View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11953_high_17 (Length: 268)
Name: NF11953_high_17
Description: NF11953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11953_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 9046511 - 9046748
Alignment:
| Q |
15 |
gaggatagcatcaagaaaaaattagttttctcaacttgtgactaa-tgattgtgccaaaaagattttggtttgaggtttgattcattcagccgatcaatt |
113 |
Q |
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| T |
9046511 |
gaggatagcatcaagaaaaaattagttctctcaacttgtgactaaatgattgtaccaaaaagattttggtttgaggtttgattcattcagccgatcaatt |
9046610 |
T |
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| Q |
114 |
taactgacgtgaggctgatattgtattccaacttcttttgtgcaattcataaatcttttttaggataagatgaagaccgtatttttcttacgtgctcaac |
213 |
Q |
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| T |
9046611 |
taactgacgtgaggctgatattgtattccaacttcttttgtgcaattcataaatcttttttaggataagatgtagaccgtatttttcttacgtgctcaac |
9046710 |
T |
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| Q |
214 |
aagtaaactattttcttttgcaggaacgtgtgaactat |
251 |
Q |
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| T |
9046711 |
aagtaaactattttcttttgcaggaacatgtgaactat |
9046748 |
T |
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