View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11960_low_10 (Length: 283)
Name: NF11960_low_10
Description: NF11960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11960_low_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 7 - 283
Target Start/End: Original strand, 36215565 - 36215842
Alignment:
| Q |
7 |
gaagcagagattataagaaaatgaaagcatgaagaagagaaaagtacttacattgaaagagagactgatagaacctttgaggaaaaatgggcagtgaccc |
106 |
Q |
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| T |
36215565 |
gaagcagtgattataagaaattgaaagcatgaagaagagaaaagtacttacattgaaagagagactgatagaacgtttgaggaaaaatgggcagtgaccc |
36215664 |
T |
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| Q |
107 |
aaaattccctagtggaagaaatgtgttgaagaacccaatttgatattttatttttgttattgtatgtatgtctgttttgagaaaagggcaaaaagggaat |
206 |
Q |
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| T |
36215665 |
aaaattccctagtggaagaaatgtgttgaagaacccaatttgatattttatttttgttattttatgtatgtctgttttgagaaaagggcaaaaagggaat |
36215764 |
T |
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| Q |
207 |
ataaaatgtggtaagtagggtttgtgtttgataaaacagaaggcagaggcaaaa-gggaagagaatttcgaggttaat |
283 |
Q |
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| T |
36215765 |
ataaaatgtggtaagtggggtttgtgtttgataaaacagaaggcagaggcaaaaggggaagaggatttcgaggttaat |
36215842 |
T |
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