View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11950_high_23 (Length: 221)
Name: NF11950_high_23
Description: NF11950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11950_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 35107853 - 35108032
Alignment:
| Q |
1 |
cagaccagttgagcacaagttgtgccaagtttatgctgcatacacttgggtgtacagcaagcaactatcacttggg-tttaca-acatccgaacactaaa |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |
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| T |
35107853 |
cagaccagttgagcacaagttgtgccaagtttatgctgcatacacttgggtgtacagcaagcaactatcacttggggtttacacacatctgaacactaaa |
35107952 |
T |
|
| Q |
99 |
cataaattgtattcggtagcattatactcatctacaataatagcaggtaaatacatttgagtgatcaaattagttcccat |
178 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
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| T |
35107953 |
cataaattgtattcggtagcattatactcatctacaataatagcaggtaaatatatctgagtgatcaaattagttcccat |
35108032 |
T |
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