View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11956_low_19 (Length: 237)
Name: NF11956_low_19
Description: NF11956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11956_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 46470977 - 46471195
Alignment:
| Q |
1 |
aggaggttcctccgaggtagataggtatagtttggcttaagaatggcatggtctctgaaaataactctaggcatggaagccattgattattagacgagaa |
100 |
Q |
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| T |
46470977 |
aggaggttcctccgaggtagataggtatagtttggcttaagaatggcatggtctctgaaaataactctaggcatggaagccattgattattagacgagaa |
46471076 |
T |
|
| Q |
101 |
aaggggtttgagtttgaaaagggtttatgaatattcaagaatgagtgagtagggaaattagagtgtgggaatctgaaattgaaaatgagagtgacaagtt |
200 |
Q |
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| T |
46471077 |
aaggggtttgagtttgaaaagggtttatgaatattcaagaatgagtgagtagggaaattagagtgtgggaatctgaaattgaaaatgagagtgacaa--- |
46471173 |
T |
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| Q |
201 |
tgtttgggtgttagtgaagaatt |
223 |
Q |
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|||||||||||||||||||||| |
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| T |
46471174 |
-gtttgggtgttagtgaagaatt |
46471195 |
T |
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