View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11954_low_9 (Length: 370)

Name: NF11954_low_9
Description: NF11954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11954_low_9
NF11954_low_9
[»] chr5 (4 HSPs)
chr5 (17-136)||(31167563-31167682)
chr5 (177-229)||(31167444-31167496)
chr5 (19-141)||(22188009-22188132)
chr5 (70-141)||(30785050-30785122)
[»] chr7 (7 HSPs)
chr7 (70-137)||(28537399-28537467)
chr7 (24-146)||(4059709-4059833)
chr7 (71-147)||(46373672-46373749)
chr7 (24-147)||(7265329-7265455)
chr7 (70-144)||(40211955-40212030)
chr7 (25-104)||(23563426-23563507)
chr7 (70-141)||(2657900-2657972)
[»] chr1 (3 HSPs)
chr1 (111-155)||(6607800-6607844)
chr1 (70-163)||(17600562-17600656)
chr1 (70-146)||(40019241-40019318)
[»] chr4 (4 HSPs)
chr4 (63-157)||(29597462-29597557)
chr4 (70-137)||(45994531-45994599)
chr4 (19-147)||(17135096-17135226)
chr4 (70-141)||(38844232-38844304)
[»] chr3 (7 HSPs)
chr3 (70-160)||(40294598-40294689)
chr3 (30-137)||(48210982-48211092)
chr3 (73-141)||(48204378-48204447)
chr3 (114-147)||(28967291-28967324)
chr3 (111-147)||(1386855-1386891)
chr3 (70-138)||(39142962-39143030)
chr3 (70-137)||(54877842-54877910)
[»] chr2 (7 HSPs)
chr2 (63-165)||(17183767-17183869)
chr2 (74-147)||(17627558-17627632)
chr2 (70-141)||(12133294-12133366)
chr2 (74-141)||(18105430-18105498)
chr2 (72-137)||(31579295-31579361)
chr2 (70-147)||(33756976-33757054)
chr2 (70-141)||(7157503-7157575)
[»] chr8 (2 HSPs)
chr8 (63-155)||(13468802-13468895)
chr8 (70-141)||(15682934-15683006)
[»] chr6 (6 HSPs)
chr6 (63-157)||(21910194-21910289)
chr6 (17-101)||(29986794-29986880)
chr6 (72-141)||(15614639-15614709)
chr6 (70-147)||(25084033-25084111)
chr6 (70-137)||(12411157-12411225)
chr6 (117-157)||(17177146-17177186)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 31167682 - 31167563
Alignment:
Q  17 cagagattaatcactcgagtcttgtgagacccaaacaaacggcaaactctcttagagttttaacgttgttatatgcccaagactggatccgaaccaagac 116  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  31167682 cagagattaatcactcgagtcttgtgagacccaaacgaacggtaaattctcttagatttttaacgttgttatatgcccaagactggatccgaaccaaaac 31167583  T
Q  117 cttgattaagttagaagaga 136  Q
    ||||||||||||||||||||    
T  31167582 cttgattaagttagaagaga 31167563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 31167496 - 31167444
Alignment:
Q  177 cttatagtttagaaggcttatcataattttgtttctcattattagcttcccaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31167496 cttatagtttagaaggcttatcataattttgtttctcattattagcttcccaa 31167444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 22188009 - 22188132
Alignment:
Q  19 gagattaatcactcgagtcttgtgagacccaaacaaacggcaaactctcttagagttttaacgttgttatatgcccaagactggatccgaa-ccaagacc 117  Q
    |||| ||||| ||| ||| ||||| |||||||| |  ||||| ||||||  |||||||||||| |||| |||||||||| |||||| | || |||| |||    
T  22188009 gagactaatccctctagtattgtgggacccaaataggcggcagactctccaagagttttaacgctgttgtatgcccaaggctggattcaaacccaatacc 22188108  T
Q  118 ttgattaagttagaagagactcgt 141  Q
    ||| ||||||||||||||| ||||    
T  22188109 ttggttaagttagaagagattcgt 22188132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 30785050 - 30785122
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaacc-aagaccttgattaagttagaagagactcgt 141  Q
    ||||||||||||||| |  ||| ||||  |||||| |||||| ||||| ||||||||| ||||||||||||||    
T  30785050 agagttttaacgttgctgcatgtccaaagctggattcgaacccaagacattgattaagctagaagagactcgt 30785122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 28537467 - 28537399
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagac 137  Q
    |||||||||||||||||  ||||||||| |||||| |||| |||| |||||||||||||||||||||||    
T  28537467 agagttttaacgttgttgcatgcccaaggctggattcgaacccaaaaccttgattaagttagaagagac 28537399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 4059709 - 4059833
Alignment:
Q  24 taatcactcgagtcttgtgagacccaaacaaacggcaaa--ctctcttagagttttaacgttgttatatgcccaagactggatccgaaccaagaccttga 121  Q
    ||||| ||||||||||||| |||||||| |||||| |||  |||||| |||||||||||| ||||  |||| |||| ||| || |||||  ||||||||     
T  4059709 taatccctcgagtcttgtgtgacccaaataaacggaaaactctctctaagagttttaacgatgttgcatgctcaaggctgtattcgaactcagaccttgg 4059808  T
Q  122 ttaagttagaagagactcgtgtcat 146  Q
    ||||  || |||||||  |||||||    
T  4059809 ttaaactaaaagagacatgtgtcat 4059833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 46373749 - 46373672
Alignment:
Q  71 gagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgtgtcatc 147  Q
    ||||||||||| |||| ||||||||||||||||| |||| ||| || |||| ||||| |||||||||| || ||||||    
T  46373749 gagttttaacgatgttgtatgcccaagactggattcgaacccaggatcttgcttaagctagaagagacccgcgtcatc 46373672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 7265329 - 7265455
Alignment:
Q  24 taatcactcgagtcttgtgagacccaaacaaacggcaaactctc--ttagagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttg 120  Q
    |||||| |||||| ||||| ||||||||  | | ||||||||||  | ||||||||||| | | |  |||||||||||| |||||||| |||| || |||    
T  7265329 taatcattcgagtattgtgggacccaaatgagcagcaaactctccctaagagttttaacatcgctgcatgcccaagactagatccgaacccaaaactttg 7265428  T
Q  121 attaagttagaagagactcgtgtcatc 147  Q
     ||||| |||||||||| |||||||||    
T  7265429 gttaagctagaagagacccgtgtcatc 7265455  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 40212030 - 40211955
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgtgtc 144  Q
    |||||||||||||||||  ||||||||||||||||  ||| ||| ||||||||||||| || |||| |||| ||||    
T  40212030 agagttttaacgttgttgcatgcccaagactggatttgaacccatgaccttgattaagctaaaagaaactcatgtc 40211955  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 23563507 - 23563426
Alignment:
Q  25 aatcactcgagtcttgtgagacccaaacaaacggcaaactctctt--agagttttaacgttgttatatgcccaagactggat 104  Q
    ||||| ||||| ||||| |||| |||| |||||||||||||||||  | | |||||| ||||||| ||||| ||||||||||    
T  23563507 aatcattcgagccttgtaagactcaaataaacggcaaactctctttaaaatttttaaagttgttacatgcctaagactggat 23563426  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 2657900 - 2657972
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgt 141  Q
    ||||||||||||||| |  ||||||||| ||| ||  |||| || | ||||||||||||||||||||||||||    
T  2657900 agagttttaacgttgctgcatgcccaaggctgtatttgaactcagggccttgattaagttagaagagactcgt 2657972  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 6607800 - 6607844
Alignment:
Q  111 caagaccttgattaagttagaagagactcgtgtcatccaatctaa 155  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  6607800 caagaccatgattaagttagaagagactcgtgtcatcccatctaa 6607844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 17600562 - 17600656
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaacc-aagaccttgattaagttagaagagactcgtgtcatccaatctaaacactttt 163  Q
    |||||||||||| ||||  |||| |||| ||| || | |||| ||||||||| ||||| |||||||||| |||||||||  |||||||| |||||    
T  17600562 agagttttaacgatgttgcatgctcaaggctgaattctaacccaagaccttggttaagctagaagagacccgtgtcatctcatctaaacgctttt 17600656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 40019318 - 40019241
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaacc-aagaccttgattaagttagaagagactcgtgtcat 146  Q
    ||||||||||||||| |  ||  ||||| ||| || |||||| || ||||||||||||||||||||||||||| ||||    
T  40019318 agagttttaacgttgctgcatatccaaggctgaattcgaacccaaaaccttgattaagttagaagagactcgtatcat 40019241  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 29597557 - 29597462
Alignment:
Q  63 ctctcttagagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgtgtcatccaatctaaac 157  Q
    |||||| |||||||||||||||||  ||||||||||||| ||  |||| |||||||||  |||||||| || | ||||||||||||  ||||||||    
T  29597557 ctctctaagagttttaacgttgttgcatgcccaagactgaatttgaactcaagacctttgttaagttaaaaaaaactcgtgtcatctcatctaaac 29597462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 45994599 - 45994531
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagac 137  Q
    |||||||||||||||||  ||||||||| |||||| |||| ||| ||||||| ||||| ||||||||||    
T  45994599 agagttttaacgttgttgcatgcccaaggctggattcgaatccaggaccttggttaagctagaagagac 45994531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 17135226 - 17135096
Alignment:
Q  19 gagattaatcactcgagtcttgtgagacccaaacaaacggcaaactctc--ttagagttttaacgttgttatatgcccaagactggatccgaaccaagac 116  Q
    |||| ||||| |||||||||| || ||| ||||    ||||||||||||  | |||||||||||| || |  |||| |||| |||||| ||||| | |||    
T  17135226 gagactaatccctcgagtcttctgggactcaaatgcgcggcaaactctccctaagagttttaacgctgctgcatgcacaaggctggattcgaactaggac 17135127  T
Q  117 cttgattaagttagaagagactcgtgtcatc 147  Q
     ||||||||| |||||||||| |||||||||    
T  17135126 tttgattaagctagaagagacacgtgtcatc 17135096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 38844232 - 38844304
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgt 141  Q
    |||||||||||| ||||  ||||||||  |||||| ||||| || ||||||| ||||| ||||||||||||||    
T  38844232 agagttttaacgctgttgcatgcccaaagctggattcgaactcatgaccttggttaagctagaagagactcgt 38844304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 40294689 - 40294598
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgtgtcatccaatctaaacact 160  Q
    ||||||||||| |||||  ||  ||||| |||||| ||||| || ||||||||||||| |||| |||||||||||||||  |||||||||||    
T  40294689 agagttttaacattgttgcatatccaaggctggattcgaactcaggaccttgattaaggtagaggagactcgtgtcatctcatctaaacact 40294598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 48210982 - 48211092
Alignment:
Q  30 ctcgagtcttgtgagacccaaacaaacggcaaactctc--ttagagttttaacgttgttatatgcccaagactggatccgaaccaaga-ccttgattaag 126  Q
    ||||||| ||||| |||| ||| | ||||||| |||||  | ||||||||||||||| |  |||| |||| |||||| |||||||| | |||||||||||    
T  48210982 ctcgagtattgtgggacctaaatagacggcaagctctccataagagttttaacgttgctgcatgctcaaggctggattcgaaccaaaaaccttgattaag 48211081  T
Q  127 ttagaagagac 137  Q
    |||||||||||    
T  48211082 ttagaagagac 48211092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 48204378 - 48204447
Alignment:
Q  73 gttttaacgttgttatatgcccaagactggatccgaacc-aagaccttgattaagttagaagagactcgt 141  Q
    |||||||||||| |  ||||||||| |||||| |||||| ||||||||| ||||| ||||||||||||||    
T  48204378 gttttaacgttgctgcatgcccaaggctggattcgaacccaagaccttggttaagctagaagagactcgt 48204447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 28967291 - 28967324
Alignment:
Q  114 gaccttgattaagttagaagagactcgtgtcatc 147  Q
    ||||||| ||||||||||||||||||||||||||    
T  28967291 gaccttggttaagttagaagagactcgtgtcatc 28967324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 1386891 - 1386855
Alignment:
Q  111 caagaccttgattaagttagaagagactcgtgtcatc 147  Q
    |||||||||||||||||||||||||||  ||||||||    
T  1386891 caagaccttgattaagttagaagagacatgtgtcatc 1386855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 39142962 - 39143030
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaaccaagaccttgattaagttagaagagact 138  Q
    |||||||||||||||||  || |||||  ||| || ||||||| ||| ||||||||| |||||||||||    
T  39142962 agagttttaacgttgttgcatacccaatgctgaattcgaaccaggacattgattaaggtagaagagact 39143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 54877910 - 54877842
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagac 137  Q
    |||||||||||||||||  ||||||||| ||| || | ||| ||| |||||| ||||||||||||||||    
T  54877910 agagttttaacgttgttggatgcccaaggctgaattcaaactcaaaaccttggttaagttagaagagac 54877842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 17183767 - 17183869
Alignment:
Q  63 ctctcttagagttttaacgttgttatatgcccaagactggatccgaaccaagaccttgattaagttagaagagactcgtgtcatccaatctaaacacttt 162  Q
    |||||| |||||||||||| | ||| |||| ||||| ||||| ||| ||||||| ||| ||||  || |||||||| ||||||||  |||||| ||||||    
T  17183767 ctctctaagagttttaacgctattacatgctcaagattggattcgatccaagacattggttaaaataaaagagacttgtgtcatcttatctaagcacttt 17183866  T
Q  163 tag 165  Q
    |||    
T  17183867 tag 17183869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 17627632 - 17627558
Alignment:
Q  74 ttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgtgtcatc 147  Q
    |||||||||||||  ||||||||| |||||| ||||| || ||||||| |||| ||||||||||| |||||||||    
T  17627632 ttttaacgttgttgcatgcccaaggctggattcgaactcaggaccttggttaaattagaagagacgcgtgtcatc 17627558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 12133294 - 12133366
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaaccaa-gaccttgattaagttagaagagactcgt 141  Q
    ||||||||||||||| |  ||| ||||| |||||| |||||| | ||||||||||||| ||||||||||||||    
T  12133294 agagttttaacgttgctgcatgtccaaggctggattcgaacccatgaccttgattaagctagaagagactcgt 12133366  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 18105430 - 18105498
Alignment:
Q  74 ttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgt 141  Q
    |||||||||||||  ||||||||| |||||| |||| ||| ||||||| ||||| ||||||||||||||    
T  18105430 ttttaacgttgttgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagactcgt 18105498  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 31579295 - 31579361
Alignment:
Q  72 agttttaacgttgttatatgcccaagactggatccgaacc-aagaccttgattaagttagaagagac 137  Q
    |||||||||  ||||  ||||||||| |||||| |||||| ||||||||||||||| ||||||||||    
T  31579295 agttttaacactgttgcatgcccaaggctggattcgaacccaagaccttgattaagctagaagagac 31579361  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 33757054 - 33756976
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaaccaaga-ccttgattaagttagaagagactcgtgtcatc 147  Q
    |||||||||||| | || ||||| |||| ||| || ||||| |||| ||||||||||| |||||||||| |||||||||    
T  33757054 agagttttaacgctattgtatgctcaaggctgaattcgaactaagaaccttgattaagctagaagagacccgtgtcatc 33756976  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 7157575 - 7157503
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaaccaag-accttgattaagttagaagagactcgt 141  Q
    ||||||||||||||| |  ||||||||| || ||| |||||| || | |||| ||||||||||||||||||||    
T  7157575 agagttttaacgttgctgcatgcccaaggctagattcgaacctaggatcttggttaagttagaagagactcgt 7157503  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 13468802 - 13468895
Alignment:
Q  63 ctctcttagagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgtgtcatccaatctaa 155  Q
    |||||| |||||||||||| || || ||||||||| |||||| |||| ||| ||||||| ||||| |||||||||| |||  |||| |||||||    
T  13468802 ctctctaagagttttaacgctgctacatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctaatctaa 13468895  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 15683006 - 15682934
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgt 141  Q
    |||||||||||| || |  ||||||||| |||||| ||||| || ||||||||||||| ||||||||||||||    
T  15683006 agagttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttgattaagctagaagagactcgt 15682934  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 21910289 - 21910194
Alignment:
Q  63 ctctcttagagttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgtgtcatccaatctaaac 157  Q
    |||||| |||||||||||| ||||  ||||||||| |||||| |||| ||| || |||| ||||| ||||||||||| || |||||  ||||||||    
T  21910289 ctctctaagagttttaacgatgttgcatgcccaaggctggattcgaacccaggatcttggttaagctagaagagacttgtttcatctcatctaaac 21910194  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 29986880 - 29986794
Alignment:
Q  17 cagagattaatcactcgagtcttgtgagacccaaacaaacggcaaactctctt--agagttttaacgttgttatatgcccaagactg 101  Q
    |||||||||||| ||||||| ||||| ||| ||||  | |||||||||||| |  ||||||||||||||| | |||| |||||||||    
T  29986880 cagagattaatctctcgagttttgtgggactcaaatgagcggcaaactctcctaaagagttttaacgttgctgtatgaccaagactg 29986794  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 15614639 - 15614709
Alignment:
Q  72 agttttaacgttgttatatgcccaagactggatccgaa-ccaagaccttgattaagttagaagagactcgt 141  Q
    ||||||||||||| || ||| ||||||||| || |||| ||| ||| ||| ||||||||||||||||||||    
T  15614639 agttttaacgttgctacatgtccaagactgaattcgaacccatgacattggttaagttagaagagactcgt 15614709  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 25084111 - 25084033
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagactcgtgtcatc 147  Q
    ||||||||||| ||| |  ||| ||||||||| || ||||| |||||| ||||||||| ||||||||||| ||||||||    
T  25084111 agagttttaacattgctgcatgtccaagactgaattcgaactcaagactttgattaagctagaagagacttgtgtcatc 25084033  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 12411225 - 12411157
Alignment:
Q  70 agagttttaacgttgttatatgcccaagactggatccgaac-caagaccttgattaagttagaagagac 137  Q
    |||||||||||| || |  ||||||||| |||||| ||||| || ||||||| ||||||||||||||||    
T  12411225 agagttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttggttaagttagaagagac 12411157  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 17177186 - 17177146
Alignment:
Q  117 cttgattaagttagaagagactcgtgtcatccaatctaaac 157  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  17177186 cttgattaagttagaagagactcgtatcatcatatctaaac 17177146  T

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