View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11959_low_57 (Length: 249)
Name: NF11959_low_57
Description: NF11959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11959_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 50411151 - 50411025
Alignment:
| Q |
19 |
aggatgttgttcatcgtgaaggtttggaaaataaccaggaagagtgcattgatcaggaacaacaatttgtgagttctgatgcacattgtggtcagagtag |
118 |
Q |
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| T |
50411151 |
aggatgttgttcatcgtgaaggtttggaaaataaccaggaagagtgcattgatcaggaacaacaatttgtgagttctgatgcacattgtggtcagagtag |
50411052 |
T |
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| Q |
119 |
taaaatctgtgtcagaggcggttacgg |
145 |
Q |
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||||||||| ||||||||||||||||| |
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| T |
50411051 |
taaaatctgcgtcagaggcggttacgg |
50411025 |
T |
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