||| |||||||| |    
T  84804 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatt 84705  T
Q  252 tccctccttaattttgctttttctagt 278  Q
    ||||||  |||||||||||||||||||    
T  84704 tccctcactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 8237 - 8110
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||| ||| ||||    
T  8237 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 8138  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||| ||||    
T  8137 ctcgctaattttgctttttctagaagtg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 21969 - 21842
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||  |||| ||| ||||||||| ||| ||||    
T  21969 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtcattaatttcc 21870  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
    |||  |||||||||||||||||| ||||    
T  21869 ctcgctaattttgctttttctagaagtg 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 84307 - 84442
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||| | |||   ||||||| ||  |||| ||| ||||||||||    
T  84307 tgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtcac 84406  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| ||||||   |||||||||||||||||||||||    
T  84407 taatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 7509 - 7643
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||| | ||  |||| ||  ||||||||||    
T  7509 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtcac 7608  T
Q  248 taa-ttccctccttaattttgctttttctagtagt 281  Q
    ||| |||||||  ||||||||||||||||||||||    
T  7609 taatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 15119 - 14990
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||  ||||| | ||  |||| ||| |||| |||||||| ||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||||||||    
T  15019 ccctcgctaattttgctttttctagtagtg 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 10792 - 10663
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| | || |||||||| ||  |||| ||| ||||||||||||| ||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  253 ccctccttaattttgctttttctagtagtg 282  Q
    |||||  |||||||||||||||||| ||||    
T  10692 ccctcgctaattttgctttttctagcagtg 10663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 182539 - 182668
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| ||||||||  || |||||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||| ||| ||||||||||||| |    
T  182539 aaaaattagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatt 182638  T
Q  252 tccctccttaattttgctttttctagtagt 281  Q
    ||||||  ||||||| ||||||||||||||    
T  182639 tccctcgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 219648 - 219775
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttcc 254  Q
    |||||| |||||||||| |||||||||||||||||||||| | |||||||||||   ||| ||||||| ||  |||| ||| ||||||||||||| ||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  255 ctccttaattttgctttttctagtagtg 282  Q
     ||  |||||||||||||||||||||||    
T  219748 gtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 215786 - 215663
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-t 251  Q
    |||| |||| |||||||||||| ||||||||||||||||||||        |||||| |||| |||||||| ||  |||| ||| |||||||| |||| |    
T  215786 aaaaattagtgagggaaaacgtaaaatccctctctaattccgt-------atttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatt 215694  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    || |||  |||||||||||||| ||||||||    
T  215693 tctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 1046 - 918
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagatttta-ttatttccgtcactaa-ttc 253  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||| | ||  |||||| || ||||||||| ||| |||    
T  1046 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgtcagtaatttc 947  T
Q  254 cctccttaattttgctttttctagtagtg 282  Q
    ||||  |||||||||||||||||||||||    
T  946 cctcgctaattttgctttttctagtagtg 918  T

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Target: scaffold0108 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 12657 - 12791
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| | ||  |||| ||| ||||||||||    
T  12657 tgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtcac 12755  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
    ||| |||||||  ||||||||||||||| |||||||    
T  12756 taatttccctcgctaattttgctttttcaagtagtg 12791  T

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Target: scaffold0069 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Original strand, 10162 - 10297
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||  |||||||||| |||||||||||||||||||||||| |||||||||||   ||||||||||| ||  |||||||  ||||||||||    
T  10162 tgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtcac 10261  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||||||||| |||| ||||    
T  10262 aaatttccctccctaattttgcttttcctagcagtg 10297  T

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Target: scaffold0058 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 74676 - 74541
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||  ||||| | ||  |||||||  ||||||||||    
T  74676 tgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtcac 74577  T
Q  248 taa-ttccctccttaattttgctttttctagtagtg 282  Q
     || |||||||| ||||||| ||||| |||||||||    
T  74576 aaatttccctccctaattttacttttcctagtagtg 74541  T

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Target: scaffold0019 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 173456 - 173585
Alignment:
Q  156 atttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaa--tttgtcagagattttattatttccgtcactaattc 253  Q
    |||||| |||||||||| | ||||| |||||||||||||||| ||||||||||| ||||||||  ||| | ||| |||| ||| |||||||||||||||     
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt 173555  T
Q  254 cctccttaattttgctttttctagtagtga 283  Q
    ||||  ||||||||||||||||| ||||||    
T  173556 cctcgctaattttgctttttctaatagtga 173585  T

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Target: scaffold0184 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 7456 - 7592
Alignment:
Q  144 ttaatgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccg 243  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||| |||||| | || || ||||| |   |||| ||| ||||||    
T  7456 ttaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccg 7555  T
Q  244 tcactaa-ttccctccttaattttgctttttctagta 279  Q
    ||||||| || |||| |||||||| ||||||||||||    
T  7556 tcactaattttcctcgttaattttactttttctagta 7592  T

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Target: scaffold0655 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 282
Target Start/End: Complemental strand, 3283 - 3162
Alignment:
Q  162 agagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctt 260  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||| |||   ||||||| ||  | |||||  ||||||||||||| |||||||| |    
T  3283 agagggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctccct 3184  T
Q  261 aattttgctttttctagtagtg 282  Q
    |||||| ||||||||| |||||    
T  3183 aatttttctttttctattagtg 3162  T

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Target: scaffold0035 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 74845 - 74720
Alignment:
Q  156 atttagagagggaaaa-cgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttc 253  Q
    |||||| ||||||||| | ||||||||||||||||||| |||| |||||||| || ||| ||||||||| ||| |||| ||| ||||||||||||| |||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttc 74746  T
Q  254 cctccttaattttgctttttctagta 279  Q
    |||   ||||||||| ||||||||||    
T  74745 ccttgctaattttgccttttctagta 74720  T

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Target: scaffold0023 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 39823 - 39703
Alignment:
Q  163 gagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctcctta 261  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  |||   ||||||  ||  |||| ||| ||||| ||||||| |||||||  ||    
T  39823 gagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgcta 39724  T
Q  262 attttgctttttctagtagtg 282  Q
    |||||||||||||||||||||    
T  39723 attttgctttttctagtagtg 39703  T

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Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 439972 - 440102
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaat- 251  Q
    |||| |||| ||||||||| || |||||||||||||||||||||| |||||||||||  |||  ||||||| ||  |||| ||| ||||||||||||||     
T  439972 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaata 440071  T
Q  252 tccctccttaattttgctttttctagtagtg 282  Q
    | |||   ||||||| |||||||||||||||    
T  440072 ttccttgctaattttactttttctagtagtg 440102  T

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Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 112332 - 112392
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgc 208  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  112332 tgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgc 112392  T

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Target: scaffold0161 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 6805 - 6931
Alignment:
Q  154 aaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-tt 252  Q
    |||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||  | ||  ||||||  |   |||| ||| ||||||||| ||| ||    
T  6805 aaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataattt 6904  T
Q  253 ccctccttaattttgctttttctagta 279  Q
    |||||  ||||||||||||||||||||    
T  6905 ccctcgctaattttgctttttctagta 6931  T

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Target: scaffold0284 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 1649 - 1550
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||| ||||||||||||  || | ||||||||||| |||| |||||| | || ||||||||| |||||||||||||||    
T  1649 aaaaattagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaatt 1550  T

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Target: scaffold0502 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 10896 - 11021
Alignment:
Q  148 tgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcac 247  Q
    ||||| |||||||  |||| ||||| |||||| |||||||||||| |||| ||||||||| | |||| |||||||| ||  |||||||  ||| ||||||    
T  10896 tgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtcac 10995  T
Q  248 taa-ttccctccttaattttgctttt 272  Q
     || |||| ||| |||||||||||||    
T  10996 aaatttccttccctaattttgctttt 11021  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 17701 - 17617
Alignment:
Q  199 taaattttgcggccaaagaatttgtcagagattttattatttccgtcactaa-ttccctccttaattttgctttttctagtagtg 282  Q
    |||| |||||| |||| |||||||| ||  |||| ||| ||||||||||||| |||||||  |||||||| ||||||||||||||    
T  17701 taaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 19268 - 19169
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||||||||||||||||  ||   ||||||||||| ||||  || || | |||||||||||| ||||||||| |||||    
T  19268 aaaaattagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaatt 19169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 36311 - 36410
Alignment:
Q  153 aaaatttagagagggaaaacgtgaaatccctctctaattccgtcagtaaattttgcggccaaagaatttgtcagagattttattatttccgtcactaatt 252  Q
    |||| |||| |||||| ||| ||||||| ||||||||||  || | ||||||||| | |||| |||||| | |  ||||||||| |||||||||||||||    
T  36311 aaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaatt 36410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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