View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11954_low_10 (Length: 365)

Name: NF11954_low_10
Description: NF11954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11954_low_10
NF11954_low_10
[»] chr3 (84 HSPs)
chr3 (15-272)||(39335831-39336088)
chr3 (131-343)||(39336208-39336418)
chr3 (177-317)||(47964541-47964681)
chr3 (180-317)||(37990665-37990802)
chr3 (204-317)||(46546375-46546488)
chr3 (194-317)||(12114602-12114725)
chr3 (186-317)||(43346823-43346954)
chr3 (184-317)||(37991007-37991140)
chr3 (206-314)||(21832395-21832503)
chr3 (184-315)||(15772851-15772982)
chr3 (186-317)||(35946517-35946648)
chr3 (186-312)||(22304569-22304695)
chr3 (186-317)||(32462932-32463064)
chr3 (184-317)||(32589699-32589831)
chr3 (176-317)||(45395675-45395816)
chr3 (193-316)||(1634353-1634477)
chr3 (189-317)||(29644616-29644744)
chr3 (189-317)||(29644937-29645065)
chr3 (175-317)||(47964936-47965078)
chr3 (184-317)||(33803282-33803415)
chr3 (184-317)||(54017846-54017979)
chr3 (184-317)||(41359795-41359924)
chr3 (178-309)||(25317161-25317292)
chr3 (186-317)||(25739457-25739588)
chr3 (184-303)||(39934985-39935104)
chr3 (186-317)||(42342420-42342551)
chr3 (186-317)||(52634671-52634801)
chr3 (193-317)||(8327899-8328023)
chr3 (196-312)||(39389070-39389186)
chr3 (194-317)||(45901708-45901832)
chr3 (193-317)||(53118014-53118137)
chr3 (194-317)||(49336727-49336850)
chr3 (194-317)||(53577359-53577482)
chr3 (180-317)||(32462584-32462722)
chr3 (184-314)||(54018228-54018358)
chr3 (196-317)||(15773187-15773308)
chr3 (187-317)||(31190012-31190134)
chr3 (180-317)||(33175685-33175827)
chr3 (193-317)||(39914247-39914371)
chr3 (186-258)||(42342122-42342194)
chr3 (213-317)||(54451235-54451339)
chr3 (198-312)||(4823655-4823769)
chr3 (193-317)||(9240144-9240268)
chr3 (186-305)||(3135105-3135224)
chr3 (205-315)||(3384317-3384427)
chr3 (180-254)||(22303685-22303759)
chr3 (188-258)||(22303989-22304059)
chr3 (196-302)||(42584864-42584970)
chr3 (193-309)||(11661954-11662071)
chr3 (196-257)||(54017590-54017651)
chr3 (194-317)||(44160585-44160707)
chr3 (203-273)||(12749208-12749278)
chr3 (220-316)||(7767380-7767476)
chr3 (202-258)||(52634994-52635050)
chr3 (215-317)||(33809069-33809171)
chr3 (276-317)||(12747874-12747915)
chr3 (188-312)||(50612481-50612610)
chr3 (193-242)||(53596030-53596079)
chr3 (193-242)||(53596345-53596394)
chr3 (193-273)||(2417356-2417436)
chr3 (186-242)||(3135486-3135542)
chr3 (193-229)||(11661603-11661639)
chr3 (200-242)||(16871005-16871047)
chr3 (200-242)||(17731950-17731992)
chr3 (200-242)||(17735037-17735079)
chr3 (200-242)||(19033181-19033223)
chr3 (200-242)||(19036306-19036348)
chr3 (193-270)||(33362334-33362409)
chr3 (200-241)||(16869843-16869884)
chr3 (246-307)||(36986040-36986101)
chr3 (246-307)||(37011479-37011540)
chr3 (193-242)||(53596545-53596594)
chr3 (204-244)||(16868433-16868473)
chr3 (192-259)||(2417742-2417809)
chr3 (193-264)||(25991451-25991522)
chr3 (193-236)||(48127641-48127684)
chr3 (200-242)||(16143508-16143550)
chr3 (242-304)||(30399662-30399724)
chr3 (186-228)||(41359523-41359565)
chr3 (216-273)||(42909763-42909820)
chr3 (280-317)||(43346645-43346682)
chr3 (193-242)||(48127854-48127903)
chr3 (280-316)||(11661531-11661567)
chr3 (280-312)||(22304246-22304278)
[»] chr6 (52 HSPs)
chr6 (175-317)||(6071127-6071269)
chr6 (132-317)||(12092460-12092645)
chr6 (132-317)||(10074341-10074526)
chr6 (186-312)||(3409259-3409385)
chr6 (189-317)||(10074026-10074154)
chr6 (194-317)||(8481922-8482044)
chr6 (184-317)||(10073646-10073777)
chr6 (186-312)||(29518503-29518629)
chr6 (186-312)||(29518920-29519046)
chr6 (186-312)||(32741179-32741305)
chr6 (187-312)||(3058226-3058351)
chr6 (186-317)||(2579904-2580035)
chr6 (176-317)||(16107673-16107814)
chr6 (186-317)||(2578475-2578605)
chr6 (188-310)||(2377756-2377878)
chr6 (175-317)||(2578856-2578997)
chr6 (188-312)||(2378126-2378250)
chr6 (180-312)||(26544049-26544181)
chr6 (176-312)||(35210204-35210340)
chr6 (184-314)||(12085064-12085193)
chr6 (202-312)||(14748386-14748496)
chr6 (194-319)||(6999836-6999961)
chr6 (184-319)||(12071721-12071856)
chr6 (186-308)||(3415462-3415584)
chr6 (184-307)||(2579522-2579645)
chr6 (186-317)||(16454570-16454701)
chr6 (186-317)||(16454902-16455033)
chr6 (128-268)||(2843598-2843739)
chr6 (176-314)||(31714669-31714804)
chr6 (193-313)||(593748-593868)
chr6 (176-312)||(1127360-1127496)
chr6 (204-307)||(32460630-32460733)
chr6 (186-312)||(1846748-1846874)
chr6 (186-312)||(3409660-3409786)
chr6 (194-317)||(10911560-10911684)
chr6 (184-310)||(5832057-5832182)
chr6 (181-319)||(9062377-9062514)
chr6 (194-309)||(1950225-1950340)
chr6 (189-317)||(33605649-33605769)
chr6 (253-316)||(33605971-33606034)
chr6 (184-317)||(2579139-2579268)
chr6 (221-317)||(16108058-16108154)
chr6 (131-273)||(30618595-30618734)
chr6 (200-242)||(22605301-22605343)
chr6 (194-315)||(5958643-5958764)
chr6 (194-242)||(11637761-11637809)
chr6 (215-294)||(5034882-5034961)
chr6 (286-317)||(7588356-7588387)
chr6 (200-242)||(21130103-21130145)
chr6 (187-220)||(10902463-10902496)
chr6 (193-233)||(11638052-11638092)
chr6 (175-311)||(34661630-34661766)
[»] chr1 (74 HSPs)
chr1 (133-317)||(19283434-19283618)
chr1 (184-317)||(26661552-26661685)
chr1 (189-317)||(17294572-17294700)
chr1 (175-325)||(1188609-1188759)
chr1 (184-317)||(5319995-5320128)
chr1 (193-317)||(22077534-22077658)
chr1 (189-317)||(34364920-34365048)
chr1 (176-317)||(34364502-34364643)
chr1 (186-317)||(66504-66635)
chr1 (175-317)||(22793273-22793416)
chr1 (190-317)||(24600350-24600477)
chr1 (184-317)||(41156986-41157119)
chr1 (186-317)||(40082402-40082532)
chr1 (186-312)||(44290856-44290983)
chr1 (194-312)||(32594756-32594874)
chr1 (184-317)||(37556106-37556239)
chr1 (184-317)||(26661928-26662061)
chr1 (184-317)||(41157370-41157503)
chr1 (187-312)||(44290491-44290616)
chr1 (184-312)||(41759483-41759611)
chr1 (194-317)||(29798194-29798317)
chr1 (194-317)||(39066240-39066363)
chr1 (184-314)||(41142370-41142501)
chr1 (194-311)||(3550721-3550838)
chr1 (186-310)||(38804387-38804511)
chr1 (184-317)||(24132018-24132148)
chr1 (193-318)||(1187403-1187528)
chr1 (176-317)||(37850622-37850763)
chr1 (176-317)||(9955902-9956045)
chr1 (218-317)||(41184489-41184588)
chr1 (194-312)||(48588528-48588646)
chr1 (186-307)||(3537631-3537752)
chr1 (184-317)||(3875361-3875494)
chr1 (176-317)||(5996894-5997034)
chr1 (184-317)||(31767191-31767324)
chr1 (184-309)||(37555733-37555857)
chr1 (187-271)||(10351201-10351285)
chr1 (206-314)||(30630690-30630798)
chr1 (196-319)||(22077871-22077993)
chr1 (194-309)||(50052063-50052178)
chr1 (184-310)||(34649440-34649566)
chr1 (203-317)||(66136-66252)
chr1 (194-270)||(14318909-14318985)
chr1 (204-317)||(22077160-22077285)
chr1 (186-317)||(44685451-44685582)
chr1 (186-316)||(45084378-45084502)
chr1 (175-317)||(45839622-45839768)
chr1 (194-316)||(11977276-11977398)
chr1 (194-268)||(44043812-44043886)
chr1 (194-312)||(45494014-45494137)
chr1 (175-313)||(50556450-50556588)
chr1 (130-249)||(32168673-32168793)
chr1 (193-306)||(5575110-5575223)
chr1 (193-317)||(24448272-24448396)
chr1 (177-312)||(47379801-47379943)
chr1 (217-271)||(12772913-12772967)
chr1 (235-312)||(3537228-3537305)
chr1 (218-263)||(41184152-41184197)
chr1 (194-230)||(11977026-11977062)
chr1 (175-271)||(30576604-30576700)
chr1 (177-241)||(47380190-47380254)
chr1 (178-270)||(4956233-4956327)
chr1 (193-230)||(12466365-12466402)
chr1 (194-270)||(5528794-5528870)
chr1 (197-257)||(35154046-35154106)
chr1 (194-242)||(50051728-50051776)
chr1 (246-317)||(4878798-4878869)
chr1 (286-317)||(35154171-35154202)
chr1 (235-317)||(21378122-21378204)
chr1 (202-252)||(30207865-30207914)
chr1 (194-239)||(9956213-9956258)
chr1 (193-230)||(31973374-31973411)
chr1 (199-251)||(30208187-30208239)
chr1 (280-312)||(50051777-50051809)
[»] chr8 (76 HSPs)
chr8 (175-317)||(4154689-4154829)
chr8 (132-312)||(3669687-3669867)
chr8 (184-317)||(34834871-34835004)
chr8 (155-317)||(4154281-4154443)
chr8 (184-317)||(3038320-3038453)
chr8 (186-317)||(5915867-5915993)
chr8 (176-270)||(18372016-18372110)
chr8 (193-317)||(9309350-9309474)
chr8 (184-316)||(34835205-34835337)
chr8 (194-318)||(45122097-45122221)
chr8 (132-317)||(9620656-9620839)
chr8 (128-319)||(5274768-5274957)
chr8 (184-317)||(41972153-41972289)
chr8 (194-317)||(9608740-9608863)
chr8 (184-319)||(40518575-40518710)
chr8 (186-312)||(3670060-3670186)
chr8 (196-314)||(45121952-45122070)
chr8 (131-312)||(30441081-30441266)
chr8 (184-317)||(33113397-33113530)
chr8 (184-317)||(40518064-40518199)
chr8 (186-309)||(147454-147577)
chr8 (176-310)||(25561837-25561972)
chr8 (194-317)||(30359266-30359389)
chr8 (184-317)||(6876892-6877026)
chr8 (184-270)||(34835517-34835603)
chr8 (184-270)||(34835783-34835869)
chr8 (184-270)||(45122666-45122752)
chr8 (204-317)||(8918814-8918927)
chr8 (196-270)||(9483229-9483303)
chr8 (213-309)||(40991756-40991852)
chr8 (131-233)||(20995393-20995495)
chr8 (187-270)||(40579539-40579622)
chr8 (186-312)||(1014277-1014403)
chr8 (180-242)||(6651564-6651626)
chr8 (184-270)||(20870603-20870689)
chr8 (184-317)||(5420646-5420779)
chr8 (194-318)||(1513955-1514079)
chr8 (186-305)||(9482636-9482755)
chr8 (194-317)||(30359604-30359727)
chr8 (184-305)||(70304-70425)
chr8 (198-310)||(37544534-37544646)
chr8 (196-317)||(9507772-9507898)
chr8 (176-286)||(40417738-40417848)
chr8 (189-242)||(6731965-6732018)
chr8 (180-249)||(32640558-32640627)
chr8 (194-242)||(147890-147938)
chr8 (196-312)||(1013913-1014029)
chr8 (193-317)||(9308972-9309101)
chr8 (250-317)||(9620384-9620451)
chr8 (194-317)||(45121696-45121818)
chr8 (184-270)||(9609127-9609213)
chr8 (255-317)||(20995502-20995564)
chr8 (235-317)||(33831973-33832055)
chr8 (194-316)||(45123002-45123124)
chr8 (229-290)||(34219208-34219269)
chr8 (193-273)||(4715315-4715395)
chr8 (176-231)||(16524446-16524501)
chr8 (176-255)||(18371683-18371761)
chr8 (186-233)||(40579301-40579348)
chr8 (199-258)||(43274824-43274883)
chr8 (178-307)||(2467507-2467634)
chr8 (184-230)||(8919174-8919220)
chr8 (162-227)||(12283957-12284023)
chr8 (235-305)||(41416252-41416322)
chr8 (213-254)||(11442911-11442952)
chr8 (184-233)||(41129067-41129116)
chr8 (196-308)||(18380059-18380171)
chr8 (198-270)||(32305519-32305591)
chr8 (286-317)||(147824-147855)
chr8 (279-322)||(18645712-18645755)
chr8 (208-308)||(18372988-18373085)
chr8 (203-308)||(43398117-43398225)
chr8 (204-241)||(12156708-12156745)
chr8 (186-271)||(27856172-27856257)
chr8 (280-312)||(6731904-6731936)
chr8 (204-270)||(18372656-18372718)
[»] chr7 (60 HSPs)
chr7 (184-317)||(7554020-7554153)
chr7 (142-317)||(7517575-7517750)
chr7 (131-317)||(1085593-1085779)
chr7 (186-312)||(37533043-37533168)
chr7 (184-317)||(30244265-30244398)
chr7 (194-317)||(30245072-30245195)
chr7 (187-317)||(34218067-34218197)
chr7 (184-317)||(8128471-8128604)
chr7 (133-273)||(15902339-15902478)
chr7 (175-319)||(36622953-36623097)
chr7 (194-317)||(23417-23540)
chr7 (186-317)||(22567071-22567201)
chr7 (194-317)||(45434631-45434754)
chr7 (172-317)||(4124106-4124251)
chr7 (193-317)||(118340-118464)
chr7 (176-312)||(29157565-29157701)
chr7 (194-317)||(16569191-16569314)
chr7 (194-317)||(16596348-16596471)
chr7 (194-317)||(22566703-22566825)
chr7 (195-310)||(6054562-6054677)
chr7 (186-305)||(11845198-11845317)
chr7 (186-317)||(24177430-24177561)
chr7 (186-309)||(37533396-37533519)
chr7 (186-317)||(40094806-40094937)
chr7 (194-319)||(9901638-9901761)
chr7 (194-271)||(30253533-30253610)
chr7 (184-317)||(45754711-45754843)
chr7 (186-317)||(45433236-45433367)
chr7 (184-270)||(19122773-19122859)
chr7 (195-312)||(14681510-14681627)
chr7 (189-314)||(36939768-36939893)
chr7 (194-319)||(40230331-40230456)
chr7 (194-317)||(43241490-43241613)
chr7 (195-317)||(36534825-36534947)
chr7 (187-309)||(20599317-20599441)
chr7 (187-317)||(37345911-37346043)
chr7 (193-310)||(47129097-47129214)
chr7 (194-317)||(1085288-1085412)
chr7 (184-270)||(24838731-24838818)
chr7 (224-317)||(28301613-28301706)
chr7 (186-249)||(37167844-37167907)
chr7 (186-268)||(30032611-30032693)
chr7 (193-242)||(21416180-21416229)
chr7 (186-231)||(47129450-47129495)
chr7 (217-317)||(41910657-41910757)
chr7 (195-242)||(23569043-23569090)
chr7 (250-315)||(10341829-10341894)
chr7 (194-266)||(28300293-28300366)
chr7 (280-317)||(30244696-30244733)
chr7 (175-242)||(21619066-21619133)
chr7 (184-229)||(28300598-28300644)
chr7 (186-224)||(37532783-37532821)
chr7 (280-312)||(14681287-14681319)
chr7 (245-317)||(30245489-30245561)
chr7 (245-317)||(30255334-30255406)
chr7 (165-241)||(37345652-37345728)
chr7 (243-317)||(36109006-36109080)
chr7 (193-242)||(21416470-21416519)
chr7 (46-90)||(23061838-23061882)
chr7 (237-273)||(42282101-42282137)
[»] chr2 (77 HSPs)
chr2 (176-317)||(33561473-33561614)
chr2 (175-317)||(30313173-30313314)
chr2 (195-317)||(30323459-30323581)
chr2 (184-317)||(962593-962726)
chr2 (164-312)||(36178614-36178763)
chr2 (193-317)||(28254276-28254400)
chr2 (175-317)||(29873558-29873700)
chr2 (193-317)||(28531353-28531477)
chr2 (186-317)||(36005912-36006042)
chr2 (194-312)||(14745707-14745825)
chr2 (186-310)||(6421387-6421511)
chr2 (153-316)||(29874021-29874185)
chr2 (180-312)||(37106188-37106320)
chr2 (186-317)||(15880258-15880389)
chr2 (187-312)||(37105924-37106049)
chr2 (184-312)||(41283505-41283633)
chr2 (194-317)||(35580764-35580886)
chr2 (186-312)||(5543030-5543156)
chr2 (184-319)||(40733510-40733645)
chr2 (194-317)||(42514644-42514767)
chr2 (186-312)||(5542657-5542783)
chr2 (204-317)||(33953821-33953934)
chr2 (194-317)||(40679669-40679792)
chr2 (184-270)||(15511525-15511611)
chr2 (186-315)||(7598225-7598354)
chr2 (187-317)||(41678401-41678532)
chr2 (184-317)||(38796648-38796783)
chr2 (184-311)||(31385738-31385865)
chr2 (195-317)||(3594219-3594341)
chr2 (184-270)||(6422152-6422238)
chr2 (189-307)||(33731653-33731771)
chr2 (131-273)||(30312828-30312971)
chr2 (204-317)||(31468800-31468909)
chr2 (194-322)||(37632637-37632765)
chr2 (184-315)||(7598606-7598729)
chr2 (187-317)||(16542444-16542574)
chr2 (184-270)||(36178201-36178287)
chr2 (200-317)||(37895107-37895224)
chr2 (186-270)||(5367497-5367581)
chr2 (175-273)||(2336663-2336761)
chr2 (180-310)||(6712978-6713109)
chr2 (186-304)||(29676543-29676655)
chr2 (175-249)||(6421794-6421868)
chr2 (194-312)||(14745334-14745452)
chr2 (193-319)||(37894731-37894857)
chr2 (184-301)||(40163402-40163520)
chr2 (186-315)||(1769889-1770018)
chr2 (194-259)||(3673121-3673186)
chr2 (194-317)||(29676898-29677026)
chr2 (205-312)||(36178320-36178427)
chr2 (184-319)||(40733876-40734010)
chr2 (186-317)||(23346230-23346362)
chr2 (224-317)||(31899496-31899589)
chr2 (217-273)||(2323655-2323710)
chr2 (205-317)||(12910223-12910335)
chr2 (193-317)||(33954301-33954424)
chr2 (193-254)||(35580477-35580540)
chr2 (194-245)||(3672768-3672819)
chr2 (176-259)||(8904481-8904564)
chr2 (280-317)||(3673080-3673117)
chr2 (184-249)||(6421689-6421754)
chr2 (176-317)||(18204406-18204547)
chr2 (207-296)||(28254165-28254254)
chr2 (206-310)||(34481268-34481372)
chr2 (194-317)||(9231244-9231367)
chr2 (196-270)||(31259658-31259732)
chr2 (184-258)||(36784290-36784364)
chr2 (235-317)||(38796299-38796381)
chr2 (193-242)||(28226407-28226456)
chr2 (280-317)||(36785689-36785726)
chr2 (194-317)||(12529068-12529191)
chr2 (196-239)||(15689441-15689484)
chr2 (286-317)||(16590883-16590914)
chr2 (193-242)||(22062833-22062882)
chr2 (276-317)||(43443104-43443145)
chr2 (193-241)||(28226726-28226773)
chr2 (235-311)||(39710188-39710264)
[»] chr4 (92 HSPs)
chr4 (184-317)||(36629232-36629365)
chr4 (150-317)||(28034224-28034392)
chr4 (184-317)||(25483331-25483464)
chr4 (129-317)||(3244424-3244612)
chr4 (184-317)||(39792888-39793021)
chr4 (155-307)||(760194-760345)
chr4 (131-314)||(23556842-23557024)
chr4 (176-282)||(15841388-15841494)
chr4 (193-317)||(52884882-52885007)
chr4 (134-317)||(15840965-15841145)
chr4 (186-317)||(52884690-52884822)
chr4 (131-309)||(34544107-34544286)
chr4 (186-317)||(44620655-44620785)
chr4 (186-312)||(50630785-50630911)
chr4 (184-317)||(22027989-22028122)
chr4 (184-317)||(39404013-39404146)
chr4 (194-317)||(34646687-34646810)
chr4 (131-317)||(36608636-36608822)
chr4 (176-317)||(4955337-4955478)
chr4 (194-312)||(49880160-49880278)
chr4 (186-317)||(2740695-2740826)
chr4 (180-311)||(16888840-16888971)
chr4 (194-317)||(50002421-50002544)
chr4 (194-312)||(55933162-55933280)
chr4 (187-317)||(10245915-10246044)
chr4 (187-317)||(22183295-22183425)
chr4 (184-270)||(45496847-45496933)
chr4 (184-317)||(1731675-1731808)
chr4 (186-317)||(3340802-3340933)
chr4 (186-317)||(54108910-54109038)
chr4 (198-317)||(3341123-3341242)
chr4 (180-311)||(16889560-16889691)
chr4 (186-317)||(36572014-36572145)
chr4 (184-315)||(54017623-54017754)
chr4 (186-317)||(22028399-22028532)
chr4 (184-258)||(23817709-23817783)
chr4 (184-317)||(39404393-39404526)
chr4 (193-270)||(54936238-54936315)
chr4 (188-312)||(41370357-41370481)
chr4 (193-317)||(41707502-41707625)
chr4 (193-317)||(54741215-54741339)
chr4 (203-314)||(2741069-2741180)
chr4 (186-317)||(32941153-32941284)
chr4 (186-321)||(34004615-34004748)
chr4 (186-270)||(44621044-44621128)
chr4 (186-317)||(4390131-4390262)
chr4 (194-314)||(49302902-49303024)
chr4 (224-317)||(11348396-11348489)
chr4 (193-258)||(31691206-31691271)
chr4 (194-270)||(18932787-18932863)
chr4 (184-303)||(44620362-44620481)
chr4 (186-317)||(49076861-49076991)
chr4 (184-270)||(54108578-54108665)
chr4 (184-309)||(50459724-50459849)
chr4 (188-302)||(54343040-54343147)
chr4 (194-317)||(20825831-20825954)
chr4 (193-242)||(11197296-11197345)
chr4 (194-306)||(20826223-20826335)
chr4 (216-311)||(7147702-7147796)
chr4 (192-258)||(3271841-3271906)
chr4 (174-268)||(23630348-23630442)
chr4 (131-313)||(11783528-11783701)
chr4 (194-267)||(43827485-43827557)
chr4 (184-317)||(3700360-3700485)
chr4 (193-257)||(10396186-10396250)
chr4 (196-240)||(11706584-11706628)
chr4 (211-311)||(41603246-41603346)
chr4 (194-317)||(43174501-43174625)
chr4 (204-317)||(54017750-54017865)
chr4 (187-317)||(6876131-6876258)
chr4 (218-317)||(49076510-49076609)
chr4 (194-317)||(51768098-51768221)
chr4 (188-226)||(45489746-45489784)
chr4 (193-266)||(2891859-2891932)
chr4 (193-242)||(10396486-10396535)
chr4 (184-249)||(19504759-19504824)
chr4 (193-270)||(48111735-48111812)
chr4 (176-233)||(50788014-50788071)
chr4 (184-220)||(43174233-43174269)
chr4 (189-312)||(6975489-6975612)
chr4 (194-285)||(31249896-31249987)
chr4 (213-268)||(31957544-31957599)
chr4 (224-258)||(9047099-9047133)
chr4 (204-266)||(18879852-18879914)
chr4 (205-242)||(1868121-1868158)
chr4 (252-317)||(12197373-12197438)
chr4 (216-273)||(29802580-29802637)
chr4 (193-230)||(34946150-34946187)
chr4 (280-317)||(44621421-44621458)
chr4 (200-233)||(51681617-51681650)
chr4 (194-242)||(922488-922536)
chr4 (193-233)||(41707278-41707318)
[»] chr5 (67 HSPs)
chr5 (186-309)||(36522269-36522392)
chr5 (130-298)||(31509745-31509913)
chr5 (192-317)||(31509618-31509744)
chr5 (186-316)||(40296347-40296477)
chr5 (176-317)||(26074168-26074309)
chr5 (176-317)||(26074607-26074748)
chr5 (193-317)||(36568606-36568730)
chr5 (186-317)||(41632777-41632908)
chr5 (177-317)||(36521919-36522059)
chr5 (186-317)||(1028549-1028680)
chr5 (186-317)||(13415792-13415923)
chr5 (186-317)||(34753057-34753188)
chr5 (186-312)||(624196-624322)
chr5 (184-310)||(18603150-18603276)
chr5 (180-317)||(15370094-15370231)
chr5 (184-317)||(36492247-36492380)
chr5 (184-312)||(27502066-27502194)
chr5 (184-319)||(35150000-35150134)
chr5 (187-317)||(299484-299614)
chr5 (186-312)||(6500451-6500576)
chr5 (194-312)||(9498694-9498812)
chr5 (180-317)||(11417003-11417138)
chr5 (184-306)||(41170640-41170762)
chr5 (184-316)||(3295045-3295176)
chr5 (201-317)||(6224191-6224307)
chr5 (186-312)||(623818-623944)
chr5 (194-312)||(6500823-6500940)
chr5 (194-300)||(33747783-33747889)
chr5 (204-312)||(32487394-32487501)
chr5 (186-317)||(12662684-12662815)
chr5 (194-309)||(25327938-25328053)
chr5 (184-270)||(26590940-26591026)
chr5 (184-317)||(3295375-3295506)
chr5 (186-307)||(38427553-38427673)
chr5 (194-317)||(26075201-26075325)
chr5 (175-317)||(26074802-26074945)
chr5 (184-255)||(36527125-36527196)
chr5 (196-317)||(42405638-42405759)
chr5 (194-268)||(15370446-15370520)
chr5 (196-309)||(2411010-2411123)
chr5 (178-317)||(9510544-9510683)
chr5 (187-262)||(32445935-32446010)
chr5 (186-312)||(5723823-5723949)
chr5 (196-317)||(24489248-24489367)
chr5 (193-242)||(13042609-13042658)
chr5 (184-312)||(29549285-29549413)
chr5 (184-233)||(301030-301079)
chr5 (155-309)||(3622890-3623035)
chr5 (187-271)||(19275570-19275653)
chr5 (186-226)||(26900049-26900089)
chr5 (217-317)||(42508607-42508707)
chr5 (193-232)||(13042784-13042823)
chr5 (193-232)||(13112782-13112821)
chr5 (235-310)||(26074320-26074395)
chr5 (186-228)||(795264-795306)
chr5 (193-242)||(13112607-13112656)
chr5 (200-241)||(34103625-34103666)
chr5 (193-242)||(36389015-36389064)
chr5 (193-269)||(13786040-13786116)
chr5 (286-317)||(35150742-35150773)
chr5 (286-317)||(35151033-35151064)
chr5 (200-230)||(5963765-5963795)
chr5 (200-242)||(41341525-41341567)
chr5 (193-311)||(10351210-10351330)
chr5 (276-317)||(36527205-36527246)
chr5 (200-241)||(41340350-41340391)
chr5 (196-268)||(41635233-41635305)
[»] scaffold0078 (2 HSPs)
scaffold0078 (194-317)||(5352-5475)
scaffold0078 (176-317)||(4977-5118)
[»] scaffold0702 (2 HSPs)
scaffold0702 (188-310)||(548-670)
scaffold0702 (235-312)||(224-300)
[»] scaffold0391 (3 HSPs)
scaffold0391 (194-317)||(1146-1269)
scaffold0391 (193-265)||(1730-1802)
scaffold0391 (280-317)||(3111-3148)
[»] scaffold0113 (2 HSPs)
scaffold0113 (131-317)||(39452-39635)
scaffold0113 (178-317)||(39833-39972)
[»] scaffold0734 (2 HSPs)
scaffold0734 (186-317)||(5391-5523)
scaffold0734 (196-317)||(5772-5898)
[»] scaffold0171 (1 HSPs)
scaffold0171 (196-317)||(17496-17619)
[»] scaffold0027 (1 HSPs)
scaffold0027 (188-316)||(47356-47484)
[»] scaffold0807 (1 HSPs)
scaffold0807 (218-273)||(3117-3172)
[»] scaffold0088 (1 HSPs)
scaffold0088 (218-263)||(10192-10237)
[»] scaffold0504 (1 HSPs)
scaffold0504 (235-310)||(10192-10267)


Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 39335831 - 39336088
Alignment:
Q  15 tcattattctgtgcagtcttgcatgagctccatatcatggtccctatagaccttatgcaaagagtcacttgtaacacatcttaagttaagccttaaaaca 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39335831 tcattattttgtgcagtcttgcatgagctccatatcatggtccctatagaccttatgcaaagagtcacttgtaacacatcttaagttaagccttaaaaca 39335930  T
Q  115 aatgagaacacgtttttgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttac 214  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39335931 aatgagaacacgtttttgttggttcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttac 39336030  T
Q  215 ccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcc 272  Q
    |||||||||||||||||||| ||||||  || | ||| ||||||||||||||||||||    
T  39336031 ccaaaaccttaaggcaatgattttatgagtcttatcatttataaagtgttcaacctcc 39336088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 131 - 343
Target Start/End: Original strand, 39336208 - 39336418
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||| |||||||||||| |||||||||| | |||||| |||||||||||| ||||| |||||||||| ||  ||||| ||| |||||||||||| |||    
T  39336208 tgttggatcacgaggggagccaagggggaccatccacatccaggcagagcaaccacacgagcgagagaggca--acactattatccaaaaccttaaagca 39336305  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaatagtttttacatg 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39336306 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcacacaatagtttttacatg 39336405  T
Q  331 gcagacttgatct 343  Q
    ||||| |||||||    
T  39336406 gcagatttgatct 39336418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 47964541 - 47964681
Alignment:
Q  177 gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact 276  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||||||| || ||||||||||||  |    
T  47964541 gagcaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacat 47964640  T
Q  277 ttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  47964641 ttctatccgatgcgggacatacaactcacacttgcacacaa 47964681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 37990665 - 37990802
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||| |  |   ||     
T  37990665 caatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattt 37990764  T
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||| |||||||||||||||||| ||||||    
T  37990765 tatccgatgtggaacatataactcacacttgtacacaa 37990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 46546375 - 46546488
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||  |||| ||||||||| |||||||||||||    
T  46546375 cacactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacctccacatttcaatccaatgtaggacatataactc 46546474  T
Q  304 acacttgcacacaa 317  Q
    |||||| |||||||    
T  46546475 acacttacacacaa 46546488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 12114602 - 12114725
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||| |||||||||||  |  ||||||||| ||||||||    
T  12114602 agagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtggga 12114701  T
Q  294 catataactcacacttgcacacaa 317  Q
     |||||||| ||||||||||||||    
T  12114702 tatataacttacacttgcacacaa 12114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 43346823 - 43346954
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| |||||||||||  |   || ||||      
T  43346823 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctg 43346922  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  43346923 atgtgggacatataactcacacttgtacacaa 43346954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 37991007 - 37991140
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||| |||||||||||  |   || ||||    
T  37991007 cacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatc 37991106  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||| ||||||||||||||||||| ||||||    
T  37991107 caatgtgagacatataactcacacttgtacacaa 37991140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 21832395 - 21832503
Alignment:
Q  206 cactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcac 305  Q
    |||||||||||||||||||||||| |||||||||||  |||||| |||||||| |||||||||||  |  ||||||||||||||||||||||||||||||    
T  21832395 cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcac 21832494  T
Q  306 acttgcaca 314  Q
    |||||||||    
T  21832495 acttgcaca 21832503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 15772982 - 15772851
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||| ||||||||| |  |   || ||||    
T  15772982 cacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatc 15772883  T
Q  284 caatgtgggacatataactcacacttgcacac 315  Q
    | || |||||||||||||||||||||||||||    
T  15772882 cgatatgggacatataactcacacttgcacac 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 35946648 - 35946517
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| | |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  35946648 cacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccg 35946549  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  35946548 atgtgggacatataactcacacttgtacacaa 35946517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 22304695 - 22304569
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| || ||||||||  |   || |||||     
T  22304695 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccg 22304596  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||| ||||||||||||    
T  22304595 atgtgggacatatagctcacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 32462932 - 32463064
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact-ttctatcc 284  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||  || ||| |||||||| || ||||||||   ||| ||||||||    
T  32462932 cacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatcc 32463031  T
Q  285 aatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||||||||||||||||||| ||||||    
T  32463032 gatgtgggacatataactcacacttgtacacaa 32463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 32589831 - 32589699
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  32589831 cacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatc 32589732  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||||||||| ||||||||||||||||||    
T  32589731 ttatgtgggacatat-actcacacttgcacacaa 32589699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 45395675 - 45395816
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | |||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||| ||||| |||||  |      
T  45395675 agagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttact 45395774  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     || ||| | |||||||| |||||||| ||||||||||||||    
T  45395775 cttttattcgatgtgggatatataacttacacttgcacacaa 45395816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 1634353 - 1634477
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacc-tccaactttctatccaatgtgg 291  Q
    |||||||| ||| |||||||||||||||||||||| ||||| |||||||| |||||| |||||||| ||||| |||| |  |  ||||||||| ||||||    
T  1634353 gagagagataccgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgg 1634452  T
Q  292 gacatataactcacacttgcacaca 316  Q
    |||||||||||||||||||||||||    
T  1634453 gacatataactcacacttgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 29644616 - 29644744
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||| |||||||| | |||| |||||||| |||||||||||  |   ||  |||| |||    
T  29644616 aagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatg 29644715  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||||||    
T  29644716 tgggacatataactcacacttgcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 29644937 - 29645065
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||| ||||| |||||  |   || ||||| |||    
T  29644937 aagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatg 29645036  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||| ||||||||||||||    
T  29645037 tgggacatataacttacacttgcacacaa 29645065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 47964936 - 47965078
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||| | |||||   ||||||||||||| | |||| ||||||||     
T  47964936 cagaacaatcatataagtgagagagacgccacactcttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccac 47965035  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||| ||||   |||||||||||||||||||||||||    
T  47965036 ttttctatccgatgtaaaacatataactcacacttgcacacaa 47965078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 33803282 - 33803415
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||| |||||| |||||||| |||||| |||||||  |||||||||||  |   || ||||    
T  33803282 cacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatc 33803381  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||| ||||||||||    
T  33803382 cgatgtgggacatataactcacaattgcacacaa 33803415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 54017846 - 54017979
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  |  |||||||  |||||| |||||||| |||||||||||  |   || ||||    
T  54017846 cacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatc 54017945  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||| |||||||||||||||||||||||||||    
T  54017946 cgatgtaggacatataactcacacttgcacacaa 54017979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 41359795 - 41359924
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||| || ||||||||  |   || ||||    
T  41359795 cacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatc 41359894  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||||||    |||||||||||||||||||||    
T  41359895 cgatgtggg----ataactcacacttgcacacaa 41359924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 25317292 - 25317161
Alignment:
Q  178 agcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactt 277  Q
    ||||| |||||||| |||||| |||| ||||| |||||||||||||||||||||  ||||||||| |||||||| ||| |||||| ||||||||||  ||    
T  25317292 agcaaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaacaagtttatgggtcctctcagttacaaagtgctcaacctccacttt 25317193  T
Q  278 tctatccaatgtgggacatataactcacactt 309  Q
    || |||   ||||||||| |||||||||||||    
T  25317192 tccatctggtgtgggacacataactcacactt 25317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 25739457 - 25739588
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||||||||||||||| |||||| |||||||   |||||||| |  |   || |||||     
T  25739457 cacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccg 25739556  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  25739557 atgtgggacatataactcacacttgcacacaa 25739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 39934985 - 39935104
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||  |   || ||||    
T  39934985 cacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatc 39935084  T
Q  284 caatgtgggacatataactc 303  Q
    | |||| |||||||||||||    
T  39935085 cgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 42342420 - 42342551
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||  |||||||||||||||||||||||| |||||  ||||||| |||||| |||||||| ||||| |||||  |   || ||||      
T  42342420 cacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcgg 42342519  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  42342520 atgtgggacatataactcacacttgcacacaa 42342551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 52634801 - 52634671
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||| | |||| |||||||| | |||||||||  |   || |||||     
T  52634801 cacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggt-ctcttacttataaggcgttcaacctttactgttttatccg 52634703  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  52634702 atgtgggacatataactcacacttgtacacaa 52634671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 8328023 - 8327899
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||| | |||| ||||||||  | |||| |||  |   || ||||| |||||||    
T  8328023 gagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtggg 8327924  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  8327923 acatataactcacacttgcacacaa 8327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 39389186 - 39389070
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| |||||| | || ||| |||||||||||  |   || ||||| |||| |||||    
T  39389186 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggaca 39389087  T
Q  296 tataactcacacttgca 312  Q
    |||||||||||||||||    
T  39389086 tataactcacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 45901832 - 45901708
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact-ttctatccaatgtggg 292  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||||  |||||| |||||||| |||||||||||     | || ||||| |||||||    
T  45901832 agagagacaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtggg 45901733  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||| ||||||    
T  45901732 acatataactcacacttgtacacaa 45901708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 53118014 - 53118137
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||| || |||||||||||||||| |||||||||||  |   || ||||| || |||     
T  53118014 gagagagacactacactcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatgga 53118112  T
Q  293 acatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| |||||    
T  53118113 acatataactcacacttgcccacaa 53118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 49336727 - 49336850
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||| ||| ||||| | ||| |||||||| |||||| |||||||| ||| |||||||  |  ||||||||| ||||| ||    
T  49336727 agagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgaga 49336826  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||| ||||||||||||| ||||||    
T  49336827 catgtaactcacacttgtacacaa 49336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 53577482 - 53577359
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||| || | || |||  ||||||||||  |   || ||||| ||||| ||    
T  53577482 agagagacaccacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtga 53577383  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  53577382 catataactcacacttgcacacaa 53577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 32462584 - 32462722
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact-tt 278  Q
    ||||| ||||| | |||||||| ||||||||||| |||||||||||| |||||  ||||||||||| ||| |||||||| |||||||||||   ||| ||    
T  32462584 caatcccacaaacaagagagaccccacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctt 32462683  T
Q  279 ctatccaatgtgggacatataactcacacttgcacacaa 317  Q
      || | ||||||||||||||||||||||||| ||||||    
T  32462684 tcattcgatgtgggacatataactcacacttgtacacaa 32462722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 54018228 - 54018358
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||||  |||||||||||||||||||||||||||||||||||  |  |||||||| |||||| |||||||| |||||||| ||  |   || ||||    
T  54018228 cacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatc 54018327  T
Q  284 caatgtgggacatataactcacacttgcaca 314  Q
    | |||  ||||||||||||||||||||||||    
T  54018328 cgatgcaggacatataactcacacttgcaca 54018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 15773308 - 15773187
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||  |||||| ||||||||  |||||||| |  |   || ||| | ||||||||||    
T  15773308 agagacatcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggaca 15773209  T
Q  296 tataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||    
T  15773208 tataactcacacttgcacacaa 15773187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 31190134 - 31190012
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| ||||||||||||||||||||||||||||||||||||        ||||| |||||| |||||||| |||||||||||  |   || ||||| |    
T  31190134 acaagcaagagagacaccacactcttacccaaaaccttaaggc--------tatgggtcctctaacttataaggtgttcaacctttactcttttatccga 31190043  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||| ||||||||||||||||||    
T  31190042 tgtgggacatatcactcacacttgcacacaa 31190012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 33175685 - 33175827
Alignment:
Q  180 caatcacacaagcgagagagacaccaca--ctcttacccaaaaccttaaggcaatgagt---ttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||||||| |||||||||  ||||  |||||||||||||||||||||| ||||||   |||||| | |||| |||||||| |||||||||||  |     
T  33175685 caatcacacaagtgagagagacgtcacacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttac 33175784  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||  ||||| ||||||||||||||||||| ||||||    
T  33175785 ttttctatctgatgtgagacatataactcacacttgtacacaa 33175827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 39914371 - 39914247
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||||||||||||||| ||||||  |||||||| |  |||||||| |||||| | |||||| |||||||||||| |   || ||||  ||||| |    
T  39914371 gagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgag 39914272  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  39914271 acatataactcacacttgcacacaa 39914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 42342122 - 42342194
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  42342122 cacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataa 42342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 54451235 - 54451339
Alignment:
Q  213 acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    ||||||||||||||| |||| ||| |||||||| ||||||| |||||||||||||||||||  ||||| |   |||||||||||||||||||||  ||||    
T  54451235 acccaaaaccttaagacaataagtatatggatcatctcactcataaagtgttcaacctccatttttctttttgatgtgggacatataactcacatatgca 54451334  T
Q  313 cacaa 317  Q
    |||||    
T  54451335 cacaa 54451339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 4823769 - 4823655
Alignment:
Q  198 agacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacata 297  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||| ||||| ||| |  |   || ||||| ||||| ||| ||    
T  4823769 agacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagactta 4823670  T
Q  298 taactcacacttgca 312  Q
    |||||||||||||||    
T  4823669 taactcacacttgca 4823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 9240268 - 9240144
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||||||||| ||||| || ||| ||||||| ||||  ||||||| |||||| |||||||| ||||||| | |  |  | ||||||| ||||||     
T  9240268 gagagagacaccacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtgga 9240169  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  9240168 acatataactcacacttgcacacaa 9240144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 305
Target Start/End: Original strand, 3135105 - 3135224
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||| || |||||||| | || | |||||||| ||||||||| |  |   || |||||     
T  3135105 cacaagcaagagagacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccg 3135204  T
Q  286 atgtgggacatataactcac 305  Q
    ||||||||||||||||||||    
T  3135205 atgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 315
Target Start/End: Original strand, 3384317 - 3384427
Alignment:
Q  205 acactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactca 304  Q
    ||||||||||||||||| |||||||| | ||||||||| ||||||  ||||||||||||| |||||  |   || ||||  |||||||||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactca 3384416  T
Q  305 cacttgcacac 315  Q
    | |||||||||    
T  3384417 cgcttgcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 22303685 - 22303759
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcactt 254  Q
    ||||| ||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  22303685 caatcgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22303989 - 22304059
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||| || ||||||||    
T  22303989 caagcaagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataa 22304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 42584864 - 42584970
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    ||||||||||||||||| | ||||| |||||| ||||  ||||||||||||||| |||||||| |||||||| ||  |   |||||||| ||||||||||    
T  42584864 agagacaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggaca 42584963  T
Q  296 tataact 302  Q
    |||||||    
T  42584964 tataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 11662071 - 11661954
Alignment:
Q  193 gagagagacaccacactcttacccaaaa-ccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgg 291  Q
    |||||||||||| ||||||||||||||| ||||||||||||  |||||||   |||||||||| ||| |||||||||||  |   || ||||||||||||    
T  11662071 gagagagacacctcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtgg 11661972  T
Q  292 gacatataactcacactt 309  Q
    | ||| ||||||||||||    
T  11661971 ggcatttaactcacactt 11661954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 54017590 - 54017651
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttata 257  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||    
T  54017590 agagacaccacactcttacccaaaaccttaaggcaatgggtttatggattccctctcttata 54017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 44160585 - 44160707
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||||| | |||||| |||||||||||  |   || |||||||| ||  |    
T  44160585 agagagacgccacattcttacc-aaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaa 44160683  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||| ||||||||| ||||    
T  44160684 catataactgacacttgcatacaa 44160707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 12749278 - 12749208
Alignment:
Q  203 ccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    ||||||||||| | |||||||||| |||||  |||||||| ||||| ||||||||||||||||||||||||    
T  12749278 ccacactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacctcca 12749208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 7767380 - 7767476
Alignment:
Q  220 accttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacaca 316  Q
    |||||||| ||||| |||||||  |||||| | ||||||||||| ||||||  |  ||||||||| ||||||||||||||||||| |||| ||||||    
T  7767380 accttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 52635050 - 52634994
Alignment:
Q  202 accacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  52635050 accacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataa 52634994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 33809069 - 33809171
Alignment:
Q  215 ccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcaca 314  Q
    ||||||||||||| ||| ||||||||   |  ||| ||| |||||||||||||  | ||| ||||||||  ||||||||||||||||| |||||||||||    
T  33809069 ccaaaaccttaagacaacgagtttattagttttcttactcataaagtgttcaatatgcaattttctatctgatgtgggacatataacttacacttgcaca 33809168  T
Q  315 caa 317  Q
    |||    
T  33809169 caa 33809171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 12747874 - 12747915
Alignment:
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  12747874 tttctatccgatgtgggacatataactcacacttgcacacaa 12747915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 50612481 - 50612610
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgag-----tttatggatcctctcacttataaagtgttcaacctccaactttctat 282  Q
    ||||| ||||||||| ||||||||||||||||||||||||  |||  |     ||||||  |||||| |||||||| |||||||| ||  |   || |||    
T  50612481 caagcaagagagacatcacactcttacccaaaaccttaagataatatgttagatttatgagtcctcttacttataaggtgttcaatctttactattttat 50612580  T
Q  283 ccaatgtgggacatataactcacacttgca 312  Q
    || |||||||||||||||||||||||||||    
T  50612581 ccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 53596079 - 53596030
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||    
T  53596079 gagagagacaccacactcttacccaaaaccttaaggtaacgggtttatgg 53596030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 53596394 - 53596345
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||    
T  53596394 gagagagacaccacactcttacccaaaaccttaaggtaacgggtttatgg 53596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 2417436 - 2417356
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||||| ||||| || | | |||||||||||| ||| ||||||||| ||| |||||||||||||| ||||||| |||||    
T  2417436 gagagagaaaccacgctttaatccaaaaccttaaagcattgagtttatagattctctcacttataaaatgttcaatctcca 2417356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 3135486 - 3135542
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||| | |||||||||||||||||| | ||||||||||||||||| ||||||||    
T  3135486 cacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggtttatgg 3135542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 11661639 - 11661603
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggc 229  Q
    |||||||||||||||||||||||||||||||||||||    
T  11661639 gagagagacaccacactcttacccaaaaccttaaggc 11661603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 16871005 - 16871047
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  16871005 acacgacactcttacctaaaaccttaaggcaatgagtttatgg 16871047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 17731950 - 17731992
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  17731950 acaccacactcttactcaaaaccttaaggcaatgggtttatgg 17731992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 17735037 - 17735079
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  17735037 acaccgcactcttacccaaaaccttaagtcaatgagtttatgg 17735079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 19033181 - 19033223
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  19033181 acaccacactcttactcaaaaccttaaggcaatgggtttatgg 19033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 19036306 - 19036348
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  19036306 acaccgcactcttacccaaaaccttaagtcaatgagtttatgg 19036348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 33362334 - 33362409
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||||  ||||||||| ||||||| |||| |||||||| |||||| |||||||| || ||||||||    
T  33362334 gagagagacgccacact--tacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacct 33362409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 16869843 - 16869884
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  16869843 acaccacactcttgctcaaaaccttaaggcaatgagtttatg 16869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 36986040 - 36986101
Alignment:
Q  246 ctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacac 307  Q
    ||||||||||||||||  ||||||| ||  ||||||| | ||||||||||||||||||||||    
T  36986040 ctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 37011479 - 37011540
Alignment:
Q  246 ctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacac 307  Q
    ||||||||||||||||  ||||||| ||  ||||||| | ||||||||||||||||||||||    
T  37011479 ctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 53596594 - 53596545
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||||||||||| |||| |||||| ||||| ||||||||    
T  53596594 gagagagacaccacactcttacctaaaatcttaagtcaatgggtttatgg 53596545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 16868433 - 16868473
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggat 244  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  16868433 cacactcttatccaaaatcttaaggcaatgagtttatggat 16868473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 2417809 - 2417742
Alignment:
Q  192 cgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaa 259  Q
    |||||||||||||||| | | | |||||||  ||| ||| ||||||||| ||||||||||||||||||    
T  2417809 cgagagagacaccacaatttaatccaaaactctaaagcattgagtttatagatcctctcacttataaa 2417742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 25991522 - 25991451
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgtt 264  Q
    |||||||| |||||||| | |||||||||||||||||| |  |||||| | | |||||||||||||| ||||    
T  25991522 gagagagagaccacactttaacccaaaaccttaaggcattaggtttataggttctctcacttataaaatgtt 25991451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 48127641 - 48127684
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagt 236  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||    
T  48127641 gagagagacaccacacacttacccaaaatcttaaggtaatgagt 48127684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 16143550 - 16143508
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||    
T  16143550 acactacactcttacccaaaactttaaggcaatgagcttatgg 16143508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 30399662 - 30399724
Alignment:
Q  242 gatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactca 304  Q
    |||||||||||||||||| |||||||||||||| ||| ||  |||||||| || | |||||||    
T  30399662 gatcctctcacttataaaatgttcaacctccaattttttaaacaatgtggaacttctaactca 30399724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 41359523 - 41359565
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaagg 228  Q
    ||||||| | |||||| ||||||||||||||||||||||||||    
T  41359523 cacaagcaaaagagacgccacactcttacccaaaaccttaagg 41359565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 42909820 - 42909763
Alignment:
Q  216 caaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    ||||| |||||| ||||||||||||||||||||| || ||||||  ||||| ||||||    
T  42909820 caaaatcttaagacaatgagtttatggatcctctaacctataaaacgttcagcctcca 42909763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 43346682 - 43346645
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  43346682 tatccgatgtgggacatacaactcacacttgcacacaa 43346645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 48127854 - 48127903
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||| |||||||||||||||| ||||||| |||| |||||| ||||||||    
T  48127854 gagaaagacaccacactcttatccaaaacattaaagcaatgggtttatgg 48127903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 11661567 - 11661531
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacaca 316  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  11661567 tatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 22304278 - 22304246
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||||||||    
T  22304278 tatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 6071269 - 6071127
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| || ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  6071269 cagagcaaccatacaagcgagagagacgccacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccac 6071170  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||| ||||||||||||||||||||||||||||||||||    
T  6071169 ttttctattcaatgtgggacatataactcacacttgcacacaa 6071127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 132 - 317
Target Start/End: Original strand, 12092460 - 12092645
Alignment:
Q  132 gttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||| ||||||||| | ||||||| || |||||||| ||||| ||||||| | |||||| ||||||||||||||| |||||| |||||||||||||||    
T  12092460 gttgggacacgaggggggccaagggg-accacccacatccaggccagagcaacctcacaagtgagagagacaccacagtcttactcaaaaccttaaggca 12092558  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||| |||| ||| |||||||||||    
T  12092559 atgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccgatgtgggacatctaacacacccttgcacacaa 12092645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 132 - 317
Target Start/End: Original strand, 10074341 - 10074526
Alignment:
Q  132 gttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||| ||||||| |  ||||||||| ||||||  |||| ||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  10074341 gttgggtcacaaggggagcct-gggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggca 10074439  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||| |||||| |||||||| |||||||||||  |  ||||||||| ||||||||| | ||||||||||||||||||||    
T  10074440 atgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcacacttgcacacaa 10074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 3409385 - 3409259
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||  |   || ||||      
T  3409385 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctg 3409286  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  3409285 atgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 10074026 - 10074154
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||| |  |  ||||||||| |||    
T  10074026 aagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatg 10074125  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    ||||| ||||||||||| |||||||||||    
T  10074126 tgggatatataactcacccttgcacacaa 10074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 8482044 - 8481922
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  || ||||| |||||||||||||||||||||  ||| ||||  |||| |||    
T  8482044 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgt-gga 8481946  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  8481945 catataactcacacttgcacacaa 8481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 10073646 - 10073777
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||  |  ||||  ||    
T  10073646 cacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttacttttc--tc 10073743  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||| ||||||||||||||    
T  10073744 cgatgtgggacatataactaacacttgcacacaa 10073777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 29518629 - 29518503
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  29518629 cacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccg 29518530  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  29518529 atgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 29519046 - 29518920
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  29519046 cacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccg 29518947  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  29518946 atgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 32741305 - 32741179
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  32741305 cacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccg 32741206  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  32741205 atgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 3058351 - 3058226
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||  |   || ||||| |    
T  3058351 acaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccga 3058252  T
Q  287 tgtgggacatataactcacacttgca 312  Q
    |||||||||||||||| |||||||||    
T  3058251 tgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 2579904 - 2580035
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  || |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  2579904 cacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccg 2580003  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  2580004 atgtgggacatataactcacacttgcacacaa 2580035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 16107814 - 16107673
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||| ||||| |||||  |      
T  16107814 agagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttact 16107715  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||| ||||| |||||  |||||||||||||||||| ||||||    
T  16107714 tttttatccgatgtgacacatataactcacacttgtacacaa 16107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 2578475 - 2578605
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| | |||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||||  |   || |||||     
T  2578475 cacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatcc- 2578573  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
     |||||||||||||||||||||||| ||||||    
T  2578574 gtgtgggacatataactcacacttgtacacaa 2578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 310
Target Start/End: Complemental strand, 2377878 - 2377756
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || || || ||    
T  2377878 caagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgat 2377779  T
Q  288 gtgggacatataactcacacttg 310  Q
    |||||||||||||||||||||||    
T  2377778 gtgggacatataactcacacttg 2377756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 2578856 - 2578997
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||| ||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| || |||||| |   |    
T  2578856 cagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacat-tta 2578954  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||| ||||| ||| ||||||||||| |||||||||| |||||    
T  2578955 ctttttatccgatgagggacatataaatcacacttgctcacaa 2578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 2378250 - 2378126
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| |||||||||||||| ||||||| |||||||||||| |||| |||||||| |||||| |||||||| |||||||||||  |   || ||||| ||    
T  2378250 caagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgat 2378151  T
Q  288 gtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||    
T  2378150 gtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 26544181 - 26544049
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||  || |||||||| |||||| |||||||| |||||||||||  |   ||     
T  26544181 caatcgcacaagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattt 26544082  T
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||||||||    
T  26544081 tatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 35210340 - 35210204
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||||||  |      
T  35210340 agagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttact 35210241  T
Q  276 tttctatccaatgtgggacatataactcacacttgca 312  Q
     || ||||| ||||| |||||||||||||||||||||    
T  35210240 attttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 12085064 - 12085193
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||  ||||||  |||| ||  ||||||||||||||| |||| ||||||||||    
T  12085064 cacacaagtgagagagacgccacactcttacccaaaaccttaaggccatggttttatgagtcctttctattataaagtgttcaaactcc-actttctatc 12085162  T
Q  284 caatgtgggacatataactcacacttgcaca 314  Q
      |||  ||||||||||||||||||||||||    
T  12085163 tgatgcaggacatataactcacacttgcaca 12085193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 14748386 - 14748496
Alignment:
Q  202 accacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataac 301  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| | |||||| |||||||||||  |   || ||||| ||||||||||||||||    
T  14748386 accacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataac 14748485  T
Q  302 tcacacttgca 312  Q
    |||||||||||    
T  14748486 tcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 6999836 - 6999961
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| || ||||| ||||||||| |  |  ||| ||||| |||| |||    
T  6999836 agagagacgccacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtagga 6999935  T
Q  294 catataactcacacttgcacacaata 319  Q
    ||||||||||||||||  ||||||||    
T  6999936 catataactcacacttatacacaata 6999961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 12071721 - 12071856
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||  ||  |||||||  |||| ||  ||||||||||||||| |||||  ||||||||    
T  12071721 cacacaagtgagagagacgccacactcttacccaaaaccttaaggtcataggtttatgagtcctttctattataaagtgttcaaactccatttttctatc 12071820  T
Q  284 caatgtgggacatataactcacacttgcacacaata 319  Q
      ||| | ||||||||||||||||||||||| ||||    
T  12071821 tgatgcgagacatataactcacacttgcacaaaata 12071856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 3415584 - 3415462
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||  |||||||||||  |   || |||       
T  3415584 cacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtg 3415485  T
Q  286 atgtgggacatataactcacact 308  Q
    |||||||||||||||||||||||    
T  3415484 atgtgggacatataactcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 2579522 - 2579645
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||| |||||||| || | | ||||  |  ||| | ||    
T  2579522 cacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtc 2579621  T
Q  284 caatgtgggacatataactcacac 307  Q
    | ||||||||||||||||||||||    
T  2579622 cgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 16454701 - 16454570
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||| |||||||| ||||||||| |  |   || ||||      
T  16454701 cacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctg 16454602  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||| |||||||||||||| ||||||    
T  16454601 atgtgggacacataactcacacttgtacacaa 16454570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 16455033 - 16454902
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||| |||| | |||||||| |||||||||||  |   || ||||      
T  16455033 cacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctg 16454934  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||| |||||||||| ||| ||||||    
T  16454933 atgtgggacacataactcacatttgtacacaa 16454902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 268
Target Start/End: Complemental strand, 2843739 - 2843598
Alignment:
Q  128 ttttgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaa 226  Q
    ||||||||| ||| ||||||||| | |||||||   ||||||  |||| ||| ||| ||| ||||| ||||||| |||||||||||||||||||||||||    
T  2843739 ttttgttggatcatgaggggagtta-gggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaa 2843641  T
Q  227 ggcaatgagtttat-ggatcctctcacttataaagtgttcaac 268  Q
    |||||||||||||| || |||||| |||||||| |||||||||    
T  2843640 ggcaatgagtttatggggtcctcttacttataaggtgttcaac 2843598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 31714804 - 31714669
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| ||||||||||| | | || |||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |  ||||||||||||      
T  31714804 agagcaaccacacaagcgaaaaa-acgccacactcttactcaaaaccttaaggcaatgagttaatgggtcctctca-ttatataacgttcaacctccact 31714707  T
Q  276 tttctatccaatgtgggacatataactcacacttgcaca 314  Q
    ||||||||| |||| |||||||| | |||||||||||||    
T  31714706 tttctatccgatgtaggacatat-agtcacacttgcaca 31714669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 593748 - 593868
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||| |||||||| |||||||||||||||||||| |  |||||||  |||||| |||||||| |||||||||||  |   || ||||| |||||||    
T  593748 gagagagataccacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtggg 593847  T
Q  293 acatataactcacacttgcac 313  Q
    ||||| |||||||||||||||    
T  593848 acatacaactcacacttgcac 593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 1127496 - 1127360
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| |||| |||  |||||||| |||||||||||||||||||||||||| |||| |||||||  |||||| |||||||| |||||||||||  |      
T  1127496 agagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttact 1127397  T
Q  276 tttctatccaatgtgggacatataactcacacttgca 312  Q
     || || || |||||||| |||||||||||| |||||    
T  1127396 attttacccgatgtgggatatataactcacagttgca 1127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 32460630 - 32460733
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    |||||||||||||||||||||||||||||| |||||||  |||||| |||||||| |||||||||||  |   || ||| | ||||||||||||||||||    
T  32460630 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactc 32460729  T
Q  304 acac 307  Q
    ||||    
T  32460730 acac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 1846874 - 1846748
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||  ||||||| | |||| |||||||| |||||||||||  |   || |||||     
T  1846874 cacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccg 1846775  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    ||||| |||||| || |||||||||||    
T  1846774 atgtgagacatagaattcacacttgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 3409786 - 3409660
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||  | ||||||||| |||||||| |||||| ||||||||  |||||||| |  |   || ||||      
T  3409786 cacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctg 3409687  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||| ||||||||||||||||||||    
T  3409686 atgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 10911684 - 10911560
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca-actttctatccaatgtggg 292  Q
    ||||||||| ||||||||||  |||||| |||||||||||||||||||  |||||| |||||||| |||||||||||  |   ||| ||||  |||| ||    
T  10911684 agagagacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtagg 10911585  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||| ||||    
T  10911584 acatataactcacacttgcatacaa 10911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 5832057 - 5832182
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||  |||||||||||||||| |||||||||| |||||||   ||  ||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  5832057 cacacaagtaagagagacaccacacttttacccaaaatcttaagggg-tggctttatgggtcctcttacttataaggtgttcaacctttactcttttatc 5832155  T
Q  284 caatgtgggacatataactcacacttg 310  Q
    ||||||||||||||||||| |||||||    
T  5832156 caatgtgggacatataacttacacttg 5832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 9062377 - 9062514
Alignment:
Q  181 aatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttct 280  Q
    ||||| |||||  ||||||| |||||||| ||||||||||| ||||| |||||||||||||  |||||| ||||||||  ||||||||||  |   || |    
T  9062377 aatcaaacaagtaagagagataccacacttttacccaaaac-ttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactatttt 9062475  T
Q  281 atccaatgtgggacatataactcacacttgcacacaata 319  Q
    |||| ||||||||||||||||||||| ||  ||||||||    
T  9062476 atccgatgtgggacatataactcacatttatacacaata 9062514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 1950225 - 1950340
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||  ||||||||||| ||||||||||||||| |   ||||||| |||||| |||| ||| |||||||||||  |   || ||||| ||||||||    
T  1950225 agagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtggga 1950324  T
Q  294 catataactcacactt 309  Q
    ||||||||||||||||    
T  1950325 catataactcacactt 1950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 33605769 - 33605649
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||||||||||| ||||||| |||||||||||| |||||| |||  || |        ||||| |||||||||||||||||||||  ||||||||  |||    
T  33605769 aagcgagagagataccacacacttacccaaaactttaaggaaataggtct--------tctcaattataaagtgttcaacctccacttttctatctgatg 33605678  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    || |||||||| |||||||||||||||||    
T  33605677 tgagacatatagctcacacttgcacacaa 33605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 33606034 - 33605971
Alignment:
Q  253 ttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacaca 316  Q
    |||||||||||||||||||||  ||||||| | ||||||||||||||||| ||| |||||||||    
T  33606034 ttataaagtgttcaacctccacttttctattcgatgtgggacatataacttacatttgcacaca 33605971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 2579139 - 2579268
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||| |  ||| |||||||| ||||    ||||||| ||||||||| |  |   || ||||    
T  2579139 cacacgagcaagagagacaccacactcttagccaaagccttaaagttatgggtttatggttcct----cttataaggtgttcaacttttactcttttatc 2579234  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||| ||||||| ||||||    
T  2579235 cgatgtgggacatataactaacacttgtacacaa 2579268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 16108154 - 16108058
Alignment:
Q  221 ccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||||| |  |   || ||||  |||||| |||||||||||||||||| ||||||    
T  16108154 ccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaa 16108058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 30618595 - 30618734
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggca-gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    ||||||||||||||||||| |  |||| || ||||||||  ||||| |||||| |||| |||  |||||||||||||| | ||||||| ||||||||| |    
T  30618595 tgttgggtcacgaggggagccttgggg-accacccacatt-aggcaagagcaaccacataagtaagagagacaccacatttttacccataaccttaagac 30618692  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    || | |||||||| || ||| |||||||||||||||| ||||||    
T  30618693 aacg-gtttatgg-tcatcttacttataaagtgttcatcctcca 30618734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 22605301 - 22605343
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  22605301 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 22605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 5958643 - 5958764
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| ||||||||  |||||||| ||||| |||||||||||||  | |||| | |||||| |||||||||||  |   || ||||| ||||   |    
T  5958643 agagagacatcacactctatcccaaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaaca 5958742  T
Q  294 catataactcacacttgcacac 315  Q
    ||||||||||||| ||||||||    
T  5958743 catataactcacaattgcacac 5958764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 11637761 - 11637809
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  11637761 agagagacaccacactcttatccaaaatcttaagacaatgggtttatgg 11637809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 5034882 - 5034961
Alignment:
Q  215 ccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    ||||||||||||  || |||||| |||| || |||||||||||||||| ||||||||||  |||| |  |||||||||||    
T  5034882 ccaaaaccttaaaacattgagttgatgggtcatctcacttataaagtggtcaacctccacttttccaagcaatgtgggac 5034961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Original strand, 7588356 - 7588387
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  7588356 atgtgggacatataactcacacttgcacacaa 7588387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 21130103 - 21130145
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||| |||||||||||||||||||  |||||||    
T  21130103 acaccacactcttatccaaaaccttaaggcaatggatttatgg 21130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 10902463 - 10902496
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaa 220  Q
    ||||| ||||||||||||||||||||||||||||    
T  10902463 acaagtgagagagacaccacactcttacccaaaa 10902496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 11638052 - 11638092
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||||||||| |||||||||||||| | ||||||||||    
T  11638052 gagagagacaccatactcttacccaaaatcctaaggcaatg 11638092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 34661630 - 34661766
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| || ||||| |||| || ||||||||| | ||  ||||||||||| ||||   | ||||| | |||| |||||||||||| ||||||||||     
T  34661630 cagagcaaccatacaagtgagacagccaccacactttaacgtaaaaccttaagacaatatatgtatgggttctcttacttataaagtgatcaacctccac 34661729  T
Q  275 ctttctatccaatgtgggacatataactcacacttgc 311  Q
     ||||||   |||||| ||  | ||||||||||||||    
T  34661730 ttttctaagtaatgtgagatttctaactcacacttgc 34661766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 133 - 317
Target Start/End: Original strand, 19283434 - 19283618
Alignment:
Q  133 ttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaa 231  Q
    |||||||| ||||||||||||||||  || ||||||| ||||| ||||||| | |||||| ||||||||| ||||||||||| ||||||||||||||| |    
T  19283434 ttgggtcatgaggggagtcaaggggacct-cccacatccaggctagagcaaccgcacaagtgagagagacgccacactcttatccaaaaccttaaggcga 19283532  T
Q  232 tgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||  |||||||| ||| |||||| ||||||||||  |||||||||  |||||||||||||||||||||||||||||||    
T  19283533 tgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacacttgcacacaa 19283618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 26661552 - 26661685
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |   || || |    
T  26661552 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacc 26661651  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||| ||||||    
T  26661652 cgatgtgggacatataactcacacttgtacacaa 26661685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 17294700 - 17294572
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |   || ||||| |||    
T  17294700 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatg 17294601  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||| ||||||    
T  17294600 tgggacatataactcacacttgtacacaa 17294572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 1188609 - 1188759
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||  || ||||||||||||| | |||||||||||     
T  1188609 cagagcaaccacataagtgagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccac 1188708  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaatagttttt 325  Q
     ||||||||| || ||| ||||||||||||||||||||||||| |||||||    
T  1188709 ttttctatccgatatggaacatataactcacacttgcacacaacagttttt 1188759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 5319995 - 5320128
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |  |  ||||||||    
T  5319995 cacataagcaagagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatc 5320094  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||||| |||||||||||||||||||| ||||    
T  5320095 cgatgtggaacatataactcacacttgcatacaa 5320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 22077534 - 22077658
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||| |||||||| |||||||||||  |  ||||||||| ||||| |    
T  22077534 gagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgag 22077633  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  22077634 acatataactcacacttgcacacaa 22077658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 34365048 - 34364920
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| |||||||| |||||||||||  |   || ||||| |||    
T  34365048 aagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatg 34364949  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    || ||||||||||||||||||||||||||    
T  34364948 tgtgacatataactcacacttgcacacaa 34364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 34364643 - 34364502
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | || |||||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||  |      
T  34364643 agagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttact 34364544  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     || ||||| ||||| ||||||||||||||||||||||||||    
T  34364543 attttatccgatgtgagacatataactcacacttgcacacaa 34364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 66504 - 66635
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||||||||||||| | | ||||||||||||||||||||||| ||  ||||||||||||||| |||||||| |||||||||||  |  |||||||||     
T  66504 cacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccg 66603  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    || ||| |||||||||||||||||||||||||    
T  66604 atatggaacatataactcacacttgcacacaa 66635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 22793416 - 22793273
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaa-tgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||| ||| ||||||||  ||||||||  ||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||| |    
T  22793416 cagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctcta 22793317  T
Q  274 actttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||| | |||||||||||||||||||||||||| |||||    
T  22793316 cttttctatacgatgtgggacatataactcacacttgctcacaa 22793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 24600350 - 24600477
Alignment:
Q  190 agcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgt 289  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||  | |||| ||||||||  ||||||||||  |  ||||||||| || |    
T  24600350 agcgagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatat 24600449  T
Q  290 gggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||    
T  24600450 gggacatataactcacacttgcacacaa 24600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 41157119 - 41156986
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  41157119 cacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 41157020  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    |  | |||||||||||| ||||||||||||||||    
T  41157019 cgttatgggacatataattcacacttgcacacaa 41156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 40082532 - 40082402
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||  |   || |||||     
T  40082532 cacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttacttataaggtgttcaacctttactattttatccg 40082434  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||| ||||||||||||||||||||| |||||    
T  40082433 atgtaggacatataactcacacttgcgcacaa 40082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 44290856 - 44290983
Alignment:
Q  186 cacaagcgagagagacaccacactctt-acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcc 284  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || |||||    
T  44290856 cacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatcc 44290955  T
Q  285 aatgtgggacatataactcacacttgca 312  Q
     |||||||||||||||||||||||||||    
T  44290956 gatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 32594756 - 32594874
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||  |   || ||||  |||| |||    
T  32594756 agagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtagga 32594855  T
Q  294 catataactcacacttgca 312  Q
    |||||||||||||||||||    
T  32594856 catataactcacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 37556239 - 37556106
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca-actttctat 282  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||  ||||||||||  |   ||| |||    
T  37556239 cacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgg-tcctcttacttataagatgttcaacctttactatttttat 37556141  T
Q  283 ccaatgtgggacatataactcacacttgcacacaa 317  Q
    || ||||||||||||||||||||||||| ||||||    
T  37556140 ccgatgtgggacatataactcacacttgtacacaa 37556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 26661928 - 26662061
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||||||| |||||||||||  |   || ||||    
T  26661928 cacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatc 26662027  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      || ||||| |||||||||||||||| ||||||    
T  26662028 tgatatgggatatataactcacacttgtacacaa 26662061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 41157503 - 41157370
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||| ||||||||||||||||| |||||||| ||||||||| |||||||| |||||| |||||||| ||||||||| |  |   || ||||    
T  41157503 cacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatc 41157404  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||||||||||||||||||||||||||||    
T  41157403 tgatgtgggacatataactcacacttgcacacaa 41157370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 44290491 - 44290616
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||||  ||||||||||  |   || ||||| |    
T  44290491 acaagcaagaaagacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccga 44290590  T
Q  287 tgtgggacatataactcacacttgca 312  Q
    ||||||||||||||||||||||||||    
T  44290591 tgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 41759611 - 41759483
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||| ||||||||| |  |   || ||||    
T  41759611 cacataagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatc 41759512  T
Q  284 caatgtgggacatataactcacacttgca 312  Q
    | ||||| |||||||||||||||||||||    
T  41759511 cgatgtgtgacatataactcacacttgca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 29798317 - 29798194
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||  |||||| |||||||| |||||||||||  |   || |||||||||| |||    
T  29798317 agagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtagga 29798218  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  29798217 catataactcacacttgcatacaa 29798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 39066240 - 39066363
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||||||| || ||| | |||||| |||||||||||  |  ||||||||| |||||| |    
T  39066240 agagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaa 39066339  T
Q  294 catataactcacacttgcacacaa 317  Q
     |||||||||||||||||||||||    
T  39066340 tatataactcacacttgcacacaa 39066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 41142501 - 41142370
Alignment:
Q  184 cacacaagcgagagagacaccacactctt-acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctat 282  Q
    ||||||||| |||||||| |||||||||| ||| ||||||||||||||||| |||||||| |||| | |||||||| |||||||||||  |   || |||    
T  41142501 cacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttat 41142402  T
Q  283 ccaatgtgggacatataactcacacttgcaca 314  Q
    || |||||||||||||||||||||||||||||    
T  41142401 ccgatgtgggacatataactcacacttgcaca 41142370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 3550838 - 3550721
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||  |||||| |||||||| |||||||||||  |   || ||||  ||||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 3550739  T
Q  294 catataactcacacttgc 311  Q
    ||||||||||||||||||    
T  3550738 catataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 38804387 - 38804511
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||  |   || ||| |     
T  38804387 cacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcg 38804486  T
Q  286 atgtgggacatataactcacacttg 310  Q
    ||||||||| |||||||||||||||    
T  38804487 atgtgggacgtataactcacacttg 38804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 24132018 - 24132148
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| || |||||||||||||||||  |||||||| |||||||||||||||||||||||||| || | |||||| |||||||||||  |  ||||||||    
T  24132018 cacactagtgagagagacaccacact--tacccaaa-ccttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatc 24132114  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||| ||||||||||||||||| ||||| ||||    
T  24132115 cgatgagggacatataactcacagttgcatacaa 24132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 1187403 - 1187528
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||||  |||||| |||| ||||| ||||||| ||||||||||||| || ||||||||||||| |||| ||||||||  ||| ||| | ||||| |    
T  1187403 gagagagacgtcacacttttactcaaaatcttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgag 1187502  T
Q  293 acatataactcacacttgcacacaat 318  Q
    |||||||| |||||||||||||||||    
T  1187503 acatataattcacacttgcacacaat 1187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 37850622 - 37850763
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | |||||| ||||||||||||||||||||| || |||||||||  || |  |||||||| | |||| |||||||| |||||||||||| |      
T  37850622 agagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctctact 37850721  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     || ||| | ||||||||||||||||||||||||||||||||    
T  37850722 gttttatgcgatgtgggacatataactcacacttgcacacaa 37850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 9956045 - 9955902
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagttt-atggatcctctcacttataaagtgttcaacctcca- 273  Q
    ||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||||  |||| |||| |||||| |||||||| |||||||||||  |     
T  9956045 agagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttac 9955946  T
Q  274 actttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
      ||| ||||  |||||||||||||||||||||||  |||||||    
T  9955945 tttttttatctgatgtgggacatataactcacactaacacacaa 9955902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 41184489 - 41184588
Alignment:
Q  218 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |   || ||||| ||||| ||||||||||||||||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 48588528 - 48588646
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| || || ||| |||||||| |||||||||||  |   || ||||| |||| |||    
T  48588528 agagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcgga 48588627  T
Q  294 catataactcacacttgca 312  Q
    |||| ||||||||||||||    
T  48588628 catagaactcacacttgca 48588646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 307
Target Start/End: Original strand, 3537631 - 3537752
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||| ||| |||| |||||||||||  |   || |||||     
T  3537631 cacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccg 3537730  T
Q  286 atgtgggacatataactcacac 307  Q
    ||||||||||||||||| ||||    
T  3537731 atgtgggacatataactaacac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 3875361 - 3875494
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| || ||||||||| ||||| ||||||| ||||||||||||||||| |||||||  |||||| |||||||| |||| ||||||  |  ||| ||||    
T  3875361 cacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatc 3875460  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||| ||||||||||| || |||||||||||    
T  3875461 cgatgtgtgacatataactgactcttgcacacaa 3875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 5996894 - 5997034
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| |||||||  ||||||||||||||||||| || |||||||||||  |||||  | |||||||||||||| ||||||| ||||||| | |||      
T  5996894 agagcaaccacacaaatgagagagacaccacactctcactcaaaaccttaaa-caatggatatatggatcctctcatttataaaatgttcaagcaccact 5996992  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||| |  |||||||||||||||| ||| |||||||||||    
T  5996993 tttctaacttatgtgggacatataacccacgcttgcacacaa 5997034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 31767191 - 31767324
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||||||| |  ||| |||| |||||| |||||||| |||||||||||  |   || ||||    
T  31767191 cacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatc 31767290  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||||| ||||||||| |||||||||||||||    
T  31767291 cgatgtggaacatataacccacacttgcacacaa 31767324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 37555857 - 37555733
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | |  |||| || |||||| |||||||| || |||||||| ||   || ||||    
T  37555857 cacacaagcaagagagacaccacactcttacccaaaaccttaaggctaaggatttaagg-tcctcttacttataatgtattcaaccttcactattttatc 37555759  T
Q  284 caatgtgggacatataactcacactt 309  Q
    | ||||||||| ||||||||||||||    
T  37555758 cgatgtgggacttataactcacactt 37555733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 10351285 - 10351201
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    ||||| ||||||||| |||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||||||||||    
T  10351285 acaagtgagagagacgccacactcttacccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctc 10351201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 30630690 - 30630798
Alignment:
Q  206 cactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcac 305  Q
    |||||||||||||||| ||||||||||| |||||||| | |||| |||||||||||||  |||||  || ||| ||||| ||||| ||||||||| ||||    
T  30630690 cactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcac 30630789  T
Q  306 acttgcaca 314  Q
    |||||||||    
T  30630790 acttgcaca 30630798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 22077871 - 22077993
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    |||||| |||||||||||||| |||||||| ||| |||||||||||| |||||| ||||||||  ||||||||||  |  ||||||||| || |   |||    
T  22077871 agagacgccacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaaca 22077969  T
Q  296 tataactcacacttgcacacaata 319  Q
    ||||||||||||||||||||||||    
T  22077970 tataactcacacttgcacacaata 22077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 50052063 - 50052178
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||| |||||  |||  |||||||| |||||| ||||||||  ||||||||||  |   || ||||| ||||||||    
T  50052063 agagagacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtggga 50052162  T
Q  294 catataactcacactt 309  Q
    ||||||||||||||||    
T  50052163 catataactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 34649566 - 34649440
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| ||| |||||||| || ||||||||||||||||||||||||| |  |||||||| | ||  ||||||||| |||||||||||  |   || ||||    
T  34649566 cacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatc 34649467  T
Q  284 caatgtgggacatataactcacacttg 310  Q
    | |||||||||||||||||||||||||    
T  34649466 cgatgtgggacatataactcacacttg 34649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 66136 - 66252
Alignment:
Q  203 ccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttc-aacctccaactttctatccaatgtgggacat-ataa 300  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||| |||||||| |||||| |||||  |  ||||||||| ||||| ||||| || |    
T  66136 ccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgatta 66235  T
Q  301 ctcacacttgcacacaa 317  Q
    |||||||||||||||||    
T  66236 ctcacacttgcacacaa 66252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 14318985 - 14318909
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||| || ||| |||||||| |||||||||||    
T  14318985 agagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacct 14318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 22077160 - 22077285
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacc------------tccaactttctatccaatgtgg 291  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| || |||||||            ||| | ||||||||| ||||||    
T  22077160 cacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgattttctatccgatgtgg 22077259  T
Q  292 gacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||    
T  22077260 gacatataactcacacttgcacacaa 22077285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 44685582 - 44685451
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaa-cctccaactttctatcc 284  Q
    |||||| |||| ||||  |||||| ||||||||| | |||||||||||||||||| | |||||| |||||||| || ||||| |||  |  |||||||||    
T  44685582 cacaagagagaaagacgtcacactgttacccaaa-cattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 44685484  T
Q  285 aatgtgggacatataactcacacttgcacacaa 317  Q
     || |||||||||||||||||||||||||||||    
T  44685483 gatatgggacatataactcacacttgcacacaa 44685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 45084502 - 45084378
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |       |||||| |||||| |||||||| |||||||||||  |   || |||||     
T  45084502 cacaagcaagagagacaccactctcttacccaaaaccttaagacg------ttatgggtcctcttacttataaggtgttcaacctttactgttttatccg 45084409  T
Q  286 atgtgggacatataactcacacttgcacaca 316  Q
    |||||||| ||||||||||||||||||||||    
T  45084408 atgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 45839768 - 45839622
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtg-----ttcaacc 269  Q
    |||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||| |   ||||||| || ||| |||||||| |||     |||||||    
T  45839768 cagaacaatcccacaagcaagagagacaccacaatcttacccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttcgattcaacc 45839669  T
Q  270 tccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |   | ||||||||| ||||||||||||||||||| ||||| ||||||    
T  45839668 t-ttattttctatccgatgtgggacatataactcatacttgtacacaa 45839622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 11977398 - 11977276
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| ||||||||||||||||||||||||||| |  |||||||  | |||| |||||||| ||||||||| |  |   || || || ||||||||    
T  11977398 agagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtggga 11977299  T
Q  294 catataactcacacttgcacaca 316  Q
    ||||||||||||||||| |||||    
T  11977298 catataactcacacttgtacaca 11977276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 44043812 - 44043886
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||| || ||| |||||||| |||||||||    
T  44043812 agagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 45494014 - 45494137
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaa----gtgttcaacctccaactttctatccaatgt 289  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||| ||||||| |    |||||||||||  |   || ||||| ||||    
T  45494014 agagagacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgt 45494113  T
Q  290 gggacatat-aactcacacttgca 312  Q
    ||||||||| ||||||||||||||    
T  45494114 gggacatataaactcacacttgca 45494137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 50556588 - 50556450
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||| |||||||||||| |||||||| |||| ||| |||  ||||||||||||  |||  ||||| |||| |||||||||||||| ||||||||||||      
T  50556588 cagaacaatcacacaagtgagagagataccaaacttttattcaaaaccttaagaaaataggtttacggattctctcacttataaattgttcaacctccgc 50556489  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcac 313  Q
     |||||||   ||||| || ||||||| |||||||||||    
T  50556488 ttttctatatgatgtgtgatatataacccacacttgcac 50556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 32168673 - 32168793
Alignment:
Q  130 ttgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaagg 228  Q
    |||||||||||| ||||||| |   |||||||  ||||||  |||| ||| ||| | ||||||| |||||||| ||||||||||||||||||||| ||||    
T  32168673 ttgttgggtcactaggggagccttaggggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaagg 32168772  T
Q  229 caatgagtttatggatcctct 249  Q
    ||||| |||||||| ||||||    
T  32168773 caatgggtttatgggtcctct 32168793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 5575223 - 5575110
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||| ||||||||||| |||||||||||| || |||  ||||| | |||||| |||||||| |||||||||||  |   |||||||| | |||||    
T  5575223 gagagagacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaacctttactcttctatccgacgtggg 5575124  T
Q  293 acatataactcaca 306  Q
    |||||||| |||||    
T  5575123 acatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 24448396 - 24448272
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||| || ||||||| ||| |||||| |||||| |||||||||||||   ||||||||||||||| |||||||| ||||  ||||| |   ||||       
T  24448396 gagagacacgccacacttttatccaaaatcttaagacaatgagtttatgagccctctcacttataaaatgttcaacttccacttttctttgagatgtcta 24448297  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||| ||||||||||||||    
T  24448296 acatataacttacacttgcacacaa 24448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 312
Target Start/End: Original strand, 47379801 - 47379943
Alignment:
Q  177 gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaa-------gtgttcaacc 269  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||||||  |||||| |||||| || ||| |  | | |||||| ||       ||||||||||    
T  47379801 gagcaatcacataagtgagagagacgccacactcttatccaaaattttaaggtaatgagcttgtgggttatttaacttattaaatattaagtgttcaacc 47379900  T
Q  270 tccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    ||||  ||||||||| |||||||| ||||||||||||||||||    
T  47379901 tccacttttctatccgatgtgggatatataactcacacttgca 47379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 12772967 - 12772913
Alignment:
Q  217 aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||    
T  12772967 aaaaccttaagacaatgaatttatggattctctcacttataaagcgttcaacctc 12772913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 3537228 - 3537305
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    |||||||| |||||| |||||||| |||||||||||  |   || ||||| |||||||||||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 41184152 - 41184197
Alignment:
Q  218 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgt 263  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  41184152 aaaccttaaggcaatgggtttatggatcctcttacttataaagtgt 41184197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 11977062 - 11977026
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||||||||||||||||||||||||||||||    
T  11977062 agagagacaccacactcttacccaaaaccttaaggca 11977026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 30576604 - 30576700
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    ||||||||  ||||||| ||||||||||  ||| | ||||||||||| ||||| || |  || ||||| |||||||||| |||||||||||||||||    
T  30576604 cagagcaacaacacaagtgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctc 30576700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 47380190 - 47380254
Alignment:
Q  177 gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    |||||| || ||||| ||||||||   |||||||||||||||||| |||||||||||||||||||    
T  47380190 gagcaaccagacaagtgagagagatgtcacactcttacccaaaactttaaggcaatgagtttatg 47380254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 4956327 - 4956233
Alignment:
Q  178 agcaatcacacaagcgagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||| ||||||| ||||| | ||  |||||| ||||| ||||| |||  |||||||||||||||||||||| ||||||||  ||||||||||    
T  4956327 agcaatcgcacaagcaagagatagacgtcacacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacct 4956233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 12466402 - 12466365
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggca 230  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  12466402 gagagagacaccacactcttaccaaaaaccttaaggca 12466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 5528794 - 5528870
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||||| ||||||  |||||||||||||||||  ||||||||||||  |||||| | ||||||  ||||||||||    
T  5528794 agagagacgccacacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacct 5528870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 35154046 - 35154106
Alignment:
Q  197 gagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttata 257  Q
    |||||||||||||||| || ||||||||||| |||| |||||||||  ||||| |||||||    
T  35154046 gagacaccacactcttgccaaaaaccttaagacaatcagtttatgggccctcttacttata 35154106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 50051728 - 50051776
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||||    
T  50051728 agagagacaccacactcttacgcaaaaccttaagataatgggtttatgg 50051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 4878869 - 4878798
Alignment:
Q  246 ctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||| ||||||| || ||   || ||||| |||||| |||||||||||||| ||||||||||    
T  4878869 ctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaa 4878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Original strand, 35154171 - 35154202
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  35154171 atgtgggacatataactcacacttgcacacaa 35154202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 21378122 - 21378204
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||| |||||| ||||||||  | ||||||||  |   |||||||| || |||||||||||||| ||||||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaa 21378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 30207914 - 30207865
Alignment:
Q  202 accacactcttacccaaaaccttaaggcaatgagtttatggatcctctcac 252  Q
    |||||||| | |||||||||||||||||| || ||||||||||||||||||    
T  30207914 accacactgtaacccaaaaccttaaggcagtg-gtttatggatcctctcac 30207865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 9956213 - 9956258
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagttta 239  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||||    
T  9956213 agagagacatcacactcttacccaaaacattaagacaatgtgttta 9956258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 31973374 - 31973411
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  31973374 gagagagacatcacactcttacccaaaatcttaaggca 31973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 30208239 - 30208187
Alignment:
Q  199 gacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctca 251  Q
    ||||||||||| | |||||||||||||| ||| |||||||| || ||||||||    
T  30208239 gacaccacactttaacccaaaaccttaatgcattgagtttaagggtcctctca 30208187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 50051777 - 50051809
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||||||||    
T  50051777 tatccgatgtgggacatataactcacacttgca 50051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 4154689 - 4154829
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| |||||||||||||||  | ||||||||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||     
T  4154689 cagagcaaccacacaagcgagaga--cgccacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccac 4154786  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||  ||||||||||||||||||||||||||||||||    
T  4154787 ttttctatcagatgtgggacatataactcacacttgcacacaa 4154829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 132 - 312
Target Start/End: Complemental strand, 3669867 - 3669687
Alignment:
Q  132 gttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||||||||||| | |||||||| | ||||||  |||| ||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  3669867 gttgggtcacgaggggag-ctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 3669769  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    |||||||||||  |||||| |||||||| |||||||||||  |   || ||||  |||||||||||||||||||||||||||    
T  3669768 atgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 34835004 - 34834871
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||| ||||| |||||  |   || ||||    
T  34835004 cacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatc 34834905  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||| ||||||    
T  34834904 caatgtgggacatataactcacacttgtacacaa 34834871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 155 - 317
Target Start/End: Original strand, 4154281 - 4154443
Alignment:
Q  155 ggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcact 253  Q
    |||||| ||||||||  |||| ||||||| || ||||  |||||||||| ||||| |||||||||||  |||||||||||||||||||| || |||||||    
T  4154281 ggggaccacccacatctaggccagagcaaccaaacaattgagagagacatcacacacttacccaaaatattaaggcaatgagtttatgggtc-tctcact 4154379  T
Q  254 tataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||  ||||||||  |||| |||||||||||||||| ||||||||||    
T  4154380 tataaagtgttcaacctccacttttctatctgatgtaggacatataactcacatttgcacacaa 4154443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 3038320 - 3038453
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||||||||||||||  |   || ||||    
T  3038320 cacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatc 3038419  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||| ||||||    
T  3038420 cgatgtgggacatataactcacacttgtacacaa 3038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 5915993 - 5915867
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||| || ||  |  ||| ||||||    
T  5915993 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcct----cttataaagtgtt-aaactttacatttttatcca 5915899  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||| |||||||||||||||||||||||||||    
T  5915898 atgtaggacatataactcacacttgcacacaa 5915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 18372016 - 18372110
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  18372016 agagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacct 18372110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 9309474 - 9309350
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| || |||||| |||||||| ||||||||| |  |   || ||||| |||||||    
T  9309474 gagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtggg 9309375  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  9309374 acatataactcacacttgcacacaa 9309350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 34835337 - 34835205
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  34835337 cacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 34835238  T
Q  284 caatgtgggacatataactcacacttgcacaca 316  Q
      |||||||||||||||||||| |||| |||||    
T  34835237 ggatgtgggacatataactcacccttgtacaca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 45122097 - 45122221
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| | |||| |||||||| |||||||||||  |   || ||||| ||||| ||    
T  45122097 agagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgaga 45122196  T
Q  294 catataactcacacttgcacacaat 318  Q
    |||||||||||||||||||||||||    
T  45122197 catataactcacacttgcacacaat 45122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 317
Target Start/End: Original strand, 9620656 - 9620839
Alignment:
Q  132 gttgggtcacgaggggagtcaagggggactacccacatacaggca-gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||||||||||| |  |||||||   |||||| |||||  |||||| |||||||| |||||||||| || |||||||   |||| |||||||||    
T  9620656 gttgggtcacgaggggagccc-gggggaccgtccacatccaggcctgagcaaccacacaagtgagagagacatcaaactcttat--aaaatcttaaggca 9620752  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||| ||||||||||||||||||| ||||| || |  ||||||||   |||| ||||||||||||||||||||||||||    
T  9620753 atgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaa 9620839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 319
Target Start/End: Complemental strand, 5274957 - 5274768
Alignment:
Q  128 ttttgttgggtcacgaggggagtcaagggggactacccacatacagg-cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaa 226  Q
    ||||||||||||||||||||||||| |||   | |||||| | ||   ||||||||  |||||||||| ||||||| ||||||||||| ||||| |||||    
T  5274957 ttttgttgggtcacgaggggagtcagggg---ccacccacgtccaaatcagagcaacaacacaagcgatagagacatcacactcttactcaaaatcttaa 5274861  T
Q  227 ggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaata 319  Q
    |||||||| ||||||| || || || |||||||||||||||||||    ||| ||| |||||| | |||||||||||| ||||||||||||||    
T  5274860 ggcaatgattttatgggtcttcccatttataaagtgttcaacctctccttttttattcaatgtagaacatataactcatacttgcacacaata 5274768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 41972289 - 41972153
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaa---aaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttct 280  Q
    ||||||||| |||| ||| ||||||||||||||||   ||| ||| ||||||| |||||||| |||| |||||||||| |||||||||||  |  |||||    
T  41972289 cacacaagcaagagtgacgccacactcttacccaacaaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttct 41972190  T
Q  281 atccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||| ||||||||||||||||||||||||||||||||    
T  41972189 atccgatgtgggacatataactcacacttgcacacaa 41972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 9608863 - 9608740
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| |||||||| |||||||||||||||||  ||| |||||||| || ||| |||||||| |||||||||||  |  ||||||||| || |||||    
T  9608863 agagagacgccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatggga 9608764  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  9608763 catataactcacacttgcacacaa 9608740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 40518710 - 40518575
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||| |||  |||||||||||||||||||||||| || || |||||||| |||||| | |||||| |||||||||||  |  ||||||||    
T  40518710 cacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatc 40518611  T
Q  284 caatgtgggacatataactcacacttgcacacaata 319  Q
      ||||||||||||||||||||||||| ||||||||    
T  40518610 tgatgtgggacatataactcacacttgaacacaata 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 3670186 - 3670060
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||  |||||||| |||||  |||||||| ||||| |||||  |   || |||||     
T  3670186 cacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccg 3670087  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  3670086 atgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 45121952 - 45122070
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||  |   || ||| | ||||||||||    
T  45121952 agagacgccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggaca 45122051  T
Q  296 tataactcacacttgcaca 314  Q
    |||||||||||||||||||    
T  45122052 tataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 312
Target Start/End: Complemental strand, 30441266 - 30441081
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    ||||||||||||||||||| ||||| | |||  ||||||  |||| ||| ||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  30441266 tgttgggtcacgaggggagccaaggtg-actgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggc 30441168  T
Q  230 aatgagtttatggatcctctcactta----taaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    |||| ||||||||  ||||| |||||    ||| |||||||||||  |   || || || |||||||||||||||||||||||||||    
T  30441167 aatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataactcacacttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 33113397 - 33113530
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||   |||||||||  |   || ||||    
T  33113397 cacactagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatc 33113496  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||| |||||||||||||| ||||| ||||||    
T  33113497 cgatgtaggacatataactcaaacttgtacacaa 33113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 40518199 - 40518064
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacc--tccaactttcta 281  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||| |||  | |||||||| ||||||||||  | |   ||| ||    
T  40518199 cacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttactttttttta 40518100  T
Q  282 tccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||| |||||||||||||||||| ||||||    
T  40518099 tccaatgtggaacatataactcacacttgaacacaa 40518064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 147577 - 147454
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||  |||||||| |||||| | |||||| |||||||||||  |   || |||||     
T  147577 cacaagcaagagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccg 147478  T
Q  286 atgtgggacatataactcacactt 309  Q
    ||||||||||||||||||||||||    
T  147477 atgtgggacatataactcacactt 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 25561837 - 25561972
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttaccc-aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    ||||||| ||||||||| |||||||   ||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||| ||||||||| |  |     
T  25561837 agagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttac 25561936  T
Q  275 ctttctatccaatgtgggacatataactcacacttg 310  Q
      || ||||| |||||||||||||||||||||||||    
T  25561937 tcttttatccgatgtgggacatataactcacacttg 25561972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 30359389 - 30359266
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||||| ||||||||| |  |   || ||||| ||||| ||    
T  30359389 agagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgaga 30359290  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||||||    
T  30359289 catataactcacacttgtacacaa 30359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 6876892 - 6877026
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||| | ||||| ||||||||||||||||||||||| |||| |||||||| ||||| || ||| | |||||| |||||||||||  |  ||| ||||    
T  6876892 cacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatc 6876991  T
Q  284 caatgtgggac-atataactcacacttgcacacaa 317  Q
    | ||||||||| |||||||||||||||||||||||    
T  6876992 cgatgtgggactatataactcacacttgcacacaa 6877026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 34835603 - 34835517
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||||| |||||    
T  34835603 cacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 34835869 - 34835783
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||||| |||||    
T  34835869 cacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 45122752 - 45122666
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  45122752 cacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacct 45122666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 8918814 - 8918927
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||| ||||||||||||||||||||  |   | |||||  ||||||||||| ||||||    
T  8918814 cacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactc 8918913  T
Q  304 acacttgcacacaa 317  Q
    ||||||||||||||    
T  8918914 acacttgcacacaa 8918927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 9483229 - 9483303
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||| |||||||||||    
T  9483229 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacct 9483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 40991852 - 40991756
Alignment:
Q  213 acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacactt 309  Q
    |||||||||||| ||||| || |||||||| ||||||||||||| ||||||||||||||||  ||||||  ||||||||||| | ||||||||||||    
T  40991852 acccaaaaccttgaggcattgggtttatgggtcctctcacttatgaagtgttcaacctccacttttctaagcaatgtgggacttctaactcacactt 40991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 20995393 - 20995495
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    ||||||||||||||||||| || | ||||| ||||| ||  |||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  20995393 tgttgggtcacgaggggagcca-gagggaccacccatatctaggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggc 20995491  T
Q  230 aatg 233  Q
    ||||    
T  20995492 aatg 20995495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 40579539 - 40579622
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||| | |||||||||||||||||||| |||||||||| ||||| ||||||||| |||||| |||||||| |||||||||||    
T  40579539 acaagcaatagagacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacct 40579622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 1014277 - 1014403
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||||  ||||||||||||||||||||||||||| |||||| || ||||||| || |||||| |||||||| |||||||||||  |   || ||||      
T  1014277 cacaagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctg 1014376  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    ||||  |||||||||||||||||||||    
T  1014377 atgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 6651626 - 6651564
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6651626 caatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgaatttatgg 6651564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 20870603 - 20870689
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||| || |||||||| |||||| ||||||||  ||||||||||    
T  20870603 cacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacct 20870689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 5420779 - 5420646
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||| |||||  |||||||||||  ||||||||||||||||| |||||||  |||||| ||||||||  ||||||||||  |   |||||||    
T  5420779 cacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatc 5420680  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||||||||||||||  |||||||||| ||||    
T  5420679 cgatgtgggacatataatacacacttgcatacaa 5420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 1513955 - 1514079
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||| |||||||| ||||||||||||||||||  ||| ||||| || |||||| |||||||| |||||||||||  |   || ||||| ||||||||    
T  1513955 agagagataccacacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggga 1514054  T
Q  294 catataactcacacttgcacacaat 318  Q
     |||||||||| ||||| |||||||    
T  1514055 tatataactcatacttgtacacaat 1514079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 305
Target Start/End: Original strand, 9482636 - 9482755
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||| ||||||||||||  ||||| ||| |||||||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  9482636 cacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccc 9482735  T
Q  286 atgtgggacatataactcac 305  Q
    |||||| |||||||||||||    
T  9482736 atgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 30359727 - 30359604
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||| |||||||  ||| |||||||  |||||| |||||||| ||||||||| |  |   || ||||  ||||| ||    
T  30359727 agagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgaga 30359628  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||||||    
T  30359627 catataactcacacttgtacacaa 30359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 70304 - 70425
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||| ||||  |||||||||||| |||||||||||||| || |||||||| |||||| ||||||||  |||||||| |  |   || ||||    
T  70304 cacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatc 70403  T
Q  284 caatgtgggacatataactcac 305  Q
    | ||||||||||||||||||||    
T  70404 cgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 37544534 - 37544646
Alignment:
Q  198 agacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacata 297  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||| ||||||  ||||||| |||||||||||  |   || ||||| ||||| ||| ||    
T  37544534 agacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgactta 37544633  T
Q  298 taactcacacttg 310  Q
    |||||||||||||    
T  37544634 taactcacacttg 37544646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 9507898 - 9507772
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca----actttctatccaatgtg- 290  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||  |||||| |||||||| || ||||||||  |    ||||| |||||||| ||     
T  9507898 agagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttactgtacttt-tatccaatatgg 9507800  T
Q  291 -ggacatataactcacacttgcacacaa 317  Q
     ||| |||||||||||||||||||||||    
T  9507799 aggagatataactcacacttgcacacaa 9507772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 40417738 - 40417848
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| ||||| ||||||  |||| |  || ||| ||||||||||| | ||||||||       
T  40417738 agagcaatcacacaagtgagagagacaccacacttttatccaaaatcttaacgcaatggatttacgagtcatcttacttataaagtatccaacctccttt 40417837  T
Q  276 tttctatccaa 286  Q
    |||||||||||    
T  40417838 tttctatccaa 40417848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 6732018 - 6731965
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6732018 aagcaagagagacaccacactcttactcaaaaccttaaggcaatgaatttatgg 6731965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 32640558 - 32640627
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctct 249  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||||||||| |||||| | ||||||    
T  32640558 caatcacaaaagcaagagagacgcaacactcttacccaaaaccttaaggcaatgggtttatcggtcctct 32640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 147938 - 147890
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  147938 agagagacaccacactcttacccaaaaccttaaggcaataggtttatgg 147890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 1013913 - 1014029
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    ||||||| ||||||||||| ||||||  |||||||||| |||||| | |||||| |||||||  ||||||||| |  |   || ||||| |||||| |||    
T  1013913 agagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaaca 1014012  T
Q  296 tataactcacacttgca 312  Q
    |||||||||||||||||    
T  1014013 tataactcacacttgca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 9309101 - 9308972
Alignment:
Q  193 gagagagacaccacact---cttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgt 289  Q
    |||||||||||||||||   ||| ||||||||||| |||||||| |||||||| |||||| ||||||||  |||||||| |  |   || ||||  ||||    
T  9309101 gagagagacaccacactactcttgcccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgt 9309002  T
Q  290 g--ggacatataactcacacttgcacacaa 317  Q
    |  |||||||||||||||||||||||||||    
T  9309001 gtaggacatataactcacacttgcacacaa 9308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 9620384 - 9620451
Alignment:
Q  250 cacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||| |||||  ||||||| ||| |||||| |||||||| ||||||||||||||    
T  9620384 cacttataaagtgttcaaactccacttttctattcaacgtgggatatataactgacacttgcacacaa 9620451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 45121696 - 45121818
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||| | ||||||||||| ||||||||||||||  |  ||||||||||||||| |||||||| ||| |||||||  |   || ||||| ||||||||    
T  45121696 agagagatatcacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtggga 45121795  T
Q  294 catataactcacacttgcacacaa 317  Q
    || | |||||||||||| ||||||    
T  45121796 ca-acaactcacacttgtacacaa 45121818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 9609213 - 9609127
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||| ||| |||||||| ||||||||||||| ||||| ||||||| ||| |||||||| || ||| ||||||||  ||||||||||    
T  9609213 cacactagcaagagagacgccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacct 9609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 20995502 - 20995564
Alignment:
Q  255 ataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||  ||| ||||  ||||| ||||||||||||||||||||||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaa 20995564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 33832055 - 33831973
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||| | |||||| |||||||||||||||||| || |  ||||| | ||| ||| ||||||||||||||||||||||||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaa 33831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 45123124 - 45123002
Alignment:
Q  194 agagagacaccacactct--tacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgg 291  Q
    ||||||||||||||||||  ||||||||||||||||  |||  |||||||| || ||| |||||  | ||||| |||||  |   || ||||| ||||||    
T  45123124 agagagacaccacactctcttacccaaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgg 45123027  T
Q  292 gacatataactcacacttgcacaca 316  Q
    |||||||||||||||||||||||||    
T  45123026 gacatataactcacacttgcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 34219208 - 34219269
Alignment:
Q  229 caatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtg 290  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||  |||||| || |||||    
T  34219208 caataagtttatggatcctctctcttataaagtgttcaacctccacttttctaaccgatgtg 34219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 4715395 - 4715315
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||||||| |||||   || |||||| ||||||  ||||||||||| |||| ||||| |||||||||||||||||||||    
T  4715395 gagagagacagcacacgtatatccaaaatcttaagataatgagtttatagatcgtctcatttataaagtgttcaacctcca 4715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 16524501 - 16524446
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaa 231  Q
    ||||||| ||||||||  ||||||||||||||||||||| ||||||||||| ||||    
T  16524501 agagcaaccacacaagtaagagagacaccacactcttactcaaaaccttaaagcaa 16524446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 18371683 - 18371761
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcactta 255  Q
    ||||||| | |||||  |||||| |||||||||||||||||||||||||||||| ||| |||||||| || ||| |||||    
T  18371683 agagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaaggc-atgggtttatgggtcttcttactta 18371761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 40579301 - 40579348
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  40579301 cacaagcaagagagacaccacactcttacccaaaatcctaaggcaatg 40579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 43274824 - 43274883
Alignment:
Q  199 gacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    |||||||||||||||| |||||||||||| ||||  |||||||| |||||| ||||||||    
T  43274824 gacaccacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataa 43274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 2467634 - 2467507
Alignment:
Q  178 agcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactt 277  Q
    ||||| || ||||| |||||||||  |||||| ||||| ||||| ||||| ||| |||||||||    ||||||| ||||  ||||||||| || || ||    
T  2467634 agcaaccatacaagtgagagagacgtcacacttttaccaaaaactttaagacaacgagtttatgtgctctctcacatata--gtgttcaacttctaattt 2467537  T
Q  278 tctatccaatgtgggacatataactcacac 307  Q
    ||||||| | ||| ||||||||||||||||    
T  2467536 tctatccgacgtgagacatataactcacac 2467507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 8919174 - 8919220
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||    
T  8919174 cacacaagcaaaagagacaccacactcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 12284023 - 12283957
Alignment:
Q  162 acccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaag 227  Q
    ||||||||| |||| ||| ||| |||||||| ||||||||||| ||||||||| |||||||||||||    
T  12284023 acccacatagaggctagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaag 12283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcac 305  Q
    ||||||||||||||| |||||||| |||||||||||  |   || ||||| ||||||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 11442952 - 11442911
Alignment:
Q  213 acccaaaaccttaaggcaatgagtttatggatcctctcactt 254  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  11442952 acccaaaaccttaaggcattgagtttatgggtcctctcactt 11442911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 41129116 - 41129067
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||||  ||||||||||||||||| |||||||||||||||| |||||    
T  41129116 cacacaagtaagagagacaccacactcatacccaaaaccttaagacaatg 41129067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 18380059 - 18380171
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    |||| |||||||||||||| ||||||||||||| | || |||||| |  || || |||||||| |||||||||||  |   || ||| | |||||||| |    
T  18380059 agaggcaccacactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggata 18380158  T
Q  296 tataactcacact 308  Q
    |||||||||||||    
T  18380159 tataactcacact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 32305591 - 32305519
Alignment:
Q  198 agacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||| ||||||||||| |||||| ||||||| |||| |||||| | || ||| |||||||| |||||||||||    
T  32305591 agacgccacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacct 32305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 147855 - 147824
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  147855 atgtgggacatataactcacacttgcacacaa 147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 18645712 - 18645755
Alignment:
Q  279 ctatccaatgtgggacatataactcacacttgcacacaatagtt 322  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaacagtt 18645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 18372988 - 18373085
Alignment:
Q  208 ctcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacac 307  Q
    ||||||||||||||||   |||||||||||||||  |||||| | |||||| |||||||||||  |   || ||||| | ||||||||||||| ||||||    
T  18372988 ctcttacccaaaacct---ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataaatcacac 18373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 43398117 - 43398225
Alignment:
Q  203 ccacactcttacccaaaaccttaaggcaatgagtttatgg---atcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatata 299  Q
    ||||| ||||| ||||||| |||||||||||| |||||||    |||||| | |||||| |||||||||||  |  ||||||||| || || || |||||    
T  43398117 ccacattcttatccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttacttttctatccgatatgagatatata 43398216  T
Q  300 actcacact 308  Q
    |||||||||    
T  43398217 actcacact 43398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 12156708 - 12156745
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  12156708 cacactcttacccaaaaccttaagacaatgggtttatg 12156745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 27856257 - 27856172
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    |||||| ||||||||||| ||||| ||| |||||| ||||||||| || |||||||  ||||||  ||||||  ||| ||||||||    
T  27856257 cacaagtgagagagacacaacacttttatccaaaatcttaaggcagtgggtttatgagtcctctatcttatattgtgctcaacctc 27856172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 6731936 - 6731904
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||||||||    
T  6731936 tatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 18372656 - 18372718
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||||||||||||||   ||||||| |||||||  |||||| |||||| |||||||||||||    
T  18372656 cacactcttacccaaaacct---ggcaatgggtttatgagtcctcttacttat-aagtgttcaacct 18372718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 7554153 - 7554020
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||  |   || ||||    
T  7554153 cacacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatc 7554054  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||||||||||    
T  7554053 cgatgtgggacatataactcacacttgcacacaa 7554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 317
Target Start/End: Complemental strand, 7517750 - 7517575
Alignment:
Q  142 gaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttat 240  Q
    |||||||| ||||||| || ||||||||  |||| ||| ||| |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  7517750 gaggggagccaagggg-accacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttat 7517652  T
Q  241 ggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    || |||||| |||||||| |||||||||||  |   || ||||| ||||||||||||||||||||||||||||||||    
T  7517651 gggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaa 7517575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 131 - 317
Target Start/End: Original strand, 1085593 - 1085779
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    |||||||||| |||||||| || |||||||   ||||||  |||| ||| ||| ||||||||  |||||||| |||||||||||||||||||||||||||    
T  1085593 tgttgggtcatgaggggagcca-gggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggc 1085691  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||| |||||||| |||||| ||||||||||||||||||||  |   || ||||| ||||||||||||||||||||||||||||||||    
T  1085692 aatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 1085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 37533043 - 37533168
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||  |   || ||||||    
T  37533043 cacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcca 37533141  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  37533142 atgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 30244398 - 30244265
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||| || ||||||||  |   || ||||    
T  30244398 cacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatc 30244299  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||| ||||||    
T  30244298 cgatgtgggacatataactcacacttgtacacaa 30244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 30245195 - 30245072
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| |||||||||||  |   || ||||| |||||| |    
T  30245195 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaa 30245096  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||||||    
T  30245095 catataactcacacttgtacacaa 30245072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 34218067 - 34218197
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||| ||||||||| |  |  ||| ||||| |    
T  34218067 acaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccga 34218166  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    |||| ||||||||||||||| ||| ||||||    
T  34218167 tgtgagacatataactcacatttgtacacaa 34218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 8128471 - 8128604
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||  ||| |||||||| |||||| || ||||| |||||||||||  |  ||||||||    
T  8128471 cacataagcgagagtgacaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatc 8128570  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | || |||||||||||||||||||||||||||||    
T  8128571 cgatatgggacatataactcacacttgcacacaa 8128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 15902478 - 15902339
Alignment:
Q  133 ttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaat 232  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||| ||| ||||||||||||| |||     
T  15902478 ttgggtcacgaggggagtcc-gggggaccacccacatccaggcagaacaatcacacaagtgagagcgacaccacacttttatccaaaaccttaagacaac 15902380  T
Q  233 gagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    ||| |||||  |  | |||||||||||||||||||||||||    
T  15902379 gagcttatgtgtgatttcacttataaagtgttcaacctcca 15902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 319
Target Start/End: Complemental strand, 36623097 - 36622953
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||| ||||||||||||  |||||| ||||| |||| ||||||||||||||||||||||  |||||||||||||  ||||||||| |||| |||||  |     
T  36623097 cagaacaatcacacaagtaagagaggcaccatactcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttac 36622998  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaata 319  Q
      || ||||| ||||||||||||||||||||||||||||||||||    
T  36622997 tattttatccgatgtgggacatataactcacacttgcacacaata 36622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 23417 - 23540
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||| |||||||||||  |   || ||||| |||||| |    
T  23417 agagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaa 23516  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||| ||||||||||    
T  23517 catataactcacaattgcacacaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 22567071 - 22567201
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  22567071 cacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccg 22567170  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||| |||||||| ||||||||||||| ||||    
T  22567171 atgt-ggacatattactcacacttgcatacaa 22567201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 45434754 - 45434631
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||| |||||| |||||||| |||||||||||  |  ||| ||||| ||||||||    
T  45434754 agagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtggga 45434655  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||| ||||||| ||||||    
T  45434654 catataacttacacttgtacacaa 45434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 4124106 - 4124251
Alignment:
Q  172 aggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    ||||||| ||| || | ||| ||||||||||||||||| ||| |||||||||||| ||||||||||||| | ||||||||||||||||||||  ||||||    
T  4124106 aggcagaccaaccaaaaaagtgagagagacaccacacttttatccaaaaccttaatgcaatgagtttattggtcctctcacttataaagtgtcaaacctc 4124205  T
Q  272 caactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     || |||||| || |||| |||||| ||| ||||| ||||||||||    
T  4124206 aaattttctaaccgatgtaggacatgtaattcacagttgcacacaa 4124251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 118340 - 118464
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||| |||| ||||||||||||||||||||||| || |||| ||||||||||||||| |||||| | |||||||||||  |  ||||||||  |||||||    
T  118340 gagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtggg 118439  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||| ||||||||||||||    
T  118440 acatataacttacacttgcacacaa 118464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 29157701 - 29157565
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    |||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||| || ||| |||||||| |||||||||||  |      
T  29157701 agagcaactacacgagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttact 29157602  T
Q  276 tttctatccaatgtgggacatataactcacacttgca 312  Q
     || |||||  ||||||||||||||||||||||||||    
T  29157601 attttatccggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 16569314 - 16569191
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||| |||||||| || ||||||||  |   |||||||| ||||| ||    
T  16569314 agagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgaga 16569215  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  16569214 catataactcacacttgcatacaa 16569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 16596348 - 16596471
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||| |||||||| || ||||||||  |   |||||||| ||||| ||    
T  16596348 agagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgaga 16596447  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  16596448 catataactcacacttgcatacaa 16596471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 22566703 - 22566825
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||| ||||||||    
T  22566703 agagagac-ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggga 22566801  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||| ||||||||||||| ||||    
T  22566802 catattactcacacttgcatacaa 22566825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 6054677 - 6054562
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||| |  |   || ||||| ||||| |||    
T  6054677 gagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagac 6054578  T
Q  295 atataactcacacttg 310  Q
    |||||||| |||||||    
T  6054577 atataactaacacttg 6054562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 11845317 - 11845198
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  11845317 cacaagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccg 11845218  T
Q  286 atgtgggacatataactcac 305  Q
    |||||| |||||||||||||    
T  11845217 atgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 24177561 - 24177430
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||| ||||| ||||||||||| |||||||| ||| || |||||||| ||||||| |||  |   || |||||     
T  24177561 cacaagcaagagagacgccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccg 24177462  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||||||||||    
T  24177461 atgtgggacatataactcatacttgcacacaa 24177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 37533396 - 37533519
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||||||  |   || ||| ||    
T  37533396 cacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattca 37533495  T
Q  286 atgtgggacatataactcacactt 309  Q
    |||| | |||||||||||||||||    
T  37533496 atgtagaacatataactcacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 40094806 - 40094937
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||| | ||| |||||||| |||||| |||||||| ||||| |||||  |   || ||| |     
T  40094806 cacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcg 40094905  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||| ||||||||||||||||||||||||||    
T  40094906 atgtgagacatataactcacacttgcacacaa 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 9901761 - 9901638
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||  ||||||||||  |   || ||||| |||| |||    
T  9901761 agagagacaccacactcttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgt-gga 9901664  T
Q  294 catataactcacacttgcacacaata 319  Q
    ||||||||||||||||  ||||||||    
T  9901663 catataactcacacttatacacaata 9901638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 30253610 - 30253533
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| || |||||||||    
T  30253610 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacctc 30253533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 45754843 - 45754711
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||  || ||| |||||||| ||||||||| |  |   || ||||    
T  45754843 cacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatc 45754744  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||| |||||||||||||||||||| ||||||    
T  45754743 cgatgt-ggacatataactcacacttgtacacaa 45754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 45433367 - 45433236
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||  |||||||  | |||| |||||||| |||||||||||  |   || |||||     
T  45433367 cacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccg 45433268  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||  ||||||||||||||||| ||||||    
T  45433267 atgtggatcatataactcacacttgtacacaa 45433236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 19122859 - 19122773
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||||| |||||||||||    
T  19122859 cacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacct 19122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 14681627 - 14681510
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||||| || |||||||||||  |   || ||||  |||||||||    
T  14681627 gagagacaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggac 14681528  T
Q  295 atataactcacacttgca 312  Q
    |||||||| |||||||||    
T  14681527 atataacttacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 36939768 - 36939893
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||  ||||||| |||||| |||||||| ||||||||| |  |   || ||| | ||     
T  36939768 aagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatt 36939867  T
Q  289 tgggacatataactcacacttgcaca 314  Q
    ||||||||||||||||||||||||||    
T  36939868 tgggacatataactcacacttgcaca 36939893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 40230331 - 40230456
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||| ||| ||||||||||||||||| | ||| |||||||| |||||| ||||||||  |||||||| |  |  ||| ||| | ||||||||    
T  40230331 agagagacaccagacttttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtggga 40230430  T
Q  294 catataactcacacttgcacacaata 319  Q
    ||||||||| ||||||||||||||||    
T  40230431 catataacttacacttgcacacaata 40230456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 43241613 - 43241490
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| || ||| ||||| ||||||||||| |||| ||||||||  |||| | |||||||| |||||||||||  |  ||| ||||| |||||| |    
T  43241613 agagagacatcatacttttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaa 43241514  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  43241513 catataactcacacttgcacacaa 43241490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 36534825 - 36534947
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    ||||||| ||||||||||||||||||||||||| |  |  |||||||| |||||| |||||||| |||||||||||| |   || ||||| | |||||||    
T  36534825 gagagacgccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggac 36534924  T
Q  295 atataactcacacttgcacacaa 317  Q
    |||||| | ||||||||||||||    
T  36534925 atataagttacacttgcacacaa 36534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 20599441 - 20599317
Alignment:
Q  187 acaagcgagagagacaccacactct--tacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcc 284  Q
    |||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||   |||||| | |||||||||||| | |||  |  ||| |||||    
T  20599441 acaagcaagagagacaccacactctcttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatcc 20599342  T
Q  285 aatgtgggacatataactcacactt 309  Q
     || |||||||||||||||||||||    
T  20599341 gatatgggacatataactcacactt 20599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 37346043 - 37345911
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||| |||||||||  ||||||||||| |||||| ||||||||||  |||||||| || ||||||||||||| |||| ||||||||  ||||||||  |    
T  37346043 acaagtgagagagacgtcacactcttactcaaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttttctatcaga 37345944  T
Q  287 tgtgggac--atataactcacacttgcacacaa 317  Q
    | |  |||  |||||||||||||||||||||||    
T  37345943 tatatgacatatataactcacacttgcacacaa 37345911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 47129214 - 47129097
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||||||||||||| ||||||||||||||| || ||| |||||||| |||||| ||||||||   |||||||||  |   || ||||| ||||| |    
T  47129214 gagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgag 47129115  T
Q  293 acatataactcacacttg 310  Q
    ||||||||||||||||||    
T  47129114 acatataactcacacttg 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 1085288 - 1085412
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |  |||||||| |  |   || ||||| || |||||    
T  1085288 agagaaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatggga 1085387  T
Q  294 cat-ataactcacacttgcacacaa 317  Q
    ||| | |||||||||||||||||||    
T  1085388 cataaaaactcacacttgcacacaa 1085412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 24838731 - 24838818
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcc-tctcacttataaagtgttcaacct 270  Q
    ||||||||| ||||||||  |||||||||||||||||||||||| ||| | |||||||||||| ||| |||||||| |||||||||||    
T  24838731 cacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacct 24838818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 28301613 - 28301706
Alignment:
Q  224 taaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||| |||||||| |||||| |||||||| ||||||| | |  |  ||||||||| ||||| ||||||||||||||||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaa 28301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 37167907 - 37167844
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctct 249  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||    
T  37167907 cacaagcaagagagacaccacactcttacccaaaactttaagtcaatggatttatggatcctct 37167844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 30032693 - 30032611
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    ||||||| |||||||   |||||||||||||||||||||||||| ||  |||||||||| |||| |||||||| |||||||||    
T  30032693 cacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaac 30032611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 21416180 - 21416229
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21416180 gagagagacaccacactcttacccaaaaccctaaggcaatgggtttatgg 21416229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 47129495 - 47129450
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaa 231  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  47129495 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 41910657 - 41910757
Alignment:
Q  217 aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacaca 316  Q
    |||| |||||| ||||| |||||||| |||||||| |||||| || ||||||||  |   || ||||| |||||||||||||||||||||||| ||||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacaca 41910756  T
Q  317 a 317  Q
    |    
T  41910757 a 41910757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 23569043 - 23569090
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  23569043 gagagacatcacactcttacccaaaaccttaaggcaatgggtttatgg 23569090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 10341894 - 10341829
Alignment:
Q  250 cacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacac 315  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||| | | ||||||||    
T  10341894 cacttataaagtgttcaacctccacttttctatccgatgtgagacatataacttatatttgcacac 10341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 28300293 - 28300366
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttat-ggatcctctcacttataaagtgttca 266  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||| || | |||| |||||||| |||||||    
T  28300293 agagagacgccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 30244733 - 30244696
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30244733 tatccaatgtgggacatataactcacacttgcacacaa 30244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 21619066 - 21619133
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||| || ||||| || ||| |||||||||| ||||||||||||||||| ||||| ||||||||    
T  21619066 cagagcaaccatacaagtgaaagatacaccacacttttacccaaaaccttaagacaatgggtttatgg 21619133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 28300598 - 28300644
Alignment:
Q  184 cacacaagcgagagagacaccacactctta-cccaaaaccttaaggc 229  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  28300598 cacacaagcaagagagacaccacactcttaccccaaaaccttaaggc 28300644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 37532783 - 37532821
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaacctt 224  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  37532783 cacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 14681319 - 14681287
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||||||||    
T  14681319 tatccaatgtgggacatataactcacacttgca 14681287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 30245561 - 30245489
Alignment:
Q  245 cctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||||| |||||||||||  |   || ||||  ||||||||||||||||||||||||||||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaa 30245489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 30255406 - 30255334
Alignment:
Q  245 cctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||||| |||||||||||  |   || ||||| |||||||||||||||| |||||||||||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaa 30255334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 37345728 - 37345652
Alignment:
Q  165 cacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    ||||| |||||||||||| |  ||||| |||||||||  || ||||||||| ||||||||||||||||  |||||||    
T  37345728 cacatccaggcagagcaaccgtacaagtgagagagacgtcagactcttaccaaaaaccttaaggcaatatgtttatg 37345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 36109006 - 36109080
Alignment:
Q  243 atcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||| |||||||| |||||||||||  |   || ||||| ||||| || |||||||||||||||||||||||    
T  36109006 atcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaa 36109080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 21416470 - 21416519
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||| ||||||||||||||  ||| ||| ||||||||||    
T  21416470 gagagagacaccacattcttacccaaaacccaaagacaacgagtttatgg 21416519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 23061838 - 23061882
Alignment:
Q  46 atatcatggtccctatagaccttatgcaaagagtcacttgtaaca 90  Q
    |||||||||||| | | |||||| |||||||||||||||||||||    
T  23061838 atatcatggtccatgtggaccttgtgcaaagagtcacttgtaaca 23061882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 42282101 - 42282137
Alignment:
Q  237 ttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||| |||| |||||||||||||||||||||||||    
T  42282101 ttatgggtcctttcacttataaagtgttcaacctcca 42282137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 33561473 - 33561614
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    |||||||||| | ||| |||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||      
T  33561473 agagcaatcataaaagtgagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccact 33561572  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||  |||||| |||||||||||||||||||||||||    
T  33561573 tttctatctgatgtggaacatataactcacacttgcacacaa 33561614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 30313314 - 30313173
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||     
T  30313314 cagagcaaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttat-aagtgttcaacctccac 30313216  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||| ||||| |||||||||| ||| |||||||||||    
T  30313215 ttttctatccgatgtgagacatataacacacgcttgcacacaa 30313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 30323581 - 30323459
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||  || ||||||    
T  30323581 gagagacgccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggac 30323482  T
Q  295 atataactcacacttgcacacaa 317  Q
    ||||||| |||||||||||||||    
T  30323481 atataacacacacttgcacacaa 30323459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 962726 - 962593
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||  |  ||||||||    
T  962726 cacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatc 962627  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||||| ||||    
T  962626 cgatgtgggacatataactcacacttgcatacaa 962593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 36178614 - 36178763
Alignment:
Q  164 ccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtg 262  Q
    ||||||| |||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||    
T  36178614 ccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtg 36178713  T
Q  263 ttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    ||||||||  |   || ||||| |||||||||||||||||||||||||||    
T  36178714 ttcaacctttactattttatccgatgtgggacatataactcacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 28254276 - 28254400
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||  |  ||||||||| |||||||    
T  28254276 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtggg 28254375  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||| ||||||| ||||||||    
T  28254376 acatataagtcacactggcacacaa 28254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 29873558 - 29873700
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaa 274  Q
    |||||||| |||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||| |||||||||||||     
T  29873558 cagagcaaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccac 29873657  T
Q  275 ctttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||  ||||||||||| |||| ||| |||||||||||    
T  29873658 ttttctatctgatgtgggacatgtaacacacccttgcacacaa 29873700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 28531353 - 28531477
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||     ||||||||| |||||||    
T  28531353 gagagagtcaccacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtggg 28531452  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  28531453 acatataactcacacttgcacacaa 28531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 36005912 - 36006042
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||   ||||||||| |     
T  36005912 cacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaa-cttttactttctattcg 36006010  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  36006011 atgtgggacatataactcacacttgtacacaa 36006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 14745707 - 14745825
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||||||||||||    
T  14745707 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtggga 14745806  T
Q  294 catataactcacacttgca 312  Q
    |||||||||||||||||||    
T  14745807 catataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 310
Target Start/End: Complemental strand, 6421511 - 6421387
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||| |||||||| |||||||||||  |   || |||||     
T  6421511 cacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccg 6421412  T
Q  286 atgtgggacatataactcacacttg 310  Q
    |||||||||||||||||||||||||    
T  6421411 atgtgggacatataactcacacttg 6421387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 316
Target Start/End: Original strand, 29874021 - 29874185
Alignment:
Q  153 agggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctca 251  Q
    ||||||||  ||||||| ||||| | ||||| | |||||| | || |||| ||||||||||| ||||||||||||||||||| |||||||| ||||| ||    
T  29874021 agggggaccgcccacatccaggccaaagcaaccgcacaagtgggatagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtcctccca 29874120  T
Q  252 cttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacaca 316  Q
     |||||||||||||||||||||  ||||||||  |||||||||||||||| |||||||| |||||    
T  29874121 attataaagtgttcaacctccacttttctatctgatgtgggacatataacacacacttgtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 37106320 - 37106188
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||| |||||||||||  |   ||     
T  37106320 caatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 37106221  T
Q  280 tatccaatgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||||||||    
T  37106220 tatccgatgtgggacatataactcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 15880389 - 15880258
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  15880389 cacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccg 15880290  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||||| |||||||||||||||||| ||||||    
T  15880289 atgtggaacatataactcacacttgtacacaa 15880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 37106049 - 37105924
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||| |||||||||||  |   || ||| | |    
T  37106049 acaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcga 37105950  T
Q  287 tgtgggacatataactcacacttgca 312  Q
    ||||||||||||||||||||||||||    
T  37105949 tgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 41283505 - 41283633
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  41283505 cacacaaacaagagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 41283604  T
Q  284 caatgtgggacatataactcacacttgca 312  Q
    | || ||||||||||||||||||||||||    
T  41283605 cgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 35580764 - 35580886
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| |  |   || ||||| ||||||||    
T  35580764 agagagacgccgcactcttacccaaaaccttaaggcaatgggtttatgg-tcctctcacttataaggtgttcaacatttattgttttatccgatgtggga 35580862  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  35580863 catataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 5543030 - 5543156
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||||||| |||||||||||  |   || ||||      
T  5543030 cacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcgg 5543129  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  5543130 atgtgggacatataactcacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 40733645 - 40733510
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||||   |  |||||||| |||||| |||||||| ||||||||| |  |  ||| ||||    
T  40733645 cacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatc 40733546  T
Q  284 caatgtgggacatataactcacacttgcacacaata 319  Q
      ||||||||||||||||||||||||| ||||||||    
T  40733545 tgatgtgggacatataactcacacttgtacacaata 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 42514767 - 42514644
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||||| |||||| |||||||| |||||||||||  |  ||||||||  |||| |||    
T  42514767 agagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtagga 42514668  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  42514667 catataactcacacttgcatacaa 42514644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 5542657 - 5542783
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||| |||||| |||||||| |||||||||||  |   || ||| |     
T  5542657 cacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcg 5542756  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    || ||||||||||||||||||||||||    
T  5542757 atatgggacatataactcacacttgca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 33953821 - 33953934
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    |||||||||||||||||  |||||||||   |||||||| |||||||||||||| |||||||||||||||  ||||||||  ||||||||| ||||||||    
T  33953821 cacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactc 33953920  T
Q  304 acacttgcacacaa 317  Q
    ||| ||||||||||    
T  33953921 acatttgcacacaa 33953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 40679669 - 40679792
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||||| | |||| |||||||| ||||||||||   |  ||||||||| || |||||    
T  40679669 agagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatggga 40679768  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||| ||||||||||    
T  40679769 catataactcacatttgcacacaa 40679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 15511525 - 15511611
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||| |||||||||||    
T  15511525 cacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacct 15511611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 315
Target Start/End: Complemental strand, 7598354 - 7598225
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| ||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||| | |||||| ||||| |||||  |  ||||||| |     
T  7598354 cacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcg 7598255  T
Q  286 atgtgggacatataactcacacttgcacac 315  Q
    |||| | |||||||| ||||||||||||||    
T  7598254 atgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 41678401 - 41678532
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||| |||||||||   |||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||| |||||||   ||||||||  |    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaaag-gtttatgggtcctctcacttataaagtgtttaacctccccttttctatctga 41678499  T
Q  287 tgtgggac--atataactcacacttgcacacaa 317  Q
    |||| |||  |||||||||||||||||||||||    
T  41678500 tgtgagacatatataactcacacttgcacacaa 41678532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 38796648 - 38796783
Alignment:
Q  184 cacacaagcgagagagacaccaca--ctcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttcta 281  Q
    ||||||||| | |||||| |||||  ||||||||||||||||||||||| |  |||||||| |||||| |||||||| |||||||||||  |   || ||    
T  38796648 cacacaagcaatagagacgccacatactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgtttta 38796747  T
Q  282 tccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||  ||||||||||||||||||||||||||||||||    
T  38796748 tcagatgtgggacatataactcacacttgcacacaa 38796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 311
Target Start/End: Complemental strand, 31385865 - 31385738
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| || ||||||||||||||  | |||||||||||||||||||| |||||||| |||| |||||||||| ||| ||||||||||  |||||| |    
T  31385865 cacacaagtgaaagagacaccacacttattcccaaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacctccatttttctaac 31385766  T
Q  284 caatgtgggacatataactcacacttgc 311  Q
    | ||||  ||| | ||||||||||||||    
T  31385765 cgatgtcagacttctaactcacacttgc 31385738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 3594219 - 3594341
Alignment:
Q  195 gagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggac 294  Q
    |||||| | ||||||||||| ||||| ||||| |||||| ||||||||||||| ||||||||||||||||| |||||||  ||||||| |  ||||  ||    
T  3594219 gagagatatcacactcttactcaaaatcttaaagcaatgtgtttatggatcctatcacttataaagtgttcgacctccacttttctattcgttgtgaaac 3594318  T
Q  295 atataactcacacttgcacacaa 317  Q
    ||| ||||||||||| |||||||    
T  3594319 atacaactcacactttcacacaa 3594341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 6422238 - 6422152
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||| | |||||| |||||||||||    
T  6422238 cacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacct 6422152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 33731771 - 33731653
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||| |||||||  |   || ||||| |||    
T  33731771 aagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatg 33731672  T
Q  289 tgggacatataactcacac 307  Q
    || || |||||||||||||    
T  33731671 tgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 30312971 - 30312828
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagc-gagagagacaccacactcttacccaaaaccttaagg 228  Q
    ||||||||||||||||||| |  ||||||| |||||||| ||||| ||||||| | |||||   |||||||||  |||||| ||||||||||||||||||    
T  30312971 tgttgggtcacgaggggag-ctcgggggaccacccacattcaggccagagcaaccgcacaaattgagagagactacacacttttacccaaaaccttaagg 30312873  T
Q  229 caatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
     ||| ||||||||| || ||| | |||||||||||||||||||||    
T  30312872 aaataagtttatgggtcatctaagttataaagtgttcaacctcca 30312828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 31468800 - 31468909
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    |||||||  | ||||||||  |   || ||||| ||||||||||||||||||    
T  31468800 cacactcttacccaaaaccttaaggcaatgagtttatgggtcct----cttataagatattcaacctttactattttatccgatgtgggacatataactc 31468895  T
Q  304 acacttgcacacaa 317  Q
    ||||||||||||||    
T  31468896 acacttgcacacaa 31468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 37632637 - 37632765
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||| ||||||||||||||||||||||||||| |  ||| |||||||| |||||| ||||||||| |||  |||||  |   || ||||| |||| |||    
T  37632637 agagatacaccacactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtagga 37632736  T
Q  294 catataactcacacttgcacacaatagtt 322  Q
    |||||||||||||||||||||||| ||||    
T  37632737 catataactcacacttgcacacaacagtt 37632765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 7598729 - 7598606
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||        |||||| |||||| |||||||| |||||||||||  |  ||| ||||    
T  7598729 cacacaagtgagagagacaccacactcttaccaaaaacgttaagg--------ttatgggtcctcttacttataaggtgttcaacctttacttttttatc 7598638  T
Q  284 caatgtgggacatataactcacacttgcacac 315  Q
      ||||||||||||||||||||||||||||||    
T  7598637 tgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 16542574 - 16542444
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||| ||||||||  | |||||||||| ||||| |||||||||||||||||||   |||||| | |||||| |||||||||||  |   || ||||| |    
T  16542574 acaagtgagagagatgctacactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccga 16542475  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    |||||||| ||||||||||||||||||||||    
T  16542474 tgtgggacttataactcacacttgcacacaa 16542444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 36178201 - 36178287
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| | | || |||||||| |||||||||||    
T  36178201 cacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacct 36178287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 37895107 - 37895224
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatata 299  Q
    |||||||||||||||||||||||||||||||||| |||||||  | || | |||| ||| || |||||| |  |  ||||||||| ||||||||||||||    
T  37895107 acaccacactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatata 37895206  T
Q  300 actcacacttgcacacaa 317  Q
    ||||| ||| ||||||||    
T  37895207 actcaaactcgcacacaa 37895224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 5367581 - 5367497
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||| |||||||| ||||||||||||||||||||||||||  ||| ||| ||||||| ||| |||||||| |||||||||||    
T  5367581 cacaagcaagagagacgccacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacct 5367497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 2336761 - 2336663
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactctta-cccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||||| |||||||| |||   ||||||||| ||||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  2336761 cagagcaaccacacaagtgagttggacaccaca-tcttaacccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctcca 2336663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 6713109 - 6712978
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttaccc-aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaacttt 278  Q
    ||||| || |||| ||||||||| ||||||||||||| |||||||||| |||||  |||||||| |||||| |||||||| ||||||||| |  |   ||    
T  6713109 caatcccataagcaagagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgtt 6713010  T
Q  279 ctatccaatgtgggacatataactcacacttg 310  Q
     ||||| ||||| |||||||||||||||||||    
T  6713009 ttatccgatgtgagacatataactcacacttg 6712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 29676655 - 29676543
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||      |||||||||||||||| | ||||||||||||| |||||||| ||  |   || ||||||    
T  29676655 cacaagcaagagagacaccacactcttacccaaaa------ggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatcca 29676562  T
Q  286 atgtgggacatataactca 304  Q
    ||||| |||||||||||||    
T  29676561 atgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 6421868 - 6421794
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctct 249  Q
    |||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  6421868 cagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctct 6421794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 14745334 - 14745452
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||  ||||| ||  |||||||||   |   || ||| | ||||||||    
T  14745334 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtggga 14745433  T
Q  294 catataactcacacttgca 312  Q
    ||||||||||||| |||||    
T  14745434 catataactcacagttgca 14745452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 37894731 - 37894857
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||| |||||||||| ||| |||||| ||||||||||||  ||||||  || ||| |||||||| || || | |||  |  ||||||| |||||||||    
T  37894731 gagagacacaccacacttttaaccaaaatcttaaggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtggg 37894830  T
Q  293 acatataactcacacttgcacacaata 319  Q
    |||||||||||||| ||||||||||||    
T  37894831 acatataactcacatttgcacacaata 37894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 40163402 - 40163520
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaacctt-aaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctat 282  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||| || |  ||| |||| || ||| |||||||| |||||||||||  |  |||||||    
T  40163402 cacacaagcaagagagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttacttataaggtgttcaacctttacttttctat 40163501  T
Q  283 ccaatgtgggacatataac 301  Q
    || ||||||||||||||||    
T  40163502 ccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 315
Target Start/End: Complemental strand, 1770018 - 1769889
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||  |||| | | || || |||||||||||  |||||| |||||||| ||||||||| |  |   || |||||     
T  1770018 cacaagcaagagagacaccacactcttattcaaagcttcaaagctatgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccg 1769919  T
Q  286 atgtgggacatataactcacacttgcacac 315  Q
    ||||| ||||||||||||||||||||||||    
T  1769918 atgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 3673186 - 3673121
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaa 259  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||    
T  3673186 agagagacatcacactcttagccaaaatcttaaagcaatgagtttatggatcctcttacttataaa 3673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 29677026 - 29676898
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg-----atcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||      ||||||||| ||||| ||||| |||||  |   || ||||| |||    
T  29677026 agagagacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaacctttactcttttatccgatg 29676927  T
Q  289 tgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| |||||||||    
T  29676926 tgggacatataactcacacctgcacacaa 29676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 36178320 - 36178427
Alignment:
Q  205 acactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactca 304  Q
    ||||||||||||||||||||||| ||||| |||||||  ||| || |||||||| |||||| ||||  |   || ||||| | |||||||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactca 36178419  T
Q  305 cacttgca 312  Q
    ||||||||    
T  36178420 cacttgca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 40734010 - 40733876
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||  | || |||||   ||||| |||||||| ||||| || ||  |   || |||     
T  40734010 cacacaagcgagacagacaccacactcttacccaaaactttaaggctgt-aggttatgagccctcttacttataaggtgttaaatctttactcttttatt 40733912  T
Q  284 caatgtgggacatataactcacacttgcacacaata 319  Q
    | ||||||||||||||||||||||||| ||||||||    
T  40733911 cgatgtgggacatataactcacacttgtacacaata 40733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 23346362 - 23346230
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||| ||| ||||||||  ||||| | |||||| ||||| |||||  |  ||||||| |     
T  23346362 cacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttctatacg 23346264  T
Q  286 atgtgggac--atataactcacacttgcacacaa 317  Q
    ||||| |||  |||||||||||||| ||||||||    
T  23346263 atgtgagacatatataactcacactcgcacacaa 23346230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 31899496 - 31899589
Alignment:
Q  224 taaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||| |  |   || ||||| |||||| ||||||||||||||||| |||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaa 31899589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 2323710 - 2323655
Alignment:
Q  217 aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  2323710 aaaaccttaaggcattg-gtttatggatcctctcacttataaagtgtccaacctcca 2323655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 12910335 - 12910223
Alignment:
Q  205 acactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactca 304  Q
    ||||||||||||||||||||||| |||||| |||||   || | |||||||||| | |||||||||  |  |||| |||| |||||| ||||||||||||    
T  12910335 acactcttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataactca 12910236  T
Q  305 cacttgcacacaa 317  Q
     |||| |||||||    
T  12910235 aacttacacacaa 12910223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 33954301 - 33954424
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||| |||||||||||||||||| | |||||||  || ||||||  || | | | ||||| | |||| |||||| |  ||||||||  |||||||    
T  33954301 gagagagacgccacactcttacccaaaatcgtaaggcataga-tttatgagtcatttaagttatataatgtttaacctcaacttttctatctgatgtggg 33954399  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  33954400 acatataactcacacttgcacacaa 33954424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 35580477 - 35580540
Alignment:
Q  193 gagagagacaccacactct--tacccaaaaccttaaggcaatgagtttatggatcctctcactt 254  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||| |||||    
T  35580477 gagagagacgccacactctcttacccaaaaccttaaggcaatgagtttatgggtcctcacactt 35580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 3672819 - 3672768
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatc 245  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  3672819 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatagatc 3672768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 8904564 - 8904481
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaa 259  Q
    ||||||||  || ||| ||||||||||||||||| |||||||||||| || ||||||  ||||||||||||  |||||||||||    
T  8904564 agagcaatagcataagtgagagagacaccacacttttacccaaaaccatatggcaattggtttatggatcccatcacttataaa 8904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 3673117 - 3673080
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3673117 tatccaatgtgggacatataactcacacttgcacacaa 3673080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 6421754 - 6421689
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctct 249  Q
    ||||||||  ||||||||||||||||||||||||||||||| || ||||  |||||||| ||||||    
T  6421754 cacacaagttagagagacaccacactcttacccaaaacctttagtcaataggtttatgggtcctct 6421689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 18204406 - 18204547
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    |||||||  ||||||  ||||||||||||||| | ||||| ||||| ||||  |||||||||||||| |||| ||| |||| || || |||| ||||       
T  18204406 agagcaacaacacaaatgagagagacaccacatttttacctaaaacattaaaacaatgagtttatgggtcctttcatttattaaatgctcaatctccgct 18204505  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||| || |  |||||| | ||||||||||||||||||||    
T  18204506 tttctaaccgacttgggacttctaactcacacttgcacacaa 18204547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 28254165 - 28254254
Alignment:
Q  207 actcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacat 296  Q
    |||||||||| |||| ||||||||| | |||||||  |||||| ||||||||||||||||||||  |  ||||||||| ||||| |||||    
T  28254165 actcttaccctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 34481372 - 34481268
Alignment:
Q  206 cactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcac 305  Q
    ||||||||||||||||||||| ||||| | ||||| ||| || ||| ||||||| | |||||||||||  ||| ||||| | ||| || ||||||||||     
T  34481372 cactcttacccaaaaccttaaagcaataaatttatagattctatcatttataaaatattcaacctccacttttatatccgacgtgagaaatataactcat 34481273  T
Q  306 acttg 310  Q
    |||||    
T  34481272 acttg 34481268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 9231367 - 9231244
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||| || ||||||||| ||||||| |||||||  || ||| ||||||||||| | ||||||  ||||||||||  |  ||||||||  || || ||    
T  9231367 agagagatactacactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatctgatatgaga 9231268  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||| |||| |||||||    
T  9231267 catataactcatacttacacacaa 9231244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 31259658 - 31259732
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||| |||||||||||||||||||||||||||  ||  |||||||| || ||| |||||||| ||||| |||||    
T  31259658 agagataccacactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacct 31259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 36784290 - 36784364
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||||| ||| | |||||||| || ||| ||||||||    
T  36784290 cacacaagcaagagagacacaacacttttatccaaaaccttaagacaaagggtttatgggtcatcttacttataa 36784364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 38796299 - 38796381
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||| | |||||| |||||||| ||||||||| |  |   || ||||| ||||||||||||||||||||||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaa 38796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 28226456 - 28226407
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||||||||||| |||||| |||| ||||| ||||||||    
T  28226456 gagagagacaccacactcttacctaaaaccctaagacaatgtgtttatgg 28226407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 36785689 - 36785726
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  36785689 tatccgatgtgggacatataactcacacttgcacacaa 36785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 12529068 - 12529191
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||| ||  ||||| | ||||| |||||||||||||||||||  |||||| |||||||  |||||||| ||  |   || |||   |||| |||    
T  12529068 agagagacactacgttcttatctaaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtagga 12529167  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  12529168 catataactcacacttgcatacaa 12529191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 15689441 - 15689484
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagttta 239  Q
    |||||||||||| | ||||||||||||||||| |||||||||||    
T  15689441 agagacaccacatttttacccaaaaccttaagacaatgagttta 15689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 16590914 - 16590883
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  16590914 atgtgggacatataactcacacttgcacacaa 16590883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 22062833 - 22062882
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||| ||||||||||||||||||||||| |||  |||| |||||||||    
T  22062833 gagagaaacaccacactcttacccaaaaccataaaacaataagtttatgg 22062882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 43443104 - 43443145
Alignment:
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||  ||||||||||||||||| ||||||||||||||    
T  43443104 tttctatctgatgtgggacatataacttacacttgcacacaa 43443145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 28226773 - 28226726
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    ||||||||||||||||||||||| |||||| |||| ||||| |||||||    
T  28226773 gagagagacaccacactcttaccaaaaacc-taagacaatgggtttatg 28226726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 39710264 - 39710188
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgc 311  Q
    ||||||||| ||||||| |||||| |||||||||||| || ||||    ||||||||||| | | ||||||||||||    
T  39710264 gtttatggagcctctcatttataacgtgttcaacctctaattttcctagcaatgtgggacttctgactcacacttgc 39710188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 36629365 - 36629232
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||| |  |  ||||||||    
T  36629365 cacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatc 36629266  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||| ||||||    
T  36629265 cgatgtgggacatataactcacacttgaacacaa 36629232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 317
Target Start/End: Complemental strand, 28034392 - 28034224
Alignment:
Q  150 tcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctc 248  Q
    ||||||||||| | |||||| ||| | ||||||| | || ||| ||||||||| ||||||||||||| |||||||||| ||||| ||||||||| | |||    
T  28034392 tcaagggggaccatccacatccagaccagagcaaccgcataagtgagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctc 28034293  T
Q  249 tcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||  ||||||||| ||| ||||||||||| ||||||||||||||||    
T  28034292 tcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaa 28034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 25483464 - 25483331
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||  |   || ||||    
T  25483464 cacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatc 25483365  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||| ||||||||||||||||||||||||||    
T  25483364 cgatgtgagacatataactcacacttgcacacaa 25483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 317
Target Start/End: Original strand, 3244424 - 3244612
Alignment:
Q  129 tttgttgggtcacgaggggagtcaagggggactacccacatacaggcag-agcaatcacacaagcgagagagacaccacactcttacccaaaaccttaag 227  Q
    |||||||||||||||||| |||||||||| ||| |||||||  |||| | | ||| || ||||| |||||||||  |||| ||||||||||||| |||||    
T  3244424 tttgttgggtcacgagggaagtcaagggg-actgcccacatcgaggctggaacaaccatacaagtgagagagacgacacattcttacccaaaactttaag 3244522  T
Q  228 gcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     |||||||||||||| |||||| ||||||||  ||||||||||  |  ||||||||| ||||| ||||||||||||||||||||||||||    
T  3244523 acaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaa 3244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 39792888 - 39793021
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||| ||||||||| |  |  ||||||||    
T  39792888 cacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatc 39792987  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||||||||||||||||||||| ||||||    
T  39792988 tgatgtgggacatataactcacacttgtacacaa 39793021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 307
Target Start/End: Complemental strand, 760345 - 760194
Alignment:
Q  155 ggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcactt 254  Q
    |||||| |||||||| |||  ||||||| |||||||  ||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||    
T  760345 ggggaccacccacatccagtaagagcaaccacacaaatgagagagacaccacacttttacc-aaaatcttaaggcaatgagtttatgggtcctctcactt 760247  T
Q  255 ataaagtgttcaacctccaactttctatccaatgtgggacatataactcacac 307  Q
    |||||||  ||||||| ||  ||||||| | ||||||||||||||||||||||    
T  760246 ataaagttctcaaccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 314
Target Start/End: Original strand, 23556842 - 23557024
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||| ||||||||||||  ||| ||| ||||| || |||||||||||| ||||||||  ||||||||  |||||||||| ||||||| ||||||||    
T  23556842 tgttgggttacgaggggagtcc-gggagaccacccatattcaggcagagcaaccacacaagtaagagagacgtcacactcttatccaaaactttaaggca 23556940  T
Q  231 atgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcaca 314  Q
    |||| ||||||||| |||| | ||||||| |||||||||||||  ||||||||| ||||   |||| |||||||||||||||||    
T  23556941 atgattttatggattctcttatttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacacttgcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 15841388 - 15841494
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||      
T  15841388 agagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctccact 15841487  T
Q  276 tttctat 282  Q
    |||||||    
T  15841488 tttctat 15841494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 52885007 - 52884882
Alignment:
Q  193 gagagagacaccacactcttaccc-aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgg 291  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||  |   || ||||| ||||||    
T  52885007 gagagagacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgg 52884908  T
Q  292 gacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||    
T  52884907 gacatataactcacacttgcacacaa 52884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 317
Target Start/End: Original strand, 15840965 - 15841145
Alignment:
Q  134 tgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||||||||| ||||   |||||| || ||||| ||||||||| ||||| ||||| ||||||||||  ||||||||||||||||| |||| ||||||    
T  15840965 tgggtcacgagggaagtct--ggggaccacgcacattcaggcagagaaatcatacaagtgagagagacaatacactcttacccaaaac-ttaaagcaatg 15841061  T
Q  234 agtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     |||||| |||||||||||||||||| |||||| ||||||  ||||||||  || |||||||||||| ||||| ||| ||||||    
T  15841062 ggtttatagatcctctcacttataaaatgttcagcctccacttttctatctgatatgggacatataattcacatttgtacacaa 15841145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 52884822 - 52884690
Alignment:
Q  186 cacaagcgagagagacaccacactcttaccc-aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcc 284  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||| |||||||| |||||||||||  |   || |||||    
T  52884822 cacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatcc 52884723  T
Q  285 aatgtgggacatataactcacacttgcacacaa 317  Q
     ||||||||||||||||||||||||||||||||    
T  52884722 gatgtgggacatataactcacacttgcacacaa 52884690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 309
Target Start/End: Complemental strand, 34544286 - 34544107
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaa-ccttaaggc 229  Q
    ||||||||||||||||||| ||  |||||| |||||||| | ||  |||||| |  ||||| |||||||| ||||||||||||||||||| |||||||||    
T  34544286 tgttgggtcacgaggggagcca--ggggaccacccacatcctgggggagcaaccgtacaagtgagagagataccacactcttacccaaaaaccttaaggc 34544189  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg--acatataactcacactt 309  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||  ||||||| | ||||| |  | |||||||||||||||    
T  34544188 aatgagtttatgggtcctctcatttataaagtgatcaacctccacttttctattcgatgtgagatatatataactcacactt 34544107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 44620785 - 44620655
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||| |||||||||||||||||||||||||||  ||| |||||||| |||||| ||||||||||||||||||||| |   ||  ||||     
T  44620785 cacaagcaagagagaaaccacactcttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccg 44620687  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  44620686 atgtgggacatataactcacacttgcacacaa 44620655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 50630785 - 50630911
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  50630785 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccg 50630884  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||| ||||||||||||||| ||||||    
T  50630885 atgtaggacatataactcacgcttgca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 22027989 - 22028122
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||| |||||||| |||||||||||      || ||||    
T  22027989 cacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatc 22028088  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||| ||||||||||||||||    
T  22028089 cgatgtgggacatataagtcacacttgcacacaa 22028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 39404146 - 39404013
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||| |||||||||||||||||||||||| || |||||||||||  |||||| ||||||||||||||||||||  |   || |||     
T  39404146 cacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttatt 39404047  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    |||||| |||||||||||||||||||| ||||||    
T  39404046 caatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 34646687 - 34646810
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||| ||||||||| |  |   || ||||| ||||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtggga 34646786  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||||||    
T  34646787 catataactcacacttgtacacaa 34646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 131 - 317
Target Start/End: Original strand, 36608636 - 36608822
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    ||||||||||||||||||| |  |||||||   ||||||  |||| ||| ||| ||||| || ||||||||||||||||||||||||||||||||||| |    
T  36608636 tgttgggtcacgaggggag-cttgggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagac 36608734  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||  |||||||||||||| |||||| | ||||||||| |  |   || ||||| |||| |||||||||||||||||||||||||||    
T  36608735 aatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaa 36608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 4955337 - 4955478
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | ||||||  |||||||| ||||||||||||||||||||||||||||||| |||||||  |||||| |||||||| |||||||||||  |||    
T  4955337 agagcaaccgcacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacct-taac 4955435  T
Q  276 t-ttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    | || ||||| || || ||||||||||||||||||||||||||    
T  4955436 tattttatccgatatgagacatataactcacacttgcacacaa 4955478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 49880278 - 49880160
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||| |||||| |||||||| |||||||||||  |   || ||| ||||||||||    
T  49880278 agagagacaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtggga 49880179  T
Q  294 catataactcacacttgca 312  Q
    |||||||||||||||||||    
T  49880178 catataactcacacttgca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 2740826 - 2740695
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| ||||||||| ||||||||||||  |||||||||||||  || |||||| | |||||| |||||||| |||||||||||  |   ||||||||     
T  2740826 cacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccg 2740727  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  2740726 atgtgggacatataactcacacttgcacacaa 2740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 16888840 - 16888971
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||| |||| |||||||||||| | | |||| |||||||| || ||||||||  |  ||||    
T  16888840 caatcgcacaaacaagagagacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttc 16888939  T
Q  280 tatccaatgtgggacatataactcacacttgc 311  Q
    ||||| ||||||||||||||||||||||||||    
T  16888940 tatccgatgtgggacatataactcacacttgc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 50002544 - 50002421
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||| |||||| ||||| ||||||||||||||  |   || ||||| ||||| ||    
T  50002544 agagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgaga 50002445  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||| ||||    
T  50002444 catataactcacacttgcaaacaa 50002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 55933162 - 55933280
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact-ttctatccaatgtggg 292  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||| |||||||||| |  ||| || ||||| |||| ||    
T  55933162 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacc-cttactattttatccgatgtagg 55933260  T
Q  293 acatataactcacacttgca 312  Q
    ||||||||||||||||||||    
T  55933261 acatataactcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 10246044 - 10245915
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| || |||||||||||||||||||||||||||||||||  || |||||||| |||||| |||||||| |||||||||||  |   || ||||| |    
T  10246044 acaagcaagggagacaccacactcttacccaaaaccttaaggctttgggtttatgg-tcctcttacttataaggtgttcaacctttactcttttatccga 10245946  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    |||||| ||||||||||||||||||||||||    
T  10245945 tgtggggcatataactcacacttgcacacaa 10245915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 22183295 - 22183425
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||| | ||||||||| |||||||| |  |   || ||||| |    
T  22183295 acaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccga 22183394  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    ||||||| |||||||||||||||||||||||    
T  22183395 tgtgggatatataactcacacttgcacacaa 22183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 45496933 - 45496847
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||||| |||||||||||    
T  45496933 cacacaagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacct 45496847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 1731675 - 1731808
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||| |||||| | ||||||  ||||||||||  |   || ||||    
T  1731675 cacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatc 1731774  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||||||||||||||||| ||||||||||    
T  1731775 tgatgtgggacatataactcacatttgcacacaa 1731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 3340933 - 3340802
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca-actttctatcc 284  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||| ||| |||||||  |  ||||| |||     
T  3340933 cacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttc-atct 3340835  T
Q  285 aatgtgggacatataactcacacttgcacacaa 317  Q
     ||| ||||||||||||||||||||||||||||    
T  3340834 gatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 54109038 - 54108910
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || |||||     
T  54109038 cacaagcaagagagacaccacactcttacccaaaac-ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccg 54108940  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||  |||||| ||||||||||||||    
T  54108939 atgtgggac--ataactgacacttgcacacaa 54108910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 3341242 - 3341123
Alignment:
Q  198 agacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacata 297  Q
    ||||| ||||||||||||||||| |||||  ||||||  |||||| |||||| |||||||||||||| |||||  |   || ||||||||||||||||||    
T  3341242 agacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacata 3341143  T
Q  298 taactcacacttgcacacaa 317  Q
    ||||||||||||||||||||    
T  3341142 taactcacacttgcacacaa 3341123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 16889560 - 16889691
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||||||||||  |||||||||||| ||||||||||||||| |||||||| |  ||||||| ||||||| |||||||| || ||||||||  |  ||||    
T  16889560 caatcacacaaggaagagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttc 16889659  T
Q  280 tatccaatgtgggacatataactcacacttgc 311  Q
    ||||| || || ||||||||||||||||||||    
T  16889660 tatccgatttgagacatataactcacacttgc 16889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 36572145 - 36572014
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||| || ||| |||||||| ||||||||| |  |   || ||| |     
T  36572145 cacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcg 36572046  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  36572045 atgtgggacatataactcacacttgtacacaa 36572014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 54017623 - 54017754
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| |||| ||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||| ||||||||  ||||||||||  |   || ||||    
T  54017623 cacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatc 54017722  T
Q  284 caatgtgggacatataactcacacttgcacac 315  Q
      | ||||||||||||||||||||||||||||    
T  54017723 tgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 22028399 - 22028532
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca--actttctatc 283  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||| |||| |||||||||||  |    ||| ||||    
T  22028399 cacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatc 22028498  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||| |||||||||| | ||||||||||||||    
T  22028499 cgatgtaggacatataagtaacacttgcacacaa 22028532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 23817709 - 23817783
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  23817709 cacactagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 39404526 - 39404393
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| ||  |||||||| |||||| |||||||| |||||| ||||  |   || ||||    
T  39404526 cacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatc 39404427  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
      ||||||||||||||||||||||||| ||||||    
T  39404426 tgatgtgggacatataactcacacttgtacacaa 39404393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 54936315 - 54936238
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| || |||||||||||    
T  54936315 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacct 54936238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 41370481 - 41370357
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||| |||||||| || |||||| |  |   || ||||| ||    
T  41370481 caagcaagagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgat 41370382  T
Q  288 gtgggacatataactcacacttgca 312  Q
     ||||||||||||||||||||||||    
T  41370381 ttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 41707502 - 41707625
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| | || | |||||||  |||||||||||  |   || ||||| |||||||    
T  41707502 gagagagacaccacactcttacc-aaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtggg 41707600  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||| ||||||    
T  41707601 acatataactcacacttgtacacaa 41707625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 54741215 - 54741339
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    |||||||| || ||||||||| ||||||||||||| ||||  || ||||| |||||| |||||||| |||||||||||  |  ||||||||| ||||| |    
T  54741215 gagagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgag 54741314  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||| ||||||||||||||||    
T  54741315 acatataattcacacttgcacacaa 54741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 2741180 - 2741069
Alignment:
Q  203 ccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataact 302  Q
    |||||||||||||||||||||||||||||||   |||||| |||||| |||||||| || ||||||||  |   |||||||  |||||||||||||||||    
T  2741180 ccacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataact 2741081  T
Q  303 cacacttgcaca 314  Q
    ||||||||||||    
T  2741080 cacacttgcaca 2741069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 32941153 - 32941284
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||   ||||| | |||||| |||||||||||  |   |||| |||     
T  32941153 cacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccg 32941252  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||  ||||||||||||||||||||| ||||    
T  32941253 atgtaagacatataactcacacttgcagacaa 32941284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 321
Target Start/End: Original strand, 34004615 - 34004748
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| |||||||||  |||||||||| | |||||||||||| ||||||||||||| |||||| ||||||||  ||||||||||   | ||| ||||      
T  34004615 cacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgttcaacct-ttagtttttatcat 34004712  T
Q  286 atgtgggacatataactcacacttgcacacaatagt 321  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34004713 atgtgtgacatataactcacacttgcacacaatagt 34004748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 44621128 - 44621044
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||   ||||| |||||||| |||||||||||    
T  44621128 cacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacct 44621044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 4390131 - 4390262
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||  ||||||||||||||||||||||| |||||| | | | ||||||||| |||||||| |||||||||||  |   || ||||      
T  4390131 cacaagcaagagagacgtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttttatctg 4390230  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    |||||||| || ||||||||||||||||||||    
T  4390231 atgtgggatatgtaactcacacttgcacacaa 4390262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 49303024 - 49302902
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcac--ttataaagtgttcaacctccaactttctatccaatgtgg 291  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||  ||||||  ||||||||||  |  ||| |||   ||||||    
T  49303024 agagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgg 49302925  T
Q  292 gacatataactcacacttgcaca 314  Q
    |||||||||||||||||| ||||    
T  49302924 gacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 11348396 - 11348489
Alignment:
Q  224 taaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||   || ||||  |||| | |||||||||||||| ||||||||||    
T  11348396 taaggcaatgaatatatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaa 11348489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 31691271 - 31691206
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  31691271 gagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataa 31691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 18932787 - 18932863
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| | |||||| || ||||||||    
T  18932787 agagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacct 18932863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 44620481 - 44620362
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||   |||| | |||||| |||||||||||  |   || ||||    
T  44620481 cacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatc 44620382  T
Q  284 caatgtgggacatataactc 303  Q
    | |||||| |||||||||||    
T  44620381 cgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 49076861 - 49076991
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||  ||| |||||||| | |||| || ||||| |||||||||||  |   || || |||    
T  49076861 cacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttac-tataaggtgttcaacctttactattttagcca 49076959  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    || ||| |||||||||||||||||||||||||    
T  49076960 atatggaacatataactcacacttgcacacaa 49076991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 54108665 - 54108578
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg-agtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||| | ||||||| |||| | |||||||| |||||||||||    
T  54108665 cacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacct 54108578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 50459849 - 50459724
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||  |||| |||||||  |||||| ||||||||  ||||||||||  |   || || |    
T  50459849 cacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaac 50459750  T
Q  284 caatgtgggacatataactcacactt 309  Q
    | |||||| |||||||||||||||||    
T  50459749 cgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 54343040 - 54343147
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||       || |||||| |||||||| |||||||||||  |   || ||||| ||    
T  54343040 caagcaagagagacaccacactcttacccaaaaccttaaggcaatg-------gggtcctcttacttataaggtgttcaacctttactattttatccgat 54343132  T
Q  288 gtgggacatataact 302  Q
    |||||||||||||||    
T  54343133 gtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 20825954 - 20825831
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||| |||||||||||||||||||||||||||||| |   |||||||| | |||| | |||||| |||||||||||  |   || ||||| |||||| |    
T  20825954 agagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaa 20825855  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||| ||| ||||||    
T  20825854 catataactcacatttgtacacaa 20825831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 11197345 - 11197296
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  11197345 gagagagacaccacactcttacccaaaaccctaaggcaatgggtttatgg 11197296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 20826335 - 20826223
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| |||||||||||| ||||  ||||||| ||| |||||||| | |||| |||||||| ||||||||| |  |   || ||||| ||||||||    
T  20826335 agagagacatcacactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtggga 20826236  T
Q  294 catataactcaca 306  Q
    |||||||||||||    
T  20826235 catataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 7147702 - 7147796
Alignment:
Q  216 caaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgc 311  Q
    |||||||||||| || || ||||| || |||||||||||| |||||||||||||||||  ||||||  ||||||| ||| | ||||||||||||||    
T  7147702 caaaaccttaagacattgggtttacgggtcctctcactta-aaagtgttcaacctccacttttctaagcaatgtgagacttctaactcacacttgc 7147796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 3271906 - 3271841
Alignment:
Q  192 cgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataa 258  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||| | |||| ||||||||    
T  3271906 cgagagagacac-acactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 23630442 - 23630348
Alignment:
Q  174 gcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    ||||||||| |||||||| ||||| || | |||||| |||||||||  |||||| |  ||||||||||  || ||||||||||||||||||||||    
T  23630442 gcagagcaagcacacaagtgagagggaaatcacacttttacccaaagtcttaagacgttgagtttatgagtcgtctcacttataaagtgttcaac 23630348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 313
Target Start/End: Original strand, 11783528 - 11783701
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggc-agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggc 229  Q
    |||||||||| |||||| | || ||||||| ||||||||  |||| |||||||  | |||||||||||| ||  |||||||||||||||||| ||| |||    
T  11783528 tgttgggtcatgaggggtgcca-gggggaccacccacatctaggctagagcaactatacaagcgagagaaacgacacactcttacccaaaactttatggc 11783626  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcac 313  Q
    |||  || ||||| |||||||||  |||||| | | ||||||| ||||      |||||| |||||||||||||||||||||||    
T  11783627 aataggtgtatgggtcctctcac--ataaagggcttaacctcc-actt------caatgttggacatataactcacacttgcac 11783701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 43827557 - 43827485
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaa 267  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| | |||||| | ||||||    
T  43827557 agagagacaccacactcttatccaaa-ccttaaggcaatgaatttatgggtcctcttatttataaggagttcaa 43827485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 3700485 - 3700360
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||||||  |||||||||| || ||||||| |||||||||||||||||||||        |||| | |||||||| ||||||||| |  |   || ||||    
T  3700485 cacacaaatgagagagacatcatactcttatccaaaaccttaaggcaatgag--------tccttttacttataaggtgttcaacatttactcttttatc 3700394  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||| |||||||||||||||||||||||||||    
T  3700393 cgatgtaggacatataactcacacttgcacacaa 3700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 10396250 - 10396186
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttata 257  Q
    |||||||||||||| |||||||| |||||| |||||||||| |||||||| || |||| ||||||    
T  10396250 gagagagacaccaccctcttacctaaaaccctaaggcaatgggtttatgggtcttctctcttata 10396186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 11706584 - 11706628
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttat 240  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  11706584 agagacgccacactcttacccaaaaccttaaagcaatgagtttat 11706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 41603246 - 41603346
Alignment:
Q  211 ttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttg 310  Q
    ||||||||||||||||| || |  |||||||| || |||||||||||||||| ||||||||||  |||| |  ||| ||||||| | ||||||||| |||    
T  41603246 ttacccaaaaccttaagacactatgtttatgggtcttctcacttataaagtgctcaacctccacttttccaagcaacgtgggacttctaactcacatttg 41603345  T
Q  311 c 311  Q
    |    
T  41603346 c 41603346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 43174625 - 43174501
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca-actttctatccaatgtggg 292  Q
    |||||||| |||||||||||||||| || ||||||  ||  |||||||  |||||| |||||||| |||||||||||  |  |||| ||||  ||||| |    
T  43174625 agagagacgccacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtg 43174526  T
Q  293 acatataactcacacttgcacacaa 317  Q
     ||||||||||||||||| ||||||    
T  43174525 gcatataactcacacttgtacacaa 43174501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 54017750 - 54017865
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg--acatataac 301  Q
    |||||||||||| ||||||||||| ||||| |  ||||| |||||| |||||||| |||||||||||  |   || ||||| |||||||  | |||||||    
T  54017750 cacactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatatataac 54017849  T
Q  302 tcacacttgcacacaa 317  Q
    ||||| ||||||||||    
T  54017850 tcacatttgcacacaa 54017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 6876131 - 6876258
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    ||||| |||||||||  |||||| ||| ||||||||||||| | ||| |||||| | |  |||| |||||||||||||| |||||| | ||| ||||| |    
T  6876131 acaagtgagagagacgtcacacttttatccaaaaccttaagtcgatgcgtttattggt--tctctcttataaagtgttcgacctcc-agtttttatccga 6876227  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    |||  || |||||| ||||||||||||||||    
T  6876228 tgtaagatatataaatcacacttgcacacaa 6876258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 49076510 - 49076609
Alignment:
Q  218 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||| ||||| ||||| |||||| | |||||| |||||||| |||||||||||  |   || ||||| || ||| |||||||||||||||||||||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 51768098 - 51768221
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||| |  ||| ||||||||||||||||| |||||||||||||  |||||| | |||||| ||||||||| |  |   || ||| | || | |||    
T  51768098 agagagacatcgtacttttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatatagga 51768197  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||| ||||||||||    
T  51768198 catataactcacatttgcacacaa 51768221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 45489746 - 45489784
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaa 226  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  45489746 caagcgagagagacaccacactattacccaaaaccttaa 45489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 2891859 - 2891932
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttca 266  Q
    |||| ||||| |||||| | ||||||||||||||| || |  ||||||||||||||| ||||||||||| ||||    
T  2891859 gagaaagacatcacactttaacccaaaaccttaagacattaggtttatggatcctcttacttataaagtattca 2891932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 10396535 - 10396486
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||| |||||||||||| |||||||| |||||||||| ||||||||    
T  10396535 gagagagagaccacactcttatccaaaaccctaaggcaatgggtttatgg 10396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 19504824 - 19504759
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctct 249  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||||||||||   ||||||| ||||||    
T  19504824 cacacaagcaagatagacgccacactcttacccaaaactttaaggcaatagatttatgggtcctct 19504759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 48111735 - 48111812
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    |||||||||||||||||| |||| |||||||||||| ||||  |||||   |||| | |||||||| |||||||||||    
T  48111735 gagagagacaccacactcatacctaaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacct 48111812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 50788014 - 50788071
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||| || | |||||| |||||||||||||||||| | |||||||||||||||||    
T  50788014 agagcaaccaaataagcgacagagacaccacactcttatctaaaaccttaaggcaatg 50788071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43174269 - 43174233
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaa 220  Q
    |||||||| ||||||||||||||||||||||||||||    
T  43174269 cacacaagtgagagagacaccacactcttacccaaaa 43174233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 6975489 - 6975612
Alignment:
Q  189 aagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatg 288  Q
    |||| |||||||| |||||||||||||||||| ||||||  ||||  ||||||  |||||| ||||||||  | ||||||||  |   || ||||  |||    
T  6975489 aagcaagagagacgccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatg 6975588  T
Q  289 tgggacatataactcacacttgca 312  Q
    || ||||||||||||||| |||||    
T  6975589 tgagacatataactcacatttgca 6975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 31249896 - 31249987
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| | ||||||||| | | | || |  |||||||| |||||| |||||||||||||||||| | || |||||||||||    
T  31249896 agagagagaccacactttaacccaaaacttgacgtcattaggtttatgggtcctctaacttataaagtgttcaacattcacctttctatcca 31249987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 31957599 - 31957544
Alignment:
Q  213 acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    |||||||||||||||||| |  |||||||||| |||||||||||| | ||||||||    
T  31957599 acccaaaaccttaaggcattttgtttatggattctctcacttatatattgttcaac 31957544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 9047133 - 9047099
Alignment:
Q  224 taaggcaatgagtttatggatcctctcacttataa 258  Q
    |||| ||||||||||||||||||||||||||||||    
T  9047133 taagacaatgagtttatggatcctctcacttataa 9047099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 18879914 - 18879852
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttca 266  Q
    ||||||||||||||||||||||||| |||  |||||| | || ||| |||||||| |||||||    
T  18879914 cacactcttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 1868158 - 1868121
Alignment:
Q  205 acactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  1868158 acactcttacccaaaactttaaggcaatgggtttatgg 1868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 12197438 - 12197373
Alignment:
Q  252 cttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||||| || ||||| ||  |||||||   ||||||||| ||||||||||||||||||||||    
T  12197438 cttataaagtattgaaccttcacttttctatttgatgtgggacctataactcacacttgcacacaa 12197373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 29802637 - 29802580
Alignment:
Q  216 caaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    ||||||||||||||| || |||||||| |||||||| || | ||||| ||||||||||    
T  29802637 caaaaccttaaggcattgggtttatgggtcctctcagttgtcaagtgctcaacctcca 29802580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 34946150 - 34946187
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||||||||||||||||||||| | |||||||    
T  34946150 gagagagacaccacactcttacccaaaatcctaaggca 34946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 44621458 - 44621421
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  44621458 tatcccatgttggacatataactcacacttgcacacaa 44621421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 51681650 - 51681617
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  51681650 acaccacactcttacccaaaatcttaaggcaatg 51681617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 922536 - 922488
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||||||||||||||| ||||| || |||| ||||| ||||||||    
T  922536 agagagacaccacactcttatccaaacccctaagacaatgggtttatgg 922488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 41707278 - 41707318
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    |||||||| |||||||| |||||||||||||||||| ||||    
T  41707278 gagagagataccacacttttacccaaaaccttaaggtaatg 41707318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 36522269 - 36522392
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||| |||||| | |||||||||||||||| |||||||| ||||  ||||||||||    
T  36522269 cacaagtgagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttttctatcca 36522368  T
Q  286 atgtgggacatataactcacactt 309  Q
    ||||| ||||||||||||||||||    
T  36522369 atgtgagacatataactcacactt 36522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 130 - 298
Target Start/End: Complemental strand, 31509913 - 31509745
Alignment:
Q  130 ttgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaa-ccttaagg 228  Q
    |||||||||||||||| ||| || ||||||| |||||||| || |||| |||| |  ||||||||||||||||||||| ||||||| |||| ||| ||||    
T  31509913 ttgttgggtcacgaggagagcca-gggggaccacccacatccatgcagggcaaccgtacaagcgagagagacaccacattcttaccaaaaaacctcaagg 31509815  T
Q  229 caatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatat 298  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||  ||||||||| ||||| |||||||    
T  31509814 caatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatat 31509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 317
Target Start/End: Complemental strand, 31509744 - 31509618
Alignment:
Q  192 cgagagagacaccacactcttacccaaaa-ccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtg 290  Q
    |||||||||||| ||| ||||||| |||| ||| |||||||||||||||||  ||||||||||||||||||| ||||||||||  ||||||||| |||||    
T  31509744 cgagagagacactacattcttaccaaaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtg 31509645  T
Q  291 ggacatataactcacacttgcacacaa 317  Q
     ||||||||||||||||||||||||||    
T  31509644 agacatataactcacacttgcacacaa 31509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 40296347 - 40296477
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| |||||||||||      || |||||     
T  40296347 cacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccg 40296446  T
Q  286 atgtgggacatataactcacacttgcacaca 316  Q
    |||||||||||||||||||||||||||||||    
T  40296447 atgtgggacatataactcacacttgcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 176 - 317
Target Start/End: Original strand, 26074168 - 26074309
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| || ||| | |||||||||||  |      
T  26074168 agagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttact 26074267  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||| ||||| ||||| ||||||||||||||||||||||||||    
T  26074268 tttttatccgatgtgtgacatataactcacacttgcacacaa 26074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 26074748 - 26074607
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |      
T  26074748 agagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttact 26074649  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     || ||||| || ||| |||||||||||||||||| ||||||    
T  26074648 cttttatccgatatggaacatataactcacacttgtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 36568606 - 36568730
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||| || || |||||||||||| ||||||||| |  |  ||||||||| |||||||    
T  36568606 gagagagacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtggg 36568705  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||||||||||||||||||||    
T  36568706 acatataactcacacttgcacacaa 36568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 41632908 - 41632777
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||| || |||||||| |||||| |||||||| |||||||||||  |  |||||||||     
T  41632908 cacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccg 41632809  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||| ||||||||||| ||||||||||||||    
T  41632808 atgtgagacatataacttacacttgcacacaa 41632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 36521919 - 36522059
Alignment:
Q  177 gagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaact 276  Q
    |||||| |||||||  ||||||||   |||||||||||||||||||||||||||||  |||||||| |||||||| ||| | ||||||||||||| |  |    
T  36521919 gagcaaccacacaaatgagagagatgacacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaactt 36522018  T
Q  277 ttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    |||||||  |||||||||||||||||||||||||| |||||    
T  36522019 ttctatctgatgtgggacatataactcacacttgcgcacaa 36522059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 1028549 - 1028680
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||  ||  |||||||| |||||| |||||||||||||||| |||  |  |||||||||     
T  1028549 cacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttacttttctatccg 1028648  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| ||||||    
T  1028649 atgtgggacatataactcacacttgtacacaa 1028680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 13415792 - 13415923
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||  |||||||| |||||| |||||||| |||||||||||  |    | |||||     
T  13415792 cacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccg 13415891  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  13415892 atgtgggacatataactcacacttgcacacaa 13415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 34753057 - 34753188
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||| || ||| |||||||| ||||||||| |  |  ||||||||||    
T  34753057 cacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatcca 34753156  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||| ||| ||||||    
T  34753157 atgtgggacatataacttacatttgtacacaa 34753188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 624322 - 624196
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||||| || ||| |||||||| |||||||||||  |   || ||| ||    
T  624322 cacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttataca 624223  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  624222 atgtgggacatataactcacacttgca 624196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 18603150 - 18603276
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  18603150 cacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 18603249  T
Q  284 caatgtgggacatataactcacacttg 310  Q
      |||||||||||||||||||||||||    
T  18603250 tgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 15370231 - 15370094
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||  ||  ||||||| |||||| ||||||||  ||||||||||  |   ||     
T  15370231 caatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattt 15370132  T
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||| | ||||||||||||||||||||||||||||||||    
T  15370131 tattcgatgtgggacatataactcacacttgcacacaa 15370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 36492247 - 36492380
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||| |||| |||||| | |||||| |||||||| |||||||||||  |   || ||||    
T  36492247 cacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatc 36492346  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | ||||||||||||||||||||||||||| ||||    
T  36492347 cgatgtgggacatataactcacacttgcaaacaa 36492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 27502066 - 27502194
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| |||||||||||||||| ||||| |||| |||||||||||  |||||||| |||||| |||||||| ||||| |||||  |   || ||||    
T  27502066 cacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatc 27502165  T
Q  284 caatgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||||    
T  27502166 caatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 35150134 - 35150000
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||| || ||||||||||||||||| ||||||||||||||||| |||||  ||||||| || ||| |||||||| |||||||||||  |   || ||||    
T  35150134 cacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatc 35150036  T
Q  284 caatgtgggacatataactcacacttgcacacaata 319  Q
    | ||||||||||||||||||||||||||||||||||    
T  35150035 cgatgtgggacatataactcacacttgcacacaata 35150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 299614 - 299484
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaa 286  Q
    |||||| | |||||| |||||||||||| |||||||||||||| |||||||||||| || ||| |||||||| |||||||||||  |   || ||||| |    
T  299614 acaagcaatagagacgccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccga 299515  T
Q  287 tgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||| |||||    
T  299514 tgtgggacatataactcacacttgcgcacaa 299484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 6500576 - 6500451
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||  | |||||| |||||||| |||||||||||  |   || |||||     
T  6500576 cacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccg 6500477  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||| ||||||||||||||||||||||    
T  6500476 atgt-ggacatataactcacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 9498694 - 9498812
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||| |||||||||||  |   |||||||  ||||| ||    
T  9498694 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgaga 9498793  T
Q  294 catataactcacacttgca 312  Q
    ||||||||||||| |||||    
T  9498794 catataactcacatttgca 9498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 11417003 - 11417138
Alignment:
Q  180 caatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttc 279  Q
    ||||| ||||||| ||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||  |   ||     
T  11417003 caatcccacaagcaagagagagatcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattt 11417102  T
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||| ||||||||||  |||||||||||||    
T  11417103 tatccgatgtggaacatataact--cacttgcacacaa 11417138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 41170762 - 41170640
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||  ||||||||||  |   || ||||    
T  41170762 cacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatc 41170663  T
Q  284 caatgtgggacatataactcaca 306  Q
    | |||||||||||||||||||||    
T  41170662 cgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 3295045 - 3295176
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||| | ||||||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||||||| |||||||||||  |   || ||||    
T  3295045 cacacaaccaagagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatc 3295144  T
Q  284 caatgtgggacatataactcacacttgcacaca 316  Q
    | ||||||||||||| |||||||||||||||||    
T  3295145 cgatgtgggacatat-actcacacttgcacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 6224307 - 6224191
Alignment:
Q  201 caccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataa 300  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||| |||||||| |||||||||||  |   || ||||| | |||||||||||||    
T  6224307 caccacactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataa 6224208  T
Q  301 ctcacacttgcacacaa 317  Q
    |||||||||| ||||||    
T  6224207 ctcacacttgtacacaa 6224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 623944 - 623818
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| ||  || |||| |||||||||||||||  |   || |||||     
T  623944 cacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactattatatccg 623845  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    ||||| |||||||||||||||||||||    
T  623844 atgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 6500940 - 6500823
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| | | |||||| |||||||||||  |   || ||||| |||| |||    
T  6500940 agagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-gga 6500842  T
Q  294 catataactcacacttgca 312  Q
    |||||||||||||||||||    
T  6500841 catataactcacacttgca 6500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 33747889 - 33747783
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| || |||||  |   || ||||| ||||||||    
T  33747889 agagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtggga 33747790  T
Q  294 catataa 300  Q
    |||||||    
T  33747789 catataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 312
Target Start/End: Complemental strand, 32487501 - 32487394
Alignment:
Q  204 cacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactc 303  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| |||||| | |||||||||||  |   || ||||| ||||||||||||||||||    
T  32487501 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttactattttatccgatgtgggacatataactc 32487403  T
Q  304 acacttgca 312  Q
    |||||||||    
T  32487402 acacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 12662684 - 12662815
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||  ||||||| |  ||| ||||||||| ||||||||||  |   || |||||     
T  12662684 cacaagcaagaaaggcaccacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccg 12662783  T
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  12662784 atgtgggacatataactcacacttgcacacaa 12662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 25328053 - 25327938
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||| |||||| |||||||| ||||||||| |  |   || ||||| |||| |||    
T  25328053 agagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtagga 25327954  T
Q  294 catataactcacactt 309  Q
    ||||||||||||||||    
T  25327953 catataactcacactt 25327938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 26590940 - 26591026
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacct 270  Q
    ||||| || ||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||    
T  26590940 cacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacct 26591026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 3295375 - 3295506
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||  |||||||| |||||| |||||||| |||||||||||  |   || ||||    
T  3295375 cacacaagcaagagagacaacacactcttacc-aaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 3295473  T
Q  284 caatgtgggacatataactcacacttgcacacaa 317  Q
    | |||||| |||||| |||||||||| |||||||    
T  3295474 cgatgtggaacatat-actcacacttccacacaa 3295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 307
Target Start/End: Complemental strand, 38427673 - 38427553
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    |||||| |||||||||  ||||||||||| |||||||||||| |||||  || |||| |||||| ||||||||  ||||||||||  |  ||||||||||    
T  38427673 cacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttctatcca 38427575  T
Q  286 atgtgggacatataactcacac 307  Q
    ||||||||||||||||||||||    
T  38427574 atgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 26075201 - 26075325
Alignment:
Q  194 agagagacaccacactctt-acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggg 292  Q
    ||||||||  ||||||||| ||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||| ||||| |    
T  26075201 agagagacgacacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgag 26075300  T
Q  293 acatataactcacacttgcacacaa 317  Q
    |||||||| ||||||||| ||||||    
T  26075301 acatataaatcacacttgtacacaa 26075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 26074802 - 26074945
Alignment:
Q  175 cagagcaatcacacaagcgagagagacaccacactctt-acccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    |||||||| |||||  || |||||||| |||||||||| ||||||||||||||| ||||  |||||||| |||||  |||||||  |||||||||||  |    
T  26074802 cagagcaaccacacttgcaagagagacgccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaaccttta 26074901  T
Q  274 actttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
       || ||||| ||||||||||||||||||||||||| ||||||    
T  26074902 ctcttttatccgatgtgggacatataactcacacttgtacacaa 26074945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 36527125 - 36527196
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcactta 255  Q
    |||||||| |||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  36527125 cacacaagtgagagagacagcacactcttatccaaaatcttaaggcaatgcgtttatggatcctctcactta 36527196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 42405638 - 42405759
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||  |||| | |||| ||| |||||||||||  |   || ||||| |||| |||||    
T  42405638 agagacaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggaca 42405737  T
Q  296 tataactcacacttgcacacaa 317  Q
    ||||||||||||||| ||||||    
T  42405738 tataactcacacttgtacacaa 42405759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 15370520 - 15370446
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    |||||||| |||||||||||| |||||||||||||| ||| |||||||| |||||| |||||||| |||||||||    
T  15370520 agagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaac 15370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 2411123 - 2411010
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    ||||| || |||||||||| ||||||||||||||||| ||||||||| | |||| ||||| ||  |||||||| |  |  | |||||||||||| |||||    
T  2411123 agagaaactacactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggaca 2411024  T
Q  296 tataactcacactt 309  Q
    ||||||||||||||    
T  2411023 tataactcacactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 317
Target Start/End: Original strand, 9510544 - 9510683
Alignment:
Q  178 agcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactt 277  Q
    ||||| ||||||||  |||||||||| | | | ||||| ||||  |||||||| |  |||||||| ||||||||||||||||    ||||||||||  ||    
T  9510544 agcaaccacacaagtaagagagacactatatttttacctaaaattttaaggcattaggtttatggctcctctcacttataaatgactcaacctccacttt 9510643  T
Q  278 tctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||||  ||||||||||||||||| |||||||    
T  9510644 tctattcaatgtgaaacatataactcacactttcacacaa 9510683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 32446010 - 32445935
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtg 262  Q
    ||||| ||||||||||||||||| | |||||||||||||||||  || |||||||| ||||||||||| |||||||    
T  32446010 acaagtgagagagacaccacactttaacccaaaaccttaaggcgttgggtttatgggtcctctcacttgtaaagtg 32445935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 312
Target Start/End: Original strand, 5723823 - 5723949
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcca 285  Q
    ||||||| |||||||||| | |||||| |||||||||||||| |||| | || |||| | |||| || ||||| ||||||||| |  |   || |||||     
T  5723823 cacaagcaagagagacactatactctttcccaaaaccttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattttatccg 5723922  T
Q  286 atgtgggacatataactcacacttgca 312  Q
    |||||||||||||||||||||||||||    
T  5723923 atgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 24489248 - 24489367
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggaca 295  Q
    |||||| |||||||||||| ||||| |||||||||||| |||||||| |  ||| ||| |||| ||||| |||||     ||||||||  ||||||||||    
T  24489248 agagacgccacactcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggaca 24489345  T
Q  296 tataactcacacttgcacacaa 317  Q
    ||||||||||||||| ||||||    
T  24489346 tataactcacacttgaacacaa 24489367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 13042658 - 13042609
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  13042658 gagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgg 13042609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 29549285 - 29549413
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatc 283  Q
    |||| |||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| || ||| |||||||  ||||||| |||  |   || ||||    
T  29549285 cacataagcaagagagacgccacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatc 29549384  T
Q  284 caatgtgggacatataactcacacttgca 312  Q
      || ||| ||||||||||||||||||||    
T  29549385 tgatatggaacatataactcacacttgca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 301079 - 301030
Alignment:
Q  184 cacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 233  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  301079 cacacaagcaagagagacaccacactcttaccaaaaatcttaaggcaatg 301030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 309
Target Start/End: Original strand, 3622890 - 3623035
Alignment:
Q  155 ggggactacccacatacaggcagagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcactt 254  Q
    |||||| |||||||| ||||||| |||| ||||| || || ||||||  |||||||||||| |||| |||||||||        |||||| || ||||||    
T  3622890 ggggaccacccacatccaggcagggcaaccacactagtgacagagacgtcacactcttacctaaaa-cttaaggca--------atggattctttcactt 3622980  T
Q  255 ataaagtgttcaacctccaactttctatccaatgtgggacatataactcacactt 309  Q
    ||| |||||||||| ||||  ||||||||| || |  ||||||||||||||||||    
T  3622981 atagagtgttcaacttccacttttctatccgatttaagacatataactcacactt 3623035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 19275653 - 19275570
Alignment:
Q  187 acaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctc 271  Q
    |||||||||| |||| ||||| |||||||||||| |||||| |||||| ||||||| || |||  ||||| ||||||||||||||    
T  19275653 acaagcgagacagacgccacaatcttacccaaaatcttaagacaatgaatttatgggtcttcttccttat-aagtgttcaacctc 19275570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 26900049 - 26900089
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaa 226  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  26900049 cacaagcaagagagacaccacactcttacccaaaaccttaa 26900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 42508707 - 42508607
Alignment:
Q  217 aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacaca 316  Q
    ||||||||||||||||| |||||||  |||||| |||||| |  |||| |||||  |  ||||||||| |||||||| |||||| ||||||||| |||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacaca 42508608  T
Q  317 a 317  Q
    |    
T  42508607 a 42508607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 13042823 - 13042784
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaat 232  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13042823 gagagagacaccacattcttacccaaaaccttaaggcaat 13042784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 13112821 - 13112782
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaat 232  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13112821 gagagagacaccacattcttacccaaaaccttaaggcaat 13112782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 26074395 - 26074320
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttg 310  Q
    |||||||| |||||| |||||||| |||||||| ||  |  ||||||||  |||||||||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 795264 - 795306
Alignment:
Q  186 cacaagcgagagagacaccacactcttacccaaaaccttaagg 228  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  795264 cacaagcaagagagacaccacactcttacctaaaaccttaagg 795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 13112656 - 13112607
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||| |||||||||||||||| ||||||||||||| ||||| ||||||||    
T  13112656 gagaaagacaccacactcttatccaaaaccttaagacaatgggtttatgg 13112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 34103666 - 34103625
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  34103666 acaccacactcttattcaaaaccttaaggcaatgagtttatg 34103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 36389015 - 36389064
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||| |||||||||||| |||||||||| ||||||| |||||||||||    
T  36389015 gagagaaacaccacactctgacccaaaaccctaaggcactgagtttatgg 36389064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 13786040 - 13786116
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacc 269  Q
    |||||||||| |||||||||| |||||| |||||| ||||   |||| || || ||| |||||||||||||||||||    
T  13786040 gagagagacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaacc 13786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 35150773 - 35150742
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  35150773 atgtgggacatataactcacacttgcacacaa 35150742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 35151064 - 35151033
Alignment:
Q  286 atgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||||||||||    
T  35151064 atgtgggacatataactcacacttgcacacaa 35151033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 5963795 - 5963765
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggca 230  Q
    |||||||||||||||||||||||||||||||    
T  5963795 acaccacactcttacccaaaaccttaaggca 5963765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 41341567 - 41341525
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatgg 242  Q
    |||||||| ||||||| |||||||||||||||||||| |||||    
T  41341567 acaccacattcttaccaaaaaccttaaggcaatgagtgtatgg 41341525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 10351210 - 10351330
Alignment:
Q  193 gagagagacaccacactcttacccaaaacc--ttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtg 290  Q
    |||| ||||| |||||| ||||||||||    ||||| |||||||||||||| || | |||| |||||| ||||||||||||   ||| || ||||||||    
T  10351210 gagatagacatcacacttttacccaaaaatatttaagacaatgagtttatgggtcatttcacgtataaaatgttcaacctccgcttttttagccaatgtg 10351309  T
Q  291 ggacatataactcacacttgc 311  Q
     ||| | ||||| ||||||||    
T  10351310 agacttctaacttacacttgc 10351330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 36527205 - 36527246
Alignment:
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||||  ||||||||||||||||||||||||| ||||||    
T  36527205 tttctatctgatgtgggacatataactcacacttgtacacaa 36527246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 41340391 - 41340350
Alignment:
Q  200 acaccacactcttacccaaaaccttaaggcaatgagtttatg 241  Q
    |||||||||||||| |||||| ||||||||||||||| ||||    
T  41340391 acaccacactcttatccaaaatcttaaggcaatgagtgtatg 41340350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 41635233 - 41635305
Alignment:
Q  196 agagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaac 268  Q
    ||||| || ||||||||||| ||||  ||||| |||||  |||||||||||||| | |||||| |||||||||    
T  41635233 agagatactacactcttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaac 41635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 5475 - 5352
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||| |||||| |||||||| |||||||||||  |   |||||||| |||||| |    
T  5475 agagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaa 5376  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  5375 catataactcacacttgcacacaa 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 5118 - 4977
Alignment:
Q  176 agagcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaac 275  Q
    ||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | | ||||||||  | || |||||  |      
T  5118 agagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttact 5019  T
Q  276 tttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
     |||| ||| ||||| ||||||||| ||||||||||||||||    
T  5018 gttctctccgatgtgagacatataattcacacttgcacacaa 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 310
Target Start/End: Original strand, 548 - 670
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || || || ||    
T  548 caagcaagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgat 647  T
Q  288 gtgggacatataactcacacttg 310  Q
    |||||||||||||||||||||||    
T  648 gtgggacatataactcacacttg 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 224 - 300
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgca 312  Q
    |||||||| |||||| |||||||| |||||||||||  |   || ||||| |||||||||||||||||||||||||||    
T  224 gtttatgg-tcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 1146 - 1269
Alignment:
Q  194 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||  |||| |  ||||||| |||||||||||  |   || ||||||||||||||    
T  1146 agagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtggga 1245  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||| ||||||    
T  1246 catataactcacacttgtacacaa 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 1730 - 1802
Alignment:
Q  193 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttc 265  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  1730 gagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 3111 - 3148
Alignment:
Q  280 tatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  3111 tatccgatgtgggacatataactcacacctgcacacaa 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 317
Target Start/End: Complemental strand, 39635 - 39452
Alignment:
Q  131 tgttgggtcacgaggggagtcaagggggactacccacatacaggcagagcaatcacacaagcgagagagacacca-cactcttacccaaaaccttaaggc 229  Q
    ||||||||||| ||||||| || |||| ||||||||||| |||||||| ||| ||||||||| |||||||| ||| |||| ||||||||||| |||||||    
T  39635 tgttgggtcactaggggagcca-ggggaactacccacat-caggcagatcaaccacacaagcaagagagacgccaacacttttacccaaaac-ttaaggc 39539  T
Q  230 aatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||   |||||| | ||||||||||||||| | ||||||||||||  ||||||| |  |||| ||||||||||||||||||| ||||||    
T  39538 aacatgtttatagttcctctcacttataaggagttcaacctccacttttctatgc-gtgtgagacatataactcacacttgaacacaa 39452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 39972 - 39833
Alignment:
Q  178 agcaatcacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactt 277  Q
    |||||||| ||||||||||||||||||||| | ||| ||||||  |||||| ||| |||||||   || |||||||||||||| || ||||| |||  ||    
T  39972 agcaatcatacaagcgagagagacaccacatttttaaccaaaattttaaggtaataagtttatatctcatctcacttataaagagtccaaccaccacttt 39873  T
Q  278 tctatccaatgtgggacatataactcacacttgcacacaa 317  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  39872 tctatccgatgtgggacatataactcacacttgaacacaa 39833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 5523 - 5391
Alignment:
Q  186 cacaagcgagagagacaccacactcttaccc-aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatcc 284  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||| ||||  ||||||||  ||||| |||||||| |||||||||||  |   || |||||    
T  5523 cacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatcc 5424  T
Q  285 aatgtgggacatataactcacacttgcacacaa 317  Q
     |||| |||||||||||||||||||||||||||    
T  5423 gatgtaggacatataactcacacttgcacacaa 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 5898 - 5772
Alignment:
Q  196 agagacaccacactcttacccaaaac-----cttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtg 290  Q
    ||||||||||||||||||| |||||      |||||||||||| |||||||| |||||| |||||||| |||||||||||  |   || ||||| |||||    
T  5898 agagacaccacactcttactcaaaatttaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 5799  T
Q  291 ggacatataactcacacttgcacacaa 317  Q
     ||||||||||||||||||||||||||    
T  5798 cgacatataactcacacttgcacacaa 5772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 17496 - 17619
Alignment:
Q  196 agagacaccacactcttacccaaaa--ccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtggga 293  Q
    |||||||||| ||||||||||||||  ||||||||| ||| |||||||| |||||| ||||| || |||||||||||  |   || ||||  ||||| ||    
T  17496 agagacaccatactcttacccaaaaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtga 17595  T
Q  294 catataactcacacttgcacacaa 317  Q
    ||||||||||||||||||||||||    
T  17596 catataactcacacttgcacacaa 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 47484 - 47356
Alignment:
Q  188 caagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccaat 287  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||||| |||||||||| |||| |||||||| |||||||| ||  |   || ||||  ||    
T  47484 caagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggat 47385  T
Q  288 gtgggacatataactcacacttgcacaca 316  Q
    ||| ||||| ||| |||||||||||||||    
T  47384 gtgagacatttaattcacacttgcacaca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 3172 - 3117
Alignment:
Q  218 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgttcaacctcca 273  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||    
T  3172 aaaccttaaggcaatgagtttattgatgctctcacttataaagtgtataacctcca 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 10192 - 10237
Alignment:
Q  218 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgt 263  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||    
T  10192 aaaccttaaggcaatgagtttattgatgctgtcacttataaagtgt 10237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 10192 - 10267
Alignment:
Q  235 gtttatggatcctctcacttataaagtgttcaacctccaactttctatccaatgtgggacatataactcacacttg 310  Q
    |||||||| |||||| |||||||| ||||||||| |  | | || ||||| ||||| |||||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttg 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University