View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11950_high_7 (Length: 482)

Name: NF11950_high_7
Description: NF11950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11950_high_7
NF11950_high_7
[»] chr6 (27 HSPs)
chr6 (227-478)||(16438950-16439203)
chr6 (259-470)||(33640878-33641090)
chr6 (258-473)||(28900434-28900654)
chr6 (269-473)||(24194764-24194969)
chr6 (260-479)||(2607191-2607411)
chr6 (342-472)||(31534711-31534832)
chr6 (112-172)||(1463641-1463701)
chr6 (112-172)||(6788170-6788230)
chr6 (386-470)||(21010521-21010604)
chr6 (387-437)||(15381218-15381268)
chr6 (113-171)||(16438777-16438835)
chr6 (112-172)||(24194483-24194544)
chr6 (113-172)||(12029046-12029105)
chr6 (43-98)||(16438671-16438726)
chr6 (43-101)||(2606860-2606918)
chr6 (122-172)||(33641267-33641317)
chr6 (113-170)||(2606966-2607023)
chr6 (113-166)||(30384694-30384746)
chr6 (113-166)||(31896156-31896208)
chr6 (113-166)||(34773904-34773956)
chr6 (112-172)||(3000310-3000370)
chr6 (112-172)||(8779552-8779611)
chr6 (235-314)||(31975403-31975484)
chr6 (113-151)||(31975643-31975681)
chr6 (45-98)||(30384797-30384850)
chr6 (48-101)||(31975729-31975782)
chr6 (112-172)||(10113750-10113810)
[»] chr7 (55 HSPs)
chr7 (272-471)||(43172361-43172561)
chr7 (235-478)||(16709794-16710040)
chr7 (235-478)||(17684030-17684276)
chr7 (354-473)||(23017362-23017481)
chr7 (342-473)||(21486502-21486634)
chr7 (203-441)||(5771750-5771990)
chr7 (347-473)||(42610883-42611009)
chr7 (404-478)||(31445773-31445847)
chr7 (113-166)||(8675850-8675903)
chr7 (113-166)||(21067898-21067951)
chr7 (113-166)||(21486213-21486266)
chr7 (113-166)||(29893490-29893543)
chr7 (386-470)||(6268857-6268941)
chr7 (113-172)||(42610688-42610747)
chr7 (113-163)||(12740888-12740938)
chr7 (43-101)||(33383086-33383144)
chr7 (113-166)||(37328425-37328478)
chr7 (121-166)||(41827854-41827899)
chr7 (113-166)||(48136862-48136915)
chr7 (112-172)||(14741496-14741556)
chr7 (112-172)||(21024136-21024196)
chr7 (417-469)||(33496988-33497040)
chr7 (118-166)||(44121567-44121615)
chr7 (386-437)||(1254158-1254209)
chr7 (113-164)||(7993675-7993726)
chr7 (43-98)||(39028499-39028554)
chr7 (43-98)||(40460452-40460507)
chr7 (381-467)||(4639513-4639599)
chr7 (47-101)||(12740786-12740840)
chr7 (3-41)||(12850706-12850744)
chr7 (381-467)||(14741827-14741913)
chr7 (120-162)||(29586039-29586081)
chr7 (43-101)||(42610582-42610640)
chr7 (113-166)||(510164-510216)
chr7 (114-151)||(23017064-23017101)
chr7 (113-166)||(23101809-23101861)
chr7 (113-166)||(28342829-28342881)
chr7 (113-166)||(29614430-29614482)
chr7 (113-166)||(39784625-39784677)
chr7 (113-166)||(47067228-47067280)
chr7 (118-162)||(30823161-30823205)
chr7 (122-166)||(32884289-32884333)
chr7 (113-156)||(3023452-3023495)
chr7 (43-98)||(18838822-18838877)
chr7 (113-156)||(18838928-18838971)
chr7 (43-98)||(32884183-32884238)
chr7 (43-98)||(33891972-33892027)
chr7 (411-478)||(42043744-42043810)
chr7 (114-172)||(4639844-4639902)
chr7 (47-101)||(8675747-8675801)
chr7 (227-314)||(21486399-21486488)
chr7 (43-101)||(37972612-37972670)
chr7 (43-97)||(43172119-43172173)
chr7 (113-166)||(37972511-37972564)
chr7 (118-166)||(39028610-39028657)
[»] chr2 (42 HSPs)
chr2 (204-479)||(18727239-18727517)
chr2 (227-467)||(38295332-38295576)
chr2 (235-479)||(31846764-31847011)
chr2 (227-479)||(40829882-40830136)
chr2 (227-478)||(34342492-34342746)
chr2 (341-479)||(9731310-9731447)
chr2 (386-469)||(32294265-32294348)
chr2 (386-465)||(24026205-24026280)
chr2 (386-470)||(37810497-37810581)
chr2 (112-170)||(2308687-2308745)
chr2 (113-163)||(38295698-38295748)
chr2 (113-178)||(40829707-40829772)
chr2 (112-170)||(18727620-18727678)
chr2 (409-469)||(3858307-3858367)
chr2 (43-101)||(34342203-34342261)
chr2 (113-166)||(6224206-6224259)
chr2 (113-170)||(31847191-31847248)
chr2 (113-166)||(33136136-33136189)
chr2 (417-469)||(15926489-15926541)
chr2 (112-172)||(18899899-18899959)
chr2 (43-101)||(15224195-15224253)
chr2 (112-166)||(18177790-18177843)
chr2 (381-467)||(18899542-18899628)
chr2 (113-166)||(7027423-7027475)
chr2 (113-166)||(43079010-43079063)
chr2 (420-469)||(43617911-43617960)
chr2 (113-166)||(43825360-43825412)
chr2 (121-161)||(13833053-13833093)
chr2 (43-98)||(379344-379399)
chr2 (43-98)||(6224310-6224365)
chr2 (131-166)||(25288701-25288736)
chr2 (113-156)||(28739933-28739976)
chr2 (43-98)||(28740027-28740082)
chr2 (113-156)||(28845105-28845148)
chr2 (386-437)||(30850794-30850845)
chr2 (112-151)||(35404311-35404350)
chr2 (138-172)||(12877782-12877816)
chr2 (420-478)||(2308152-2308212)
chr2 (113-166)||(3575361-3575413)
chr2 (113-182)||(24025919-24025988)
chr2 (417-469)||(32294444-32294495)
chr2 (144-172)||(34133515-34133543)
[»] chr3 (47 HSPs)
chr3 (227-479)||(43173151-43173406)
chr3 (227-478)||(33693514-33693768)
chr3 (203-479)||(21386085-21386363)
chr3 (258-473)||(4962313-4962529)
chr3 (235-479)||(49458627-49458869)
chr3 (318-478)||(7437147-7437306)
chr3 (113-170)||(33693327-33693384)
chr3 (113-171)||(4962703-4962761)
chr3 (113-170)||(16155235-16155292)
chr3 (113-170)||(49458429-49458486)
chr3 (120-168)||(7437546-7437594)
chr3 (114-184)||(7665663-7665732)
chr3 (113-166)||(20833415-20833468)
chr3 (113-166)||(50902938-50902991)
chr3 (112-172)||(8598729-8598789)
chr3 (409-469)||(21718344-21718404)
chr3 (394-470)||(30238175-30238251)
chr3 (113-164)||(26107847-26107898)
chr3 (43-101)||(7437649-7437707)
chr3 (43-101)||(43172892-43172950)
chr3 (113-166)||(52810876-52810929)
chr3 (118-166)||(48379673-48379721)
chr3 (112-172)||(49296186-49296246)
chr3 (43-98)||(48379562-48379617)
chr3 (43-98)||(52810770-52810825)
chr3 (112-154)||(53836032-53836074)
chr3 (381-467)||(53836334-53836420)
chr3 (113-166)||(34483728-34483780)
chr3 (113-166)||(40897649-40897701)
chr3 (113-166)||(54629369-54629422)
chr3 (417-469)||(25050034-25050086)
chr3 (118-166)||(44905484-44905532)
chr3 (43-98)||(17946640-17946695)
chr3 (112-151)||(21386476-21386515)
chr3 (113-172)||(22489455-22489514)
chr3 (43-98)||(37455259-37455314)
chr3 (43-98)||(44905588-44905643)
chr3 (43-98)||(50761833-50761888)
chr3 (227-314)||(16155397-16155486)
chr3 (43-97)||(21386566-21386620)
chr3 (120-166)||(31645891-31645936)
chr3 (113-151)||(39038608-39038646)
chr3 (222-300)||(7667152-7667232)
chr3 (386-419)||(9031707-9031740)
chr3 (121-166)||(23753019-23753063)
chr3 (386-430)||(29690982-29691026)
chr3 (140-172)||(49293910-49293942)
[»] chr1 (68 HSPs)
chr1 (227-478)||(32759699-32759953)
chr1 (272-473)||(3593532-3593734)
chr1 (269-478)||(42303978-42304189)
chr1 (230-478)||(49236595-49236845)
chr1 (243-479)||(47371166-47371405)
chr1 (280-479)||(49452657-49452856)
chr1 (272-473)||(35176870-35177073)
chr1 (227-473)||(25253776-25254028)
chr1 (356-479)||(28403575-28403700)
chr1 (392-479)||(19863274-19863361)
chr1 (354-428)||(48966153-48966227)
chr1 (386-470)||(46042299-46042383)
chr1 (386-460)||(226322-226396)
chr1 (113-170)||(47371547-47371604)
chr1 (113-172)||(28403916-28403975)
chr1 (113-172)||(42304470-42304529)
chr1 (113-171)||(48966462-48966520)
chr1 (118-187)||(32760054-32760123)
chr1 (43-101)||(48966568-48966626)
chr1 (113-182)||(49453015-49453089)
chr1 (43-99)||(3583635-3583691)
chr1 (112-172)||(4005158-4005218)
chr1 (112-172)||(9192115-9192175)
chr1 (118-166)||(38535772-38535820)
chr1 (118-166)||(38557990-38558038)
chr1 (112-172)||(51106983-51107043)
chr1 (112-170)||(3583528-3583586)
chr1 (114-172)||(25253586-25253644)
chr1 (411-469)||(52182484-52182542)
chr1 (113-166)||(45273086-45273139)
chr1 (113-166)||(46328505-46328558)
chr1 (113-166)||(49231526-49231579)
chr1 (112-172)||(8147408-8147468)
chr1 (112-172)||(26757706-26757766)
chr1 (112-172)||(41353512-41353572)
chr1 (386-470)||(42637749-42637834)
chr1 (43-98)||(46328399-46328454)
chr1 (381-467)||(1242920-1243006)
chr1 (43-101)||(5494825-5494883)
chr1 (112-154)||(11579088-11579130)
chr1 (43-101)||(28404023-28404081)
chr1 (381-467)||(41353817-41353903)
chr1 (43-101)||(49237043-49237101)
chr1 (43-101)||(49453138-49453196)
chr1 (113-166)||(5494724-5494777)
chr1 (113-166)||(6313095-6313147)
chr1 (113-166)||(15834661-15834713)
chr1 (113-166)||(25612611-25612663)
chr1 (113-166)||(29396061-29396113)
chr1 (113-166)||(51702114-51702166)
chr1 (112-172)||(1243276-1243336)
chr1 (43-98)||(8140963-8141018)
chr1 (43-98)||(15834764-15834819)
chr1 (43-98)||(25830979-25831034)
chr1 (113-156)||(29219640-29219683)
chr1 (43-94)||(38535880-38535931)
chr1 (43-94)||(38558098-38558149)
chr1 (43-98)||(45272980-45273035)
chr1 (381-427)||(5208933-5208979)
chr1 (381-467)||(11578739-11578825)
chr1 (112-170)||(15927390-15927448)
chr1 (120-166)||(28387082-28387127)
chr1 (409-469)||(49971490-49971547)
chr1 (113-166)||(25830876-25830928)
chr1 (113-166)||(48177069-48177121)
chr1 (112-172)||(5209338-5209398)
chr1 (122-166)||(9322144-9322187)
chr1 (115-151)||(35177201-35177237)
[»] chr4 (59 HSPs)
chr4 (282-473)||(33139100-33139293)
chr4 (243-479)||(24966089-24966328)
chr4 (229-461)||(32890127-32890361)
chr4 (227-470)||(29509667-29509913)
chr4 (356-479)||(46862542-46862666)
chr4 (356-467)||(50517495-50517606)
chr4 (227-426)||(46286959-46287162)
chr4 (410-479)||(26490873-26490942)
chr4 (113-172)||(24966492-24966551)
chr4 (113-172)||(50517264-50517323)
chr4 (356-437)||(35518148-35518229)
chr4 (386-437)||(25842622-25842673)
chr4 (43-101)||(32889861-32889919)
chr4 (113-166)||(29856036-29856089)
chr4 (386-469)||(40317279-40317362)
chr4 (386-469)||(40327353-40327436)
chr4 (113-172)||(46286780-46286839)
chr4 (203-330)||(53574052-53574182)
chr4 (43-97)||(29510150-29510204)
chr4 (113-166)||(5800484-5800537)
chr4 (408-469)||(24454025-24454086)
chr4 (113-166)||(28484416-28484469)
chr4 (113-166)||(30966972-30967024)
chr4 (113-166)||(37916309-37916362)
chr4 (113-162)||(49501165-49501214)
chr4 (113-162)||(49507230-49507279)
chr4 (113-166)||(49834462-49834515)
chr4 (409-469)||(871954-872014)
chr4 (112-172)||(8084279-8084339)
chr4 (112-172)||(29469233-29469293)
chr4 (50-101)||(871782-871833)
chr4 (113-172)||(26491096-26491155)
chr4 (386-437)||(26955688-26955739)
chr4 (43-98)||(30967075-30967130)
chr4 (112-154)||(42937402-42937444)
chr4 (396-437)||(4511593-4511634)
chr4 (113-166)||(5441922-5441974)
chr4 (112-161)||(8563342-8563391)
chr4 (112-157)||(23671362-23671407)
chr4 (113-150)||(29510061-29510098)
chr4 (113-166)||(37828059-37828111)
chr4 (113-166)||(48261598-48261650)
chr4 (402-470)||(21306005-21306073)
chr4 (43-98)||(23987611-23987666)
chr4 (43-98)||(32322480-32322535)
chr4 (43-98)||(49501265-49501320)
chr4 (43-98)||(49507330-49507385)
chr4 (381-467)||(29469539-29469625)
chr4 (138-172)||(41470299-41470333)
chr4 (389-467)||(42937220-42937298)
chr4 (138-172)||(54561324-54561358)
chr4 (144-182)||(55165636-55165674)
chr4 (113-166)||(23987716-23987768)
chr4 (113-166)||(27768584-27768636)
chr4 (113-166)||(29649634-29649686)
chr4 (133-166)||(32322607-32322640)
chr4 (257-314)||(46862694-46862751)
chr4 (121-166)||(51321384-51321428)
chr4 (112-160)||(26448701-26448748)
[»] chr8 (59 HSPs)
chr8 (296-473)||(12737686-12737864)
chr8 (258-479)||(27878208-27878430)
chr8 (258-479)||(27915152-27915374)
chr8 (258-479)||(27961571-27961793)
chr8 (258-479)||(28018389-28018611)
chr8 (227-461)||(42423454-42423690)
chr8 (227-463)||(12522018-12522257)
chr8 (205-426)||(6387748-6387974)
chr8 (318-479)||(27974564-27974725)
chr8 (318-479)||(28031833-28031994)
chr8 (386-479)||(44977141-44977234)
chr8 (370-478)||(24082593-24082701)
chr8 (356-479)||(27869534-27869659)
chr8 (356-479)||(8029450-8029571)
chr8 (113-196)||(8029787-8029870)
chr8 (356-478)||(3007408-3007529)
chr8 (418-479)||(6387498-6387559)
chr8 (113-170)||(27915551-27915608)
chr8 (113-170)||(27961970-27962027)
chr8 (418-479)||(41394306-41394367)
chr8 (122-182)||(24082283-24082343)
chr8 (386-453)||(33177492-33177559)
chr8 (43-101)||(8029918-8029976)
chr8 (113-170)||(42423261-42423318)
chr8 (43-98)||(9288226-9288281)
chr8 (113-166)||(16364226-16364279)
chr8 (113-166)||(26856625-26856678)
chr8 (113-170)||(27878607-27878664)
chr8 (113-170)||(28018788-28018845)
chr8 (113-162)||(31625828-31625877)
chr8 (408-469)||(35879824-35879885)
chr8 (408-469)||(37131184-37131245)
chr8 (386-437)||(4870784-4870836)
chr8 (113-161)||(12522415-12522463)
chr8 (409-469)||(17234872-17234932)
chr8 (112-172)||(19484285-19484345)
chr8 (37-101)||(43308237-43308301)
chr8 (113-156)||(43166314-43166357)
chr8 (43-98)||(43166408-43166463)
chr8 (381-467)||(19484589-19484675)
chr8 (112-170)||(6388094-6388156)
chr8 (409-462)||(7760953-7761006)
chr8 (405-469)||(24067259-24067321)
chr8 (118-166)||(37857409-37857456)
chr8 (230-314)||(8029599-8029685)
chr8 (43-98)||(10295071-10295126)
chr8 (43-98)||(18958459-18958514)
chr8 (43-98)||(19717606-19717661)
chr8 (112-159)||(26620329-26620376)
chr8 (43-98)||(31625722-31625777)
chr8 (131-166)||(32498079-32498114)
chr8 (119-166)||(39467147-39467193)
chr8 (43-98)||(39467250-39467305)
chr8 (113-156)||(44725429-44725472)
chr8 (120-166)||(18305605-18305650)
chr8 (231-314)||(41394193-41394278)
chr8 (113-166)||(14781761-14781813)
chr8 (121-166)||(43308137-43308181)
chr8 (118-166)||(7466846-7466893)
[»] scaffold0573 (1 HSPs)
scaffold0573 (258-473)||(9140-9360)
[»] scaffold0013 (2 HSPs)
scaffold0013 (235-478)||(89540-89787)
scaffold0013 (43-103)||(89245-89305)
[»] chr5 (28 HSPs)
chr5 (258-479)||(34218713-34218934)
chr5 (356-471)||(29716506-29716621)
chr5 (386-470)||(36195987-36196068)
chr5 (393-470)||(31913805-31913883)
chr5 (113-166)||(4240095-4240148)
chr5 (112-172)||(5651158-5651218)
chr5 (401-469)||(21490040-21490107)
chr5 (386-437)||(15286133-15286184)
chr5 (112-172)||(7125136-7125196)
chr5 (43-98)||(4549991-4550046)
chr5 (381-467)||(5650412-5650498)
chr5 (43-101)||(5651265-5651323)
chr5 (112-154)||(37798109-37798151)
chr5 (113-166)||(37014374-37014426)
chr5 (417-469)||(16497519-16497571)
chr5 (112-172)||(28623138-28623198)
chr5 (43-98)||(1460879-1460934)
chr5 (113-182)||(29758776-29758844)
chr5 (120-166)||(13926458-13926503)
chr5 (122-172)||(34218540-34218590)
chr5 (113-166)||(1151921-1151973)
chr5 (113-166)||(13999724-13999776)
chr5 (112-161)||(33892824-33892873)
chr5 (113-166)||(39852890-39852942)
chr5 (43-98)||(13926345-13926400)
chr5 (50-97)||(29716873-29716920)
chr5 (381-467)||(28622807-28622893)
chr5 (113-166)||(5949631-5949683)
[»] scaffold0118 (1 HSPs)
scaffold0118 (386-460)||(38243-38313)
[»] scaffold1128 (2 HSPs)
scaffold1128 (43-101)||(982-1040)
scaffold1128 (112-159)||(888-935)
[»] scaffold0042 (2 HSPs)
scaffold0042 (131-166)||(57693-57728)
scaffold0042 (43-98)||(57797-57852)
[»] scaffold0110 (2 HSPs)
scaffold0110 (47-101)||(39365-39419)
scaffold0110 (113-166)||(39264-39317)
[»] scaffold0543 (2 HSPs)
scaffold0543 (113-166)||(11044-11096)
scaffold0543 (43-98)||(10938-10993)
[»] scaffold1504 (1 HSPs)
scaffold1504 (43-98)||(1280-1335)
[»] scaffold0383 (1 HSPs)
scaffold0383 (113-166)||(16658-16711)
[»] scaffold0246 (1 HSPs)
scaffold0246 (112-161)||(1437-1486)
[»] scaffold0152 (2 HSPs)
scaffold0152 (113-166)||(20894-20947)
scaffold0152 (113-166)||(28854-28907)


Alignment Details
Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 16438950 - 16439203
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| ||||||||||| |||| |||||||||  ||||| | |||||||||| | ||||||||||||| ||||| |||| ||| | ||  | ||||||    
T  16438950 ttcctgaaatgaaacatttatttttctttcttctcggagttctcaaaccatgaacatgggagcacataccagttagggttgcgat-ctgacagtggaaat 16439048  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    |  |||| || |||||||||||||||||  | ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  16439049 ttagatttcgacgccggtgattgcgacgttggttagggttgcagtggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttt 16439148  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||| ||||    
T  16439149 tattaacaactttagaaacttgtgaaacttgcttttttggatggttttatggatg 16439203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 259 - 470
Target Start/End: Complemental strand, 33641090 - 33640878
Alignment:
Q  259 ctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggatt 357  Q
    ||||||||| |||||||||| | ||||||||||||| ||||  ||||  ||||| | || |||||||| |||| || || |||||||||||||||   ||    
T  33641090 ctgagttttcaaaccatgaacatgggagcacataccagttatggttgc-attccaacggtggaaattcagatttcgacgtcggtgattgcgacgcaagtt 33640992  T
Q  358 agggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc-t 456  Q
    |||||||| || |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |    
T  33640991 agggttgcggtggtggtgttagttgaccttttgaagaaattaactagtttattttttagatagttttattaacaactttaggaaattgtgaaacttcctt 33640892  T
Q  457 tttttggatggttt 470  Q
    ||||||||||||||    
T  33640891 tttttggatggttt 33640878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 258 - 473
Target Start/End: Complemental strand, 28900654 - 28900434
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacata----ccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgc 352  Q
    |||||||| | |||||||||| |||||||||||||    || ||||| ||||||||| ||| || ||||||||  ||| |  ||||| | |||||||| |    
T  28900654 tctgagttctcaaaccatgaacaggggagcacatatataccagttagggttgtgatttcgacggtggaaattcatatttcaacgccgtttattgcgacac 28900555  T
Q  353 ggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaact 452  Q
     | |||||||||  || || ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  28900554 cggttagggttgttgtggtagtgtttgttgtccttttgaagaaattaactagtttattttttagatagttttattaacaactttaggaacttgtgaaact 28900455  T
Q  453 tgcttttttggatggttttat 473  Q
    |||||||||||||||||||||    
T  28900454 tgcttttttggatggttttat 28900434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 269 - 473
Target Start/End: Original strand, 24194764 - 24194969
Alignment:
Q  269 aaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcag 367  Q
    |||||||||| | ||||||| ||||| ||||| |||| || ||||| || ||||||||  |||  | || |||||||| | || | | ||||| |||| |    
T  24194764 aaaccatgaacatgggagcatataccagttagggttgcgactccgacggtggaaattcatattttgacgtcggtgattacaacactggttaggattgcgg 24194863  T
Q  368 ttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    | |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||    
T  24194864 tggtggagtttgctgaccttttgaagaaattaactagtttattttttagatagttttaataacaactttaggaatttgtgaaactttcttttttggatgg 24194963  T
Q  468 ttttat 473  Q
    ||||||    
T  24194964 ttttat 24194969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 260 - 479
Target Start/End: Original strand, 2607191 - 2607411
Alignment:
Q  260 tgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggatta 358  Q
    |||||| | |||||||||| | | ||||||||||| |||||  ||| |||||||| || ||||||||  ||| || |  ||||||||||||||| | |||    
T  2607191 tgagttctcaaaccatgaacatgagagcacataccagttagcattgcgattccgacggtggaaattcatatttcgacatcggtgattgcgacgccggtta 2607290  T
Q  359 gggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttt 458  Q
    ||||||  || || ||||||| |||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||||  || |||| |||||||||||    
T  2607291 gggttgtggtggtagtgtttgttgaccttttgaaaaaattaactagtttcttttttagatagtttttttaacaactttagaaacttgtaaaacttgcttt 2607390  T
Q  459 tttggatggttttattgatga 479  Q
    |||||||| |||||| |||||    
T  2607391 tttggatgattttatggatga 2607411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 342 - 472
Target Start/End: Complemental strand, 31534832 - 31534711
Alignment:
Q  342 gattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaa 441  Q
    |||| |||||| |||||||||||| ||  ||||||||| |||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||        
T  31534832 gatttcgacgccgattagggttgcggtcatggtgtttgttgatcttttgaagaaattaagtagtttatttcttagatagttttattaacaacttta---- 31534737  T
Q  442 gttgtgaaacttgcttttttggatggtttta 472  Q
         ||||||||||||||||||||||||||    
T  31534736 -----gaaacttgcttttttggatggtttta 31534711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 1463701 - 1463641
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  1463701 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 1463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 6788170 - 6788230
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  6788170 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 6788230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 21010604 - 21010521
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||||||||||||||||||||  ||| ||||| || |||||||||||||  || |||||||||||  |||||||||||||||    
T  21010604 ttttgaagaaattaactagtttataattttgataggttaattaacaactttagaaacttgtgaaactt-attttttggatggttt 21010521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 15381268 - 15381218
Alignment:
Q  387 tttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  15381268 tttgaagaaattaacttgtttattttttggatagttttattaacaatttta 15381218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 16438777 - 16438835
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttta 171  Q
    ||||||||||||| | | ||||| |||||||||||||||||||||||||| ||||||||    
T  16438777 gtttgacgagtttaatcgagttagcactcggtaaactcgtgtaaactcgatcgagttta 16438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 24194483 - 24194544
Alignment:
Q  112 agtttgacgagt-ttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| || | |||||||||    
T  24194483 agtttgacgagtattgaccgagttaacactcggtaaactcgtgtaaattcaatcgagtttac 24194544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 12029046 - 12029105
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||||||||||  |||||||||    |||||||||||||||||||||||||||||    
T  12029046 gtttgacgagtttgacatagttaacacgtattaaactcgtgtaaactcgaccgagtttac 12029105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 16438671 - 16438726
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | |||||| ||||||||||| |||||||||    
T  16438671 gttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtac 16438726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 2606860 - 2606918
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||| |||||| ||||  ||||||| ||||||||||||||||| |||||    
T  2606860 gttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaa 2606918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 33641317 - 33641267
Alignment:
Q  122 gtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  33641317 gtttgaccgagttaacactcgataaactcgtgcaaactctaccgagtttac 33641267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 2606966 - 2607023
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||| |||||||||| |||||||||||  ||||||| | |||||||||||||||||    
T  2606966 gtttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttt 2607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 30384746 - 30384694
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  30384746 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 30384694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 31896156 - 31896208
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  31896156 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 31896208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 34773904 - 34773956
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  34773904 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 34773956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 3000310 - 3000370
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||| | |||||||||||  |||||||||||||| ||| | ||||||||    
T  3000310 agtttgacgagtttgatcgagttaacactcaataaactcgtgtaaaatcggctgagtttac 3000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 8779611 - 8779552
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||||||| |  | |||||||| ||||||||| ||||||||||    
T  8779611 agtttgacgagtttgaccaagttaactcgtgttaaactcg-gtaaactcgtccgagtttac 8779552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 31975484 - 31975403
Alignment:
Q  235 atgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    ||||||| ||| |||| |||||||||   |||| | |||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  31975484 atgaaacgtttttttttctttcttctctaagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccga 31975403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 31975681 - 31975643
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  31975681 gtttgacgagtttgaccgagttaagactcggtaaactcg 31975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 30384850 - 30384797
Alignment:
Q  45 tccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||| ||| | || |||||||||||| || |||||||||    
T  30384850 tccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtac 30384797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 31975782 - 31975729
Alignment:
Q  48 gcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||| |||||||| ||| | ||||||| ||||||| |||||||||||||||    
T  31975782 gcaaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaa 31975729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 10113810 - 10113750
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| |||| | |||| |||||||||||| || |||  |||||||||    
T  10113810 agtttgacgagtttgaccgagtttagactcagtaaactcgtgtgaaatcgggcgagtttac 10113750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 43172361 - 43172561
Alignment:
Q  272 ccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttg 370  Q
    ||||||||||||||||||||||| ||||| |||| ||||| || |  |||||||| |||| || ||||| |||||||||| | | |||||||||| || |    
T  43172361 ccatgaataggggagcacataccagttagggttgcgattctgacgatggaaattcagatttcgacgccgatgattgcgacaccggttagggttgcggtgg 43172460  T
Q  371 tggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43172461 tggtgtctgttgaccttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaacttgtgaaacttgcttttttggatggttt 43172560  T
Q  471 t 471  Q
    |    
T  43172561 t 43172561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 235 - 478
Target Start/End: Original strand, 16709794 - 16710040
Alignment:
Q  235 atgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattg 331  Q
    |||||||| ||||||| |||||||||  ||||| | |||||||||| ||||||||||||||| ||||| |||| |||||||| || |||||||| ||||     
T  16709794 atgaaacaattctttttctttcttctctgagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccgacggtggaaattcagattt 16709893  T
Q  332 cggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaaca 431  Q
    |  || ||||||||||||| |   |||||||||| || ||| |||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  16709894 caacgtcggtgattgcgacaccagttagggttgcggtggtgatgtttgttgaccttttgaagaaattaacttgtttattttttagatagtcttattaaca 16709993  T
Q  432 actttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  16709994 actttaggaacttgtgaaacttgcttttttggatggttttatggatg 16710040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 235 - 478
Target Start/End: Original strand, 17684030 - 17684276
Alignment:
Q  235 atgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattg 331  Q
    |||||||| ||||||| |||||||||  ||||| | |||||||||| ||||||||||||||| ||||| |||| |||||||| || |||||||| ||||     
T  17684030 atgaaacaattctttttctttcttctctgagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccgacggtggaaattcagattt 17684129  T
Q  332 cggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaaca 431  Q
    |  || ||||||||||||| |   |||||||||| || ||| |||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  17684130 caacgtcggtgattgcgacaccagttagggttgcggtggtgatgtttgttgaccttttgaagaaattaacttgtttattttttagatagtcttattaaca 17684229  T
Q  432 actttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  17684230 actttaggaacttgtgaaacttgcttttttggatggttttatggatg 17684276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 354 - 473
Target Start/End: Original strand, 23017362 - 23017481
Alignment:
Q  354 gattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaactt 453  Q
    |||||||||||| || |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||    
T  23017362 gattagggttgcggtggtggtgtttgttgaccttttgaaaaaattaactagtttattttttagatagttttattaacaactttagaaacttgtgaaactt 23017461  T
Q  454 gcttttttggatggttttat 473  Q
    ||||||||||||||||||||    
T  23017462 gcttttttggatggttttat 23017481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 342 - 473
Target Start/End: Original strand, 21486502 - 21486634
Alignment:
Q  342 gattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttatttt-ttagatagttttattaacaactttacga 440  Q
    |||| |||||| | ||||| ||||||| |||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  21486502 gatttcgacgccggttaggattgcagtggtggtgtttgttgaccttttgaaaaaattaactagtttatttttttagatagttttattaacaactttagga 21486601  T
Q  441 agttgtgaaacttgcttttttggatggttttat 473  Q
    | ||||||||||||||||||||||| |||||||    
T  21486602 acttgtgaaacttgcttttttggatagttttat 21486634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 203 - 441
Target Start/End: Complemental strand, 5771990 - 5771750
Alignment:
Q  203 cctttacagtaacaaattgctggcttcctgagatgaaacatttcttttactttctt--ctgagtttttaaaccatgaataggggagcacataccggttag 300  Q
    |||||||||||||| |||||| ||||||||| ||||||  || ||||| |||||||  ||||||| | |||  ||||| | | ||||||||||| |||||    
T  5771990 cctttacagtaacacattgcttgcttcctgaaatgaaaagttcctttttctttcttatctgagttctcaaaagatgaacatgagagcacataccagttag 5771891  T
Q  301 tgttgtgattccgat-ggggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaatta 399  Q
     |||  ||||||||  ||||||||||||| |||  | |||||||| | ||||| | |||| |||||  | ||||||||||||||| ||||||||||||||    
T  5771890 ggttacgattccgacaggggaaattctgactgcaacaccggtgatcgtgacgctggttagagttgcgatggtggtgtttgatgaccttttgaagaaatta 5771791  T
Q  400 actagtttattttttagatagttttattaacaactttacgaa 441  Q
    || |||||||||||| |||||||||||||| |||||||||||    
T  5771790 ac-agtttatttttttgatagttttattaaaaactttacgaa 5771750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 473
Target Start/End: Original strand, 42610883 - 42611009
Alignment:
Q  347 cgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgt 446  Q
    |||||| ||||||| || | || |||||||||| |||| ||||||| |||||||||||| || ||||||||| |||||||||||||||||| ||| ||||    
T  42610883 cgacgccgattaggattacggtggtggtgtttgttgaccttttgaaaaaattaactagtctagtttttagatggttttattaacaactttaggaacttgt 42610982  T
Q  447 gaaacttgcttttttggatggttttat 473  Q
    |||||||||||||||||||||||||||    
T  42610983 gaaacttgcttttttggatggttttat 42611009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 31445773 - 31445847
Alignment:
Q  404 gtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||    
T  31445773 gtttattttttagatagttttattaacaactttaggaacttgtgaaacttgcatttttggatggttttatggatg 31445847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 8675850 - 8675903
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  8675850 gtttgacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 8675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 21067898 - 21067951
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  21067898 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 21067951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 21486213 - 21486266
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  21486213 gtttgatgagtttgatcgagttaacactcggtaaactcgtgtaaactcgaccga 21486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 29893490 - 29893543
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29893490 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 29893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 6268857 - 6268941
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||| |||||||||||||| ||| ||  |||| ||||||||||||||||  || |||||||||||| ||||||| |||||||    
T  6268857 ttttgaaaaaattaactagtttgtttcttgaataggtttattaacaactttagaaacttgtgaaacttgtttttttgaatggttt 6268941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 42610688 - 42610747
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| ||||  ||||||||    
T  42610688 gtttgacgagtttgaccgagttaacactgggtaaactcgtgtaaattcgattgagtttac 42610747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 12740888 - 12740938
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgac 163  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  12740888 gtttgacgagtttgactaagttagcactcggtaaagtcgtgtaaactcgac 12740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 33383086 - 33383144
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| ||||||||||||    
T  33383086 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaa 33383144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 37328425 - 37328478
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  37328425 gtttaacgtgtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 37328478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 41827854 - 41827899
Alignment:
Q  121 agtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  41827854 agtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 41827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 48136915 - 48136862
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||||||||  |||||||||||| |||| ||||||||||||||||||    
T  48136915 gtttgacgagtttgactgagttaacactcgataaattcgtgtaaactcgaccga 48136862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 14741496 - 14741556
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  14741496 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 14741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 21024136 - 21024196
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||| | ||||||||||    
T  21024136 agtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaacttgtccgagtttac 21024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 33497040 - 33496988
Alignment:
Q  417 atagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||||| ||| |||||||||||||  ||||||||||||    
T  33497040 atagttttattaacaactttaggaacttgtgaaacttgccattttggatggtt 33496988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 44121615 - 44121567
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||    
T  44121615 acgagtttgactgagttaacacttggtaaactcgtgtaaactcgaccga 44121567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 1254209 - 1254158
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    ||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  1254209 ttttgaagaaactaactaatttattttttggataggtttattaacaacttta 1254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 7993675 - 7993726
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgacc 164  Q
    |||| |||||||||||  ||||||||||||||||||| ||||||||||||||    
T  7993675 gtttaacgagtttgactgagttaacactcggtaaactggtgtaaactcgacc 7993726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 39028499 - 39028554
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  39028499 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 39028554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 40460507 - 40460452
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||  |||||||||    
T  40460507 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtac 40460452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 4639599 - 4639513
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  4639599 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttgtgaaactttctttttgggatgg 4639513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 12740786 - 12740840
Alignment:
Q  47 cgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||| ||| | || ||||||||||||||| ||||||||||||    
T  12740786 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaa 12740840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 12850744 - 12850706
Alignment:
Q  3 aaatactatcttgttcagacaccaagttaccttcatcat 41  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12850744 aaatactatcttgttcaaacaccaagttaccttcatcat 12850706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 14741827 - 14741913
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  14741827 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 14741913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 29586039 - 29586081
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcga 162  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  29586039 gagtttgactgagttaacactcggtaaactcgtgtaaactcga 29586081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 42610582 - 42610640
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||| ||||||||| |||   |||||||||| ||||||||||||||||||||    
T  42610582 gttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaa 42610640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 510164 - 510216
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  510164 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 23017064 - 23017101
Alignment:
Q  114 tttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23017064 tttgacgagtttgaccgagttaacactcggtaaactcg 23017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 23101809 - 23101861
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  23101809 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 23101861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 28342829 - 28342881
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  28342829 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 28342881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 29614482 - 29614430
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  29614482 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 29614430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 39784625 - 39784677
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  39784625 gtttaacgagtttgacagagttaacactcggtaaactcgtgt-aactcgaccga 39784677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 47067228 - 47067280
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  47067228 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 47067280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 30823161 - 30823205
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcga 162  Q
    ||||||||||   ||||||||||||||||||||||||||||||||    
T  30823161 acgagtttgattgagttaacactcggtaaactcgtgtaaactcga 30823205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 32884289 - 32884333
Alignment:
Q  122 gtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||  |||||||||||||||||||||||||||||| |||||    
T  32884289 gtttgactgagttaacactcggtaaactcgtgtaaactcaaccga 32884333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 3023452 - 3023495
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  3023452 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 3023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 18838822 - 18838877
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  18838822 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 18838877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 18838928 - 18838971
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||    
T  18838928 gtttaacgagtttgactaagttaacattcggtaaactcgtgtaa 18838971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 32884183 - 32884238
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    |||||| |||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  32884183 gttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 32884238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 33892027 - 33891972
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||| ||||||||| |||||||||    
T  33892027 gttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtac 33891972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 478
Target Start/End: Original strand, 42043744 - 42043810
Alignment:
Q  411 ttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||| ||||||||||||||||||| ||  ||  |||||| ||||||||||||||||||||||| ||||    
T  42043744 ttttggatagttttattaacaactctagaaacatgtgaa-cttgcttttttggatggttttatggatg 42043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 4639902 - 4639844
Alignment:
Q  114 tttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||| ||||||||||| |||||||| ||| || |||  |||||||||    
T  4639902 tttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttac 4639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 8675747 - 8675801
Alignment:
Q  47 cgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||| ||| | || |||||||||| |||| ||||||||||||    
T  8675747 cgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaa 8675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 21486399 - 21486488
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    |||| |||||||||| |||||||| |||||||||   |||  | |||||||||| |||| |||||||||  ||||| |||||||||||||    
T  21486399 ttcccgagatgaaacgtttctttttctttcttctctaagtcctcaaaccatgaacagggaagcacatactagttagggttgtgattccga 21486488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 37972670 - 37972612
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| | |   || ||||||||||||||| ||||||||||||    
T  37972670 gttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaa 37972612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 43172119 - 43172173
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggta 97  Q
    ||||||||||||||||||||| |||   |||||||||||||||| | ||||||||    
T  43172119 gttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggta 43172173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 37972564 - 37972511
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||| ||||||  ||||| |||| |||||||||||||||||||||||||    
T  37972564 gtttaacgaatttgactgagttagcacttggtaaactcgtgtaaactcgaccga 37972511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 39028610 - 39028657
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  39028610 acgagtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 39028657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 8e-59; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 204 - 479
Target Start/End: Complemental strand, 18727517 - 18727239
Alignment:
Q  204 ctttacagtaacaaattgctggcttcctgagatgaaacatttcttttactttctt--ctgagtttttaaaccatgaataggggagcacataccggttagt 301  Q
    ||||||||||||  || ||| ||||||||| | ||||| ||| |||||||| |||  ||||||| |||||||||||| | | |||||||||||  ||||     
T  18727517 ctttacagtaacgcatagctagcttcctgaaacgaaacgttttttttacttccttatctgagttcttaaaccatgaacaagagagcacataccaattagg 18727418  T
Q  302 gttgtgattccgatgggg-aaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaa 400  Q
    |||| ||||||||||||| |||||  ||||||| | ||| |||||| ||||| | || ||||||| || ||||||||||| ||| |||||||||||||||    
T  18727417 gttgcgattccgatggggtaaatttcgattgcgacaccgatgattgtgacgctggttggggttgcggtggtggtgtttgacgaccttttgaagaaattaa 18727318  T
Q  401 ctagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||| |||||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  18727317 ctagttgattttttgaatagttttattaacaactttacgaacttgtgaaccttgcttttttggatggttttatagatga 18727239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 38295576 - 38295332
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga-tggggaaat 323  Q
    ||||||| ||||||| |||||||| |||||||||  ||||| | ||||||| || ||||||||||||||| ||||| |||| |||||||| || ||||||    
T  38295576 ttcctgaaatgaaacgtttctttttctttcttctctgagttctcaaaccataaacaggggagcacataccagttagggttgcgattccgactgtggaaat 38295477  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgac-tttttgaagaaattaactagtttattttttagatagtt 422  Q
    ||  ||| ||  | ||||||||| ||||| | |||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  38295476 tcatatttcgatgtcggtgattgtgacgccggttagggttgcggtggtggtgtttgctgacctttttgaagaaattaactagtttattttttagatagtt 38295377  T
Q  423 ttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||||| |||||||| ||| ||||||||||| |||||||||||||    
T  38295376 ttattagcaactttaggaatttgtgaaactttcttttttggatgg 38295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 235 - 479
Target Start/End: Complemental strand, 31847011 - 31846764
Alignment:
Q  235 atgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattg 331  Q
    ||||||| |||||||| |||| ||||  ||||| | ||||||| || ||||||||||||||| ||||| |||| |||||||| |  |||||||  ||||     
T  31847011 atgaaacgtttctttttcttttttctctgagttctcaaaccataaacaggggagcacataccagttagggttgcgattccgacgatggaaatttagattt 31846912  T
Q  332 cggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaaca 431  Q
    |  |||| |||||||||||||   |||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31846911 caacgccagtgattgcgacgcttgttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattaaca 31846812  T
Q  432 actttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||| ||| |||  |||||||||||||| ||||||||||| |||||    
T  31846811 actttaggaacttgcaaaacttgcttttttagatggttttatggatga 31846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 227 - 479
Target Start/End: Original strand, 40829882 - 40830136
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||||||||||| |||||||| |||||||||   |||| | |||||||||| |||||||||  |||| ||||| |||| ||||  || || ||||||    
T  40829882 ttcctgagatgaaacgtttctttttctttcttctctaagttctcaaaccatgaacaggggagcatgtaccagttagggttgcgattttgacggtggaaat 40829981  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || |||| |  ||| | |||||||||||||| ||||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||||| ||||    
T  40829982 tcagatttccacgctgatgattgcgacgcgg-ttagggttgcagtggtagtgtttgttgaccttttgaagaaattaactagtttatgttttagatggttt 40830080  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||||||| || ||| |||||||||||||||||||||||| |||||| |||||    
T  40830081 tattaacaactataggaacttgtgaaacttgcttttttggatgattttatggatga 40830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 34342492 - 34342746
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| ||||||| |||||||| |||||||||  ||||| | |||||||||||| ||||||||||||| ||||| |||| |||||| | || ||||||    
T  34342492 ttcctgaaatgaaacgtttctttttctttcttctccgagttctcaaaccatgaataagggagcacataccagttagggttgcgattccaacggtggaaat 34342591  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    ||  ||| || ||| ||| |||||||||  | |||||||||  || |||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  34342592 tcatatttcgacgctggtaattgcgacgtcggttagggttgtggtggtggtgtttgttgaccttttcaagaaattaactagtttattttttagatagttt 34342691  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||||||||||   || |||||||||||||| |||||||| ||||||| ||||    
T  34342692 tattaacaactttgaaaacttgtgaaacttgctattttggatagttttatagatg 34342746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 341 - 479
Target Start/End: Original strand, 9731310 - 9731447
Alignment:
Q  341 tgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacga 440  Q
    |||||||||||| |||||||||||| || |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |    
T  9731310 tgattgcgacgccgattagggttgcggtggtggtgtttgttgaccttttgaagaaattaattagtttattttttagatagttttattaacaactttagta 9731409  T
Q  441 agttgtgaaacttgcttttttggatggttttattgatga 479  Q
    | |||||||||||| |||||||||||||||||| |||||    
T  9731410 atttgtgaaacttg-ttttttggatggttttatggatga 9731447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 32294265 - 32294348
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  32294265 ttttgaagaaattaactagtttattttttggatagttttattaacaactttaggaacttgtgaaacttgcttttttggatggtt 32294348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 24026205 - 24026280
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggat 465  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    || ||||||||||||||| ||||||    
T  24026205 ttttgaagaaattaactagtttattttttggatagttttattaacaacttt----agatgtgaaacttgctttattggat 24026280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 37810581 - 37810497
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||  |||||||||| || ||| |||||||||    
T  37810581 ttttgaagaaattaactagtttattttttggataggtttattaacaactttatcaacatgtgaaacttactctttcggatggttt 37810497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 2308745 - 2308687
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  2308745 agtttgacaagtttgaccaagttaacactcggtaaaatcgtgtaaactcgatcgagttt 2308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 38295748 - 38295698
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgac 163  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38295748 gtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgac 38295698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 40829707 - 40829772
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaa 178  Q
    ||||||||| ||||||| |||||||||||  ||||||| |||||||||||||||||||||||||||    
T  40829707 gtttgacgaatttgaccgagttaacactcaataaactcatgtaaactcgaccgagtttacatctaa 40829772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 18727678 - 18727620
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||    
T  18727678 agtttgacgagtttcaccgagttaacattcgataaactcgtgtaaactcgaccgagttt 18727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 3858367 - 3858307
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||| ||||||||||||||||||| || ||| ||||||||||||| |||||||||||||    
T  3858367 ttttttggatagttttattaacaactataggaacttgtgaaacttgcctttttggatggtt 3858307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 34342203 - 34342261
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| |||   |||||||||||||||||| ||||||||||||    
T  34342203 gttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaa 34342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 6224259 - 6224206
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||| |||||||||||||||    
T  6224259 gtttaacgagtttgactgagttaacactcggtaaactcatgtaaactcgaccga 6224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 31847248 - 31847191
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||| |||| | ||||||||||||||||||||||||||  ||||||||||    
T  31847248 gtttgacgagttcgaccgaattaacactcggtaaactcgtgtaaacatgaccgagttt 31847191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 33136136 - 33136189
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  33136136 gtttaacgaatttgactaagttaacactcggtaaacttgtgtaaactcgaccga 33136189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 15926489 - 15926541
Alignment:
Q  417 atagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||||| |||  |||||||||||| |||||||||||||    
T  15926489 atagttttattaacaactttaggaacatgtgaaacttgcctttttggatggtt 15926541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 18899959 - 18899899
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  18899959 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 18899899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 15224195 - 15224253
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||||||||||  || | |||||||| | ||||||||||||||||||||    
T  15224195 gttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaa 15224253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 18177790 - 18177843
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  18177790 agtttaacgagtttgacagagttaacactcggtaaactcgtgt-aactcgaccga 18177843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 18899628 - 18899542
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  18899628 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 18899542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 7027423 - 7027475
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  7027423 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 7027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 43079010 - 43079063
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||   |||||||||||| |||||||||||||||||||||||    
T  43079010 gtttaacgagtttgattgagttaacactcgataaactcgtgtaaactcgaccga 43079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 43617911 - 43617960
Alignment:
Q  420 gttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||  || ||||||||||||| |||||||||||||    
T  43617911 gttttattaacaactttagaaacttgtgaaacttgcctttttggatggtt 43617960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 43825360 - 43825412
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  43825360 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 43825412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 13833093 - 13833053
Alignment:
Q  121 agtttgaccaagttaacactcggtaaactcgtgtaaactcg 161  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  13833093 agtttgactgagttaacactcggtaaactcgtgtaaactcg 13833053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 379344 - 379399
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||||  || ||||||| ||||||| |||||||||    
T  379344 gttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtac 379399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 6224365 - 6224310
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||| ||||||||||| |||||||||    
T  6224365 gttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtac 6224310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 25288701 - 25288736
Alignment:
Q  131 agttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||| |||||||||||||||||||||||    
T  25288701 agttaacactcgataaactcgtgtaaactcgaccga 25288736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 28739976 - 28739933
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  28739976 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 28740082 - 28740027
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || |||||||||||| || |||||||||    
T  28740082 gttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtac 28740027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 28845105 - 28845148
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  28845105 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 30850794 - 30850845
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    ||||||| ||||||||| | ||||||| | ||||||||||||||||||||||    
T  30850794 ttttgaataaattaacttggttattttatggatagttttattaacaacttta 30850845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 35404350 - 35404311
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35404350 agtttgacgagtttgaccgagttaacactcgataaactcg 35404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 12877782 - 12877816
Alignment:
Q  138 actcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||||| ||||||||||    
T  12877782 actcggtaaactcgtgtaaactcgtccgagtttac 12877816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 2308212 - 2308152
Alignment:
Q  420 gttttattaacaactttacgaagttgtgaaacttgctttt--ttggatggttttattgatg 478  Q
    |||||||||||||||||| ||| |||||||||||| ||||  ||||||| |||||| ||||    
T  2308212 gttttattaacaactttaggaacttgtgaaacttgttttttattggatgtttttatggatg 2308152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 3575361 - 3575413
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||| || |||||||||||    
T  3575361 gtttaacgagtttgactgagttaacactcggtaaactcgcgt-aactcgaccga 3575413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 24025919 - 24025988
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaa 182  Q
    ||||||||| || |||  |||||||||  | ||||||||||| |||||||| |||||||||| |||||||    
T  24025919 gtttgacgaattggactgagttaacacgtgttaaactcgtgtgaactcgactgagtttacatttaaaaaa 24025988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 32294495 - 32294444
Alignment:
Q  417 atagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||||||||||||| |||| ||| |||||||||||| |||||| |||||||    
T  32294495 atagttttattaacaa-tttaggaacttgtgaaacttgatttttttgatggtt 32294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 34133543 - 34133515
Alignment:
Q  144 taaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||||||||||    
T  34133543 taaactcgtgtaaactcgaccgagtttac 34133515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 227 - 479
Target Start/End: Original strand, 43173151 - 43173406
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggg-gaaat 323  Q
    ||||||| ||||||| |||||||| |||||||||   |||||| |||||||||||||||||||||||||| ||||| |||| |||||||| |   ||||     
T  43173151 ttcctgaaatgaaacgtttctttttctttcttctctaagttttcaaaccatgaataggggagcacataccagttagagttgcgattccgacgatagaaac 43173250  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    ||  ||| || ||| ||||||||||| || | |||||||||| |  | |||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  43173251 tcatatttcgacgctggtgattgcgatgccggttagggttgcggcggcggtgtttgttgaccttttgaagaaattaactaatttattttttagatagttt 43173350  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||| |||||    
T  43173351 tattaacaactttaggaactggtgaaacttgcttttttggatggttttatggatga 43173406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 33693514 - 33693768
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggggaaa-t 323  Q
    ||||||| |||| || |||||||| |||||||||  || || | |||||||||| |||| |||||||||| ||||  ||||| ||| ||| ||||||| |    
T  33693514 ttcctgaaatgagacgtttctttttctttcttctctgaattctcaaaccatgaacagggaagcacataccagttatggttgtaatttcgacggggaaaat 33693613  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || |||| |   ||| ||||||||||||| || || ||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  33693614 tcagatttcaatgcctgtgattgcgacgccgactacggttgcagtggtggtgtttgttgaccttttgaagaaattaagtagtttattttttagatagttt 33693713  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  33693714 tattaacaactttaggaacttgtgaaacttgcttttttggatggttttatggatg 33693768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 203 - 479
Target Start/End: Complemental strand, 21386363 - 21386085
Alignment:
Q  203 cctttacagtaacaaattgctggcttcctgagatgaaacatttcttttactttctt--ctgagtttttaaaccatgaataggggagcacataccggttag 300  Q
    ||||||||||||||||||||| ||||||| | ||||||  |||||||| |||| ||  ||||||| ||||| ||| || | | ||||||||||| |||||    
T  21386363 cctttacagtaacaaattgctagcttcctaa-atgaaatgtttctttttcttttttatctgagttcttaaaacataaacatgagagcacataccagttag 21386265  T
Q  301 tgttgtgattccgatgggg-aaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaatta 399  Q
     |||  |||||||| |||| |||||| ||||||| || ||||| |   || |  | |||||||||| || ||||||||||||||| ||||||||||||||    
T  21386264 ggttacgattccgacgggggaaattccgattgcgacgtcggtgttaaggatgttggttagggttgcggtggtggtgtttgatgaccttttgaagaaatta 21386165  T
Q  400 actagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  21386164 actagtttattttttggacagttttattaacaactttacgaacttgtgaaacttgctttttcggatggttttatggatga 21386085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 258 - 473
Target Start/End: Complemental strand, 4962529 - 4962313
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||| ||||||||||||| | ||||| | || ||||| || || ||||||||   || || |  || |||||||||||  | |    
T  4962529 tctgagttctcaaaccatgaacaggggagcacatatcagttagggctgcgattcagacggtggaaattcatgtttcgacatcgatgattgcgacgttggt 4962430  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    ||||||||| || |||||||||| | || |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  4962429 tagggttgcggtggtggtgtttgttaaccttttgaagaaattaactagtttattttttagatagttttattgacaactttaggaacttgtgaaacttgct 4962330  T
Q  457 tttttggatggttttat 473  Q
    |||||||||||||||||    
T  4962329 tttttggatggttttat 4962313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 235 - 479
Target Start/End: Original strand, 49458627 - 49458869
Alignment:
Q  235 atgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattg 331  Q
    |||||||||||||||| ||||| |||  ||||| | |||||||||| | || |||||||||| ||||| ||||     |||| || ||||||||  ||      
T  49458627 atgaaacatttctttttctttcctctctgagttctcaaaccatgaaaatggaagcacataccagttagggttg-----ccgacggtggaaattcatatat 49458721  T
Q  332 cggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaaca 431  Q
    || || ||||||||||| ||| | |||||||||  || || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49458722 cgacgtcggtgattgcgtcgccggttagggttgtggtggtagtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattaaca 49458821  T
Q  432 actttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||    
T  49458822 actttaggaacttgtgaaacttgattttttggatggttttatggatga 49458869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 478
Target Start/End: Complemental strand, 7437306 - 7437147
Alignment:
Q  318 ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttaga 417  Q
    |||||||| |||| || || | ||||||||||||| | |||| ||||| || |||||||||| | ||||||||||| |||||||||||||||||||||||    
T  7437306 ggaaattcagatttcgacgtcagtgattgcgacgctggttagagttgcggtggtggtgtttgtttactttttgaagtaattaactagtttattttttaga 7437207  T
Q  418 tagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||    
T  7437206 tagttttattaacaactttaggaacttgttaaacttg-ttttttggatggttttatggatg 7437147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 33693327 - 33693384
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33693327 gtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 33693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 4962761 - 4962703
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttta 171  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4962761 gtttgacgagtttgaccgagttaacactcggtaaactcatgtaaactcgaccgagttta 4962703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 16155235 - 16155292
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  16155235 gtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaactcgaccgagttt 16155292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 49458429 - 49458486
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  49458429 gtttgacgagtttgaccaaattaacactcagtaaactcgtgtaaactcgaccgagttt 49458486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 7437594 - 7437546
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagt 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7437594 gagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagt 7437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 7665663 - 7665732
Alignment:
Q  114 tttgacgagtttgacca-agttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaaga 184  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  7665663 tttgacgagtttgactagagttaac--tcggtaaactcgtgtaaactcgaccgagtttacgtctaaaaaaga 7665732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 20833415 - 20833468
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20833415 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 20833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 50902991 - 50902938
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  50902991 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 50902938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 8598729 - 8598789
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  8598729 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 8598789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 21718404 - 21718344
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||| |||||||||||||||| |||| ||| ||||||||||||| |||||||||||||    
T  21718404 ttttttatatagttttattaacaattttaagaacttgtgaaacttgcctttttggatggtt 21718344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 30238251 - 30238175
Alignment:
Q  394 aaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||||||||||||||||| ||||| |||||||||||||||   ||  |||||||||||  ||||||||||||||    
T  30238251 aaattaactagtttattttttggataggtttattaacaacttttgaaacctgtgaaacttgtatttttggatggttt 30238175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 26107847 - 26107898
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgacc 164  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  26107847 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgacc 26107898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 7437707 - 7437649
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||||||||||||    
T  7437707 gttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaa 7437649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 43172892 - 43172950
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||| |||||| |||| ||||||| |||||||| |||||||||||||||    
T  43172892 gttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaa 43172950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 52810876 - 52810929
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  52810876 gtttaacgagtttgactgagttaacactcggtaaacttgtgtaaactcgaccga 52810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 48379673 - 48379721
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  48379673 acgagtttgactgagttaacactcggtaaactcgtgtaaacttgaccga 48379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 49296186 - 49296246
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  49296186 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 49296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 48379562 - 48379617
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  48379562 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 48379617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 52810770 - 52810825
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  52810770 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 52810825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 53836032 - 53836074
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgt 154  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  53836032 agtttgacgagtttgaccgagttaacactcagtaaactcgtgt 53836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 53836334 - 53836420
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  53836334 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttgtgaaacttcctttttgggatgg 53836420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 34483780 - 34483728
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  34483780 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 34483728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 40897649 - 40897701
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  40897649 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 40897701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 54629369 - 54629422
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  54629369 gtttaacgagtttgattcagttaacactcagtaaactcgtgtaaactcgaccga 54629422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 25050034 - 25050086
Alignment:
Q  417 atagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||| ||||  ||| ||||||||||||| |||||||||||||    
T  25050034 atagttttattaacacctttgggaacttgtgaaacttgcatttttggatggtt 25050086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 44905532 - 44905484
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||  |||||||||||||||||||||| |||||||||||||    
T  44905532 acgaatttgactgagttaacactcggtaaactcgtataaactcgaccga 44905484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 17946640 - 17946695
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||| ||||||||||| |||||||||    
T  17946640 gttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtac 17946695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 21386515 - 21386476
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  21386515 agtttgacgagtttgaccgagttgacactcggtaaactcg 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 22489514 - 22489455
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||| |||||||||||| ||||||||||| |||||||||| | || |||| |||||||||    
T  22489514 gtttaacgagtttgaccgagttaacactcagtaaactcgtatgaagtcgagcgagtttac 22489455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 37455259 - 37455314
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || |||||||| |||||| |||||||||    
T  37455259 gttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtac 37455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 44905643 - 44905588
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || |||||||||||||||  ||||||||    
T  44905643 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtac 44905588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 50761888 - 50761833
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    |||| |||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  50761888 gttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 50761833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 16155397 - 16155486
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    ||||||| ||||||  |||||||| |||||||||  ||||| | ||||||| || ||||||||||||||| ||||| ||||  |||||||    
T  16155397 ttcctgaaatgaaatgtttctttttctttcttctctgagttctcaaaccatcaacaggggagcacataccagttagggttgcaattccga 16155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 21386620 - 21386566
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggta 97  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||| | ||||||||    
T  21386620 gttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggta 21386566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 31645936 - 31645891
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||    
T  31645936 gagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 31645891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 39038608 - 39038646
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  39038608 gtttaacgagtttgactaagttaacactcggtaaactcg 39038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 7667152 - 7667232
Alignment:
Q  222 ctggcttcctgagatgaaacatttcttttactttct--tctgagtttttaaaccatgaataggggagcacataccggttag 300  Q
    |||||||||||| || || |||||||||| ||||||  ||| |||| | |||||||||| ||| ||||||||||| |||||    
T  7667152 ctggcttcctgaaattaagcatttctttttctttcttctcttagttctcaaaccatgaacaggagagcacataccagttag 7667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 9031740 - 9031707
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagata 419  Q
    ||||||||||||||||||||||||||||| ||||    
T  9031740 ttttgaagaaattaactagtttattttttggata 9031707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 23753063 - 23753019
Alignment:
Q  121 agtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||    
T  23753063 agtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 23753019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 29690982 - 29691026
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaac 430  Q
    ||||||| ||||||||| ||||||||||| ||||| |||||||||    
T  29690982 ttttgaaaaaattaacttgtttattttttggataggtttattaac 29691026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 49293910 - 49293942
Alignment:
Q  140 tcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||| ||||||||||    
T  49293910 tcggtaaactcgtgtaaactcgtccgagtttac 49293942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 227 - 478
Target Start/End: Complemental strand, 32759953 - 32759699
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggggaaa-t 323  Q
    ||||||| |||||||||||||||| |||||||||  ||||| | |||||||||| | ||||||||||| | ||||| |||| |||||||| || |||| |    
T  32759953 ttcctgaaatgaaacatttctttttctttcttctctgagttctcaaaccatgaacaagggagcacatatcagttagggttgcgattccgacggtgaaaat 32759854  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || |||| || ||||||||||||||||   | |||||||||| |  |||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  32759853 tcagatttcgacgccggtgattgcgacatcggttagggttgcgggggtggtgtttgttgaccatttgaagaaattaactagtttattttttagatagttt 32759754  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    ||||||||| |||  ||| |||| ||||||| |||||||||||||||||| ||||    
T  32759753 tattaacaattttttgaacttgtaaaacttggttttttggatggttttatggatg 32759699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 272 - 473
Target Start/End: Original strand, 3593532 - 3593734
Alignment:
Q  272 ccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttg 370  Q
    ||||||||||||||||||||| | |||||||||||||||| ||  | |||||||| |||| || ||||  |||||||||| | | |||||||||| ||      
T  3593532 ccatgaataggggagcacatatcagttagtgttgtgattctgacagtggaaattcagatttcgacgccaatgattgcgacaccggttagggttgcggtgt 3593631  T
Q  371 tggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  3593632 tggtgtttgtttaccttttgaagaaattaacaagtttattttttagatagttttattaacaactttacggacttgtgaaacttacttttttggatggttt 3593731  T
Q  471 tat 473  Q
    |||    
T  3593732 tat 3593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 269 - 478
Target Start/End: Complemental strand, 42304189 - 42303978
Alignment:
Q  269 aaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcag 367  Q
    |||||||||| |||||||||||||||  |||| |||||||||| || || ||||||||  ||| |  |||||||||||| ||| | | |||||||||  |    
T  42304189 aaaccatgaacaggggagcacataccatttagggttgtgattcagacggtggaaattcatatttcaacgccggtgattgtgacactggttagggttgttg 42304090  T
Q  368 ttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc-ttttttggatg 466  Q
    | |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||| | |||||||||||    
T  42304089 tggtggtgtttgttgacgttttgaagaaattaactactttattttttagatagttttattaataactttaggaacttgtgaaactttctttttttggatg 42303990  T
Q  467 gttttattgatg 478  Q
    ||||||| ||||    
T  42303989 gttttatggatg 42303978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 230 - 478
Target Start/End: Complemental strand, 49236845 - 49236595
Alignment:
Q  230 ctgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggggaaa-ttct 326  Q
    |||||||| |||||| ||||| |||||||||   |||| | |||||||||| | |||||||||||||  |||| |||| |||| ||| || |||| |||     
T  49236845 ctgagatggaacatt-ctttttctttcttctctaagttctcaaaccatgaacatgggagcacataccaattagggttgcgatttcgacggtgaaaattca 49236747  T
Q  327 gattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttat 426  Q
    |||| || || || ||||||| |||| | ||| |||||| || ||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  49236746 gatttcgacgtcgatgattgcaacgctggttatggttgctgtggtggtatttgttgaccttttaaagaaattaactagtttattttttagatagttttat 49236647  T
Q  427 taacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    ||||||||||| ||| || |||||||| ||||||||||||||||||| ||||    
T  49236646 taacaactttaggaacttatgaaactttcttttttggatggttttatggatg 49236595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 243 - 479
Target Start/End: Complemental strand, 47371405 - 47371166
Alignment:
Q  243 tttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccg 339  Q
    |||||||| |||||||||  ||||| | |||||| ||| | |||||||||||||  |||| ||||  ||| ||| || ||||| |  |||| || |||||    
T  47371405 tttctttttctttcttctctgagttctcaaaccacgaacatgggagcacataccaattagggttgcaatttcgacggtggaaacttagatttcgacgccg 47371306  T
Q  340 gtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacg 439  Q
    |||||||| | || | |||||||||  |  |||||||| | |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| |    
T  47371305 gtgattgcaatgccggttagggttgtggcggtggtgttcgttgaccttttgaagaaattaactagtttgttttttagattgttttattaacaactttaag 47371206  T
Q  440 aagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    || ||||||||||||||||||||||||||||||| |||||    
T  47371205 aacttgtgaaacttgcttttttggatggttttatggatga 47371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 280 - 479
Target Start/End: Complemental strand, 49452856 - 49452657
Alignment:
Q  280 aggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgttt 378  Q
    ||||||||| ||||| ||||| |||| |||||| | || ||||| ||  ||| || ||||| | |||||||||| | |||||||||| || || ||||||    
T  49452856 aggggagcatataccagttagggttgcgattccaacggtggaaagtcatatttcgacgccgtttattgcgacgccggttagggttgcggtggtagtgttt 49452757  T
Q  379 gatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    | || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||||||||||||| ||||    
T  49452756 gttgtcgttttgaagaaattaactagtttattttttagatagttttattaacaaatttaggaacttgtgaaacttg-ttttttggatggttttatggatg 49452658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 272 - 473
Target Start/End: Complemental strand, 35177073 - 35176870
Alignment:
Q  272 ccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttg 370  Q
    ||||||| || ||||| |||||| || || |||| |||||||| || |||||||| |||| || || ||||||||||||||| | |||||||| |  | |    
T  35177073 ccatgaacagaggagcgcataccagtgagggttgcgattccgacggtggaaattcagatttcgacgtcggtgattgcgacgccggttagggttacgttgg 35176974  T
Q  371 tggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgctt-ttttggatggtt 469  Q
    ||||||||| |||| ||||||||||||| |||| |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||    
T  35176973 tggtgtttgttgaccttttgaagaaattcactaatttaatttttagatagttttattaacaacattatgaacttgtgaaacttgctttttttggatggtt 35176874  T
Q  470 ttat 473  Q
    ||||    
T  35176873 ttat 35176870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 473
Target Start/End: Original strand, 25253776 - 25254028
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| || |||| |||||||| ||||||| |  ||||| | ||||| |||||| ||||| ||||||||||||| |||| || ||| | || ||||||    
T  25253776 ttcctgaaataaaacgtttctttttctttctttttcgagttctcaaaccttgaataagggagtacataccggttagggttgcgaatccaacggtggaaat 25253875  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagt---ttattttttagatag 420  Q
    ||  ||| || |||||||||||||||||   | ||||||||| || |||||||||| |||| ||||||||||||||||||||   |||||||||||||||    
T  25253876 tcatatttcgacgccggtgattgcgacgtcaaatagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttattattttttagatag 25253975  T
Q  421 ttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttat 473  Q
    ||||||||||||||||   || ||| |||||||| | |||| |||||||||||    
T  25253976 ttttattaacaactttggaaacttgagaaacttgttatttttgatggttttat 25254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 28403700 - 28403575
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttg- 454  Q
    ||||| |||| || |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||     
T  28403700 ttaggattgcggtagtggtgtttgttgaccttttgaagaaattaactagtttattttttaaatagttttattaacaactttaggaacttgtgaaacttga 28403601  T
Q  455 -cttttttggatggttttattgatga 479  Q
      |||||||||||||||||| |||||    
T  28403600 ttttttttggatggttttatggatga 28403575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 392 - 479
Target Start/End: Original strand, 19863274 - 19863361
Alignment:
Q  392 agaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  19863274 agaaatttactagtttattttttagatagttttattaacaactttaggaacttgtgaaacttgcttttttggatggttttatggatga 19863361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 48966227 - 48966153
Alignment:
Q  354 gattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttatta 428  Q
    |||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  48966227 gattagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttatta 48966153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 46042299 - 46042383
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||| ||||||||||||||||    
T  46042299 ttttgacgaaattaactagtttattttttggataggtttattaacaactttagaaaattgtgaaacttacttttttggatggttt 46042383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 226322 - 226396
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttt 460  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||  || || |||||||||||||||    
T  226322 ttttgaaaaaattaactagtttattttttagataggtttattaacaactttagaaacttatgaaacttgcttttt 226396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 47371604 - 47371547
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47371604 gtttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 47371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 28403975 - 28403916
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  28403975 gtttgacgaatttgaccgagttaacactcggtaaactcatgtaaactcgaccgagtttac 28403916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 42304529 - 42304470
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  42304529 gtttaacgagtttgaccgagttaacactaggtaaactcgtgtaaactcgaccgagtttac 42304470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 48966520 - 48966462
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttta 171  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  48966520 gtttgacgagtttgaccgagttaatactcggtaaactcgtgtaaactctaccgagttta 48966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 32760123 - 32760054
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaagaaaa 187  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  32760123 acgagtttgaccgagttaacactcactaaactcgtgtaaactcgatcgagtttacttctaaaaaaaaaaa 32760054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 48966626 - 48966568
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||    
T  48966626 gttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaa 48966568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 49453089 - 49453015
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgta-----aactcgaccgagtttacatctaaaaaa 182  Q
    ||||||| ||||||||| |||||||||||||||||||||||||     |||||||||||||| ||||||||||||    
T  49453089 gtttgacaagtttgaccgagttaacactcggtaaactcgtgtaaactgaactcgaccgagttaacatctaaaaaa 49453015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 3583691 - 3583635
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtacc 99  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||    
T  3583691 gttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtacc 3583635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 4005158 - 4005218
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  4005158 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 4005218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 9192115 - 9192175
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  9192115 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 9192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 38535820 - 38535772
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  38535820 acgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 38558038 - 38557990
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  38558038 acgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38557990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 51106983 - 51107043
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  51106983 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 51107043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 3583586 - 3583528
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||||| ||| ||||||||||||||||||| ||| |||||| |||||||||    
T  3583586 agtttgacgagtttaaccgagttaacactcggtaaacttgtgcaaactcaaccgagttt 3583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 25253586 - 25253644
Alignment:
Q  114 tttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||||||| |||||||||    
T  25253586 tttgacgagtttgactgagttaacattcggtaaactcttgtaaactcgatcgagtttac 25253644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 52182484 - 52182542
Alignment:
Q  411 ttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||| |||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||    
T  52182484 tttttgatagttttattaacaactttaggaacttgtgaagcttacttttttggatggtt 52182542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 45273086 - 45273139
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||||||||  |||||||||||||||||||||||||| || ||||||    
T  45273086 gtttgacgagtttgactgagttaacactcggtaaactcgtgtaaccttgaccga 45273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 46328505 - 46328558
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||   ||||||||||||||||||||||||||||||||||||    
T  46328505 gtttaacgagtttgattgagttaacactcggtaaactcgtgtaaactcgaccga 46328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 49231526 - 49231579
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  49231526 gtttaacgagtttgactaagttaacaatcggtaaacttgtgtaaactcgaccga 49231579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 8147408 - 8147468
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  8147408 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 8147468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 26757706 - 26757766
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  26757706 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 26757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 41353512 - 41353572
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  41353512 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 41353572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 42637834 - 42637749
Alignment:
Q  386 ttttgaagaaattaactagtttatttttta--gatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    |||||||||||||| ||||||| ||||||   |||| | |||||||||||||||  || ||||| ||||||||||||||||||||||    
T  42637834 ttttgaagaaattagctagtttcttttttttggata-tgttattaacaactttagaaacttgtgcaacttgcttttttggatggttt 42637749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 46328399 - 46328454
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  46328399 gttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtac 46328454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 1243006 - 1242920
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  1243006 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 1242920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 5494883 - 5494825
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||| ||||||||| ||| | || ||||||||||||||| ||||||||||||    
T  5494883 gttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaa 5494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 11579130 - 11579088
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgt 154  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  11579130 agtttgacgagtttgaccgagttaacactcagtaaactcgtgt 11579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 28404081 - 28404023
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| ||||| | ||||| |||||||| | ||||||||||||    
T  28404081 gttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaa 28404023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 41353817 - 41353903
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  41353817 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttgtgaaactttctttttgggatgg 41353903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 49237101 - 49237043
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||| ||||||||||||||  |||| |||||| |||||||| |||||||||||||||    
T  49237101 gttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaa 49237043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 49453196 - 49453138
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| | | | |||||||| |||||| |||||||||||||||    
T  49453196 gttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaa 49453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 5494777 - 5494724
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||| |||||||||  |||||||||||| |||||||||||||||| ||||||    
T  5494777 gtttgatgagtttgactgagttaacactcgataaactcgtgtaaacttgaccga 5494724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 6313095 - 6313147
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  6313095 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 6313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 15834713 - 15834661
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  15834713 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 15834661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 25612611 - 25612663
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  25612611 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 25612663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 29396113 - 29396061
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  29396113 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 29396061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 51702114 - 51702166
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  51702114 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 51702166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 1243336 - 1243276
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| || |||  |||||||||    
T  1243336 agtttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttac 1243276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 8141018 - 8140963
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||| ||||||||||| |||||||||    
T  8141018 gttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtac 8140963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 15834819 - 15834764
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  15834819 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 15834764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 25831034 - 25830979
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||| ||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  25831034 gttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 25830979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 29219640 - 29219683
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  29219640 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 38535931 - 38535880
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttag 94  Q
    |||||||||||||||| |||| ||| |||| ||||||||||||||| |||||    
T  38535931 gttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttag 38535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 38558149 - 38558098
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttag 94  Q
    |||||||||||||||| |||| ||| |||| ||||||||||||||| |||||    
T  38558149 gttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttag 38558098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 45272980 - 45273035
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||| ||||||||||| |||||||||    
T  45272980 gttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtac 45273035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 5208979 - 5208933
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttatt 427  Q
    |||| |||||||||||||| ||||||| |||||| ||||||||||||    
T  5208979 tgaccttttgaagaaattacctagtttgttttttggatagttttatt 5208933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 11578825 - 11578739
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || || |||||||| |||||| ||||||    
T  11578825 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttatgaaactttctttttgggatgg 11578739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 15927390 - 15927448
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||||||||  |||||||| ||| ||||||  ||||||||| |||||||||    
T  15927390 agtttgacgagtttgactgagttaacattcgataaactattgtaaactcaaccgagttt 15927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 28387127 - 28387082
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||    
T  28387127 gagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 28387082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 49971547 - 49971490
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||| ||||||||||||||   |||| ||| ||||||||||||| |||||||||||||    
T  49971547 ttttttatatagttttattaac---tttaggaacttgtgaaacttgcctttttggatggtt 49971490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 25830928 - 25830876
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  25830928 gtttaacgagtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 25830876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 48177121 - 48177069
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  48177121 gtttaacgagtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 48177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 5209398 - 5209338
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||| | |||||||||||  |||||| ||||||| ||  ||||||||||    
T  5209398 agtttgacgagtttgatcgagttaacactcaataaacttgtgtaaaatcagccgagtttac 5209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 9322187 - 9322144
Alignment:
Q  122 gtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||  |||||||||||||||||||||||| |||||||||||    
T  9322187 gtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 9322144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 35177237 - 35177201
Alignment:
Q  115 ttgacgagtttgaccaagttaacactcggtaaactcg 151  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  35177237 ttgacgagtttgaccgagttaacactcgataaactcg 35177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 282 - 473
Target Start/End: Original strand, 33139100 - 33139293
Alignment:
Q  282 gggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttga 380  Q
    ||||||| |||||  |||| ||||||||||||| || |||||||| |||| || | ||| ||||||| |||| | |||||||||| || ||||||||||     
T  33139100 gggagcagataccaattagggttgtgattccgacggtggaaattcagatttcgactccgatgattgcaacgccggttagggttgcggtggtggtgtttgt 33139199  T
Q  381 tgactttttgaagaaattaactagtttatttt-ttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttat 473  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  33139200 tgaccttttgaagaaattaactagtttatttttttagatagttttattaacaactttaggaacttgtgaaacttgctattttggatggttttat 33139293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 243 - 479
Target Start/End: Complemental strand, 24966328 - 24966089
Alignment:
Q  243 tttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccg 339  Q
    |||||||| |||||||||  ||||| | |||||| ||| | ||||| |||||||  |||| |||| |||| ||| || ||||| |  |||| || |||||    
T  24966328 tttctttttctttcttctctgagttctcaaaccacgaacatgggagtacataccaattagggttgcgatttcgacggtggaaacttagatttcgacgccg 24966229  T
Q  340 gtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacg 439  Q
    | |||||| | || | |||||||||| || |||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  24966228 gagattgcaatgccggttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttgttttttagatagttttattaacaactttagg 24966129  T
Q  440 aagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    || |||||||||||| |||||||||||||||||| |||||    
T  24966128 aacttgtgaaacttgtttttttggatggttttatggatga 24966089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 229 - 461
Target Start/End: Original strand, 32890127 - 32890361
Alignment:
Q  229 cctgagatgaaacatttcttttactttcttc--tgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattc 325  Q
    ||||| || |||| || ||||| ||||||||  |||||||| |||||||||| | ||||||||||||| ||||  ||||  ||||| | || ||||||||    
T  32890127 cctgaaataaaacgttcctttttctttcttccctgagttttcaaaccatgaacatgggagcacataccagttatggttgc-attccaacggtggaaattc 32890225  T
Q  326 tgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagtttta 425  Q
      ||| || || ||||||||||||||| | |||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  32890226 atatttcgacgtcggtgattgcgacgccggttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagtttta 32890325  T
Q  426 ttaacaactttacgaagttgtgaaacttgctttttt 461  Q
    |||||||||||| ||| || |||||||| |||||||    
T  32890326 ttaacaactttaggaaattttgaaacttcctttttt 32890361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 470
Target Start/End: Complemental strand, 29509913 - 29509667
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttc--tgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| || |||| || ||||| ||||||||  |||||||| |||||||||| | |||||||| |||| ||||  ||||  ||||| | || ||||||    
T  29509913 ttcctgaaataaaacgttcctttttctttcttccttgagttttcaaaccatgaacatgggagcacgtaccagttatggttgc-attccaacggtggaaat 29509815  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || || | |  ||||||||||||||||||   |||||||||| || |||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  29509814 tcagagttcaacgccggtgattgcgacgccagttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactggtttattttttagatagttt 29509715  T
Q  424 tattaacaactttacgaagttgtgaaacttgc-ttttttggatggttt 470  Q
    |||||||||||| | ||| ||||||||||| | |||||||||||||||    
T  29509714 tattaacaacttaaggaaattgtgaaacttcctttttttggatggttt 29509667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 46862666 - 46862542
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgac-tttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttg 454  Q
    |||||||||| || || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  46862666 ttagggttgcggtggtagtgtttgttgacctttttgaagaaattaactagtttattttttagatagttttattaacaactttaagaacttgtgaaacttg 46862567  T
Q  455 cttttttggatggttttattgatga 479  Q
    |||||||||||| |||||| |||||    
T  46862566 cttttttggatgattttatggatga 46862542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 356 - 467
Target Start/End: Original strand, 50517495 - 50517606
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc 455  Q
    |||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||| ||||    
T  50517495 ttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatggatttattaacaactttaggaacttgtgaaatttgc 50517594  T
Q  456 ttttttggatgg 467  Q
    ||||||||||||    
T  50517595 ttttttggatgg 50517606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 227 - 426
Target Start/End: Original strand, 46286959 - 46287162
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| ||||||| |||||||| |||||||||  ||||| | |||||||||||| ||||||||||||| ||||| |||| |||||| | |  ||||||    
T  46286959 ttcctgaaatgaaacgtttctttttctttcttctccgagttctcaaaccatgaataagggagcacataccagttagggttgcgattccaacgatggaaat 46287058  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagttta-ttttttagatagtt 422  Q
    ||  ||| || | || ||||||||||||  | |||||||||| || ||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  46287059 tcaaatttcgactcccgtgattgcgacgtcggttagggttgcggtggtgatgtttgttgaccttttgaagaaattaactagtttatttttttagatagtt 46287158  T
Q  423 ttat 426  Q
    ||||    
T  46287159 ttat 46287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 410 - 479
Target Start/End: Complemental strand, 26490942 - 26490873
Alignment:
Q  410 tttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  26490942 tttttagatagttttattaacaactttaggaacttgtgaaacttgcttttttggatggttttatggatga 26490873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 24966551 - 24966492
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24966551 gtttgccgagtttgaccaagttaacacttggtaaactcgtgtaaactcgaccgagtttac 24966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 50517264 - 50517323
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  50517264 gtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgattttac 50517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 35518229 - 35518148
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    |||||||||| || ||||| |||| |||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  35518229 ttagggttgcggtggtggtatttgttgaccttttgaagaaattaactagtttatttattgaatagttttattaacaacttta 35518148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 25842673 - 25842622
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  25842673 ttttgaagaaattaactagtttattttttggatagctttattaacaacttta 25842622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 32889861 - 32889919
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||||||| ||| | | |||||||||||||||||||||||||||||    
T  32889861 gttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaa 32889919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 29856036 - 29856089
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29856036 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 29856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 40317362 - 40317279
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||||| |||||||  |||| |||||||| |||||||  || || ||||||||| ||||| ||||||||    
T  40317362 ttttgaagaaattaactagttcattttttgaatagatttattaataactttagaaacttctgaaacttggtttttcggatggtt 40317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 40327436 - 40327353
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||||||||| |||||||  |||| |||||||| |||||||  || || ||||||||| ||||| ||||||||    
T  40327436 ttttgaagaaattaactagttcattttttgaatagatttattaataactttagaaacttctgaaacttggtttttcggatggtt 40327353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 46286780 - 46286839
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||| | |||||||    
T  46286780 gtttgacgagtttgaccgagttaacactcgataaactcttgtaaactcgatcaagtttac 46286839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 53574182 - 53574052
Alignment:
Q  203 cctttacagtaacaaattgctggcttcctgagatgaaacatttcttttactttct--tctgagtttttaaaccatgaataggggagcacataccggttag 300  Q
    |||||||||||||| |||  | ||||| ||| ||||||| |||||||| ||||||  |||||||| | |||||||||| |||| |||| ||||| |||||    
T  53574182 cctttacagtaacacattattagcttcttgaaatgaaacgtttctttttctttcttctctgagttctcaaaccatgaacagggtagcatataccagttag 53574083  T
Q  301 tgttgtgattccgatgg-ggaaattctgatt 330  Q
     ||| ||||||||| || |||||||| ||||    
T  53574082 ggttctgattccgacggtggaaattccgatt 53574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 29510204 - 29510150
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggta 97  Q
    ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||    
T  29510204 gttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggta 29510150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 5800484 - 5800537
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||| |||||||||||||||||||||||    
T  5800484 gtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 5800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 24454025 - 24454086
Alignment:
Q  408 attttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||||| ||||||||||||||||| ||| |||  |||||||||||| |||||||||||||    
T  24454025 attttttatatagttttattaacaacgttaggaacgtgtgaaacttgcctttttggatggtt 24454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 28484416 - 28484469
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||| |||||||||||||||||||||||    
T  28484416 gtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 28484469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 30967024 - 30966972
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  30967024 gtttaacgagtttgactaagttaacactcggtaaactcgtgt-aactcgaccga 30966972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 37916309 - 37916362
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  37916309 gtttaacgagtttgactgagttaacactcagtaaactcgtgtaaactcgaccga 37916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 49501214 - 49501165
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcga 162  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  49501214 gtttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcga 49501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 49507279 - 49507230
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcga 162  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  49507279 gtttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcga 49507230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 49834515 - 49834462
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||||||||    
T  49834515 gtttaacgagtttgactgagttaatactcggtaaactcgtgtaaactcgaccga 49834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 469
Target Start/End: Original strand, 871954 - 872014
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||| ||||||||||||||||| |||| ||| |||||||| |||| |||||||||||||    
T  871954 ttttttggatagttttattaacaaatttaggaacttgtgaaatttgcctttttggatggtt 872014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 8084279 - 8084339
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  8084279 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 8084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 29469233 - 29469293
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  29469233 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 29469293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 871782 - 871833
Alignment:
Q  50 aaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||| || || |||||||||||||||||| ||||||||||||    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaa 871833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 26491155 - 26491096
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| ||||  ||||||||    
T  26491155 gtttgacgagtttgaccgagttaacatttggtaaactcgtgtaaattcgattgagtttac 26491096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 26955688 - 26955739
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    ||||||||||||||| | ||||||||||| |||||||||||||| |||||||    
T  26955688 ttttgaagaaattaaattgtttattttttggatagttttattaaaaacttta 26955739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 30967130 - 30967075
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  30967130 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 30967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 42937444 - 42937402
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgt 154  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  42937444 agtttgacgagtttgaccgagttaacactccgtaaactcgtgt 42937402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 4511634 - 4511593
Alignment:
Q  396 attaactagtttattttttagatagttttattaacaacttta 437  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  4511634 attaactagtttattttttagataattttattaacaaattta 4511593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 5441922 - 5441974
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  5441922 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 5441974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 8563391 - 8563342
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcg 161  Q
    |||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  8563391 agtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaactcg 8563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 23671407 - 23671362
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaa 157  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||    
T  23671407 agtttgacgagtttgagcaagttaagactcagtaaactcgtgtaaa 23671362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 29510098 - 29510061
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactc 150  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29510098 gtttgacgagtttgaccgagttaacactcggtaaactc 29510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 37828111 - 37828059
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  37828111 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 37828059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 48261598 - 48261650
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  48261598 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 48261650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 21306073 - 21306005
Alignment:
Q  402 tagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttt 470  Q
    ||||||||||||| ||| |||||||||| || ||||  || ||||| | ||||||||||||||||||||    
T  21306073 tagtttattttttggatggttttattaataaatttaaaaacttgtgtatcttgcttttttggatggttt 21306005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 23987611 - 23987666
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||  ||| | || ||||||||||||||| |||||||||    
T  23987611 gttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtac 23987666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 32322480 - 32322535
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||| ||||||||||| ||| | || ||||||||||||||| |||||||||    
T  32322480 gttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtac 32322535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 49501320 - 49501265
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    |||| |||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  49501320 gttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 49501265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 49507385 - 49507330
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    |||| |||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  49507385 gttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 49507330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 29469539 - 29469625
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || |||||||||||  ||||| ||||||    
T  29469539 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttgtgaaactttgtttttgggatgg 29469625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 41470333 - 41470299
Alignment:
Q  138 actcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||||| ||||||||||    
T  41470333 actcggtaaactcgtgtaaactcgtccgagtttac 41470299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 42937298 - 42937220
Alignment:
Q  389 tgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    ||||||||||| ||| ||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  42937298 tgaagaaattacctaatttgttttttggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 42937220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 54561324 - 54561358
Alignment:
Q  138 actcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||||||||| ||||||||||    
T  54561324 actcggtaaactcgtgtaaactcgtccgagtttac 54561358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 55165636 - 55165674
Alignment:
Q  144 taaactcgtgtaaactcgaccgagtttacatctaaaaaa 182  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  55165636 taaactcgtgtaaactcgaccaagtttacgtctaaaaaa 55165674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 23987716 - 23987768
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  23987716 gtttaacgagtttgactgagttaacactaggtaaactcgtgt-aactcgaccga 23987768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 27768584 - 27768636
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||| ||||||||||||||| |||||||||||    
T  27768584 gtttaacgagtttgactgagttaacattcggtaaactcgtgt-aactcgaccga 27768636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 29649686 - 29649634
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||| ||  |||||||||||||||||||||||| |||||||||||    
T  29649686 gtttaacgagtttaactgagttaacactcggtaaactcgtgt-aactcgaccga 29649634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 32322607 - 32322640
Alignment:
Q  133 ttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||||||||||||||||||| |||||    
T  32322607 ttaacactcggtaaactcgtgtaaactcaaccga 32322640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 46862751 - 46862694
Alignment:
Q  257 ttctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    ||||||||| | |||||||||| ||||||||||||||  ||||| |||| ||||||||    
T  46862751 ttctgagttctcaaaccatgaacaggggagcacatactagttagggttgcgattccga 46862694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 51321384 - 51321428
Alignment:
Q  121 agtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||    
T  51321384 agtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 51321428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 26448701 - 26448748
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactc 160  Q
    |||||||||||||||||| ||||||||| || |||||||| ||||||||    
T  26448701 agtttgacgagtttgaccgagttaacacgcgttaaactcg-gtaaactc 26448748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 296 - 473
Target Start/End: Complemental strand, 12737864 - 12737686
Alignment:
Q  296 gttagtgttgtgattccgatggggaaa-ttctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaaga 394  Q
    ||||| |||| |||||||| || |||| ||| |||| ||  |||| |||||||||||  | ||||||||||||| |||||||||| |||| |||||||||    
T  12737864 gttagggttgcgattccgacggtgaaaattcagatttcgatgccgatgattgcgacgttggttagggttgcagtggtggtgtttgttgaccttttgaaga 12737765  T
Q  395 aattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttat 473  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  12737764 aattaactagtttatttttaagatagtattattaacaactttaggaacttgtgaaacttgcttttttggatggttttat 12737686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 479
Target Start/End: Complemental strand, 27878430 - 27878208
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||| | |||||||||||||  | || ||||| |||||||  | |||||||  |||| || ||||||||||||  | |  | |    
T  27878430 tctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtcattccgaaagtggaaatttagatttcgacgccggtgattgttatgtcggt 27878331  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    |||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  27878330 tagggttgcgatggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattatcaactttaggaacttgtgaaacttgct 27878231  T
Q  457 tttttggatggttttattgatga 479  Q
    ||||||||||||||||| |||||    
T  27878230 tttttggatggttttatagatga 27878208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 479
Target Start/End: Complemental strand, 27915374 - 27915152
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggggaaattct-gattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||| | |||||||||||||  | || |||||||||||||  | |||| | | |||| || ||||||||||||  | |  | |    
T  27915374 tctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtgattccgaaagcgaaaatttagatttcgacgccggtgattgttatgtcggt 27915275  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    |||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  27915274 tagggttgcgatggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattaacaattttaggaacttgtgaaacttgct 27915175  T
Q  457 tttttggatggttttattgatga 479  Q
    ||||||||||||||||| |||||    
T  27915174 tttttggatggttttatagatga 27915152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 479
Target Start/End: Complemental strand, 27961793 - 27961571
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatggggaaattct-gattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||| | |||||||||||||  | || |||||||||||||  | |||| | | |||| || ||||||||||||  | |  | |    
T  27961793 tctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtgattccgaaagcgaaaatttagatttcgacgccggtgattgttatgtcggt 27961694  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    |||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  27961693 tagggttgcgatggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattaacaattttaggaacttgtgaaacttgct 27961594  T
Q  457 tttttggatggttttattgatga 479  Q
    ||||||||||||||||| |||||    
T  27961593 tttttggatggttttatagatga 27961571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 479
Target Start/End: Complemental strand, 28018611 - 28018389
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||| | |||||||||||||  | || ||||| |||||||  | |||||||  |||| || ||||||||||||  | |  | |    
T  28018611 tctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtcattccgaaagtggaaatttagatttcgacgccggtgattgttatgtcggt 28018512  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    |||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  28018511 tagggttgcgatggtggtgtttgttgaccttttgaagaaattaactagtttattttttagatagttttattatcaactttaggaacttgtgaaacttgct 28018412  T
Q  457 tttttggatggttttattgatga 479  Q
    ||||||||||||||||| |||||    
T  28018411 tttttggatggttttatagatga 28018389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 461
Target Start/End: Original strand, 42423454 - 42423690
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttc--tgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||| || |||| || ||||| ||||||||  |||||||| |||||||||| | | ||||||||||| ||||  ||||  ||||| | || ||||||    
T  42423454 ttcctgaaataaaacgttcctttttctttcttccctgagttttcaaaccatgaacatgagagcacataccagttatggttgc-attccaacggtggaaat 42423552  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || |||| || ||||||||||||||||||   |||||||||| || |||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  42423553 tcagatttcgacgccggtgattgcgacgccagttagggttgcggtggtggtgttagttgaccttttgaagaaattaactagtttattttttagatagttt 42423652  T
Q  424 tattaacaactttacgaagttgtgaaacttgctttttt 461  Q
    |||||||||||||| ||| ||||||||||| |||||||    
T  42423653 tattaacaactttaggaaattgtgaaacttcctttttt 42423690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 227 - 463
Target Start/End: Complemental strand, 12522257 - 12522018
Alignment:
Q  227 ttcctgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaat 323  Q
    ||||||||||||||  |||| ||| |||||||||   |||| | |||| ||||| ||||||||||||||| ||||| |||| |||||||  || ||||||    
T  12522257 ttcctgagatgaaatgtttccttttctttcttctctaagttctcaaacgatgaacaggggagcacataccagttagggttgcgattccggcggtggaaat 12522158  T
Q  324 tctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttt 423  Q
    || ||||||| ||||| ||||||||  |  |||| ||||||| |  |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  12522157 tcagattgcgacgccgatgattgcgttgtcgatttgggttgcggcggtggtgtttgttgaccttttgaagaaattaactagtttatttttttgatagttt 12522058  T
Q  424 tattaacaactttacgaagttgtgaaacttgcttttttgg 463  Q
    || ||||||||||| ||| ||||||||| |||||||||||    
T  12522057 taataacaactttaggaacttgtgaaacatgcttttttgg 12522018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 426
Target Start/End: Complemental strand, 6387974 - 6387748
Alignment:
Q  205 tttacagtaacaaattgctggcttcctgagatgaaacatttcttttactttct----tctgagtttttaaaccatgaataggggagcacataccggttag 300  Q
    |||||||||||| |||||| ||||||||| ||||||| ||||||||  ||| |    |||||||| | |||||||||| | | |||||||||   |||||    
T  6387974 tttacagtaacacattgctagcttcctgaaatgaaacgtttctttttttttttcttatctgagttctcaaaccatgaacatgagagcacatattagttag 6387875  T
Q  301 tgttgtgattccgatgggg-aaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaatta 399  Q
     |||| |||| |||||||| |||||| ||||||  ||||||||||||||| |  | |||||||||| || ||||||||||||||||||||||||||||||    
T  6387874 ggttgcgatttcgatgggggaaattccgattgcaacgccggtgattgcgatgttggttagggttgcggtggtggtgtttgatgactttttgaagaaatta 6387775  T
Q  400 actagtttattttttagatagttttat 426  Q
     | |||||||||||| |||||||||||    
T  6387774 gccagtttattttttggatagttttat 6387748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 479
Target Start/End: Complemental strand, 27974725 - 27974564
Alignment:
Q  318 ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttaga 417  Q
    |||||||  |||| || ||||||||||||||| || | ||||| || | || |||||||||| | || |||||||||||||||||||||||||||||||     
T  27974725 ggaaatttagattccgacgccggtgattgcgatgccggttaggatttcggtggtggtgtttgtttaccttttgaagaaattaactagtttattttttagg 27974626  T
Q  418 tagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  27974625 tagttttgtcaacaactttaggaacttgtgaaacttgcttttttggatggttttatggatga 27974564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 479
Target Start/End: Complemental strand, 28031994 - 28031833
Alignment:
Q  318 ggaaattctgattgcggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttaga 417  Q
    |||||||  |||| || ||||||||||||||| || | ||||| || | || |||||||||| | || |||||||||||||||||||||||||||||||     
T  28031994 ggaaatttagattccgacgccggtgattgcgatgccggttaggatttcggtggtggtgtttgtttaccttttgaagaaattaactagtttattttttagg 28031895  T
Q  418 tagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  28031894 tagttttgtcaacaactttaggaacttgtgaaacttgcttttttggatggttttatggatga 28031833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 386 - 479
Target Start/End: Original strand, 44977141 - 44977234
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||||    
T  44977141 ttttgaagaaattaactagtttattttttagatagttttattaacaactttaggaacttgtgaaacttgcttttttgaatggttttatggatga 44977234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 370 - 478
Target Start/End: Original strand, 24082593 - 24082701
Alignment:
Q  370 gtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||    
T  24082593 gtggtgtttgatgaccttctgaagaaattaagtagtttattttttagatagtttaattaacaactttacgaacttgtgaaacttgcttttttggattatt 24082692  T
Q  470 ttattgatg 478  Q
    |||| ||||    
T  24082693 ttatggatg 24082701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 27869659 - 27869534
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttg- 454  Q
    |||||||||| || |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||     
T  27869659 ttagggttgcggtggtggtgtttgttgaccttttgaagaaattaactagtttat-ttttagatagttttattaacaactttaggaacttgtgaaacttgt 27869561  T
Q  455 --cttttttggatggttttattgatga 479  Q
       |||||||||||||||||| |||||    
T  27869560 tttttttttggatggttttatagatga 27869534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 8029571 - 8029450
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc 455  Q
    |||||||||  || || ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  8029571 ttagggttgtggtggtagtgtttgttgacttttt-aagaaattaactagtttattttttagatagttttattaacaattttaggaacttgtgaaacttgc 8029473  T
Q  456 ttttttggatggttttattgatga 479  Q
    | |||||||||||||||| |||||    
T  8029472 t-ttttggatggttttatggatga 8029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 8029870 - 8029787
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaagaaaatatttggcc 196  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| | ||||||    
T  8029870 gtttgacgagtttgaccgagttaacactcggtaaaatcgtgtaaactcgaccgagtttacatctagaaaaaaaaaaaattggcc 8029787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 3007529 - 3007408
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc 455  Q
    |||| ||||| || ||| |||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||      
T  3007529 ttagagttgcggtggtgttgtttgttgaccatttgaagaaattaactagtttattttttatatagttttattaacaactttatgaacttgtaaaactt-t 3007431  T
Q  456 ttttttggatggttttattgatg 478  Q
    |||||||||||||| ||| ||||    
T  3007430 ttttttggatggttctatggatg 3007408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 6387559 - 6387498
Alignment:
Q  418 tagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||    
T  6387559 tagttttattaacaactttataaacttgtgaaacttgcttttttggatggttttatggatga 6387498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 27915608 - 27915551
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  27915608 gtttgacgagtttgaccgagttaacactcgatgaactcgtgtaaactcgaccgagttt 27915551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 27962027 - 27961970
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  27962027 gtttgacgagtttgaccgagttaacactcgatgaactcgtgtaaactcgaccgagttt 27961970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 418 - 479
Target Start/End: Original strand, 41394306 - 41394367
Alignment:
Q  418 tagttttattaacaactttacgaagttgtgaaacttgcttttttggatggttttattgatga 479  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  41394306 tagttttattaacaactttaggaacttgtgaaacttgcttttttagatggttttatggatga 41394367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 24082283 - 24082343
Alignment:
Q  122 gtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaa 182  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  24082283 gtttgaccaagttaacactcggtaaactcgtataaactaaaccgagtttgcatctaaaaaa 24082343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 453
Target Start/End: Complemental strand, 33177559 - 33177492
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaactt 453  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||  || |||||||||||    
T  33177559 ttttgaaaaaattaactagtttattttttggataggtttattaacaactttaaaaacttgtgaaactt 33177492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 8029976 - 8029918
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  8029976 gttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaa 8029918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 42423261 - 42423318
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||    
T  42423261 gtttgacgagtttgaccgagttaacactgggtaaactcctgtaaactctaccgagttt 42423318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 9288281 - 9288226
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||    
T  9288281 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtac 9288226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 16364226 - 16364279
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  16364226 gtttaacgagtttgactaaattaacactcggtaaactcgtgtaaattcgaccga 16364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 26856625 - 26856678
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  26856625 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaattcgaccga 26856678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 27878664 - 27878607
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||||||   |||||||||||| | |||||||||||||||||||||||||    
T  27878664 gtttgacgagtttgatagagttaacactcgatgaactcgtgtaaactcgaccgagttt 27878607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 28018845 - 28018788
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||||||||||   |||||||||||| | |||||||||||||||||||||||||    
T  28018845 gtttgacgagtttgatagagttaacactcgatgaactcgtgtaaactcgaccgagttt 28018788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 31625828 - 31625877
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcga 162  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  31625828 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcga 31625877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 35879824 - 35879885
Alignment:
Q  408 attttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||||| ||||||||||||||||| ||| |||  |||||||||||| |||||||||||||    
T  35879824 attttttatatagttttattaacaacgttaggaacgtgtgaaacttgcctttttggatggtt 35879885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 37131245 - 37131184
Alignment:
Q  408 attttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||||  |||||||||||||||| |||| ||| ||||||||||||| |||||||||||||    
T  37131245 attttttttatagttttattaacaattttaggaacttgtgaaacttgcctttttggatggtt 37131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 4870836 - 4870784
Alignment:
Q  386 ttttgaagaaattaactagtttattttttag-atagttttattaacaacttta 437  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  4870836 ttttgaagtaattaactagtttatttttttggatagttttattaacaacttta 4870784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 12522463 - 12522415
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcg 161  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  12522463 gtttgacgagtttgaccgagttaacacttggtaaactcgtgtaagctcg 12522415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 469
Target Start/End: Original strand, 17234872 - 17234932
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||| |||||||| ||||||||||||  ||| ||||||||||||| |||||||||||||    
T  17234872 tttttttgatagtttgattaacaactttgtgaacttgtgaaacttgcctttttggatggtt 17234932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 19484285 - 19484345
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  19484285 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 19484345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 43308301 - 43308237
Alignment:
Q  37 atcatggttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||| ||||||||||||||||||||| ||||| || ||| ||||||| ||| ||||||||||||    
T  43308301 atcattgttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaa 43308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 43166357 - 43166314
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  43166357 gtttgacgagtttgactgagttaacactcggtaaactcgtgtaa 43166314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 43166463 - 43166408
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| | ||| || ||||||||||||||| |||||||||    
T  43166463 gttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtac 43166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 19484589 - 19484675
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || ||||||||||| |||||| ||||||    
T  19484589 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttataaacttgtgaaactttctttttgggatgg 19484675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 6388156 - 6388094
Alignment:
Q  112 agtttgacgagtttgaccaagttaac----actcggtaaactcgtgtaaactcgaccgagttt 170  Q
    |||||||| |||||||||||||||||    ||||| |||||||||||||||| ||||||||||    
T  6388156 agtttgacaagtttgaccaagttaacgtacactcgataaactcgtgtaaacttgaccgagttt 6388094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 462
Target Start/End: Original strand, 7760953 - 7761006
Alignment:
Q  409 ttttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttg 462  Q
    ||||| |||||||||||||||||||| || ||| ||||||||||||| ||||||    
T  7760953 tttttaagatagttttattaacaactctaggaacttgtgaaacttgcctttttg 7761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 24067259 - 24067321
Alignment:
Q  405 tttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||||||||||  |||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||    
T  24067259 tttatttttta--tagttttattaacaactttaggaacttgagaaacttgcctttttgaatggtt 24067321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 37857409 - 37857456
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  37857409 acgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 37857456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 8029685 - 8029599
Alignment:
Q  230 ctgagatgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    |||| ||||||| |||||||| |||||||||  || || | |||| ||||| ||||||||||||||| |||| ||||| ||||||||    
T  8029685 ctgaaatgaaacgtttctttttctttcttctctgaattctcaaactatgaacaggggagcacataccagttaatgttgcgattccga 8029599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 10295126 - 10295071
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    |||||| |||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  10295126 gttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 10295071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 18958514 - 18958459
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  18958514 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 18958459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 19717661 - 19717606
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  19717661 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 19717606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 26620376 - 26620329
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaact 159  Q
    |||||||||||||||| | |||||||||||| ||||||| ||||||||    
T  26620376 agtttgacgagtttgatcgagttaacactcgataaactcatgtaaact 26620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 31625722 - 31625777
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  31625722 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 31625777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 32498079 - 32498114
Alignment:
Q  131 agttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||| |||||||||||||||||||||||||    
T  32498079 agttaacactaggtaaactcgtgtaaactcgaccga 32498114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 39467193 - 39467147
Alignment:
Q  119 cgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||    
T  39467193 cgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 39467147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 39467305 - 39467250
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || |||||| |||||||| |||||||||    
T  39467305 gttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtac 39467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 44725472 - 44725429
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaa 156  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  44725472 gtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 44725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 18305650 - 18305605
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||    
T  18305650 gagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 18305605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 41394193 - 41394278
Alignment:
Q  231 tgagatgaaacatttcttttactttcttctg--agtttttaaaccatgaataggggagcacataccggttagtgttgtgattccga 314  Q
    ||||||||||  |||||||| |||||||||   |||| | ||| |||||| ||||||||||||||| ||||| |||| ||||||||    
T  41394193 tgagatgaaaggtttctttttctttcttctctaagttctcaaatcatgaacaggggagcacataccagttagggttgcgattccga 41394278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 14781813 - 14781761
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  14781813 gtttaacgagtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 14781761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 43308181 - 43308137
Alignment:
Q  121 agtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||    
T  43308181 agtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 43308137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 7466846 - 7466893
Alignment:
Q  118 acgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||||||||||  |||||||||||| ||||||||||| |||||||||||    
T  7466846 acgagtttgactgagttaacactcgataaactcgtgt-aactcgaccga 7466893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 258 - 473
Target Start/End: Original strand, 9140 - 9360
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacata----ccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgc 352  Q
    |||||||| | |||||||||| |||||||||||||    || ||||| ||||||||| ||| || ||||||||  ||| |  ||||| | |||||||| |    
T  9140 tctgagttctcaaaccatgaacaggggagcacatatataccagttagggttgtgatttcgacggtggaaattcatatttcaacgccgtttattgcgacac 9239  T
Q  353 ggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaact 452  Q
     | |||||||||  || || ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  9240 cggttagggttgttgtggtagtgtttgttgtccttttgaagaaattaactagtttattttttagatagttttattaacaactttaggaacttgtgaaact 9339  T
Q  453 tgcttttttggatggttttat 473  Q
    |||||||||||||||||||||    
T  9340 tgcttttttggatggttttat 9360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 235 - 478
Target Start/End: Original strand, 89540 - 89787
Alignment:
Q  235 atgaaacatttcttttactttcttct--gagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattg 331  Q
    ||||||| |||||||| |||||||||  ||||| | |||||||||| | || |||| ||| | ||||| |||| |||||||| || ||||||||  |||     
T  89540 atgaaacgtttctttttctttcttctctgagttctcaaaccatgaacatggaagcatataacagttagggttgcgattccgacggtggaaattcatattt 89639  T
Q  332 cggcgccggtgattgcgacgcggattagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatag-ttttattaac 430  Q
    || ||  || |||| |||||| | |||||||||||||  |||| |||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  89640 cgccgtaggcgattacgacgccggttagggttgcagtgatggtctttgttgaccttttgaagaaattaaatagtttattttttagatagtttttattaac 89739  T
Q  431 aactttacgaagttgtgaaacttgcttttttggatggttttattgatg 478  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||| ||||    
T  89740 aactttaggaacttgtgaaactttcttttttggatggttttatggatg 89787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 89245 - 89305
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaata 103  Q
    |||||| |||||||||||||| |||   |||||| |||||||| || ||||||||||||||    
T  89245 gttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaata 89305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 258 - 479
Target Start/End: Original strand, 34218713 - 34218934
Alignment:
Q  258 tctgagtttttaaaccatgaataggggagcacataccggttagtgttgtgattccgatgg-ggaaattctgattgcggcgccggtgattgcgacgcggat 356  Q
    |||||||| | |||||||||||||||||||||||| | ||||| ||||  ||||||| || |||||||| |||| || |||||||||||| ||||    |    
T  34218713 tctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaattccgacggtggaaattcagatttcgacgccggtgattgtgacgtcagt 34218812  T
Q  357 tagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgct 456  Q
    ||||||||| || |||||||||| ||| | ||||||||||||||||| |||||||| ||||||||||||| |||||||| | ||| |||| ||| || |     
T  34218813 tagggttgcggtggtggtgtttgttga-tctttgaagaaattaactaatttattttctagatagttttatcaacaacttcaagaacttgtaaaagttaca 34218911  T
Q  457 tttttggatggttttattgatga 479  Q
    |||||||||| |||||| |||||    
T  34218912 tttttggatgattttatggatga 34218934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 356 - 471
Target Start/End: Complemental strand, 29716621 - 29716506
Alignment:
Q  356 ttagggttgcagttgtggtgtttgatgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc 455  Q
    |||||||| | || |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  29716621 ttagggttacggtggtggtgcttgttgaccttttgaagaaattaactagtttattttttagatagttttattaaaaactttaggaacttgtgtaacttgc 29716522  T
Q  456 ttttttggatggtttt 471  Q
    ||||||| ||||||||    
T  29716521 ttttttgaatggtttt 29716506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 36196068 - 36195987
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgc-ttttttggatggttt 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    |  |||||||||||| |||||||||||||||    
T  36196068 ttttgaagaaattaactagtttattttttggatagttttattaacaacttt----atatgtgaaacttgctttttttggatggttt 36195987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 31913805 - 31913883
Alignment:
Q  393 gaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttg-cttttttggatggttt 470  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||||  |||||||||||||||    
T  31913805 gaaattaactagtttattttttggataggtttattaacaactttaaaaacttgtgaaacttgtgttttttggatggttt 31913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 4240148 - 4240095
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4240148 gtttaacgagtttgacaaagttaacactcggtaaactcgtgtaaactcgaccga 4240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 5651218 - 5651158
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  5651218 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 21490040 - 21490107
Alignment:
Q  401 ctagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    ||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  21490040 ctagtttttttttta-atagttttattaacaactttaagaacttgtgaaacttgcctttttggatggtt 21490107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 15286184 - 15286133
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaacttta 437  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  15286184 ttttgaagaaattaacttgtttattttttggatagttttattaacaacttta 15286133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 7125196 - 7125136
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||    
T  7125196 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 7125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 4550046 - 4549991
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || |||||||||||||||||||||||||    
T  4550046 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtac 4549991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 5650498 - 5650412
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| |||||||||||||| ||| ||| |||||| ||||||||||||  ||| ||||  || |||||||||||||||||| ||||||    
T  5650498 tgaccttttgaagaaattacctaatttgtttttttgatagttttattctcaagtttagaaacttgtgaaacttgctttttgggatgg 5650412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 5651323 - 5651265
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||||||    
T  5651323 gttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaa 5651265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 37798151 - 37798109
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgt 154  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  37798151 agtttgacgagtttgaccgagttaacactcggtaaactcgtgt 37798109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 37014374 - 37014426
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37014374 gtttaacgagtttgaccgagttaacactcggtaaactcgtgt-aactcgaccga 37014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 16497571 - 16497519
Alignment:
Q  417 atagttttattaacaactttacgaagttgtgaaacttgcttttttggatggtt 469  Q
    |||| ||||||||||||||||  || |||||||||||||||||||||||||||    
T  16497571 ataggtttattaacaactttagcaacttgtgaaacttgcttttttggatggtt 16497519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 28623198 - 28623138
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || |||  |||||||||    
T  28623198 agtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 28623138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 1460934 - 1460879
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||| |||||||||    
T  1460934 gttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtac 1460879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 29758776 - 29758844
Alignment:
Q  113 gtttgacgagtttgac-caagttaacactcggtaaactcgtgtaaactcgaccgagtttacatctaaaaaa 182  Q
    |||||||||||||||| | |||||||  |||||||||| ||||||||||||||||||||||  ||||||||    
T  29758776 gtttgacgagtttgactcgagttaac--tcggtaaacttgtgtaaactcgaccgagtttacgactaaaaaa 29758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 13926458 - 13926503
Alignment:
Q  120 gagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  13926458 gagtttgactaagttaacactcggtaaactcgtgt-aactcgaccga 13926503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 34218540 - 34218590
Alignment:
Q  122 gtttgaccaagttaacactcggtaaactcgtgtaaactcgaccgagtttac 172  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||||||||    
T  34218540 gtttgaccgagttaatactcagtaaattcgtgtaaactcgaccgagtttac 34218590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 1151973 - 1151921
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  1151973 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 1151921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 13999776 - 13999724
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  13999776 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 13999724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 33892873 - 33892824
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcg 161  Q
    |||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  33892873 agtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaactcg 33892824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 39852890 - 39852942
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  39852890 gtttaacgagtttgacggagttaacactcggtaaactcgtgt-aactcgaccga 39852942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 13926345 - 13926400
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||| ||||||||||| |||||||||    
T  13926345 gttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtac 13926400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 29716920 - 29716873
Alignment:
Q  50 aaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggta 97  Q
    |||||||||||||| ||| ||||||||| |||||||||| ||||||||    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggta 29716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 28622893 - 28622807
Alignment:
Q  381 tgactttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttttggatgg 467  Q
    |||| ||| |||||||||| ||||||| |||||| ||||||||||||  ||| ||||  || |||| |||||| |||||| ||||||    
T  28622893 tgacctttcgaagaaattacctagtttgttttttggatagttttattctcaagtttagaaacttgtaaaactttctttttgggatgg 28622807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 5949631 - 5949683
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||| ||||| |||||||||||    
T  5949631 gtttaacgagtttgactgagttaacactcggtaaacacgtgt-aactcgaccga 5949683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 38243 - 38313
Alignment:
Q  386 ttttgaagaaattaactagtttattttttagatagttttattaacaactttacgaagttgtgaaacttgcttttt 460  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||   |||||||||||||    
T  38243 ttttgaagaaattaactagtttattttttgaatagttttattaacaatttta-gaagtt---aaacttgcttttt 38313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 1040 - 982
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    |||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||    
T  1040 gttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaa 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 935 - 888
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaact 159  Q
    ||||||| |||||||||| ||||||||||  |||||||||||||||||    
T  935 agtttgatgagtttgaccgagttaacacttagtaaactcgtgtaaact 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 57728 - 57693
Alignment:
Q  131 agttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||||||||||||||||||||||||||||    
T  57728 agttaacactcggtaaactcgtgtaaactcgaccga 57693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 57852 - 57797
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  57852 gttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 57797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 39419 - 39365
Alignment:
Q  47 cgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtaccaa 101  Q
    ||||||||||||||||| ||| | || ||||||||||||||| ||||||||||||    
T  39419 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaa 39365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 39317 - 39264
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    ||||||||||||||||  ||||| |||| | |||||||||||||||||||||||    
T  39317 gtttgacgagtttgactgagttagcacttgataaactcgtgtaaactcgaccga 39264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 11044 - 11096
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  11044 gtttaacgagtttgactgagttaacactcggtaaactcgtgt-aactcgaccga 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 10938 - 10993
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||||||||||||||||||| ||| | || ||||||||||||| | |||||||||    
T  10938 gttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtac 10993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 1280 - 1335
Alignment:
Q  43 gttccgcaaatcgagtgttaagtcttcaagtttaccgagtttacgtgtttaggtac 98  Q
    ||||| ||||||||||||||| ||| | || ||||||||||||||| |||||||||    
T  1280 gttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtac 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 16711 - 16658
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||| |||||||||| |||||||| |||||    
T  16711 gtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaaccga 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 1437 - 1486
Alignment:
Q  112 agtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcg 161  Q
    |||||||||||||| ||| |||||||||  | ||||||||||||||||||    
T  1437 agtttgacgagtttaaccgagttaacacgtgttaaactcgtgtaaactcg 1486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 20947 - 20894
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||| |||||||||| |||||||| |||||    
T  20947 gtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaaccga 20894  T

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Target: scaffold0152; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 28854 - 28907
Alignment:
Q  113 gtttgacgagtttgaccaagttaacactcggtaaactcgtgtaaactcgaccga 166  Q
    |||| |||||||||||  |||||||||| |||||||||| |||||||| |||||    
T  28854 gtttaacgagtttgactgagttaacacttggtaaactcgggtaaactcaaccga 28907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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