View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11955_low_11 (Length: 475)

Name: NF11955_low_11
Description: NF11955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11955_low_11
NF11955_low_11
[»] chr8 (4 HSPs)
chr8 (120-467)||(19970986-19971333)
chr8 (120-467)||(21021476-21021823)
chr8 (123-223)||(19970556-19970655)
chr8 (123-223)||(21022154-21022253)
[»] chr4 (8 HSPs)
chr4 (153-467)||(45110897-45111211)
chr4 (18-101)||(3091698-3091781)
chr4 (145-222)||(13387162-13387238)
chr4 (137-191)||(13371524-13371578)
chr4 (137-191)||(13381725-13381779)
chr4 (156-222)||(45111536-45111601)
chr4 (123-188)||(13372585-13372650)
chr4 (123-188)||(13382786-13382851)
[»] chr6 (4 HSPs)
chr6 (123-454)||(8615438-8615778)
chr6 (124-187)||(8616124-8616186)
chr6 (371-465)||(10922522-10922616)
chr6 (411-455)||(10922982-10923026)
[»] chr3 (3 HSPs)
chr3 (145-455)||(53395949-53396259)
chr3 (123-176)||(35835421-35835474)
chr3 (123-176)||(35892138-35892191)
[»] chr2 (5 HSPs)
chr2 (123-408)||(8143105-8143392)
chr2 (123-222)||(15554991-15555089)
chr2 (356-455)||(8149646-8149745)
chr2 (356-455)||(8154270-8154369)
chr2 (152-194)||(15554274-15554316)
[»] scaffold0538 (2 HSPs)
scaffold0538 (123-222)||(3484-3582)
scaffold0538 (120-173)||(7884-7937)
[»] chr7 (1 HSPs)
chr7 (147-203)||(43524626-43524682)


Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 120 - 467
Target Start/End: Complemental strand, 19971333 - 19970986
Alignment:
Q  120 gaaggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatca 219  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19971333 gaaggatattttgactccaagagtaactcttttgagttactctaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatca 19971234  T
Q  220 tcttcatgatcacgcactattatcctctacatcacttccttgttgctgagtcactaagaaaaatgaataagttgtttgggtcttttttctcgatccttgc 319  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19971233 tcttcatgatcacgcactattatcctctacatcgcttccttgttgctgcgtcactaagaaaaatgaatacgttgtttgggtcttttttctcgatccttgc 19971134  T
Q  320 acatatgttctcaaagattaacaatagtcatgaacaaaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccac 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  19971133 acatatgttctcaaagattaacaatagtcatgaacaaaattggctttggatttcaattttatgtctacaagatctctattttatgccctttgattcccac 19971034  T
Q  420 aaagaatttggactccataaaaatctagcgactttcgacattattttt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19971033 aaagaatttggactccataaaaatctagcgactttcgacattattttt 19970986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 120 - 467
Target Start/End: Original strand, 21021476 - 21021823
Alignment:
Q  120 gaaggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatca 219  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21021476 gaaggatattttgactccaagagtaactcttttgagttactctaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatca 21021575  T
Q  220 tcttcatgatcacgcactattatcctctacatcacttccttgttgctgagtcactaagaaaaatgaataagttgtttgggtcttttttctcgatccttgc 319  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21021576 tcttcatgatcacgcactattatcctctacatcgcttccttgttgctgcgtcactaagaaaaatgaatacgttgtttgggtcttttttctcgatccttgc 21021675  T
Q  320 acatatgttctcaaagattaacaatagtcatgaacaaaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccac 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  21021676 acatatgttctcaaagattaacaatagtcatgaacaaaattggctttggatttcaattttatgtctacaagatctctattttatgccctttgattcccac 21021775  T
Q  420 aaagaatttggactccataaaaatctagcgactttcgacattattttt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21021776 aaagaatttggactccataaaaatctagcgactttcgacattattttt 21021823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 19970556 - 19970655
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||  |||| ||||| |||||||||||||||    
T  19970556 ggatattttgactccaagagtaactcttttgagttactccaaatcacatccctccatttagttttaatctaaccatcc-taattgattattaaatcatct 19970654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 21022253 - 21022154
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||  |||| ||||| |||||||||||||||    
T  21022253 ggatattttgactccaagagtaactcttttgagttactccaaatcacatccctccatttagttttaatctaaccatcc-taattgattattaaatcatct 21022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 153 - 467
Target Start/End: Original strand, 45110897 - 45111211
Alignment:
Q  153 gagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatcttcatgatcacgcactattatcctctacatc 252  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45110897 gagttactccaaatcacatccctctattttgttttaatccaacgattcttaattaattattaaatcatcttcatgatcacgcactattatcctctacatc 45110996  T
Q  253 acttccttgttgctgagtcactaagaaaaatgaataagttgtttgggtcttttttctcgatccttgcacatatgttctcaaagattaacaatagtcatga 352  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45110997 acttccttgttgccgcgtcactaagaaaaatgaatacgttgtttgggtcttttttctcgatccttgcacatatgttctcaaagattaacaatagtcatga 45111096  T
Q  353 acaaaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccacaaagaatttggactccataaaaatctagcgact 452  Q
    ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45111097 acaaaattggctttggatttcaattatatgtatacaagatctctattttatgccctttgattcccacaaagaatttgaactccataaaaatctagcgact 45111196  T
Q  453 ttcgacattattttt 467  Q
    |||||||||||||||    
T  45111197 ttcgacattattttt 45111211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 3091781 - 3091698
Alignment:
Q  18 aataaagtagaattcttatagttaaattagtttaagatataattggaagtaaaaaagtcaaccaaaactcatgcattctctctc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3091781 aataaagtagaattcttatagttaaattagtttaagatataattggaagtaaaaaagtcaaccaaaactcatgcattctctctc 3091698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 13387162 - 13387238
Alignment:
Q  145 actcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||||||||||||||||||||||| || |||||||||||||| || |||  ||||||||||||| ||| ||||    
T  13387162 actcttttgagttactccaaatcacatccgtccattttgttttaatcaaacgat-gttaattaattatttaattatct 13387238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 13371524 - 13371578
Alignment:
Q  137 caagagtgactcttttgagttactccaaatcacatccctctattttgttttaatc 191  Q
    ||||||| ||||||||||||||||||||||||||||| || || || ||||||||    
T  13371524 caagagtaactcttttgagttactccaaatcacatccgtccatattcttttaatc 13371578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 13381725 - 13381779
Alignment:
Q  137 caagagtgactcttttgagttactccaaatcacatccctctattttgttttaatc 191  Q
    ||||||| ||||||||||||||||||||||||||||| || || || ||||||||    
T  13381725 caagagtaactcttttgagttactccaaatcacatccgtccatattcttttaatc 13381779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 45111601 - 45111536
Alignment:
Q  156 ttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||||||||||||||| |||| ||||||||| ||  |||| ||||| |||||||||||||||    
T  45111601 ttactccaaatcacatccctccatttagttttaatctaaccatcc-taattgattattaaatcatct 45111536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 13372585 - 13372650
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgtttta 188  Q
    |||||| || ||| ||||||| |||||||||||||||| |||||||||| | || |||||| ||||    
T  13372585 ggatatattgacttcaagagtaactcttttgagttactgcaaatcacatacgtcgattttgcttta 13372650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 13382786 - 13382851
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgtttta 188  Q
    |||||| || ||| ||||||| |||||||||||||||| |||||||||| | || |||||| ||||    
T  13382786 ggatatattgacttcaagagtaactcttttgagttactgcaaatcacatacgtcgattttgcttta 13382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 123 - 454
Target Start/End: Original strand, 8615438 - 8615778
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||  || |||||||||||||||||||||||||||    
T  8615438 ggatattttgactccaatagtaactcttttgagttactccaaatcacatccctccattgtgttttaatttaacgatccttaattaattattaaatcatct 8615537  T
Q  223 tcatgatcacgcactattatcctctacatcacttccttgttgctgagtcactaagaaaaatgaataagttgtttgggtcttttttctcgatccttgcaca 322  Q
    ||||||||| ||||||||||| |||||||  || |||| |||| | |||||||||||||||||||| | ||||  | ||||||| ||| |||| | ||      
T  8615538 tcatgatcaagcactattatcttctacattgctcccttattgcggtgtcactaagaaaaatgaatacgctgttaagatctttttcctcaatccatccatg 8615637  T
Q  323 tatgttctcaaagattaac-aatagtcatgaacaaaattggctttgga--------tttcaattctatgtctacaggatctctattttatgccctttgat 413  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||| |        ||||||||||||| ||||||| ||| |||||||||||||| |||    
T  8615638 tatgttctcaaagattatcaaatagtcatgaacaaaattgcctttgaatttcaaattttcaattctatggctacagggtctttattttatgcccttggat 8615737  T
Q  414 tcccacaaagaatttggactccataaaaatctagcgacttt 454  Q
    | ||||||| |||||||||||| |||||||||||| |||||    
T  8615738 ttccacaaacaatttggactccgtaaaaatctagcaacttt 8615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 8616186 - 8616124
Alignment:
Q  124 gatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgtttt 187  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  8616186 gatattttgactccaagagtaactcttttgagttactccaaatcacat-cctccattttgtttt 8616124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 465
Target Start/End: Complemental strand, 10922616 - 10922522
Alignment:
Q  371 ttcaattctatgtctacaggatctctattttatgccctttgattcccacaaagaatttggactccataaaaatctagcgactttcgacattattt 465  Q
    |||||||||||||||| | | ||||||||||||| ||||  ||| ||||||| |||||||| ||||||||||||||  ||||||| | |||||||    
T  10922616 ttcaattctatgtctatatggtctctattttatgtccttgaatttccacaaataatttggattccataaaaatctaatgactttcaatattattt 10922522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 455
Target Start/End: Complemental strand, 10923026 - 10922982
Alignment:
Q  411 gattcccacaaagaatttggactccataaaaatctagcgactttc 455  Q
    |||| |||||||||||||||| ||||||||||||||  |||||||    
T  10923026 gatttccacaaagaatttggattccataaaaatctaatgactttc 10922982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 145 - 455
Target Start/End: Original strand, 53395949 - 53396259
Alignment:
Q  145 actcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatcttcatgatcacgcactattatcc 244  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53395949 actcttttgagttactccaaatcacatccctccattatattttaatctaccgatccttaattaattattaaatcatcttcatgatcaagcactattatcc 53396048  T
Q  245 tctacatcacttccttgttgctgagtcactaagaaaaatg-aataagttgtttgggtcttttttctcgatccttgcacatatgttctcaaagattaacaa 343  Q
    |||||||| || |||| |||| | |||||||||||||||| ||||  |||||   ||| |||| ||| |||||| ||  ||||||||||||||||| |||    
T  53396049 tctacatcgctcccttattgcagcgtcactaagaaaaatgaaatacattgttaaagtc-ttttcctcaatccttccatgtatgttctcaaagattatcaa 53396147  T
Q  344 tagtcatgaacaaaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccacaaagaatttggactccataaaaat 443  Q
    ||||||||||  |||||| || ||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||| |||||   |||||||    
T  53396148 tagtcatgaatgaaattgcctatggatttcaattcaatgtctacaggttctctattttaagcccttggatttccacaaagaattcggacttggtaaaaat 53396247  T
Q  444 ctagcgactttc 455  Q
    ||||||||||||    
T  53396248 ctagcgactttc 53396259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 35835421 - 35835474
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctc 176  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  35835421 ggatattttgactccaagagtaactcttttgagttactccaaatcacatccctc 35835474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 35892138 - 35892191
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctc 176  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  35892138 ggatattttgactccaagagtaactcttttgagttactccaaatcacatccctc 35892191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 408
Target Start/End: Complemental strand, 8143392 - 8143105
Alignment:
Q  123 ggatattttaactccaag-agtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattatt-aaatcat 220  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||  ||| |||||||||| |  |||||||||||||| ||| |||||||    
T  8143392 ggatattttgactccaaggagtaactcttttgagttactccaaatcacatcccttcattatgttttaatctaccgatccttaattaatcatttaaatcat 8143293  T
Q  221 cttcatgatcacgcactattatcctctacatcacttccttgttgctgagtcactaagaaaaatg-aataagttgtttgggtcttttttctcgatccttgc 319  Q
    ||||||||||| |||||||||||||||||||| || |||| |||| | |||||||||||||||| ||||  |||||   ||| |||| |||||||||| |    
T  8143292 cttcatgatcaagcactattatcctctacatcgctcccttattgcagcgtcactaagaaaaatgaaatacattgttaaagtc-ttttcctcgatccttcc 8143194  T
Q  320 acatatgttctcaaagattaacaatagtcatgaacaaaattggctttggatttcaattctatgtctacaggatctctattttatgccct 408  Q
    |  ||||||||||||||||| |||||||||||||| |||||| || ||||||||||||| ||||||||||| |||||||||||||||||    
T  8143193 atgtatgttctcaaagattatcaatagtcatgaacgaaattgcctatggatttcaattcaatgtctacaggttctctattttatgccct 8143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 15555089 - 15554991
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||||||||||    
T  15555089 ggatattttaactccaagagtaactcttttaagttactccaaatcacatccctccattttattttaatccaacgatgc-taattaattattaaatcatct 15554991  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 8149745 - 8149646
Alignment:
Q  356 aaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccacaaagaatttggactccataaaaatctagcgactttc 455  Q
    |||||| || ||||||||||||| |||||||| || |||||||||||||||||| |||| |||||| |||||||||||   |||||||||||||||||||    
T  8149745 aaattgcctatggatttcaattcaatgtctactggttctctattttatgcccttggatttccacaaggaatttggacttagtaaaaatctagcgactttc 8149646  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 8154369 - 8154270
Alignment:
Q  356 aaattggctttggatttcaattctatgtctacaggatctctattttatgccctttgattcccacaaagaatttggactccataaaaatctagcgactttc 455  Q
    |||||| || ||||||||||||| |||||||| || |||||||||||||||||| |||| |||||| |||||||||||   |||||||||||||||||||    
T  8154369 aaattgcctatggatttcaattcaatgtctactggttctctattttatgcccttggatttccacaaggaatttggacttagtaaaaatctagcgactttc 8154270  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 15554274 - 15554316
Alignment:
Q  152 tgagttactccaaatcacatccctctattttgttttaatccaa 194  Q
    |||| ||||||||||||||||| || |||||||||||||||||    
T  15554274 tgagctactccaaatcacatccttccattttgttttaatccaa 15554316  T

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Target: scaffold0538 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0538
Description:

Target: scaffold0538; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 3582 - 3484
Alignment:
Q  123 ggatattttaactccaagagtgactcttttgagttactccaaatcacatccctctattttgttttaatccaatgatccttaattaattattaaatcatct 222  Q
    |||||| || ||| ||||||| ||||||||||||||||||||||||||||| || || || |||||||| ||  ||  |||||||||||| |||||||||    
T  3582 ggatatattgacttcaagagtaactcttttgagttactccaaatcacatccgtccatattcttttaatcaaacaat-gttaattaattatcaaatcatct 3484  T

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Target: scaffold0538; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 7937 - 7884
Alignment:
Q  120 gaaggatattttaactccaagagtgactcttttgagttactccaaatcacatcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||| ||||||||||||    
T  7937 gaaggatatattgacttcaagagtaactcttttgagttacttcaaatcacatcc 7884  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 43524682 - 43524626
Alignment:
Q  147 tcttttgagttactccaaatcacatccctctattttgttttaatccaatgatcctta 203  Q
    |||||||||| ||||||||||||  ||||| ||||| |||||||| |||| ||||||    
T  43524682 tcttttgagtcactccaaatcactaccctccattttattttaatctaatggtcctta 43524626  T

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