View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11959_high_53 (Length: 254)
Name: NF11959_high_53
Description: NF11959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11959_high_53 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 29018818 - 29019058
Alignment:
| Q |
1 |
tatgcatgcgccttgtttttgtttcttataagcagagatatgtaattgacccatcgtgcgtggaatggaacaattcaatgtgttattattggtagcaaag |
100 |
Q |
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| T |
29018818 |
tatgcatgcgccttgtttttgtttcttataagcagagatatgtaattgacccatcgtgcgtggaatggaacaattcaatgtgttattattggtagcaaaa |
29018917 |
T |
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| Q |
101 |
ttatgtgcattacaatttacaaacccgaccaaaaagtagaacatgtaaacaaggaagaataagatctatcgttggtaagatatgttttgcttctaagtgt |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29018918 |
ttatgtgcattacaatttacaaacccgacaaaaaagtagaacatgtaaacaaggaagaataagatctatcgttggtaagatatgttttgcttctaagtgt |
29019017 |
T |
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| Q |
201 |
tattttattgaaataatgatagataagcacttggtgtgtct |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
29019018 |
tattttattgaaataatgatagataagcacttggtgtgtct |
29019058 |
T |
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