View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11955_low_17 (Length: 252)
Name: NF11955_low_17
Description: NF11955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11955_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 95 - 245
Target Start/End: Original strand, 35383068 - 35383226
Alignment:
| Q |
95 |
gattaatgtgcttgaaaaggtttccgcatccacatcctccttgtacattttgggtccattagctatcaagtttataatgaaca-tttcttagtgg----- |
188 |
Q |
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| T |
35383068 |
gattaatgtgcttgaaaaggtttccgcatccacatcctccttgtacattttgggtccattagctatcaagtttataatgaatattttcttagtggaaaat |
35383167 |
T |
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| Q |
189 |
--aaggttttcaaaagcttatgaaaaataaaatctttgcaaagaggtcctatcttattg |
245 |
Q |
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| T |
35383168 |
aaaatctttgcaaaagcttatgaaaaataaaatctttgcaaagaggtcctatcttattg |
35383226 |
T |
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