View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11955_high_20 (Length: 212)
Name: NF11955_high_20
Description: NF11955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11955_high_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41775755 - 41775544
Alignment:
| Q |
1 |
gttgagtatattcaaatgagttatagaatattcatagtcttaaagttgtgaaagttttacctttagaagagtctcttctttccacatctcagttccctta |
100 |
Q |
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| T |
41775755 |
gttgagtatattcaaatgagttatagaatattcatagtcttaaagttgtgaaagttttacctttagaagagtctcttctttccacatctcagttccctta |
41775656 |
T |
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| Q |
101 |
aagaaagaccttgaagaagttcctatccaaaaagaaaagacatatattcggtcaataattcaattttgaactaatgagaagtgattgaaatgaaagcaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
41775655 |
aagaaagaccttgaagaagttcctatccaaaaagaaaagacatatattcggtcaataattcaattttgaactaataagaagtgattgaaatgaaagcaag |
41775556 |
T |
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| Q |
201 |
aaaaagtaacaa |
212 |
Q |
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|||||||||||| |
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| T |
41775555 |
aaaaagtaacaa |
41775544 |
T |
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