View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11950_high_24 (Length: 220)
Name: NF11950_high_24
Description: NF11950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11950_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 44800805 - 44800996
Alignment:
| Q |
20 |
actagctcatatggaattaatgttagaaattgataagacaatgttacaatttgaaaactgaattgaaatgtcacaatttgaaaggagaagtgtgatacaa |
119 |
Q |
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| T |
44800805 |
actagctcatatggaattaatgttagaaattgatctgacattgttacaattcgaaaactgaactgaaatgttacaatttgaaaggagaagtatgatacag |
44800904 |
T |
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| Q |
120 |
ctatgcatggggtttagtaaacaataatgatatttgaacgctcaaaattttccaacactcatctaacgcctcattttctcttcatctctctc |
211 |
Q |
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| T |
44800905 |
ctatacaaggggtttaataaacaataatgatatttggacgctcaaaattttccaacactcatctaatgctttattttctctttatctctctc |
44800996 |
T |
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