View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11950_high_10 (Length: 370)
Name: NF11950_high_10
Description: NF11950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11950_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 48253743 - 48253392
Alignment:
| Q |
1 |
ccaaaataagataaataagcaaagacctcttaacacaaataagacgaaataaacaaattcagattaaataaatttaagcattaacatcaattggtgcttc |
100 |
Q |
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| T |
48253743 |
ccaaaataagataaataagcaaagacctcttaacacaaataagacgaaataaacaaattcagattaaataaatttaagcattaacatcaattggtgcttc |
48253644 |
T |
|
| Q |
101 |
tctctatatatacatgttgttaaaaatttatggaatagatcacgagtccgtgtccatatgtatgatttgttgttcaatagaaaacttaaacttattttga |
200 |
Q |
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| T |
48253643 |
tctatatatatacatgttgttaaaaatttattgaatagatcacgagtccgtgtccatatgcatgatttgttgttcaatagaaaatttaaacttattttga |
48253544 |
T |
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| Q |
201 |
cctaaaattttattctactttttgttttaggtagattcttagataaccttattcgagacgtgcatcgggtgttaaatgatgtagcatcgggtgttgtaca |
300 |
Q |
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| T |
48253543 |
cctaaaattttattctactttttgttttatgtagattcttagataaccttattcgagacgtgcatcggatgttaaatgatgatgcatcgggtgttgtaca |
48253444 |
T |
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| Q |
301 |
aacatttgaattattctttcaaaccacacactttgtgtttttggataggtgg |
352 |
Q |
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| T |
48253443 |
aacatttgaattattctttcaaaccacacactttgtgtgtttggataggtgg |
48253392 |
T |
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