View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11953_high_18 (Length: 250)
Name: NF11953_high_18
Description: NF11953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11953_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 45751202 - 45750961
Alignment:
| Q |
1 |
aaagatttctaggcatattggtattagcctagactctggagatatatgattttgttattcttagtttctactcaataataacatagtattcctagactac |
100 |
Q |
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||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45751202 |
aaagattgctaggcatattggtattaccctagactctggagatatatgattttgttattcttagtttctactcaataataacatagtattcctagactat |
45751103 |
T |
|
| Q |
101 |
ggagatgtaagattttttattcctagtttctgttctaaataacagtattcatttggcttccaagtgacaagagaaacttcactggatgttttttgctaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45751102 |
ggagatgtaagattttttattcctagtttctgttctaaataacagtattcatttggcttccaagtgacaagagaaacttcactggatgttttttgctaac |
45751003 |
T |
|
| Q |
201 |
cgtatattgtctgtaccatatagcaccctagtaccctttgct |
242 |
Q |
| |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45751002 |
cgtatattgtctgtaccatatagcaccctagtaccctgtgct |
45750961 |
T |
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