View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1194_low_21 (Length: 263)

Name: NF1194_low_21
Description: NF1194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1194_low_21
NF1194_low_21
[»] chr3 (41 HSPs)
chr3 (85-257)||(17554714-17554886)
chr3 (129-194)||(2667868-2667933)
chr3 (85-174)||(54990728-54990817)
chr3 (129-193)||(53412952-53413016)
chr3 (136-193)||(4222148-4222205)
chr3 (135-180)||(32651449-32651494)
chr3 (135-194)||(4844522-4844581)
chr3 (135-194)||(4870218-4870277)
chr3 (130-193)||(27093367-27093430)
chr3 (129-180)||(30311326-30311377)
chr3 (138-193)||(46518635-46518690)
chr3 (129-175)||(10445144-10445190)
chr3 (137-190)||(18319181-18319234)
chr3 (135-180)||(21960571-21960616)
chr3 (136-180)||(7975438-7975482)
chr3 (129-193)||(10499114-10499178)
chr3 (129-193)||(14186655-14186718)
chr3 (129-193)||(15048066-15048130)
chr3 (129-193)||(16354897-16354961)
chr3 (129-193)||(36720388-36720452)
chr3 (129-180)||(8075132-8075183)
chr3 (121-180)||(11612319-11612378)
chr3 (129-180)||(14339630-14339681)
chr3 (129-180)||(19716217-19716268)
chr3 (129-180)||(37788470-37788521)
chr3 (130-193)||(47810750-47810813)
chr3 (138-176)||(27259185-27259223)
chr3 (129-179)||(51903883-51903933)
chr3 (129-194)||(8170678-8170743)
chr3 (136-193)||(8390644-8390701)
chr3 (136-193)||(31520617-31520674)
chr3 (135-180)||(47236982-47237027)
chr3 (135-171)||(468074-468110)
chr3 (152-192)||(12761520-12761560)
chr3 (146-194)||(16991548-16991596)
chr3 (141-193)||(26481934-26481986)
chr3 (129-193)||(28703409-28703473)
chr3 (118-190)||(39976425-39976497)
chr3 (129-193)||(42799753-42799816)
chr3 (129-173)||(44743860-44743904)
chr3 (129-193)||(47454622-47454686)
[»] chr5 (26 HSPs)
chr5 (135-193)||(30883209-30883267)
chr5 (136-193)||(34984813-34984870)
chr5 (85-180)||(16457830-16457925)
chr5 (129-189)||(16773818-16773878)
chr5 (129-193)||(25627064-25627128)
chr5 (130-194)||(29692392-29692456)
chr5 (129-193)||(30109313-30109377)
chr5 (129-180)||(14285181-14285232)
chr5 (135-194)||(14495816-14495875)
chr5 (135-193)||(21549148-21549206)
chr5 (129-194)||(892479-892544)
chr5 (130-194)||(17155830-17155892)
chr5 (136-180)||(18596013-18596057)
chr5 (129-193)||(22737089-22737153)
chr5 (130-177)||(4793094-4793141)
chr5 (130-177)||(17028270-17028317)
chr5 (129-180)||(43442216-43442267)
chr5 (135-173)||(84851-84889)
chr5 (130-180)||(87429-87479)
chr5 (135-193)||(1410670-1410728)
chr5 (143-193)||(8278294-8278344)
chr5 (135-193)||(16436625-16436682)
chr5 (136-193)||(7918481-7918538)
chr5 (143-180)||(29075801-29075838)
chr5 (143-179)||(15641811-15641847)
chr5 (129-193)||(21589295-21589359)
[»] scaffold0258 (1 HSPs)
scaffold0258 (129-193)||(15328-15392)
[»] chr8 (29 HSPs)
chr8 (85-193)||(28783067-28783175)
chr8 (135-193)||(2203499-2203557)
chr8 (120-193)||(16852347-16852420)
chr8 (129-193)||(3624587-3624651)
chr8 (129-193)||(19703492-19703556)
chr8 (129-180)||(968382-968433)
chr8 (129-180)||(6536540-6536591)
chr8 (129-182)||(27750748-27750801)
chr8 (129-193)||(18540305-18540369)
chr8 (129-193)||(26688872-26688936)
chr8 (96-180)||(29858021-29858105)
chr8 (129-180)||(11819796-11819847)
chr8 (130-193)||(44780120-44780183)
chr8 (136-193)||(11793533-11793590)
chr8 (129-180)||(8794350-8794401)
chr8 (129-180)||(12988448-12988499)
chr8 (129-180)||(23361654-23361705)
chr8 (129-176)||(33017238-33017285)
chr8 (129-180)||(35690069-35690120)
chr8 (136-174)||(3524413-3524451)
chr8 (135-193)||(5264551-5264609)
chr8 (98-180)||(22193338-22193420)
chr8 (135-193)||(22268945-22269002)
chr8 (129-194)||(3058054-3058119)
chr8 (135-180)||(6436566-6436611)
chr8 (135-180)||(12281514-12281559)
chr8 (135-179)||(4435996-4436040)
chr8 (149-193)||(20994483-20994527)
chr8 (129-193)||(23874387-23874451)
[»] chr7 (49 HSPs)
chr7 (129-193)||(22760870-22760934)
chr7 (129-193)||(26459415-26459479)
chr7 (129-193)||(43215191-43215255)
chr7 (139-193)||(42836016-42836070)
chr7 (135-193)||(25021346-25021404)
chr7 (129-193)||(17041017-17041081)
chr7 (129-193)||(20335836-20335900)
chr7 (136-180)||(30442508-30442552)
chr7 (129-193)||(39631851-39631915)
chr7 (129-193)||(43590914-43590978)
chr7 (129-193)||(48771945-48772009)
chr7 (129-180)||(7801200-7801251)
chr7 (130-193)||(22932717-22932780)
chr7 (129-180)||(33222390-33222441)
chr7 (130-180)||(5579240-5579290)
chr7 (135-193)||(23552125-23552183)
chr7 (135-193)||(28236592-28236650)
chr7 (135-193)||(42711965-42712023)
chr7 (135-180)||(3280496-3280541)
chr7 (135-180)||(7721389-7721434)
chr7 (136-193)||(19553461-19553517)
chr7 (141-194)||(36803644-36803697)
chr7 (129-193)||(30579342-30579406)
chr7 (136-180)||(31706445-31706489)
chr7 (129-180)||(14058273-14058324)
chr7 (129-180)||(14368301-14368352)
chr7 (129-192)||(25655233-25655296)
chr7 (138-193)||(45976937-45976992)
chr7 (143-193)||(2446315-2446365)
chr7 (138-180)||(11720974-11721016)
chr7 (144-178)||(15905693-15905727)
chr7 (141-179)||(20952166-20952204)
chr7 (129-179)||(25590632-25590682)
chr7 (136-194)||(25956305-25956362)
chr7 (135-181)||(29785312-29785358)
chr7 (135-192)||(33460433-33460491)
chr7 (136-193)||(5273602-5273659)
chr7 (135-180)||(21877828-21877873)
chr7 (130-179)||(29385749-29385798)
chr7 (136-193)||(38374611-38374668)
chr7 (141-194)||(48984146-48984199)
chr7 (135-179)||(5668582-5668626)
chr7 (135-179)||(21854569-21854613)
chr7 (138-194)||(24438261-24438317)
chr7 (129-193)||(31835199-31835263)
chr7 (129-177)||(33869450-33869498)
chr7 (129-193)||(37085554-37085618)
chr7 (129-193)||(41519269-41519333)
chr7 (149-193)||(48125199-48125243)
[»] chr6 (20 HSPs)
chr6 (129-193)||(33549111-33549175)
chr6 (129-193)||(10338179-10338243)
chr6 (138-193)||(12188317-12188372)
chr6 (130-193)||(31622997-31623060)
chr6 (148-193)||(13441057-13441102)
chr6 (129-170)||(23910116-23910157)
chr6 (129-193)||(14557969-14558033)
chr6 (138-194)||(24641204-24641260)
chr6 (129-193)||(30127407-30127471)
chr6 (134-193)||(22682-22740)
chr6 (129-180)||(6385882-6385933)
chr6 (129-180)||(20213061-20213112)
chr6 (129-180)||(22107084-22107135)
chr6 (143-193)||(21418477-21418527)
chr6 (136-190)||(21943440-21943494)
chr6 (136-194)||(24507548-24507606)
chr6 (135-180)||(3779359-3779404)
chr6 (143-180)||(9433609-9433646)
chr6 (135-180)||(20863395-20863440)
chr6 (135-180)||(28363957-28364002)
[»] chr4 (35 HSPs)
chr4 (129-193)||(37109356-37109420)
chr4 (129-193)||(7292803-7292867)
chr4 (129-185)||(23377971-23378027)
chr4 (129-180)||(38869788-38869839)
chr4 (135-193)||(31759669-31759727)
chr4 (129-178)||(7949459-7949508)
chr4 (129-193)||(19238582-19238646)
chr4 (136-180)||(19680800-19680844)
chr4 (129-193)||(39509077-39509141)
chr4 (129-193)||(49576899-49576963)
chr4 (129-180)||(16581713-16581764)
chr4 (136-175)||(37274471-37274510)
chr4 (135-193)||(21660155-21660213)
chr4 (135-193)||(21668919-21668977)
chr4 (135-180)||(8030215-8030260)
chr4 (135-180)||(17618301-17618346)
chr4 (135-180)||(24234665-24234710)
chr4 (137-193)||(37720227-37720283)
chr4 (129-193)||(55427205-55427269)
chr4 (129-180)||(24827845-24827896)
chr4 (135-174)||(32992638-32992677)
chr4 (129-172)||(46329192-46329235)
chr4 (135-174)||(47202434-47202473)
chr4 (135-178)||(53496899-53496942)
chr4 (129-175)||(2622400-2622446)
chr4 (135-193)||(13901749-13901807)
chr4 (135-193)||(46545718-46545776)
chr4 (135-193)||(51250533-51250591)
chr4 (135-180)||(1730500-1730545)
chr4 (143-180)||(13015447-13015484)
chr4 (129-194)||(43728401-43728466)
chr4 (129-174)||(46295123-46295168)
chr4 (136-180)||(8325391-8325435)
chr4 (136-180)||(11592165-11592209)
chr4 (135-191)||(12821977-12822033)
[»] chr2 (36 HSPs)
chr2 (129-193)||(42327400-42327464)
chr2 (129-193)||(29503278-29503342)
chr2 (129-193)||(37480082-37480146)
chr2 (129-180)||(12086134-12086185)
chr2 (135-193)||(30359661-30359719)
chr2 (136-193)||(42602561-42602618)
chr2 (130-190)||(11251097-11251157)
chr2 (129-193)||(39714999-39715063)
chr2 (129-176)||(4262307-4262354)
chr2 (130-193)||(19322775-19322838)
chr2 (129-192)||(21213777-21213840)
chr2 (129-180)||(23052528-23052579)
chr2 (135-189)||(12994387-12994441)
chr2 (135-193)||(37755982-37756040)
chr2 (136-193)||(1729823-1729880)
chr2 (136-193)||(16918590-16918647)
chr2 (139-180)||(30410564-30410605)
chr2 (135-180)||(42420289-42420334)
chr2 (129-193)||(42922421-42922486)
chr2 (129-193)||(19244116-19244180)
chr2 (118-193)||(3697394-3697468)
chr2 (135-194)||(17737635-17737693)
chr2 (129-180)||(21195681-21195732)
chr2 (129-180)||(28846711-28846762)
chr2 (135-174)||(36538874-36538913)
chr2 (135-193)||(19016038-19016096)
chr2 (135-193)||(26545847-26545905)
chr2 (143-180)||(7799054-7799091)
chr2 (129-194)||(13803501-13803566)
chr2 (129-194)||(23140917-23140982)
chr2 (129-194)||(23552707-23552772)
chr2 (144-193)||(29197396-29197445)
chr2 (143-180)||(41504955-41504992)
chr2 (119-179)||(26482114-26482173)
chr2 (129-192)||(33569863-33569927)
chr2 (129-169)||(33839265-33839305)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-193)||(94976-95040)
[»] chr1 (41 HSPs)
chr1 (129-193)||(9165200-9165264)
chr1 (129-193)||(15786325-15786389)
chr1 (135-194)||(10526829-10526888)
chr1 (136-193)||(31794276-31794333)
chr1 (136-193)||(36371477-36371534)
chr1 (129-193)||(33700778-33700842)
chr1 (129-193)||(52116786-52116850)
chr1 (130-189)||(952522-952581)
chr1 (129-180)||(6122814-6122865)
chr1 (129-180)||(8177187-8177238)
chr1 (135-193)||(40257406-40257464)
chr1 (138-180)||(44046162-44046204)
chr1 (135-180)||(9643820-9643865)
chr1 (141-194)||(51703785-51703838)
chr1 (129-193)||(4566555-4566619)
chr1 (135-179)||(9570664-9570708)
chr1 (129-193)||(19528332-19528396)
chr1 (129-193)||(27223135-27223199)
chr1 (144-180)||(31383818-31383854)
chr1 (129-180)||(2799882-2799933)
chr1 (130-193)||(4824978-4825041)
chr1 (129-180)||(16169983-16170034)
chr1 (138-193)||(24047116-24047171)
chr1 (130-193)||(37046992-37047054)
chr1 (129-180)||(52336779-52336830)
chr1 (130-176)||(9964462-9964508)
chr1 (136-194)||(11063562-11063620)
chr1 (135-193)||(17745267-17745325)
chr1 (135-193)||(37400281-37400339)
chr1 (135-193)||(41508838-41508896)
chr1 (135-193)||(43445970-43446028)
chr1 (135-180)||(21184399-21184444)
chr1 (136-177)||(21268005-21268046)
chr1 (135-171)||(12370192-12370228)
chr1 (135-171)||(17297013-17297049)
chr1 (129-193)||(21547485-21547549)
chr1 (149-193)||(26232411-26232455)
chr1 (135-179)||(31605859-31605903)
chr1 (136-180)||(35562745-35562789)
chr1 (136-180)||(39012311-39012354)
chr1 (135-175)||(50901607-50901647)
[»] scaffold0194 (1 HSPs)
scaffold0194 (129-190)||(13051-13112)
[»] scaffold0299 (1 HSPs)
scaffold0299 (129-180)||(11548-11599)
[»] scaffold0180 (1 HSPs)
scaffold0180 (129-180)||(19967-20018)
[»] scaffold0291 (1 HSPs)
scaffold0291 (129-194)||(2475-2540)
[»] scaffold0122 (1 HSPs)
scaffold0122 (129-194)||(6924-6989)
[»] scaffold0126 (1 HSPs)
scaffold0126 (129-180)||(25352-25403)
[»] scaffold0517 (1 HSPs)
scaffold0517 (135-193)||(7737-7795)
[»] scaffold0337 (1 HSPs)
scaffold0337 (136-194)||(1759-1817)
[»] scaffold0065 (1 HSPs)
scaffold0065 (136-194)||(12195-12253)
[»] scaffold0101 (1 HSPs)
scaffold0101 (135-195)||(43343-43403)
[»] scaffold0070 (1 HSPs)
scaffold0070 (149-193)||(38927-38971)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 4e-81; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 85 - 257
Target Start/End: Complemental strand, 17554886 - 17554714
Alignment:
Q  85 gaagaacctagattagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaa 184  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  17554886 gaagaacctagattagcccacgtgaattggctacgaggagcatggaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccaccaaa 17554787  T
Q  185 ccaacccaaaatccagcttaattaaactatcatttcaaccattctcatttcacaatttcatagtcctttaaat 257  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17554786 ccaacccaaaatccagcttaattaaactaacatttcaaccattctcatttcacaatttcatagtcctttaaat 17554714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 2667933 - 2667868
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2667933 gaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaaa 2667868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 54990817 - 54990728
Alignment:
Q  85 gaagaacctagattagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    |||||| ||| |||||||||| | |||||||  ||||||| || ||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  54990817 gaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 53413016 - 53412952
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||||||||  |||||||||||||| | ||||||||||    
T  53413016 gaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaa 53412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 4222205 - 4222148
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||| || |||||||||    
T  4222205 agactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaa 4222148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 32651449 - 32651494
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||    
T  32651449 gagatcttgaggaggagcacactcccaggtcccaagccaataccac 32651494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 4844522 - 4844581
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| ||||| |||||||||||||| ||||||| ||||||||| | |||||||||||    
T  4844522 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaa 4844581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 4870218 - 4870277
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| ||||| |||||||||||||| ||||||| ||||||||| | |||||||||||    
T  4870218 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaa 4870277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 27093367 - 27093430
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||||||||| ||||||||||||| || ||||||||||||||| |  |||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaa 27093430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 30311377 - 30311326
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||| |||||||    
T  30311377 gaacctgagaccttgaggaggagcacactcccagatcccaagcctataccac 30311326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 46518690 - 46518635
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |  |||||||||    
T  46518690 accttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaa 46518635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 10445144 - 10445190
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaat 175  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  10445144 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 18319181 - 18319234
Alignment:
Q  137 gaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacc 190  Q
    |||||||| || ||||||||||||||||||||| |||||||||| || ||||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaataccaccaagccaacc 18319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 21960616 - 21960571
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||    
T  21960616 gagacctcgaggaggagcacactctcaggtcccaagccaataccac 21960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 7975482 - 7975438
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||    
T  7975482 agaccttgaggaggagcacactcccagatcccaagcctataccac 7975438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 10499114 - 10499178
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||  |||||||||| |||||||| ||||||||||||||||| |  |||||||||    
T  10499114 gaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaa 10499178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 14186718 - 14186655
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| ||||||||| |  |||||||||    
T  14186718 gaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccactaggccaacccaa 14186655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 15048066 - 15048130
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||| |||||| ||||||||| ||||||  || |||||||||    
T  15048066 gaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaa 15048130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 16354897 - 16354961
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||| |||||| |||||||||| ||||| ||||||||||||||| |  |||||||||    
T  16354897 gaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaa 16354961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 36720452 - 36720388
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| || |||| ||||| |||||||||||||  ||||||||||||||||| | ||||||||||    
T  36720452 gaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaa 36720388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 8075132 - 8075183
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| || |||||||||| ||||||||||||| |||||||||| |||||||    
T  8075132 gaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccac 8075183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 11612378 - 11612319
Alignment:
Q  121 ggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||| ||||| |||||||| |||| |||||||||||||| |||||||  ||||||||    
T  11612378 ggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccac 11612319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 14339681 - 14339630
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||| ||||||| |||||||||||||  |||||||||||||||||    
T  14339681 gaacctgagacattgaggaggagcacactcccaaatcccaagccaataccac 14339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 19716268 - 19716217
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||||| |||||    
T  19716268 gaaccagagaccttgaggaggagcacactccatggtcccaagccaacaccac 19716217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 37788470 - 37788521
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||| |||| ||||| |||||||||    
T  37788470 gaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccac 37788521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 47810750 - 47810813
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||||| ||| ||||||||||||| | || ||||||||||||| | ||||||||||    
T  47810750 aacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaa 47810813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 27259223 - 27259185
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaata 176  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  27259223 acctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 51903883 - 51903933
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||| ||||||  ||||| |||||||||||||| ||||||||||||||||    
T  51903883 gaacctgagaccacgaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 8170743 - 8170678
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||||||||| | ||||||||||||| ||  |||||||||||||| |  ||||||||||    
T  8170743 gaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaa 8170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 8390701 - 8390644
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||||| | ||||| ||||    
T  8390701 agaccttgaggaagagcacacttccaagtctcaaggcaataccactagaccaatccaa 8390644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 31520617 - 31520674
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||| ||||| |||||||||||||| |||||||||||| |||| |  |||||||||    
T  31520617 agacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaa 31520674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 47236982 - 47237027
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||| || |||||||||||| |||||||| ||||||||||    
T  47236982 gagaccttgaagaggagcacactcccgggtcccaaaccaataccac 47237027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 468110 - 468074
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagc 171  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  468110 gagaccttgaggaagagcacacttccaggttccaagc 468074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 12761560 - 12761520
Alignment:
Q  152 cacactcccaggtcccaagccaataccacgaaaccaaccca 192  Q
    ||||||||||||||||||| ||||||||| | |||||||||    
T  12761560 cacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 16991596 - 16991548
Alignment:
Q  146 gaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||| |||||||||| ||||||||||||||||| |  ||||||||||    
T  16991596 gaagagtacactcccagatcccaagccaataccaccaggccaacccaaa 16991548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 26481986 - 26481934
Alignment:
Q  141 ttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| |||||||||| |||||||||||||| |||||| || | |||||||    
T  26481986 ttgaggaggagcacactctcaggtcccaagccattaccaccaagctaacccaa 26481934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 28703409 - 28703473
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||||| || |||||||||||||| |||||||| |||| |||   ||||||||||    
T  28703409 gaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaa 28703473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 39976425 - 39976497
Alignment:
Q  118 cgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacc 190  Q
    ||||||| || ||||  ||||||||||| | |||||||||| || |||||||| |||||||||  ||||||||    
T  39976425 cgaggaggatcgaacttgagaccttgagaaggagcacactctcaagtcccaagtcaataccaccgaaccaacc 39976497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 42799753 - 42799816
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||| | ||||||||||| |||||||||||||| ||||| |  |||||||||    
T  42799753 gaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaa 42799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 44743860 - 44743904
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagcca 173  Q
    ||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  44743860 gaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 47454622 - 47454686
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| ||||||||||| || || |||||||||||||| | | ||||||||    
T  47454622 gaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaa 47454686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 30883209 - 30883267
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  30883209 gagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaa 30883267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 34984870 - 34984813
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||    
T  34984870 agaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaa 34984813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 16457925 - 16457830
Alignment:
Q  85 gaagaacctagattagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||| | |||||||||  ||||| |  || |||| || ||||  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16457925 gaagaacctaaactagcccacgcaaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccac 16457830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 16773878 - 16773818
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaac 189  Q
    ||||| ||||||| ||||| |||||||||||||||||||||| ||||||||| | ||||||    
T  16773878 gaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaac 16773818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 25627128 - 25627064
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||||||| |  |||||||||    
T  25627128 gaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaa 25627064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 29692392 - 29692456
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||| ||||| ||||||| |||||||||||||| |||||| |||||||||| | |||||||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaa 29692456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 30109313 - 30109377
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||  |||| ||||||||||||||||| |||||||||||||| || |||||||||    
T  30109313 gaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaa 30109377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 14285232 - 14285181
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  14285232 gaacctgagaccttgaggaggagcacactcccaggttccaagccaattccac 14285181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 14495816 - 14495875
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| ||||| |||||||||||||| ||||||| ||||||||| | |||||||||||    
T  14495816 gagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaa 14495875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 21549148 - 21549206
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| || |||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  21549148 gagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 21549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 892479 - 892544
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||||||||||| ||| ||||||  |||||||||||||||||||| |  ||||||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaa 892544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 17155892 - 17155830
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||| ||||||||||||| |||||| |||  ||||||||| |||||||||| |||||||||||||    
T  17155892 aacctgagaccttgaggaggagcactctc--aggtcccaaaccaataccactaaaccaacccaaa 17155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 18596013 - 18596057
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  18596013 agaccttgaggaggagcacattcccaggtcacaagccaataccac 18596057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 22737153 - 22737089
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| ||| ||| ||||||||| ||| |||||||||||||||||| | ||||||||||    
T  22737153 gaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaa 22737089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 4793094 - 4793141
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaatac 177  Q
    |||| ||||||| ||||| ||||||||||||||||||||| |||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 17028270 - 17028317
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaatac 177  Q
    |||| ||||||||||||| ||||||||||||| ||||||| |||||||    
T  17028270 aacctgagaccttgaggaggagcacactcccaagtcccaacccaatac 17028317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 43442267 - 43442216
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||| || ||| ||||||||||    
T  43442267 gaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccac 43442216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 84889 - 84851
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagcca 173  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  84889 gagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 87429 - 87479
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||| ||||||||||||| |||||||||||||| | ||||| |||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccac 87479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 1410670 - 1410728
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| |||||||||||||  ||||||| ||||||||| | ||||||||||    
T  1410670 gagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 8278294 - 8278344
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||  | ||||||||||    
T  8278294 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaa 8278344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 16436682 - 16436625
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||| |  |||||||||    
T  16436682 gagaccttgaggaggagcacact-ccaagtcccaagccaataccactaggccaacccaa 16436625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 7918481 - 7918538
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| |||  ||||||||||| ||||||||||||||| |  |||||||||    
T  7918481 agaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaa 7918538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 29075838 - 29075801
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  29075838 gaggaggagcacactcccagatcccaagccaataccac 29075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 15641811 - 15641847
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  15641811 gaggacgagcacactcccaggtcccaagtcaatacca 15641847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 21589359 - 21589295
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| | |||||  |||| |||||||||||||||||||||||||| |  |||||||||    
T  21589359 gaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaa 21589295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 15328 - 15392
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  15328 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaa 15392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 28783175 - 28783067
Alignment:
Q  85 gaagaacctagattagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaa 184  Q
    |||||| ||| ||||||||||   ||||| |  ||||||| || ||||  ||||||||||||| ||||||||||||||||| |||||||||||||| ||     
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaag 28783076  T
Q  185 ccaacccaa 193  Q
    |||||||||    
T  28783075 ccaacccaa 28783067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 2203557 - 2203499
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  2203557 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 2203499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 16852420 - 16852347
Alignment:
Q  120 aggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| || ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  16852420 aggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 16852347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 3624651 - 3624587
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||||| |  |||||||||    
T  3624651 gaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaa 3624587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 19703492 - 19703556
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||||||    
T  19703492 gaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaa 19703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 968433 - 968382
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  968433 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 6536591 - 6536540
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6536591 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 27750801 - 27750748
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacga 182  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  27750801 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacga 27750748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 18540369 - 18540305
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||    
T  18540369 gaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaa 18540305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 26688936 - 26688872
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||| ||||| |  |||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaa 26688872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 29858021 - 29858105
Alignment:
Q  96 attagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||| | ||||| |  ||||| | || ||||| ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  29858021 attagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccac 29858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 11819847 - 11819796
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  11819847 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 11819796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 44780120 - 44780183
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||| |||| |  |||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaa 44780183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 11793533 - 11793590
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| ||||||||||| ||||||||||| || ||||| | ||||||||||    
T  11793533 agaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaa 11793590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 8794350 - 8794401
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||||| |||||| ||||||||| |||||| |||||||||||||||    
T  8794350 gaacctgagaccctgaggaggagcacacttccaggttccaagccaataccac 8794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 12988499 - 12988448
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| || |||||||||| ||||||||| |||||| |||||||||||||||    
T  12988499 gaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccac 12988448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 23361654 - 23361705
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||  ||||||| |||||||||    
T  23361654 gaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccac 23361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 33017285 - 33017238
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaata 176  Q
    ||||| ||||||||||||| ||||||||| |||||| |||||||||||    
T  33017285 gaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 35690069 - 35690120
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||| || ||||| |||||||||||||||||    
T  35690069 gaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccac 35690120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 3524413 - 3524451
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  3524413 agaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 5264609 - 5264551
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| ||||||| |||||||| ||||||||||||||| |  |||||||||    
T  5264609 gagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaa 5264551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 22193338 - 22193420
Alignment:
Q  98 tagcccacgtgaattgcctacgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||| | |||||||| ||  ||| || |||||  |||||||||||| ||||||||||||||| |||||| ||| |||||    
T  22193338 tagcccacttaaattgccttcggagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 22268945 - 22269002
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||| |  |||||||||    
T  22268945 gagaccttgag-aagagcacactccaaggtcccaagccaacaccaccaggccaacccaa 22269002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 3058054 - 3058119
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| |||||||||  || ||||||||||||| | ||||| |||||||||| | |||||||||||    
T  3058054 gaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaaa 3058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 6436566 - 6436611
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  6436566 gagaccttgcggaggagcacactcctaagtcccaagccaataccac 6436611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 12281559 - 12281514
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||| ||||| | |||||||| |||||||||||||||||||||    
T  12281559 gagacctcgaggaggggcacactctcaggtcccaagccaataccac 12281514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 4436040 - 4435996
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||||||||||| |||||| |||||| ||| |||||||||||||    
T  4436040 gagaccttgaggaggagcactctcccatgtctcaagccaatacca 4435996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 20994483 - 20994527
Alignment:
Q  149 gagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||    
T  20994483 gagcacactcccaggtcccaagtcaataccactaggccaacccaa 20994527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 23874387 - 23874451
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| | ||| | |||||||||||||||||||||||| |  |||||||||    
T  23874387 gaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaa 23874451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 22760934 - 22760870
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||    
T  22760934 gaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaa 22760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 26459415 - 26459479
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  26459415 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 26459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 43215255 - 43215191
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||    
T  43215255 gaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaa 43215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 42836016 - 42836070
Alignment:
Q  139 ccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaa 42836070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 25021346 - 25021404
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  25021346 gagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 25021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 17041017 - 17041081
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||| |||| |||||||||||| |||| | ||||||||||    
T  17041017 gaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaa 17041081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 20335836 - 20335900
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| ||||||||||||| |||||||||||||||| | | ||||||||||    
T  20335836 gaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaa 20335900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 30442552 - 30442508
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  30442552 agaccttgaggaggagcaaactcccaggtcccaagccaataccac 30442508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 39631915 - 39631851
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||  |||||||||||||||||||||||||| |  |||||||||    
T  39631915 gaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaa 39631851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 43590978 - 43590914
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  43590978 gaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 43590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 48772009 - 48771945
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||  |||| |||||||||||||| ||||||||||||||||| || |||||||||    
T  48772009 gaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaa 48771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 7801251 - 7801200
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||||||||| || |||||||||||||||||||||| |||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccac 7801200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 22932717 - 22932780
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| |||| |||||  |||||| ||||||||||||||||||||||||||| | ||||||||||    
T  22932717 aacctgagatcttgaataagagcgcactcccaggtcccaagccaataccaccataccaacccaa 22932780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 33222441 - 33222390
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  33222441 gaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccac 33222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 5579240 - 5579290
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| |||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccac 5579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 23552183 - 23552125
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||| |  |||||||||    
T  23552183 gagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaa 23552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 28236592 - 28236650
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||  ||| ||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagccaataccatcaaatcaacccaa 28236650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 42712023 - 42711965
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| ||||||||||||| || |||||| |||||||| || |||||||||    
T  42712023 gagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaa 42711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 3280496 - 3280541
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||    
T  3280496 gagaccttgaggaggagcacactctcgggtcccaagccaataccac 3280541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 7721434 - 7721389
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  7721434 gagaccttgaggaggagtacactcccaggtcccaaaccaataccac 7721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 19553517 - 19553461
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |  |||||||||    
T  19553517 agaccttgaggaggagcacactcccaggt-ccaagccaataccaccaggccaacccaa 19553461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 36803644 - 36803697
Alignment:
Q  141 ttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| ||||| |||||||||||||||| ||||||||| | |||||||||||    
T  36803644 ttgaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaaa 36803697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 30579406 - 30579342
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| | | ||||||||||||| |||||||||||||| |  |||||||||    
T  30579406 gaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaa 30579342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 31706489 - 31706445
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||    
T  31706489 agaccttgacgatgagcacactcccaggtcccaaaccaataccac 31706445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 14058324 - 14058273
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  14058324 gaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 14368352 - 14368301
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  14368352 gaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 25655233 - 25655296
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaaccca 192  Q
    ||||| || |||||||||| || ||||||| ||| ||||||| ||||||||| |||||||||||    
T  25655233 gaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaaccca 25655296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 45976937 - 45976992
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||| ||||||||||||||||| |||||||||||||| |  |||||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaa 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 2446365 - 2446315
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||  | ||||||||||    
T  2446365 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaa 2446315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 11720974 - 11721016
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  11720974 accttaaggaggagcacattcccaggtcccaagccaataccac 11721016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 15905693 - 15905727
Alignment:
Q  144 aggaagagcacactcccaggtcccaagccaatacc 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaatacc 15905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 20952166 - 20952204
Alignment:
Q  141 ttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  20952166 ttgaggaggagcacactcccaggtcccaaaccaatacca 20952204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 25590682 - 25590632
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||| ||||||| ||||| |||||||||||||| || |||||||||||||    
T  25590682 gaacccgagacctcgaggaggagcacactcccagatctcaagccaatacca 25590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 25956305 - 25956362
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| |  ||||||||||    
T  25956305 agaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaaa 25956362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 29785312 - 29785358
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacg 181  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  29785312 gagaccttgaggaggagcacacttccagatcccaagcctataccacg 29785358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 33460433 - 33460491
Alignment:
Q  135 gagaccttga-ggaagagcacactcccaggtcccaagccaataccacgaaaccaaccca 192  Q
    |||||||||| ||| || |||||||| ||||||||| |||||||||| |||||||||||    
T  33460433 gagaccttgaaggaggaccacactcctaggtcccaaaccaataccaccaaaccaaccca 33460491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 5273602 - 5273659
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| ||||||||||  |||||||||||||| ||||| |  |||||||||    
T  5273602 agaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaa 5273659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 21877873 - 21877828
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||    
T  21877873 gagaccttaaggaggagcaccctcccaggtcccaagtcaataccac 21877828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 29385749 - 29385798
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    |||| ||||||||||||| ||||||||||| | |||||||||||| ||||    
T  29385749 aacctgagaccttgaggaggagcacactccaaagtcccaagccaacacca 29385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 38374611 - 38374668
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| ||||||||||  |||||||||||||| ||||| |  |||||||||    
T  38374611 agaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaa 38374668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 48984146 - 48984199
Alignment:
Q  141 ttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| ||||||||||||| |||||||||| ||||||| | | |||||||||    
T  48984146 ttgaggaggagcacactcccaagtcccaagcctataccactagagcaacccaaa 48984199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 5668582 - 5668626
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||||| ||||| ||||||||| ||| |||||||||||||||||    
T  5668582 gagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 21854613 - 21854569
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||| ||||||| |||||||||||||| |||| |||||||||||    
T  21854613 gagactttgaggaggagcacactcccagatccctagccaatacca 21854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 24438261 - 24438317
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| || ||||||||||||||| ||||||| |||||||||| ||  |||||||||    
T  24438261 accttaagaaagagcacactcccaagtcccaaaccaataccactaagtcaacccaaa 24438317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 31835263 - 31835199
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||| ||  |||||||||| ||||| |  |||||||||    
T  31835263 gaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaa 31835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 33869450 - 33869498
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaatac 177  Q
    ||||| ||||||||||| | ||||||||| ||||||| |||||||||||    
T  33869450 gaaccagagaccttgagaaggagcacacttccaggtctcaagccaatac 33869498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 37085554 - 37085618
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| || |||| ||||| |||||||||||||  ||||||||||||||||| |  |||||||||    
T  37085554 gaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 41519269 - 41519333
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||| |  ||||||| ||||||||| |  |||||||||    
T  41519269 gaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaa 41519333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 48125199 - 48125243
Alignment:
Q  149 gagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||| |||||||||||||| ||||| | ||||||||||    
T  48125199 gagcacactccaaggtcccaagccaacaccaccagaccaacccaa 48125243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 33549175 - 33549111
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  33549175 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaa 33549111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 10338179 - 10338243
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |  |||||||||    
T  10338179 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaa 10338243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 12188317 - 12188372
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 12188372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 31622997 - 31623060
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||   ||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaa 31623060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 13441102 - 13441057
Alignment:
Q  148 agagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||||||||||||||||||||||||   ||||||||||    
T  13441102 agagcacactcccaggtcccaagccaataccacccgaccaacccaa 13441057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 23910116 - 23910157
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaag 170  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  23910116 gaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 14558033 - 14557969
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||  ||||| ||||||||| |||||||||||||||| ||||| | ||||||||||    
T  14558033 gaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaa 14557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 24641204 - 24641260
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||| ||||| |||||||||||||| ||||||| ||||||||| || ||||||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaa 24641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 30127471 - 30127407
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| || || ||||||||||||||  |||||||||||||||| | ||||||||||    
T  30127471 gaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaa 30127407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 22682 - 22740
Alignment:
Q  134 ggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||| |  |||||||||    
T  22682 ggagaccttgag-aagagcacactccaaggtcccaagccaaaaccactagcccaacccaa 22740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 6385933 - 6385882
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||||||| |||| ||||||| |||||||||||||| |||||||||    
T  6385933 gaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 20213112 - 20213061
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||  |||||||    
T  20213112 gaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 20213061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 22107135 - 22107084
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||  |||||||    
T  22107135 gaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 22107084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 21418527 - 21418477
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  21418527 gaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 21418477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 21943440 - 21943494
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacc 190  Q
    |||||| |||||||| ||||||| ||||||||||| ||||| |||||| ||||||    
T  21943440 agacctcgaggaagaacacactctcaggtcccaagtcaatatcacgaagccaacc 21943494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 24507548 - 24507606
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||||| |  ||||||||||    
T  24507548 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaaa 24507606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 3779404 - 3779359
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||| | ||||||||||||| ||| ||||||||||||||    
T  3779404 gagaccttgagaaggagcacactcccaagtctcaagccaataccac 3779359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 9433609 - 9433646
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  9433609 gaggaagagcacactcccagatcccaagtcaataccac 9433646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 20863440 - 20863395
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||    
T  20863440 gagaccttgaggaggagcacactccaaagtcccaagccaacaccac 20863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 28364002 - 28363957
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| |||||||||| ||| |||||| ||||||||||    
T  28364002 gagaccttgaggaggagcacactcgcagatcccaaaccaataccac 28363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 37109356 - 37109420
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  37109356 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 37109420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 7292803 - 7292867
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| ||||||| |||||||||||||||| ||||||||||||||| | ||||||||||    
T  7292803 gaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaa 7292867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 23378027 - 23377971
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaac 185  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  23378027 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacactaaac 23377971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 38869839 - 38869788
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  38869839 gaacctgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 31759669 - 31759727
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| | | ||||||||    
T  31759669 gagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaa 31759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 7949459 - 7949508
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaatacc 178  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  7949459 gaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 19238582 - 19238646
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  19238582 gaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 19238646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 19680800 - 19680844
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  19680800 agaccttgaggaagagcacactcccaagtcccaagcgaataccac 19680844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 39509141 - 39509077
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| |||||||||||||| |||||||||| ||||| || ||||||||||    
T  39509141 gaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaa 39509077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 49576899 - 49576963
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||||| |||| ||||||||||||| |  |||||||||    
T  49576899 gaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 16581764 - 16581713
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  16581764 gaacctgagaccttgaggaggagcagactcccaggttccaagccaataccac 16581713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 37274471 - 37274510
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaat 175  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  37274471 agaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 21660155 - 21660213
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| |||||||||||||||||||| || |||| ||||||||| | ||||||||||    
T  21660155 gagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaa 21660213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 21668919 - 21668977
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| |||||||||||||||||||| || |||| ||||||||| | ||||||||||    
T  21668919 gagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaa 21668977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 8030215 - 8030260
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  8030215 gagaccttgaggaggagcacactcccaagtcccaagcctataccac 8030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 17618346 - 17618301
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  17618346 gagacctcgaggaggagcacactcccaggtctcaagccaataccac 17618301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 24234710 - 24234665
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||    
T  24234710 gagaccttcaggatgagcacactcccaagtcccaagccaataccac 24234665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 37720227 - 37720283
Alignment:
Q  137 gaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||| | |||||||||||||||||||||||||| ||| |  |||||||||    
T  37720227 gaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaa 37720283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 55427205 - 55427269
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||| | ||||| |||||||||||||||||||||||||| |  |||||||||    
T  55427205 gaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaa 55427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 24827896 - 24827845
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccac 24827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 32992677 - 32992638
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  32992677 gagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 46329235 - 46329192
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagcc 172  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  46329235 gaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 47202434 - 47202473
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  47202434 gagaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 53496942 - 53496899
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacc 178  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  53496942 gagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 2622400 - 2622446
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaat 175  Q
    ||||| ||||| | ||||| |||||||||||||||||||||||||||    
T  2622400 gaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 13901807 - 13901749
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||  |||| || |||||||||||||| |||||||||||||| | ||||||||||    
T  13901807 gagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaa 13901749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 46545776 - 46545718
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| |||||||| |||||||||| |||||| |||||||||||||| |  |||||||||    
T  46545776 gagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaa 46545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 51250533 - 51250591
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| |||||||  |||||||||||||| ||||||||||||||||| |  |||||||||    
T  51250533 gagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaa 51250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 1730500 - 1730545
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||| || |||||||||| |||||||||||||||||||||    
T  1730500 gagactttgaagaggagcacactctcaggtcccaagccaataccac 1730545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 13015484 - 13015447
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  13015484 gaggaggagcacactcccaagtcccaagccaataccac 13015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 43728466 - 43728401
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||| ||||||| |||||||||||||| ||  ||| ||||||||| | |||||||||||    
T  43728466 gaacctgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaacccaaa 43728401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 46295168 - 46295123
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||||||    
T  46295168 gaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 8325391 - 8325435
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||||| ||||||||||| ||||| |||||||| |||||    
T  8325391 agaccttgaggatgagcacactccaaggtctcaagccaacaccac 8325435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 11592165 - 11592209
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||||    
T  11592165 agacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 12822033 - 12821977
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaaccc 191  Q
    ||||||||||  | |||||||||||||| ||||||| ||||| ||| ||||||||||    
T  12822033 gagaccttgaacaggagcacactcccagatcccaagtcaatatcaccaaaccaaccc 12821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 42327400 - 42327464
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  42327400 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 42327464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 29503342 - 29503278
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |  |||||||||    
T  29503342 gaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaa 29503278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 37480146 - 37480082
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||||||    
T  37480146 gaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaa 37480082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 12086134 - 12086185
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  12086134 gaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccac 12086185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 30359719 - 30359661
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| || |||||||||    
T  30359719 gagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaa 30359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 42602618 - 42602561
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||| | |||||||||||||||||||||||||||||||| |  |||||||||    
T  42602618 agaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaa 42602561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 11251157 - 11251097
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacc 190  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||||| || ||||||    
T  11251157 aacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacc 11251097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 39715063 - 39714999
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||| ||||| |||||||||||||||||||||| ||||||||| |  |||||||||    
T  39715063 gaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaa 39714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 4262307 - 4262354
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaata 176  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  4262307 gaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 19322838 - 19322775
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| |||||||||| || ||||||||||||||||||||| |||||||||| | | ||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaa 19322775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 21213840 - 21213777
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaaccca 192  Q
    ||||| |||||||  |||| || ||||||||||||||||||||||||||||| | |||||||||    
T  21213840 gaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 23052528 - 23052579
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||||||    
T  23052528 gaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccac 23052579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 12994387 - 12994441
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaac 189  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||| | ||||||    
T  12994387 gagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaac 12994441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 37755982 - 37756040
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||| | ||||||| |||||||||||||||||||||||| || |||||||||    
T  37755982 gagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaa 37756040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 1729880 - 1729823
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaa 1729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 16918590 - 16918647
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| |||||||||||||| |||||| |||||||||| |  |||||||||    
T  16918590 agaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaa 16918647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 30410564 - 30410605
Alignment:
Q  139 ccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  30410564 ccttgaggaggagcacactcctaggtcccaagccaataccac 30410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 42420334 - 42420289
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||    
T  42420334 gagaccttgagtaagagcacactctcaggtcctaagccaataccac 42420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 42922486 - 42922421
Alignment:
Q  129 gaaccggagacctt-gaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||| ||||| |||||||||||||||| ||||||||||||||| |  |||||||||    
T  42922486 gaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaa 42922421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 19244180 - 19244116
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||| ||||||||  | ||||||||||    
T  19244180 gaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaa 19244116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 3697394 - 3697468
Alignment:
Q  118 cgaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| || ||||| ||||||||||| | |||||| |||| |||||||||||||||||||  | ||||||||||    
T  3697394 cgaggagaatcgaaccagagaccttgag-aggagcactctccaaggtcccaagccaataccatcagaccaacccaa 3697468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 17737635 - 17737693
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||  ||||||||||||    
T  17737635 gagaccttgaggaggagcacactcccaagtcacaaaccaataccac-taaccaacccaaa 17737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 21195681 - 21195732
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||| |||||||    
T  21195681 gaacctgagaccttgaggaggagcacactcccaagttccaagcctataccac 21195732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 28846762 - 28846711
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||| | ||||| |||||||||||||||||||||| |||||||||    
T  28846762 gaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccac 28846711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 36538913 - 36538874
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaa 174  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  36538913 gagaccttgaggaagagcacattccaaggtcccaagccaa 36538874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 19016096 - 19016038
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| ||||||||||||| ||| |||||||||||||  | ||||||||||    
T  19016096 gagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaa 19016038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 26545905 - 26545847
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||| | ||||||||| |||| |||||||| |||||||| ||||||||||||    
T  26545905 gagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaa 26545847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 7799054 - 7799091
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  7799054 gaggaggagcacactcccaagtcccaagccaataccac 7799091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 13803566 - 13803501
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||||||||||| ||||||||||| | ||| |||||||||| ||| | | |||||||||    
T  13803566 gaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaa 13803501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 23140917 - 23140982
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||| ||||||| || ||||| |||| |||||||||||||||||  | |||||||||||    
T  23140917 gaaccagagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaaa 23140982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 23552707 - 23552772
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||| ||||||| || ||||| |||| |||||||||||||||||  | |||||||||||    
T  23552707 gaaccagagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaaa 23552772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 29197396 - 29197445
Alignment:
Q  144 aggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||||||||| |||||||| ||||||||| || |||||||||    
T  29197396 aggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaa 29197445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 41504955 - 41504992
Alignment:
Q  143 gaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  41504955 gaggaggagcatactcccaggtcccaagccaataccac 41504992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 26482173 - 26482114
Alignment:
Q  119 gaggagcatggaaccggagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    |||||| || ||||| ||||||||||| | ||||||||||| |||||||||||||| ||||    
T  26482173 gaggagaatcgaacctgagaccttgag-aggagcacactcctaggtcccaagccaacacca 26482114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 33569863 - 33569927
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaa-taccacgaaaccaaccca 192  Q
    ||||| ||||||| ||||||||||||||| ||| |||| ||||||| |||||| || ||||||||    
T  33569863 gaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaaccca 33569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 33839265 - 33839305
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaa 169  Q
    ||||| ||||||||||||| ||||||||||||| |||||||    
T  33839265 gaacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 94976 - 95040
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |  |||||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaa 95040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 9165200 - 9165264
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaa 9165264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 15786325 - 15786389
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||||| || | ||||||||||    
T  15786325 gaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaa 15786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 10526888 - 10526829
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||   |||||||||||    
T  10526888 gagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaa 10526829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 31794276 - 31794333
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaa 31794333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 36371534 - 36371477
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |  |||||||||    
T  36371534 agaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaa 36371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 33700778 - 33700842
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| |||||||||||||| | ||||||||||||||| |  |||||||||    
T  33700778 gaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaa 33700842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 52116786 - 52116850
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| |  |||||||||    
T  52116786 gaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 52116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 952581 - 952522
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaac 189  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  952581 aacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaac 952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 6122865 - 6122814
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  6122865 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 6122814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 8177187 - 8177238
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| || |||||||||| |||||||||||||| |||||||||||||||||    
T  8177187 gaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 8177238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 40257464 - 40257406
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||| |  |||||||||    
T  40257464 gagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaa 40257406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 44046162 - 44046204
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccac 44046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 9643820 - 9643865
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||    
T  9643820 gagaccttgaggatgaacacactcccagatcccaagccaataccac 9643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 51703838 - 51703785
Alignment:
Q  141 ttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||||| |||||||||||||| | ||||||||||||||| | |||||||||||    
T  51703838 ttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaa 51703785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 4566619 - 4566555
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||||||| ||| |  |||||||||    
T  4566619 gaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaa 4566555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 9570708 - 9570664
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||    
T  9570708 gagaccttgaggaagagcacactccaaggtctcaagccaacacca 9570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 19528332 - 19528396
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||||||||||| ||||||||||  || ||||||||||||||||| |  |||||||||    
T  19528332 gaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaa 19528396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 27223135 - 27223199
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| |||||||||| ||||||||||||||||| ||| ||| ||||||||  |||| |||||||    
T  27223135 gaacctgagaccttgaagaagagcacactcccagatcctaagtcaataccatcaaacaaacccaa 27223199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 31383818 - 31383854
Alignment:
Q  144 aggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31383818 aggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 2799933 - 2799882
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| |||||||||||||| || |||||| |||||||    
T  2799933 gaacctgagaccttgaggaggagcacactcccagatctcaagcctataccac 2799882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 4825041 - 4824978
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| |||||||||| || ||||||||||| |||||||||||||| ||||  | ||||||||||    
T  4825041 aacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaa 4824978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 16169983 - 16170034
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| || |||||||||| || ||||||||||||||||||| |||||||||    
T  16169983 gaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccac 16170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24047116 - 24047171
Alignment:
Q  138 accttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||| ||||||||||||| ||| ||||||||||||| || ||||||||||    
T  24047116 acctcgaggaggagcacactcccaagtctcaagccaataccatgagaccaacccaa 24047171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 37047054 - 37046992
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||| ||||||||||| | ||||||||||| |||||||||||||| ||||| | ||||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaa 37046992  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 52336779 - 52336830
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| |||| ||| |||| |||||||||||||| |||||||||||||||||    
T  52336779 gaacctgagatcttaaggaggagcacactcccagatcccaagccaataccac 52336830  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 9964508 - 9964462
Alignment:
Q  130 aaccggagaccttgaggaagagcacactcccaggtcccaagccaata 176  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||||    
T  9964508 aacctgagacattgaggaagagcacactcccagatcccaagtcaata 9964462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 11063620 - 11063562
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||||||||| || ||||||  ||||||||||||||||||||| | | |||||||||    
T  11063620 agaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaa 11063562  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 17745267 - 17745325
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||| ||||| |||||||| | ||||||||||||||||||||| |  |||||||||    
T  17745267 gagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaa 17745325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 37400339 - 37400281
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||| |||| |||||||||  |||||| |||||||||||||| | ||||||||||    
T  37400339 gagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaa 37400281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 41508896 - 41508838
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| |||||||||||||| |||||| ||| |||||| |  |||||||||    
T  41508896 gagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaa 41508838  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 43446028 - 43445970
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||||||||||| ||||||||||| ||| |||||||||| ||||  || |||||||||    
T  43446028 gagaccttgaggaggagcacactccaaggacccaagccaacaccatcaagccaacccaa 43445970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 21184399 - 21184444
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||| || | |||||||||| |||||||||||||||||||||    
T  21184399 gagaccttcagaaggagcacactcgcaggtcccaagccaataccac 21184444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 21268005 - 21268046
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaatac 177  Q
    |||||| ||||| ||||||||||||| |||||||||||||||    
T  21268005 agacctagaggaggagcacactcccaagtcccaagccaatac 21268046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 12370228 - 12370192
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagc 171  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  12370228 gagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 17297049 - 17297013
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagc 171  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  17297049 gagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 21547485 - 21547549
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| || |||| ||||| |||||| |||||| |||||||||||||||||| |  |||||||||    
T  21547485 gaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaa 21547549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 26232411 - 26232455
Alignment:
Q  149 gagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||||||||| || |||||||||||||| | ||||||||||    
T  26232411 gagcacactcccagatctcaagccaataccactagaccaacccaa 26232455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 31605859 - 31605903
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaatacca 179  Q
    ||||||||||||| ||||||||| | |||||||||||||| ||||    
T  31605859 gagaccttgaggaggagcacacttcaaggtcccaagccaacacca 31605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 35562789 - 35562745
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||| ||||| ||||||| || |||||||||||||||||||||    
T  35562789 agacctcgaggaggagcacattctcaggtcccaagccaataccac 35562745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 39012354 - 39012311
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||    
T  39012354 agaccttgag-aagagcacactccaaggtcccaagccaacaccac 39012311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 50901647 - 50901607
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaat 175  Q
    ||||||| ||||| ||||||||| |||||||||||||||||    
T  50901647 gagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 13051 - 13112
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacc 190  Q
    ||||| ||||||||||||| |||||||||||||| || |||||||||||||| || ||||||    
T  13051 gaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaacc 13112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 11599 - 11548
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||| ||||| |||||||||||||| |||||||||||||||||    
T  11599 gaacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 19967 - 20018
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  19967 gaacctgagaccttgaggaggagcatactcccaggttccaagccaataccac 20018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 2475 - 2540
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||||||||||| |||||||||||||| ||| || ||||||||||   |||||||||||    
T  2475 gaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaa 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 6924 - 6989
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    ||||| ||||| ||||||| ||||||||||||  |||||||||||||||||| |  ||||||||||    
T  6924 gaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaaa 6989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 25352 - 25403
Alignment:
Q  129 gaaccggagaccttgaggaagagcacactcccaggtcccaagccaataccac 180  Q
    ||||| ||||||||||| | ||||||||||||| ||| ||||||||||||||    
T  25352 gaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccac 25403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 7737 - 7795
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    |||||||| |||| |||||||||  |||||| |||||||||||||| | ||||||||||    
T  7737 gagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaa 7795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 1817 - 1759
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||||| |  ||||||||||    
T  1817 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaaa 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 12253 - 12195
Alignment:
Q  136 agaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaa 194  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||||| |  ||||||||||    
T  12253 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaaa 12195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 43343 - 43403
Alignment:
Q  135 gagaccttgaggaagagcacactcccaggtcccaagccaataccacgaaaccaacccaaaa 195  Q
    |||||||| || | || |||||||||| |||||||||||||||||| |  |||||||||||    
T  43343 gagaccttaagaaggaacacactcccaagtcccaagccaataccaccatgccaacccaaaa 43403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 38927 - 38971
Alignment:
Q  149 gagcacactcccaggtcccaagccaataccacgaaaccaacccaa 193  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  38927 gagcatactcctaggtcccaagccaataccaccagaccaacccaa 38971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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