View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11951_low_8 (Length: 294)
Name: NF11951_low_8
Description: NF11951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11951_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 23040657 - 23040925
Alignment:
| Q |
13 |
gagatcatcaaaactgatgctgaaaattttagggaacttgttcagaaattaactgggaaacctagtgaagnnnnnnngaatttcaagaacaagacaaggg |
112 |
Q |
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| T |
23040657 |
gagatcatcaaaactgatgctgaaaattttagggaacttgttcagaaattaactgggaaacctagtgaagaaaaaaagaatttcaagaacaagacaaggg |
23040756 |
T |
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| Q |
113 |
taatagtagaaggatcaaaaaatgaagga-----agagagcaagaatcttcaagcagtggaagtggtttatcatcagaggattgttcaagaatggtaaca |
207 |
Q |
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|||||||||| ||||||||| |||||| | | ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| | |
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| T |
23040757 |
taatagtagatggatcaaaacatgaagaatcttcaaggagca-----ctacaagcagtggaagtggtttatcatcagaggattgttcaagaatgataaga |
23040851 |
T |
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| Q |
208 |
ataaaaaatgaggtgagtaataatggtggtttttgggggttggatctaacaatggataaagtcaaagaagaagt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23040852 |
ataaaaaatgaggtgagtaataatggtggtttttgggggttggatctaacaatggataaagtcaaagaagaagt |
23040925 |
T |
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