View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11952_high_12 (Length: 440)
Name: NF11952_high_12
Description: NF11952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11952_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 16 - 430
Target Start/End: Complemental strand, 34427044 - 34426630
Alignment:
| Q |
16 |
ctttttactttactgtgttagatttgacgattccatgcctgaaaacaccagagaggtataaactatgaaatattatctcatatcttgattaactttgtac |
115 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
34427044 |
ctttttactttactgtattagatttgacgattccatgcctgaaaacaccagagaggtataaactatgaattattatctcatatcttgattaactttgtac |
34426945 |
T |
|
| Q |
116 |
tcctgatgtcaaacatcctgtgccctttatgtgattgacaatgcaaatgaacagcatgaaatttgatgttgcctcaaccttaaatattgtagctttttag |
215 |
Q |
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| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34426944 |
tactgatgtcaaacatcctgtgccctttatgtgattgacaatgcaaatgaacagcatgaaatttgatgttgcctcaaccttaaatattgtagcttgttag |
34426845 |
T |
|
| Q |
216 |
ataatcctttcttgacttgaccaatggtctcagactcgatttgtagtttagatattttcagattcttaatagcatagatttgagtcttttgccactctca |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426844 |
ataatcctttcttgacttgaccaatggtctcagactcgattattagtttagatattttcagattcttaatagcatagatttgagtcttttgccactctca |
34426745 |
T |
|
| Q |
316 |
tacatagtcacagataaaaagaacttggaatagtttacatgcctcaagatattttcgatcagaaattttcacaacagtgctagtttcagtatcaatacca |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426744 |
tacatagtcacagataaaaagaacttggaatagtttacatgcctcaagatattttcgatcagaaattttcacaacagtgctagtttcagtatcaatacca |
34426645 |
T |
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| Q |
416 |
ctttgtatcatctca |
430 |
Q |
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||||||||||||||| |
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| T |
34426644 |
ctttgtatcatctca |
34426630 |
T |
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