View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11956_high_16 (Length: 247)
Name: NF11956_high_16
Description: NF11956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11956_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37982459 - 37982237
Alignment:
| Q |
1 |
tatataataatctcatgtttgtatgataaagtactatgattgagttatttgaatttatgatatttgttttaattgatcctcaacacgctggatatgcgct |
100 |
Q |
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| T |
37982459 |
tatatattaatctcatgtttgtatgataaagtactatgattgagttatttgaatttatgatatttgttttaatttatcctcaacacgctgaatatgcgct |
37982360 |
T |
|
| Q |
101 |
tagtaatatcaaatttacgcagttactaattgagcatataataatgcattaaccatgtcataaaacatactatcaaattaccaagcagcggatgcgttgt |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37982359 |
tagtaatatcaaatttacgtagttactaattgagcatataataatgcattaaccatgtcataaaacatactatcaaattaccaagcggcggatgcgttgt |
37982260 |
T |
|
| Q |
201 |
gaaacgattgaaaatgtgcttag |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
37982259 |
gaaacgattgaaaatgtgcttag |
37982237 |
T |
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