View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11957_low_19 (Length: 230)
Name: NF11957_low_19
Description: NF11957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11957_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 24598483 - 24598695
Alignment:
| Q |
1 |
catccagcacaacatcctcatctccgcaaaatatatcaacatttaaagactaagtcaaatcctaacaaccagttagtgtacactactaatatttgaaacc |
100 |
Q |
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|||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
24598483 |
catccaacacaacatcctcgtctctgcaaaatatatcaacatttaaagactaagtcaaatcctaacaaccagttagtgtgtactactaatatttgaaacg |
24598582 |
T |
|
| Q |
101 |
agaagactatttgaacggtgagtggtcacgttccacacaagaaaaatatgcatgactttatcatctatgacatcaagataaagaaaaaacacatttagtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24598583 |
agaagactatttgaacggtgagtggtcacgttccacacaagaaaaatatgcgtgactttatcatctatgacatcaagataaagaaaaaacacatttagtt |
24598682 |
T |
|
| Q |
201 |
tcattagcattag |
213 |
Q |
| |
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||||||||||||| |
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| T |
24598683 |
tcattagcattag |
24598695 |
T |
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