View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11959_high_62 (Length: 239)

Name: NF11959_high_62
Description: NF11959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11959_high_62
NF11959_high_62
[»] chr8 (27 HSPs)
chr8 (7-223)||(12469549-12469774)
chr8 (1-69)||(8784922-8784989)
chr8 (7-69)||(37967886-37967947)
chr8 (1-69)||(44265792-44265859)
chr8 (7-69)||(30658331-30658392)
chr8 (1-69)||(6590610-6590677)
chr8 (1-69)||(21159728-21159795)
chr8 (1-68)||(41590221-41590287)
chr8 (7-69)||(6590153-6590214)
chr8 (7-69)||(30133872-30133933)
chr8 (1-69)||(33322877-33322944)
chr8 (1-69)||(36126602-36126669)
chr8 (1-69)||(43988491-43988558)
chr8 (7-69)||(2827160-2827221)
chr8 (7-69)||(3866737-3866798)
chr8 (7-69)||(10409485-10409546)
chr8 (7-69)||(17842815-17842876)
chr8 (7-69)||(28755054-28755115)
chr8 (7-69)||(30806220-30806281)
chr8 (7-69)||(36018465-36018526)
chr8 (7-69)||(37967422-37967483)
chr8 (7-69)||(42950227-42950288)
chr8 (7-69)||(44893744-44893805)
chr8 (7-69)||(44894755-44894816)
chr8 (1-69)||(38706323-38706390)
chr8 (6-69)||(39336880-39336942)
chr8 (1-69)||(40304874-40304941)
[»] chr1 (21 HSPs)
chr1 (1-69)||(35531133-35531200)
chr1 (1-69)||(26805373-26805440)
chr1 (1-69)||(21794679-21794746)
chr1 (7-69)||(27550683-27550744)
chr1 (1-69)||(47008558-47008625)
chr1 (7-69)||(46517053-46517114)
chr1 (7-69)||(48410496-48410557)
chr1 (7-68)||(42972316-42972376)
chr1 (1-69)||(1296814-1296881)
chr1 (1-69)||(10041123-10041190)
chr1 (7-70)||(51338350-51338412)
chr1 (7-67)||(52881487-52881546)
chr1 (7-69)||(21090942-21091003)
chr1 (7-69)||(25352791-25352852)
chr1 (7-69)||(30742674-30742735)
chr1 (7-69)||(46517419-46517480)
chr1 (7-69)||(47008975-47009036)
chr1 (7-69)||(48218195-48218256)
chr1 (7-69)||(49767575-49767636)
chr1 (8-69)||(48410010-48410070)
chr1 (25-69)||(49768766-49768810)
[»] chr7 (23 HSPs)
chr7 (1-69)||(47792192-47792259)
chr7 (7-69)||(38595339-38595400)
chr7 (1-69)||(27727107-27727174)
chr7 (7-69)||(12932902-12932963)
chr7 (7-69)||(35482401-35482462)
chr7 (7-72)||(35481970-35482034)
chr7 (1-68)||(6589295-6589361)
chr7 (7-69)||(8832597-8832658)
chr7 (7-69)||(12908569-12908630)
chr7 (7-69)||(40304536-40304597)
chr7 (7-63)||(1544364-1544419)
chr7 (1-69)||(7238458-7238525)
chr7 (1-69)||(10620402-10620469)
chr7 (7-69)||(8081698-8081759)
chr7 (7-69)||(14990891-14990952)
chr7 (7-69)||(15420502-15420563)
chr7 (7-69)||(28924845-28924906)
chr7 (7-69)||(37107568-37107629)
chr7 (7-69)||(38593164-38593224)
chr7 (7-69)||(38599322-38599383)
chr7 (1-63)||(43574584-43574645)
chr7 (7-69)||(44081299-44081360)
chr7 (9-69)||(8833551-8833609)
[»] chr5 (31 HSPs)
chr5 (1-69)||(17742673-17742740)
chr5 (1-68)||(9924579-9924645)
chr5 (1-69)||(4463105-4463172)
chr5 (1-69)||(8404276-8404343)
chr5 (1-69)||(40158610-40158677)
chr5 (6-69)||(30698563-30698625)
chr5 (6-69)||(30733838-30733900)
chr5 (7-73)||(2005377-2005442)
chr5 (7-69)||(10674531-10674592)
chr5 (7-69)||(28456476-28456537)
chr5 (7-69)||(34010274-34010335)
chr5 (1-69)||(9687413-9687480)
chr5 (6-69)||(19332351-19332413)
chr5 (7-69)||(2263136-2263197)
chr5 (7-69)||(3407234-3407295)
chr5 (7-69)||(4461845-4461906)
chr5 (7-69)||(22023412-22023473)
chr5 (7-69)||(32510501-32510562)
chr5 (7-69)||(36876205-36876266)
chr5 (9-69)||(4462463-4462522)
chr5 (1-69)||(34785132-34785199)
chr5 (7-69)||(28615911-28615971)
chr5 (10-69)||(37812172-37812230)
chr5 (7-69)||(17742223-17742284)
chr5 (7-69)||(30394434-30394495)
chr5 (7-69)||(40158154-40158215)
chr5 (7-69)||(42877954-42878015)
chr5 (7-69)||(43210973-43211034)
chr5 (1-50)||(314760-314808)
chr5 (1-69)||(621509-621576)
chr5 (1-69)||(37103377-37103444)
[»] chr2 (27 HSPs)
chr2 (1-69)||(33031361-33031428)
chr2 (12-69)||(42274181-42274237)
chr2 (1-69)||(41121085-41121152)
chr2 (1-68)||(33832007-33832073)
chr2 (1-69)||(29809136-29809203)
chr2 (1-72)||(13371874-13371944)
chr2 (8-69)||(8392673-8392733)
chr2 (1-69)||(14201306-14201373)
chr2 (1-69)||(19176651-19176718)
chr2 (1-68)||(35498897-35498963)
chr2 (7-69)||(3117864-3117925)
chr2 (7-69)||(10357668-10357729)
chr2 (7-69)||(30982736-30982796)
chr2 (7-69)||(31435927-31435988)
chr2 (7-69)||(32318105-32318166)
chr2 (7-69)||(35498459-35498520)
chr2 (7-69)||(41120631-41120692)
chr2 (7-69)||(44287027-44287088)
chr2 (8-69)||(13027791-13027851)
chr2 (7-67)||(13372266-13372324)
chr2 (6-70)||(7655057-7655119)
chr2 (1-65)||(8737714-8737776)
chr2 (1-69)||(30784520-30784586)
chr2 (25-69)||(31771686-31771730)
chr2 (9-69)||(36512322-36512380)
chr2 (1-69)||(40364768-40364835)
chr2 (1-69)||(44286568-44286635)
[»] chr3 (26 HSPs)
chr3 (7-69)||(53377618-53377679)
chr3 (1-69)||(14525134-14525201)
chr3 (1-69)||(23917665-23917732)
chr3 (1-69)||(45419667-45419734)
chr3 (7-69)||(34995882-34995943)
chr3 (1-69)||(29348618-29348685)
chr3 (1-69)||(44808721-44808788)
chr3 (6-69)||(29348165-29348227)
chr3 (7-69)||(33225677-33225738)
chr3 (7-69)||(52701050-52701111)
chr3 (7-69)||(52702005-52702066)
chr3 (7-69)||(54268736-54268797)
chr3 (1-66)||(11294138-11294202)
chr3 (1-69)||(11045750-11045816)
chr3 (1-69)||(40762483-40762550)
chr3 (7-69)||(32146891-32146952)
chr3 (7-69)||(19601903-19601964)
chr3 (7-69)||(31990956-31991017)
chr3 (7-69)||(33226764-33226825)
chr3 (7-69)||(41928183-41928244)
chr3 (7-69)||(44809182-44809243)
chr3 (7-69)||(53518129-53518190)
chr3 (12-69)||(23883683-23883739)
chr3 (25-69)||(27492683-27492727)
chr3 (1-69)||(34995428-34995495)
chr3 (25-69)||(44556964-44557008)
[»] chr6 (22 HSPs)
chr6 (1-69)||(8710185-8710252)
chr6 (1-69)||(30493055-30493122)
chr6 (7-69)||(30492611-30492672)
chr6 (8-69)||(3914766-3914826)
chr6 (1-69)||(1821323-1821390)
chr6 (1-69)||(5087074-5087141)
chr6 (1-69)||(5974190-5974257)
chr6 (1-69)||(10915652-10915719)
chr6 (1-69)||(28476101-28476168)
chr6 (7-69)||(3913148-3913209)
chr6 (1-69)||(17697271-17697338)
chr6 (7-69)||(844460-844523)
chr6 (6-69)||(30660668-30660730)
chr6 (7-69)||(939188-939249)
chr6 (7-69)||(5086766-5086827)
chr6 (7-69)||(18804133-18804194)
chr6 (7-69)||(33518702-33518763)
chr6 (7-69)||(33744543-33744604)
chr6 (1-69)||(2937325-2937391)
chr6 (1-69)||(20510812-20510879)
chr6 (1-69)||(29691794-29691861)
chr6 (25-69)||(30394776-30394820)
[»] chr4 (23 HSPs)
chr4 (1-69)||(7491037-7491104)
chr4 (1-69)||(28448272-28448339)
chr4 (1-69)||(51395495-51395562)
chr4 (6-69)||(55283459-55283521)
chr4 (1-69)||(7499088-7499155)
chr4 (7-69)||(13508756-13508817)
chr4 (7-69)||(22068450-22068511)
chr4 (7-69)||(38499640-38499701)
chr4 (7-69)||(47379060-47379121)
chr4 (7-69)||(52947644-52947705)
chr4 (7-72)||(4850447-4850511)
chr4 (8-69)||(43938286-43938346)
chr4 (1-69)||(47463710-47463777)
chr4 (1-69)||(52948100-52948167)
chr4 (7-69)||(14579074-14579135)
chr4 (7-69)||(28164068-28164128)
chr4 (7-69)||(31470851-31470912)
chr4 (7-69)||(48738397-48738458)
chr4 (8-69)||(38114558-38114618)
chr4 (28-69)||(45558011-45558052)
chr4 (7-68)||(48082797-48082857)
chr4 (1-69)||(3872927-3872994)
chr4 (1-69)||(23473363-23473430)
[»] scaffold0036 (1 HSPs)
scaffold0036 (7-69)||(17259-17320)
[»] scaffold0809 (1 HSPs)
scaffold0809 (10-69)||(639-697)
[»] scaffold1191 (1 HSPs)
scaffold1191 (7-68)||(1019-1079)
[»] scaffold0514 (2 HSPs)
scaffold0514 (1-58)||(6074-6130)
scaffold0514 (7-69)||(6520-6581)
[»] scaffold1190 (1 HSPs)
scaffold1190 (1-69)||(84-151)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-68)||(32846-32912)
[»] scaffold1160 (1 HSPs)
scaffold1160 (7-69)||(1539-1600)
[»] scaffold0707 (1 HSPs)
scaffold0707 (7-69)||(7246-7307)
[»] scaffold0640 (1 HSPs)
scaffold0640 (7-69)||(3773-3834)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-69)||(238240-238301)
[»] scaffold0562 (1 HSPs)
scaffold0562 (1-69)||(3746-3813)
[»] scaffold0245 (1 HSPs)
scaffold0245 (1-69)||(24725-24791)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 12469549 - 12469774
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat---------atattttattgaatggattctaaaaaat 97  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  12469549 tattaaaattaagtaaaagactaaacttagaagttcctaattttatagggaccaaaaacatatttaatctatatattttattgaatggattctaaaaaat 12469648  T
Q  98 ctaccatctgcgtctgtctctcgttattagacaaattctaccacggtgtcactctcttctccttcccgctcgttgttgctgccatctttcttcctcgcat 197  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12469649 ctaccatctgtgtctatctctcgttattagacaaattctaccacggtgtcactctcttctccttcccgctcgttgttgctgccatctttcttcctcgcat 12469748  T
Q  198 attattgaagaggcgaaagtgaaggg 223  Q
    ||||||||||||||||||||||||||    
T  12469749 attattgaagaggcgaaagtgaaggg 12469774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8784922 - 8784989
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  8784922 aaaacctattaaaattaagtaag-gactaaacttagaaattcctaattttagagggaccaaaaacatat 8784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 37967886 - 37967947
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  37967886 tattaaaattaagtaag-gactaaacttagaagttcctaattttatagggaccaaaaacatat 37967947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44265792 - 44265859
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||||||||| |||||||||||||| || | ||||||||| |||| ||||||||||    
T  44265792 aaaacttattaaaattaagtaaa-gactaaacttagaagtttccaattttataaggacaaaaaacatat 44265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 30658392 - 30658331
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| |||  |||||||||||||||||||||||||    
T  30658392 tattaaaattaagtaag-gactaaacttagaagttcacaattttatagggaccaaaaacatat 30658331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6590610 - 6590677
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||||| ||||| ||||    
T  6590610 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggacaaaaaatatat 6590677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21159795 - 21159728
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||  |||||||||||||||||||| ||||    
T  21159795 aaaacctattaaaattaagtaag-gactaaacttagaagttctcaattttatagggaccaaaaatatat 21159728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41590287 - 41590221
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||| ||||||||||||||||  ||||||||||| || |||  ||||||||||||||||||||||||    
T  41590287 aaaacctattaaaattaagtaag-gactaaacttaaaagttctcaattttatagggaccaaaaacata 41590221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 6590214 - 6590153
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  6590214 tattaaaattaagtaag-gactaaacttaaaagatcccaattttatagggaccaaaaacatat 6590153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 30133872 - 30133933
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||| ||  |||||||||||||||||||||||||    
T  30133872 tattaaaattaagtaag-gactaaacttaaaaaatctcaattttatagggaccaaaaacatat 30133933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33322877 - 33322944
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||| |||  |||||||||||||| || | |||||||||| ||||||||||||||    
T  33322877 aaaacctattaaaattaaataag-gactaaacttagaagtttccaattttatagagaccaaaaacatat 33322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36126602 - 36126669
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||| || |||  |||||||||||||||||| ||||||    
T  36126602 aaaacctattaaaattaagtaag-gactaaacttaaaagttctcaattttatagggaccaaacacatat 36126669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43988491 - 43988558
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||||||   |  |||||||||||||||||||||||||    
T  43988491 aaaacctattaaaattaagtaag-gactaaacttagaagacctcaattttatagggaccaaaaacatat 43988558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 2827160 - 2827221
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  | | |||||||||||||||||||||||||    
T  2827160 tattaaaattaagtaag-gactaaacttaaaagcttcaaattttatagggaccaaaaacatat 2827221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 3866737 - 3866798
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||| ||||||| ||  |||||||||||||||||||||||||||||    
T  3866737 tattataattaagtaag-gacaaaacttaaaagatcctaattttatagggaccaaaaacatat 3866798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 10409546 - 10409485
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| ||||||| |||||||||||||||||    
T  10409546 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttacagggaccaaaaacatat 10409485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 17842815 - 17842876
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| || ||   |||||||||||||||||||||||||    
T  17842815 tattaaaattaagtaag-gactaaacttaaaagttttcaattttatagggaccaaaaacatat 17842876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 28755115 - 28755054
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||| ||| ||||||||||||||  ||  |||||||||||||||||||| ||||    
T  28755115 tattaaaattaagcaaa-gactaaacttagaagatcgcaattttatagggaccaaaaatatat 28755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 30806281 - 30806220
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||| |||||||||| || || | ||||||||||| |||||||| ||||    
T  30806281 tattaaaattaagtaaat-actaaacttaaaagtttccaattttataggaaccaaaaatatat 30806220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 36018465 - 36018526
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||| |||  || |||||||| ||||||| |||||||||||||||||||| ||||    
T  36018465 tattaaaattaattaag-gattaaacttaaaaattccaaattttatagggaccaaaaaaatat 36018526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 37967483 - 37967422
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| ||||||||||| ||  ||  |||||||||||||| ||||||||||    
T  37967483 tattaaaattaagtaaa-gactaaacttaaaagatctcaattttatagggacgaaaaacatat 37967422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 42950227 - 42950288
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||| |   |||||||||||||||||||||||||    
T  42950227 tattaaaattaagtaag-gactaaacttaaaaagtaacaattttatagggaccaaaaacatat 42950288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 44893805 - 44893744
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||| ||| ||  ||| |||||||||||||||||||||||||    
T  44893805 tattaaaattaagtaag-gactaaatttaaaaggtcccaattttatagggaccaaaaacatat 44893744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 44894755 - 44894816
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  | ||||||||| ||  ||| |||||||||||||||||||||||||    
T  44894755 tattaaaattaagtaaggg-ctaaacttaaaagatcccaattttatagggaccaaaaacatat 44894816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38706390 - 38706323
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||| ||||||| ||| |||||||| ||  |||  ||||||||||||||||||||||||    
T  38706390 aaaacctattaaaaataagtaa-tgattaaacttaaaagatccctattttatagggaccaaaaacatat 38706323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 39336942 - 39336880
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcct-aattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  ||||||||||| |||| ||| |||||||||||||| ||||||||||    
T  39336942 ttattaaaattaagtaag-gactaaactta-aaatgcctcaattttatagggactaaaaacatat 39336880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40304941 - 40304874
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||| |||||||||||||||||  ||||||||||||||  ||  || |||||| |||||||||||||||    
T  40304941 aaaaattattaaaattaagtaag-gactaaacttagaaggtctcaagtttataaggaccaaaaacatat 40304874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35531133 - 35531200
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  35531133 aaaacttattaaaattaagtaag-gactaaacttagaagttcccaattttatagggaccaaaaacatat 35531200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26805440 - 26805373
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  26805440 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggaccaaaaacatat 26805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21794679 - 21794746
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||| || |||| |||||||||||||||||||||||||    
T  21794679 aaaacctattaaaattaagtaag-gactaaacttataagttcccaattttatagggaccaaaaacatat 21794746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 27550744 - 27550683
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||    
T  27550744 tattataattaagtaag-gactaaacttaaaaaatcctaattttatagggaccaaaaacatat 27550683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47008625 - 47008558
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || | ||||||||| |||| |||||||||||||||||||||||||    
T  47008625 aaaacctattaaaattaagtaag-gattgaacttagaagttcccaattttatagggaccaaaaacatat 47008558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 46517114 - 46517053
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  || ||||||||||| || ||||| |||||||||||||||||||||    
T  46517114 tattaaaattaagtaag-gattaaacttagaagttgctaatcttatagggaccaaaaacatat 46517053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 48410496 - 48410557
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| || || | |||||||||||||||||||||||||    
T  48410496 tattaaaattaagtaag-gactaaacttaaaagtttcaaattttatagggaccaaaaacatat 48410557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 42972316 - 42972376
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||||||||||||||  ||||||||||| || |||  ||||||||||||||||||||||||    
T  42972316 tattaaaattaagtaag-gactaaacttaaaagttctcaattttatagggaccaaaaacata 42972376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1296881 - 1296814
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||| ||||| ||||||| ||||| ||||||||||||| |||| ||||||||| |||| ||||||||||    
T  1296881 aaaaattattcaaattaattaaat-actaaacttagaagttccaaattttataaggacaaaaaacatat 1296814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10041190 - 10041123
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||  || |||||| |||||||||||||||    
T  10041190 aaaacatattaaaattaagtaag-gactaaacttagaagttctcaactttataaggaccaaaaacatat 10041123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 51338412 - 51338350
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaa-attcctaattttatagggaccaaaaacatata 70  Q
    ||||||||||||||||  ||||||||||| || ||||| ||||||||||||||||||||||||||    
T  51338412 tattaaaattaagtaag-gactaaacttaaaatattcc-aattttatagggaccaaaaacatata 51338350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 52881546 - 52881487
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacat 67  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||    
T  52881546 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacat 52881487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 21091003 - 21090942
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| || || | ||||||||| |||||||||||||||    
T  21091003 tattaaaattaagtaag-gactaaacttaaaattttccaattttataaggaccaaaaacatat 21090942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 25352791 - 25352852
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  25352791 tattaaaattaagtaag-gactaaacttaaaagctcacaattttatagggaccaaaaacatat 25352852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 30742674 - 30742735
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  || |||||||||||| ||  |||||||||||||| ||||||||||    
T  30742674 tattaaaattaagtaag-gattaaacttagaaactctcaattttatagggactaaaaacatat 30742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 46517419 - 46517480
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||| ||||||||||    
T  46517419 tattaaaattaagtaag-gactaaacttaaaatgtcccaattttatagggacgaaaaacatat 46517480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 47008975 - 47009036
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||| |||||||  ||| ||||||| ||  |||||||||||||||||||||||||||||    
T  47008975 tattaaaagtaagtaag-gacaaaacttaaaaggtcctaattttatagggaccaaaaacatat 47009036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 48218195 - 48218256
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||| ||||||||||||||||||    
T  48218195 tattaaaattaagtaag-gactaaacttaaaagatcccaattttttagggaccaaaaacatat 48218256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 49767636 - 49767575
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  49767636 tattataattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 49767575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 48410070 - 48410010
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||  ||| ||||||| ||  ||| |||||||||||||||||||||||||    
T  48410070 attaaaattaagtaag-gacaaaacttaaaatgtcccaattttatagggaccaaaaacatat 48410010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 49768766 - 49768810
Alignment:
Q  25 gactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  49768766 gactaaacttaaaagatcccaattttatagggaccaaaaacatat 49768810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47792192 - 47792259
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  47792192 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggaccaaaaacatat 47792259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 38595339 - 38595400
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||    
T  38595339 tattaaaattaagtaag-gactaaacttaaaaattcccaattttatagggaccaaaaacatat 38595400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27727174 - 27727107
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || ||||||||||| |||| |||||||||||||||||||||||||    
T  27727174 aaaacctattaaaattaagtaag-gagtaaacttagaagttcccaattttatagggaccaaaaacatat 27727107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 12932902 - 12932963
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  || ||||||||||||||||||||||||||    
T  12932902 tattaaaattaagtaag-gactaaacttagaaggtcttaattttatagggaccaaaaacatat 12932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 35482401 - 35482462
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||| |||||||| ||| ||  |||||||||||||||||||||||||||||    
T  35482401 tattaaaattaagtaa-tgactaaatttaaaatatcctaattttatagggaccaaaaacatat 35482462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 35482034 - 35481970
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatatata 72  Q
    |||||||||||| |||  |||| |||| |||| |||||||||||||||||||||||||||||||||    
T  35482034 tattaaaattaaataag-gactgaactcagaagttcctaattttatagggaccaaaaacatatata 35481970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6589295 - 6589361
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||| ||||||||||||||||  |||||||||||||| |||  ||||||||| ||||||||||||||    
T  6589295 aaaacctattaaaattaagtaag-gactaaacttagaagttctcaattttatatggaccaaaaacata 6589361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 8832658 - 8832597
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  8832658 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 8832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 12908630 - 12908569
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  ||  |||||||||||||||||||||||||    
T  12908630 tattaaaattaagtaag-gactaaacttagaaggtctcaattttatagggaccaaaaacatat 12908569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 40304536 - 40304597
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  40304536 tattaaaattaagtaag-gactaaacttaaaagatcccaattttatagggaccaaaaacatat 40304597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 1544419 - 1544364
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaa 63  Q
    ||||||||||||||||  |||||||||||||| || ||||||||||| |||||||||    
T  1544419 tattaaaattaagtaag-gactaaacttagaagtttctaattttataaggaccaaaa 1544364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7238525 - 7238458
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||| |||  || ||||||||||| || | |||||||||||||||||||||||||    
T  7238525 aaaacctattaaaattaaataag-gattaaacttagaagttgcaaattttatagggaccaaaaacatat 7238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10620469 - 10620402
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| ||   |||||||||||||||||||| ||||    
T  10620469 aaaacctattaaaattaagtaag-gactaaacttagaagttttcaattttatagggaccaaaaagatat 10620402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 8081759 - 8081698
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| ||||||||||| |||||||||||||    
T  8081759 tattaaaattaagtaag-gactaaacttaaaagatcccaattttataggtaccaaaaacatat 8081698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 14990891 - 14990952
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||| ||||  || |||||||||||  ||| |||||||||||||||||||||||||    
T  14990891 tattaaaattaggtaag-gattaaacttagaaggtcccaattttatagggaccaaaaacatat 14990952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 15420502 - 15420563
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||| ||||  || |||||||||||  ||| |||||||||||||||||||||||||    
T  15420502 tattaaaattaggtaag-gattaaacttagaaggtcccaattttatagggaccaaaaacatat 15420563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 28924845 - 28924906
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  || ||||||||||| |||| ||||||||||||| |||||| ||||    
T  28924845 tattaaaattaagtaag-gattaaacttagaagttcccaattttatagggatcaaaaatatat 28924906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 37107629 - 37107568
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  37107629 tattataattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 37107568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 38593224 - 38593164
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  38593224 tattaaaattaagtaag-gactaaactta-aaggtcccaattttatagggaccaaaaacatat 38593164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 38599322 - 38599383
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  || |||||||||||| | |||||||||||    
T  38599322 tattaaaattaagtaag-gactaaacttagaaggtcgtaattttataggaatcaaaaacatat 38599383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43574584 - 43574645
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaa 63  Q
    ||||| ||||||||||||||||  ||||||||||| || |||| ||||||| |||||||||||    
T  43574584 aaaacatattaaaattaagtaag-gactaaacttaaaagttccaaattttacagggaccaaaa 43574645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 44081299 - 44081360
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||| ||||  | ||||||||||| |||| |||||||||||||||| ||||||||    
T  44081299 tattaaaattaaataaaa-attaaacttagaagttcccaattttatagggaccagaaacatat 44081360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 8833551 - 8833609
Alignment:
Q  9 ttaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||| ||||||| ||| ||  ||| |||||||||||||||||||||||||    
T  8833551 ttaaaattaagtaaa-gactaaatttaaaagatcc-aattttatagggaccaaaaacatat 8833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17742673 - 17742740
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||||    
T  17742673 aaaacctattaaaattaagtaaa-gactaaacttagaagttcccaattttataggaaccaaaaacatat 17742740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9924579 - 9924645
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||| ||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||    
T  9924579 aaaacctattaaaattaagtaag-gattaaacttagaagttcctaattttatagggaccaaaaacata 9924645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4463105 - 4463172
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||    
T  4463105 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggactaaaaacatat 4463172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8404343 - 8404276
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||| || |||||||||||||||||| |||||||||||    
T  8404343 aaaacctattaaaattaagtaag-gactaaacttaaaagttcctaattttatagggatcaaaaacatat 8404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40158610 - 40158677
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||| |||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  40158610 aaaacctattaaaattaactaag-gactaaacttagaagttcccaattttatagggaccaaaaacatat 40158677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 30698625 - 30698563
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  |||||||||||||| || | |||||||||||||||||||||||||    
T  30698625 ttattaaaattaagtaag-gactaaacttagaagtttccaattttatagggaccaaaaacatat 30698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 30733900 - 30733838
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  |||||||||||||| || | |||||||||||||||||||||||||    
T  30733900 ttattaaaattaagtaac-gactaaacttagaagtttccaattttatagggaccaaaaacatat 30733838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 2005377 - 2005442
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatatatat 73  Q
    ||||||||||||||||  ||||||||||||||  ||  |||||||||||||||||||||||||||||    
T  2005377 tattaaaattaagtaac-gactaaacttagaaggtcacaattttatagggaccaaaaacatatatat 2005442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 10674592 - 10674531
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  10674592 tattaaaattaagtaaa-gactaaacttataaggtcccaattttatagggaccaaaaacatat 10674531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 28456537 - 28456476
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||||||    
T  28456537 tattaaaattaagtat-tgactaaacttaaaaggtcctaattttatagggaccaaaaacatat 28456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 34010274 - 34010335
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||||||    
T  34010274 tattaaaattaagcaag-gactaaacttagaagttcccaattttatagggaccaaaaacatat 34010335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9687480 - 9687413
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || ||||||||||| || | |||||||||||||||||||||||||    
T  9687480 aaaacctattaaaattaagtaag-gattaaacttagaagttgccaattttatagggaccaaaaacatat 9687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 19332413 - 19332351
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  19332413 ttattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 19332351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 2263136 - 2263197
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| |||||||||||  |  ||| |||||||||||||||||||||||||    
T  2263136 tattaaaattaagtaaa-gactaaacttaagagatcccaattttatagggaccaaaaacatat 2263197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 3407234 - 3407295
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  3407234 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 3407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 4461906 - 4461845
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||| |||||||||  |||||||| ||||| |||| |||||||||||||||||||||||||    
T  4461906 tattaatattaagtaag-gactaaacatagaagttcccaattttatagggaccaaaaacatat 4461845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 22023412 - 22023473
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  22023412 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 22023473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 32510501 - 32510562
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  || ||||| ||||| |||| |||||||||||||||||||||||||    
T  32510501 tattaaaattaagtaag-gattaaacatagaagttccaaattttatagggaccaaaaacatat 32510562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 36876205 - 36876266
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||   ||||||||||||| || | |||||||||||||||||||||||||    
T  36876205 tattaaaattaagtaaga-actaaacttagaagtttccaattttatagggaccaaaaacatat 36876266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 4462522 - 4462463
Alignment:
Q  9 ttaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  4462522 ttaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 4462463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34785199 - 34785132
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||| | ||| ||||||||||||||| || |||||||    
T  34785199 aaaacctattaaaattaagtaag-gactaaacttagtagttcgtaattttatagggactaagaacatat 34785132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 28615971 - 28615911
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||| ||||||||||||||  |||||||||| ||||||||| ||||    
T  28615971 tattaaaattaagtaa--gacaaaacttagaaattctcaattttatagagaccaaaaatatat 28615911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 37812230 - 37812172
Alignment:
Q  10 taaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  37812230 taaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 37812172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 17742284 - 17742223
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||   |||||||||| ||  ||| |||||||||||||||||||||||||    
T  17742284 tattaaaattaagtaaga-actaaacttaaaaggtcccaattttatagggaccaaaaacatat 17742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 30394434 - 30394495
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  ||  |||||||||| ||||||||||||||    
T  30394434 tattaaaattaagtaag-gactaaacttagaatgtcgcaattttatagagaccaaaaacatat 30394495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 40158215 - 40158154
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||| ||||||||||    
T  40158215 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggactaaaaacatat 40158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 42877954 - 42878015
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  42877954 tattaaaattaagtaag-gactaaacttaaaaggtctcaattttatagggaccaaaaacatat 42878015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 43210973 - 43211034
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| ||||||||||||| |||||||||||    
T  43210973 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggatcaaaaacatat 43211034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 314760 - 314808
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaatttt 50  Q
    |||| |||||||||||||||||| |||||||||||||| |||| ||||||    
T  314760 aaaaattattaaaattaagtaaa-gactaaacttagaagttccaaatttt 314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 621576 - 621509
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||| ||||||||||||| |||  |||||||||| ||| |||| |||||||||||||  ||||||||||    
T  621576 aaaatttattaaaattaattaag-gactaaacttggaagttcccaattttatagggataaaaaacatat 621509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37103377 - 37103444
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || ||||||||||| || | ||||||||||| | |||||||||||    
T  37103377 aaaacctattaaaattaagtaag-gattaaacttagaagtttccaattttataggaatcaaaaacatat 37103444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33031361 - 33031428
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||||||    
T  33031361 aaaacctattaaaattaagtaa-tgactaaacttagaagttcctaattttataggtatcaaaaacatat 33031428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 42274237 - 42274181
Alignment:
Q  12 aaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  42274237 aaattaagtaag-gactaaacttagaagttcctaattttatagggaccaaaaacatat 42274181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41121085 - 41121152
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| || ||||||||||||||||||||||    
T  41121085 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaactttatagggaccaaaaacatat 41121152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33832073 - 33832007
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||| |||||||||||||    
T  33832073 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagagaccaaaaacata 33832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29809203 - 29809136
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || |||||||||  ||||| |||||||||||||||||||||||||    
T  29809203 aaaacctattaaaattaagtaag-gattaaacttagtcattcccaattttatagggaccaaaaacatat 29809136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13371944 - 13371874
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatatata 72  Q
    ||||| ||||||||||||||||  || |||||||| || || | ||||||||||||||||||||||||||||    
T  13371944 aaaacctattaaaattaagtaag-gattaaacttaaaagtttccaattttatagggaccaaaaacatatata 13371874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 8392673 - 8392733
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||  ||||||| ||||||  ||| |||||||||||||||||||||||||    
T  8392673 attaaaattaagtaag-gactaaatttagaaggtcccaattttatagggaccaaaaacatat 8392733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14201306 - 14201373
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||| ||  ||||||| ||||||| |||| ||||||||||||| ||||||||||    
T  14201306 aaaacctattaaaattaagcaag-gactaaaattagaaagtcctgattttatagggactaaaaacatat 14201373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19176718 - 19176651
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||||| ||| ||||||||||  |||||| |||| ||||||||| ||||||||||    
T  19176718 aaaacctattaaaattaagt-aataactaaacttaagaattcccaattctatagggactaaaaacatat 19176651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35498897 - 35498963
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||| ||||||||||||||||  ||||||||||| || |||  ||||||||||||| ||||||||||    
T  35498897 aaaacctattaaaattaagtaag-gactaaacttaaaagttctcaattttatagggatcaaaaacata 35498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 3117925 - 3117864
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  3117925 tattaaaattaagtaag-gactaaacttaaaagatctcaattttatagggaccaaaaacatat 3117864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 10357668 - 10357729
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||| ||||||  |||||||||||||| || | |||||||||||||| ||||||||||    
T  10357668 tattaaaatcaagtaag-gactaaacttagaagtttccaattttatagggacaaaaaacatat 10357729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 30982736 - 30982796
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  30982736 tattaaaattaagtaag-gactaaactta-aaggtcccaattttatagggaccaaaaacatat 30982796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 31435988 - 31435927
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| ||||||||||| ||  ||  |||||||||||||| ||||||||||    
T  31435988 tattaaaattaagtaaa-gactaaacttaaaaggtctcaattttatagggactaaaaacatat 31435927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 32318166 - 32318105
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  32318166 tattataattaagtaag-gactaaacttaaaagatcccaattttatagggaccaaaaacatat 32318105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 35498520 - 35498459
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| ||||||||||| ||  ||| ||||||||||| || ||||||||||    
T  35498520 tattaaaattaagtaaa-gactaaacttaaaaggtcccaattttataggaactaaaaacatat 35498459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 41120692 - 41120631
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| ||||||||||||| |||||||||||    
T  41120692 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggatcaaaaacatat 41120631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 44287027 - 44287088
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||  || | || |||||||||||||||||||||||||    
T  44287027 tattaaaattaagtaag-gactaaacttgaaagtccccaattttatagggaccaaaaacatat 44287088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 13027791 - 13027851
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  13027791 attaaaattaagtaag-gactaaacttaaaatgtctcaattttatagggaccaaaaacatat 13027851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 13372266 - 13372324
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacat 67  Q
    ||||||||||||||||  ||||||||||  ||  ||| |||||||||||||||||||||||    
T  13372266 tattaaaattaagtaa--gactaaacttgaaaggtccaaattttatagggaccaaaaacat 13372324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 7655057 - 7655119
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatata 70  Q
    |||||||||||||||||   |||||||||| ||| ||| |||||||||||||| |||||||||||    
T  7655057 ttattaaaattaagtaaga-actaaactta-aaagtcccaattttatagggacaaaaaacatata 7655119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8737776 - 8737714
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaac 65  Q
    ||||| ||||||||||||||||  || ||||||||||| |||| ||||||||| |||||||||||    
T  8737776 aaaacctattaaaattaagtaag-gattaaacttagaagttcccaattttata-ggaccaaaaac 8737714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30784520 - 30784586
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||| |||| |||||| || |||  ||||| |||||||||||||||||||    
T  30784520 aaaacctattaaaattaagtaaa-gactgaacttaaaagttctcaattt-atagggaccaaaaacatat 30784586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 31771686 - 31771730
Alignment:
Q  25 gactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| |||||  ||||||||||||| |||||||||    
T  31771686 gactaaacttagaagttcctcgttttatagggaccgaaaacatat 31771730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 36512322 - 36512380
Alignment:
Q  9 ttaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||| |||| ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  36512322 ttaaaattaaataaa-gactaaacttaaaaggtcc-aattttatagggaccaaaaacatat 36512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40364835 - 40364768
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||| || || || | ||||||||||||||||||| |||||    
T  40364835 aaaacctattaaaattaagtaag-gactaaacctaaaagtttccaattttatagggaccaaaagcatat 40364768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44286635 - 44286568
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||| |||   |||||||||| || |||||||||||||| ||| |||||||||||    
T  44286635 aaaacctattaaaattaattaaga-actaaacttaaaagttcctaattttataaggatcaaaaacatat 44286568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 53377618 - 53377679
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||    
T  53377618 tattaaaattaagtaag-gactaaacttagaagttcctaattttatagggactaaaaacatat 53377679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14525134 - 14525201
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||||||||||| || ||||||||||| ||||||||||    
T  14525134 aaaacctattaaaattaagtaag-gactaaacttagaaattcccaaatttatagggacgaaaaacatat 14525201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23917665 - 23917732
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||    
T  23917665 aaaacctattaaaattaagtaag-gactaaacttagaaattctcaattttatagggaccaaaaaaatat 23917732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45419734 - 45419667
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||| |||| |||| |||||||||||||||||||||||||    
T  45419734 aaaacctattaaaattaagtaag-gactaaactcagaagttcccaattttatagggaccaaaaacatat 45419667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 34995882 - 34995943
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||  |||| |||||||||||||||||||||||||    
T  34995882 tattaaaattaagtaag-gactaaacttagatgttcccaattttatagggaccaaaaacatat 34995943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29348618 - 29348685
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| ||| ||||||||||||||| || |||||||    
T  29348618 aaaacctattaaaattaagtaag-gactaaacttagaagttcgtaattttatagggactaagaacatat 29348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44808788 - 44808721
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| ||| ||||||||||||||  ||||||||||    
T  44808788 aaaacctattaaaattaagtaag-gactaaacttagaagttcgtaattttatagggattaaaaacatat 44808721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 29348227 - 29348165
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  29348227 ttattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 29348165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 33225738 - 33225677
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  ||  |||||||||||||||||||||||||    
T  33225738 tattaaaattaagtaag-gactaaacttagaagatctcaattttatagggaccaaaaacatat 33225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 52701111 - 52701050
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  52701111 tattaaaattaagtaaa-gactaaacttaaaaggtctcaattttatagggaccaaaaacatat 52701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 52702005 - 52702066
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||| | ||| ||| |||||||||||||||||||||||||    
T  52702005 tattaaaattaagtaag-gactaaactaaaaaagtcccaattttatagggaccaaaaacatat 52702066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 54268797 - 54268736
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||  |||||||||| |||||   |||||||||||||||||||||||||    
T  54268797 tattaaaattaagtaaaa-actaaacttataaattttcaattttatagggaccaaaaacatat 54268736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11294138 - 11294202
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaaca 66  Q
    ||||| ||||||||||||||||| || ||||||||||| |||  |||||||||| |||||||||||    
T  11294138 aaaacctattaaaattaagtaaa-gattaaacttagaagttctcaattttatagagaccaaaaaca 11294202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11045750 - 11045816
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||| ||||||   ||||||||||||| |||| ||||||||||||| |||||||||||    
T  11045750 aaaacttattaaaat-aagtaaga-actaaacttagaagttcccaattttatagggatcaaaaacatat 11045816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40762550 - 40762483
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||| ||||||||| |||| ||||| ||||    
T  40762550 aaaacctattaaaattaagtaag-gactaaacttaaaaattcccaattttataaggactaaaaatatat 40762483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 32146952 - 32146891
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcct-aattttatagggaccaaaaacatat 69  Q
    |||||||||||||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||    
T  32146952 tattaaaattaagtaa-tgactaaactta-aaatgcctcaattttatagggactaaaaacatat 32146891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 19601903 - 19601964
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||| |||||| || || |||||||||||||| | ||||||||| |||||||||||||||    
T  19601903 tattaaatttaagtgaa-gattaaacttagaaatttccaattttatatggaccaaaaacatat 19601964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 31991017 - 31990956
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||| || |||||||| ||  ||  |||||||||||||||||||||||||    
T  31991017 tattaaaattaagtaaa-gattaaacttaaaaggtctcaattttatagggaccaaaaacatat 31990956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 33226764 - 33226825
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||   |||||||||||||  ||  |||||||||||||||||||||||||    
T  33226764 tattaaaattaagtaaga-actaaacttagaaggtctcaattttatagggaccaaaaacatat 33226825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 41928183 - 41928244
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  41928183 tattataattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 41928244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 44809182 - 44809243
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  | | |||||||||||||||||||||||||    
T  44809182 tattaaaattaagtaag-gactaaacttaaaaggttccaattttatagggaccaaaaacatat 44809243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 53518129 - 53518190
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||| ||||||||||    
T  53518129 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggactaaaaacatat 53518190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23883683 - 23883739
Alignment:
Q  12 aaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||  ||||||||||  ||| ||| |||||||||||||||||||||||||    
T  23883683 aaattaagtaag-gactaaacttgaaaagtcccaattttatagggaccaaaaacatat 23883739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 27492683 - 27492727
Alignment:
Q  25 gactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||    
T  27492683 gactaaacttagaagttctcaattttatagggatcaaaaacatat 27492727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34995495 - 34995428
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||| |||| ||  ||  |||||||||||||||||||||||||    
T  34995495 aaaacctattaaaattaagtaag-gactaatcttaaaaggtctcaattttatagggaccaaaaacatat 34995428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 44556964 - 44557008
Alignment:
Q  25 gactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  44556964 gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 44557008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8710185 - 8710252
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||   ||||||||||||| |||| |||||||||||||||||||||||||    
T  8710185 aaaacctattaaaattaagtaaga-actaaacttagaagttcccaattttatagggaccaaaaacatat 8710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30493055 - 30493122
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||| || |||||||| || |||| |||||||||||||||||||||||||    
T  30493055 aaaacctattaaaattaagtaaa-gaataaacttaaaagttcccaattttatagggaccaaaaacatat 30493122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 30492672 - 30492611
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||| ||| |||||||||||||||||||||||||    
T  30492672 tattaaaattaagtaag-gactaaacttaaaaagtcccaattttatagggaccaaaaacatat 30492611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 3914766 - 3914826
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||  ||||||||||| ||| ||| |||||||||||||||||||||||||    
T  3914766 attaaaattaagtaag-gactaaacttaaaaagtcccaattttatagggaccaaaaacatat 3914826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1821323 - 1821390
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| |||||||||||| |||  ||||||||| |||| |||| |||||||||||||||||||||||||    
T  1821323 aaaacctattaaaattaaataag-gactaaactcagaatttcccaattttatagggaccaaaaacatat 1821390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5087141 - 5087074
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| || | ||||||||||| |||||||||||||    
T  5087141 aaaacctattaaaattaagtaag-gactaaacttagaagtttccaattttataggaaccaaaaacatat 5087074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5974257 - 5974190
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||   ||||||||||||| |||  |||||||||||||||||||||||||    
T  5974257 aaaacctattaaaattaagtaaga-actaaacttagaagttctcaattttatagggaccaaaaacatat 5974190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10915652 - 10915719
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || ||||||||||| || | |||||||||||||||||||||||||    
T  10915652 aaaacctattaaaattaagtaag-gattaaacttagaagttgccaattttatagggaccaaaaacatat 10915719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28476168 - 28476101
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||| ||||  ||||||||||| || ||| ||||||||||||||||||||||||||    
T  28476168 aaaacctattaaaattatgtaag-gactaaacttataagttcttaattttatagggaccaaaaacatat 28476101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 3913209 - 3913148
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  3913209 tattaaaattaagtaag-gactaaacttaaaagatcccaattttatagggaccaaaaacatat 3913148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17697338 - 17697271
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||| ||  ||||||||||| || |||  |||||||||||||||||||||||||    
T  17697338 aaaacctattaaaattaagcaag-gactaaacttaaaagttctcaattttatagggaccaaaaacatat 17697271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 844460 - 844523
Alignment:
Q  7 tattaaaattaagtaaatg-actaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||| |||| | ||||||||||||| ||||  |||||||||||| |||||||||||    
T  844460 tattaaaattaaataaaaggactaaacttagaagttccctattttatagggatcaaaaacatat 844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 30660730 - 30660668
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| ||  ||||||||||| ||| ||  |||||||||||||||||||||||||    
T  30660730 ttattaaaattaagcaag-gactaaacttaaaaagtctcaattttatagggaccaaaaacatat 30660668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 939188 - 939249
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| || |||  ||||||||| |||||||||||||||    
T  939188 tattaaaattaagtaag-gactaaacttaaaagttctcaattttatatggaccaaaaacatat 939249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 5086766 - 5086827
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  5086766 tattataattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 5086827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 18804133 - 18804194
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  18804133 tattaaaattaagtaag-gactaaacttaaaatatctcaattttatagggaccaaaaacatat 18804194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 33518702 - 33518763
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||| |||||||||||| ||  ||| |||||||||| ||| ||||||||||    
T  33518702 tattaaaattaagtaa-tgactaaacttaaaagatcccaattttatagagactaaaaacatat 33518763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 33744604 - 33744543
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  33744604 tattaaaattaagtaag-gactaaacttaaaaggtcgcaattttatagggaccaaaaacatat 33744543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2937325 - 2937391
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||||| ||  |||||| |||||| |||| |||||||||  ||||||||||||||    
T  2937325 aaaacttattaaaattaagt-aagaactaaatttagaagttcccaattttata-agaccaaaaacatat 2937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20510812 - 20510879
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  ||||||  |||||| || | ||||||||||||| |||||||||||    
T  20510812 aaaacctattaaaattaagtaag-gactaagattagaagtttccaattttatagggaacaaaaacatat 20510879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29691861 - 29691794
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||| ||||  ||||||||||| || |||  |||||||||| ||||||||||||||    
T  29691861 aaaacctattaaaattatgtaag-gactaaacttataagttctcaattttatagagaccaaaaacatat 29691794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 30394776 - 30394820
Alignment:
Q  25 gactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||    
T  30394776 gactaaacttagaagttctcaattttattgggaccaaaaacatat 30394820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7491037 - 7491104
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||| || ||||||| ||||||| ||||||||||||||| ||||||||||    
T  7491037 aaaacctattaaaattaagtaaa-gaataaactttgaaattcttaattttatagggactaaaaacatat 7491104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28448339 - 28448272
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||    
T  28448339 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggtccaaaaacatat 28448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51395562 - 51395495
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||||||||  |||||||||||||| ||||  |||||||||| |||||||||||||    
T  51395562 aaaacttattaaaattaagtaag-gactaaacttagaagttccctattttataggaaccaaaaacatat 51395495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 55283459 - 55283521
Alignment:
Q  6 ttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||||| |||||||||||||| || | ||||||||| |||||||||||||||    
T  55283459 ttattaaaattaagtaaa-gactaaacttagaagtttccaattttatacggaccaaaaacatat 55283521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7499088 - 7499155
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||| || ||||||||||| |||  ||||||||| |||||||||||||||    
T  7499088 aaaacctattaaaattaagtaaa-gaataaacttagaagttctcaattttataaggaccaaaaacatat 7499155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 13508817 - 13508756
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||| |||||||||||||||||||||||||    
T  13508817 tattaaaattaagtaag-gactaaacttaaaaggtcccaattttatagggaccaaaaacatat 13508756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 22068450 - 22068511
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| || | |||||||||||||||| ||||||||    
T  22068450 tattaaaattaagtaag-gactaaacttagaagtttccaattttatagggaccagaaacatat 22068511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 38499640 - 38499701
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||||||||||| ||| ||||    
T  38499640 tattaaaattaagtaag-gactaaacttagaagttccaaattttatagggaccacaaatatat 38499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 47379121 - 47379060
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| |||| | |||||||||||||| ||||||||    
T  47379121 tattaaaattaagtaag-gactaaacttagaagttcccagttttatagggaccagaaacatat 47379060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 52947705 - 52947644
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||  || | |||||||||||||||||||||||||    
T  52947705 tattaaaattaagtaag-gactaaacttagatgtttccaattttatagggaccaaaaacatat 52947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 4850447 - 4850511
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatatata 72  Q
    ||||||||||||||||  ||| |||||||||| | |||||||||| ||||| ||||||||||||||    
T  4850447 tattaaaattaagtaag-gacgaaacttagaagtacctaattttagagggatcaaaaacatatata 4850511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 43938286 - 43938346
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||| ||||||||  |||||||||||||| |||  |||||||||||||||||||||||||    
T  43938286 attaaagttaagtaag-gactaaacttagaagttctcaattttatagggaccaaaaacatat 43938346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47463710 - 47463777
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||  ||| |||| ||||||||| |||||||||||||||    
T  47463710 aaaacctattaaaattaagtaag-gactaaactcggaagttcccaattttataaggaccaaaaacatat 47463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 52948100 - 52948167
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||| |||| ||  || ||||||||||||||||||||||||||    
T  52948100 aaaacctattaaaattaagtaag-gactaatcttaaaagatcttaattttatagggaccaaaaacatat 52948167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 14579074 - 14579135
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| | || |||||||||| || |||||||||||    
T  14579074 tattaaaattaagtaag-gactaaacttagaagtacccaattttatagagatcaaaaacatat 14579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 28164068 - 28164128
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| |  ||||||||||| ||| ||| |||||||||||||||||||||||||    
T  28164068 tattaaaattaagttag-gactaaactta-aaagtcccaattttatagggaccaaaaacatat 28164128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 31470912 - 31470851
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||| |||||||||||| ||  ||  |||||||||||||| ||||||||||    
T  31470912 tattaaaattaagtaa-tgactaaacttaaaatgtctcaattttatagggactaaaaacatat 31470851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 48738458 - 48738397
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  48738458 tattaaaattaagtaag-gactaaacttaaaagatctcaattttatagggaccaaaaacatat 48738397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 38114558 - 38114618
Alignment:
Q  8 attaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||| ||| |||||||  ||  |||| ||||||||||||||||||||||||    
T  38114558 attaaaattaagtaa-tgattaaacttgaaaggtccttattttatagggaccaaaaacatat 38114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 45558011 - 45558052
Alignment:
Q  28 taaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||| ||| ||| |||||||||||||||||||||||||    
T  45558011 taaacttaaaaactcccaattttatagggaccaaaaacatat 45558052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 48082797 - 48082857
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||||||||||||||  |||| |||||||||  ||  ||||||||||||||||||||||||    
T  48082797 tattaaaattaagtaag-gacttaacttagaaggtcgcaattttatagggaccaaaaacata 48082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3872994 - 3872927
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || |||||||| ||  |||  ||||||||||||||||||||||||    
T  3872994 aaaacctattaaaattaagtaag-gattaaacttaaaaggtccctattttatagggaccaaaaacatat 3872927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23473430 - 23473363
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||| ||||||||||||| ||||| |||||||||| || |||| |||||||||  ||| ||||||||||    
T  23473430 aaaaattattaaaattaaataaat-actaaacttaaaagttcccaattttataaagactaaaaacatat 23473363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 17320 - 17259
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  || |||||||||||||||  |||||||||||||||||||||||||    
T  17320 tattaaaattaagtaag-gattaaacttagaaattctcaattttatagggaccaaaaacatat 17259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 697 - 639
Alignment:
Q  10 taaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||| |||||||||||||| ||   |||||||||||||||||||||||||    
T  697 taaaattaagtaaa-gactaaacttagaagtttacaattttatagggaccaaaaacatat 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 1019 - 1079
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    ||||||||||||||||  ||||||||||| ||||| | |||||||||||||||| |||||||    
T  1019 tattaaaattaagtaag-gactaaacttaaaaatttccaattttatagggaccagaaacata 1079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6130 - 6074
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggac 58  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  6130 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagggac 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 6520 - 6581
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||| ||  ||  |||||||||||||||||||||||||    
T  6520 tattaaaattaagtaag-gactaaacttaaaatgtctcaattttatagggaccaaaaacatat 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 151 - 84
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||| ||| ||||| ||||    
T  151 aaaacctattaaaattaagtaag-gactaaacttagaagttcccaattttatagtgacaaaaaatatat 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32912 - 32846
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacata 68  Q
    |||| ||||||||||||| |||| |||||||||||||| || | || ||||||| |||||||||||||    
T  32912 aaaagttattaaaattaaataaa-gactaaacttagaagtttcaaaatttatagagaccaaaaacata 32846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 1539 - 1600
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||   |||||| |||||| |||| |||||||||||||||||||| ||||    
T  1539 tattaaaattaagtaaga-actaaatttagaagttcccaattttatagggaccaaaaatatat 1600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 7246 - 7307
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||||||||||||||| |||||||||||| ||  ||| |||||||||| ||| ||||||||||    
T  7246 tattaaaattaagtaa-tgactaaacttaaaagatcccaattttatagagactaaaaacatat 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 3834 - 3773
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  ||||||||||||||  ||  |||||||| ||||||||||||||||    
T  3834 tattaaaattaagtaag-gactaaacttagaaggtcgcaattttattgggaccaaaaacatat 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 238301 - 238240
Alignment:
Q  7 tattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||||||||||||||  |||||||||||||| | || |||||||||| || |||||||||||    
T  238301 tattaaaattaagtaag-gactaaacttagaagtacccaattttatagagatcaaaaacatat 238240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3813 - 3746
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    ||||| ||||||||||||||||  || |||||||| ||  |||  ||||||||||||||||||||||||    
T  3813 aaaacctattaaaattaagtaag-gattaaacttaaaaggtccctattttatagggaccaaaaacatat 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24791 - 24725
Alignment:
Q  1 aaaacttattaaaattaagtaaatgactaaacttagaaattcctaattttatagggaccaaaaacatat 69  Q
    |||| ||||| ||||||| ||||| ||||||||||||| |||| ||||||||| ||| |||||||||||    
T  24791 aaaaattattcaaattaattaaat-actaaacttagaagttccaaattttataagga-caaaaacatat 24725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University