View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11960_low_11 (Length: 245)

Name: NF11960_low_11
Description: NF11960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11960_low_11
NF11960_low_11
[»] chr1 (22 HSPs)
chr1 (9-55)||(28399237-28399283)
chr1 (9-56)||(32301504-32301551)
chr1 (9-58)||(20411736-20411785)
chr1 (191-232)||(28399426-28399467)
chr1 (9-56)||(10304744-10304791)
chr1 (9-56)||(26097913-26097960)
chr1 (11-58)||(45750642-45750689)
chr1 (9-55)||(4882267-4882313)
chr1 (1-55)||(8737517-8737571)
chr1 (8-58)||(13488443-13488493)
chr1 (9-58)||(7995468-7995517)
chr1 (9-58)||(14265448-14265497)
chr1 (9-58)||(15391160-15391209)
chr1 (8-53)||(15791182-15791227)
chr1 (1-58)||(17347761-17347818)
chr1 (9-58)||(28678038-28678087)
chr1 (13-58)||(29726509-29726554)
chr1 (9-58)||(33486938-33486987)
chr1 (9-58)||(44517311-44517360)
chr1 (9-57)||(3232953-3233001)
chr1 (9-57)||(32784244-32784292)
chr1 (9-57)||(32878873-32878921)
[»] chr7 (26 HSPs)
chr7 (9-58)||(37593283-37593332)
chr7 (9-58)||(10094605-10094654)
chr7 (1-46)||(15017276-15017321)
chr7 (9-58)||(24988388-24988437)
chr7 (9-58)||(38277008-38277057)
chr7 (9-57)||(9719881-9719929)
chr7 (9-57)||(24320131-24320179)
chr7 (9-57)||(42644837-42644885)
chr7 (9-56)||(11833184-11833231)
chr7 (9-56)||(27050371-27050418)
chr7 (2-57)||(31703373-31703428)
chr7 (1-48)||(40761762-40761809)
chr7 (9-56)||(48304301-48304348)
chr7 (9-58)||(1281045-1281094)
chr7 (9-54)||(9785485-9785530)
chr7 (9-58)||(21603624-21603673)
chr7 (9-58)||(21990826-21990875)
chr7 (9-58)||(36579249-36579298)
chr7 (9-58)||(39532883-39532932)
chr7 (9-58)||(45482228-45482277)
chr7 (9-58)||(46025937-46025986)
chr7 (9-57)||(10574546-10574594)
chr7 (9-57)||(28664849-28664897)
chr7 (10-58)||(29352390-29352438)
chr7 (9-57)||(41288121-41288169)
chr7 (1-57)||(43256450-43256506)
[»] chr8 (23 HSPs)
chr8 (2-55)||(24210408-24210461)
chr8 (9-58)||(30026798-30026847)
chr8 (9-57)||(2234386-2234434)
chr8 (9-56)||(19720175-19720222)
chr8 (9-58)||(7579771-7579820)
chr8 (9-58)||(10338738-10338787)
chr8 (9-58)||(12329791-12329840)
chr8 (9-58)||(37612817-37612866)
chr8 (9-57)||(22787657-22787705)
chr8 (9-57)||(39067605-39067653)
chr8 (9-56)||(10334342-10334389)
chr8 (9-56)||(14600614-14600661)
chr8 (10-57)||(42261099-42261146)
chr8 (9-55)||(31407664-31407710)
chr8 (9-58)||(4757329-4757378)
chr8 (9-58)||(9501750-9501799)
chr8 (9-54)||(32778873-32778918)
chr8 (9-58)||(41361896-41361945)
chr8 (9-58)||(43937093-43937142)
chr8 (9-57)||(2025140-2025188)
chr8 (21-57)||(2968697-2968733)
chr8 (9-57)||(10633097-10633145)
chr8 (9-57)||(37128403-37128451)
[»] chr6 (14 HSPs)
chr6 (9-58)||(15590016-15590065)
chr6 (1-58)||(31937320-31937377)
chr6 (1-56)||(31705331-31705386)
chr6 (8-58)||(23654414-23654464)
chr6 (9-58)||(19402718-19402767)
chr6 (9-58)||(23638028-23638077)
chr6 (9-58)||(35219821-35219870)
chr6 (1-58)||(1915086-1915143)
chr6 (9-58)||(2304746-2304795)
chr6 (9-58)||(4921789-4921838)
chr6 (9-58)||(23101316-23101365)
chr6 (11-56)||(29284919-29284964)
chr6 (9-57)||(8693562-8693610)
chr6 (5-41)||(12342941-12342977)
[»] chr4 (28 HSPs)
chr4 (9-58)||(7060487-7060536)
chr4 (9-56)||(22121612-22121659)
chr4 (9-58)||(477920-477969)
chr4 (9-58)||(32616767-32616816)
chr4 (9-58)||(36124256-36124305)
chr4 (9-58)||(39837759-39837808)
chr4 (9-58)||(56236730-56236779)
chr4 (13-57)||(6882121-6882165)
chr4 (1-57)||(12717017-12717073)
chr4 (9-57)||(13586148-13586196)
chr4 (9-57)||(24825814-24825862)
chr4 (9-41)||(37431358-37431390)
chr4 (11-58)||(27394994-27395041)
chr4 (9-55)||(22757261-22757307)
chr4 (9-58)||(394182-394231)
chr4 (9-58)||(2447964-2448013)
chr4 (9-58)||(8712694-8712743)
chr4 (9-58)||(11210221-11210270)
chr4 (9-58)||(12754327-12754376)
chr4 (9-58)||(13965724-13965773)
chr4 (9-58)||(20399811-20399860)
chr4 (9-58)||(26742371-26742420)
chr4 (9-58)||(38944056-38944105)
chr4 (9-58)||(42197717-42197766)
chr4 (9-58)||(43244289-43244338)
chr4 (9-57)||(24568621-24568669)
chr4 (9-57)||(25658332-25658380)
chr4 (9-57)||(53647797-53647845)
[»] chr5 (13 HSPs)
chr5 (8-58)||(29097953-29098003)
chr5 (8-58)||(33164375-33164425)
chr5 (9-58)||(980937-980986)
chr5 (9-57)||(2555258-2555306)
chr5 (9-57)||(6635413-6635461)
chr5 (9-57)||(26294965-26295013)
chr5 (8-58)||(17331492-17331542)
chr5 (9-58)||(6281208-6281257)
chr5 (9-58)||(11858074-11858123)
chr5 (9-58)||(17096149-17096198)
chr5 (9-54)||(17732294-17732339)
chr5 (9-58)||(42396420-42396469)
chr5 (9-41)||(42609325-42609357)
[»] chr3 (20 HSPs)
chr3 (8-58)||(11819247-11819297)
chr3 (9-58)||(35174872-35174921)
chr3 (9-57)||(22485130-22485178)
chr3 (9-57)||(48855042-48855090)
chr3 (9-57)||(55455030-55455078)
chr3 (9-48)||(3312618-3312657)
chr3 (11-58)||(36624613-36624660)
chr3 (9-56)||(47733793-47733840)
chr3 (11-58)||(49628013-49628060)
chr3 (8-58)||(33637567-33637617)
chr3 (9-58)||(3457103-3457152)
chr3 (9-58)||(13701917-13701966)
chr3 (9-58)||(14585626-14585675)
chr3 (9-58)||(30156197-30156246)
chr3 (9-58)||(31270490-31270539)
chr3 (9-54)||(40013188-40013233)
chr3 (9-58)||(53402785-53402834)
chr3 (9-58)||(53962282-53962331)
chr3 (9-58)||(54706631-54706680)
chr3 (9-57)||(53155346-53155394)
[»] chr2 (27 HSPs)
chr2 (9-55)||(13548809-13548855)
chr2 (1-55)||(43696035-43696089)
chr2 (9-58)||(4426566-4426615)
chr2 (9-58)||(9978577-9978626)
chr2 (9-58)||(10286915-10286964)
chr2 (9-58)||(22597299-22597348)
chr2 (9-58)||(32314606-32314655)
chr2 (9-58)||(34471130-34471179)
chr2 (9-58)||(43474036-43474085)
chr2 (1-41)||(6510663-6510703)
chr2 (10-58)||(15920039-15920086)
chr2 (9-57)||(18089305-18089353)
chr2 (9-57)||(35333670-35333718)
chr2 (9-56)||(5754454-5754501)
chr2 (9-58)||(4732234-4732283)
chr2 (9-58)||(11798431-11798480)
chr2 (9-58)||(12704851-12704900)
chr2 (3-56)||(13740562-13740615)
chr2 (9-54)||(20561040-20561085)
chr2 (9-58)||(28231005-28231054)
chr2 (9-58)||(28261796-28261845)
chr2 (9-58)||(33012212-33012261)
chr2 (9-58)||(34962984-34963033)
chr2 (9-58)||(38535213-38535262)
chr2 (9-57)||(823866-823914)
chr2 (9-57)||(38384365-38384413)
chr2 (9-57)||(44942451-44942499)
[»] scaffold1350 (1 HSPs)
scaffold1350 (9-58)||(1738-1787)
[»] scaffold0294 (1 HSPs)
scaffold0294 (9-58)||(3975-4024)
[»] scaffold0155 (1 HSPs)
scaffold0155 (9-56)||(35250-35297)
[»] scaffold0007 (1 HSPs)
scaffold0007 (2-41)||(201952-201991)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-46)||(3076-3121)
[»] scaffold0121 (1 HSPs)
scaffold0121 (9-58)||(13153-13202)


Alignment Details
Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 28399237 - 28399283
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28399237 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 28399283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 32301551 - 32301504
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  32301551 tcaaagctaatctttcaacctgaatcaaataaacaccgcattaagacg 32301504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 20411785 - 20411736
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  20411785 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 20411736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 28399426 - 28399467
Alignment:
Q  191 aggaacgattctagataagattaactctaaatcacccctatt 232  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  28399426 aggagcgattctaggtaagattaactctaaatcacccctatt 28399467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10304791 - 10304744
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||||||||||| ||||||||||||| ||| || |||||||    
T  10304791 tcaaagctaatatttcaacttgaatcaaataaacaccacactaagacg 10304744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 26097913 - 26097960
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| |||||||||||||||||| | |||||||    
T  26097913 tcaaagctaatttttcaacctgaatcaaataaataccgtactaagacg 26097960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 45750689 - 45750642
Alignment:
Q  11 aaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  45750689 aaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 45750642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4882267 - 4882313
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  4882267 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 4882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8737571 - 8737517
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| || ||| ||||||    
T  8737571 gcacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 13488443 - 13488493
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| ||||| ||||||| |||||| |||||||||    
T  13488443 ttcaaagctaatctttcaacctgaattaaataaacaccgcactaagacggg 13488493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7995468 - 7995517
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| ||| || |||||||||    
T  7995468 tcaaagctaatctttcaacctgaatcaaataaacaccacactaagacggg 7995517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 14265497 - 14265448
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  14265497 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 14265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 15391160 - 15391209
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  15391160 tcaaagataatctttcaacctgaatcaaataaacaccgcactaagacggg 15391209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15791182 - 15791227
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaag 53  Q
    |||||||||||| ||||||| ||||||||||||| |||||| ||||    
T  15791182 ttcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 15791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17347818 - 17347761
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||| ||||||||||| ||||||| | ||||||||||| || ||| |||||||||    
T  17347818 gcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagacggg 17347761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28678038 - 28678087
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| || ||||||    
T  28678038 tcaaagctaatttttcaacctgaatcaaataaacaccgcactaggacggg 28678087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29726509 - 29726554
Alignment:
Q  13 agctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||| ||||||| |||||||| |||| ||||||||||||||||    
T  29726509 agctaatctttcaacctgaatcaattaaacaccgcattaagacggg 29726554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 33486938 - 33486987
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  33486938 tcaaagttaatttttcaacctgaatcaaataaacaccgcactaagacggg 33486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 44517360 - 44517311
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  44517360 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 44517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 3233001 - 3232953
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| | |||| ||||||||    
T  3233001 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgg 3232953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 32784292 - 32784244
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||| | ||||||||||||| |||||| ||||||||    
T  32784292 tcaaagctaatctttcagcctgaatcaaataaacaccgcactaagacgg 32784244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 32878921 - 32878873
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||| | ||||||||    
T  32878921 tcaaagctaatctttcaacctgaatcaaataaacaccgtactaagacgg 32878873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 37593332 - 37593283
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  37593332 tcaaagctaatatttcaacctgaatcaaataaacaccgcattaagacggg 37593283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 10094654 - 10094605
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  10094654 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 10094605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15017276 - 15017321
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccg 46  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  15017276 gcacttactcaaagctaatatttcaacctgaatcaaataaacaccg 15017321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 24988388 - 24988437
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  24988388 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 24988437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 38277057 - 38277008
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  38277057 tcaaagctaatatttcaacatgaatcaaataaacattgcactaagacggg 38277008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 9719881 - 9719929
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  9719881 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 9719929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 24320131 - 24320179
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  24320131 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 24320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 42644885 - 42644837
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  42644885 tcaaagctaatatttcaacctgaattaaataaacaccgcactaagacgg 42644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 11833231 - 11833184
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  11833231 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 11833184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 27050371 - 27050418
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| |||| |||||||||||||||| |||||| |||||||    
T  27050371 tcaaagctaatctttcgacatgaatcaaataaacaccgcactaagacg 27050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 31703428 - 31703373
Alignment:
Q  2 cacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    |||||||||||||||||| ||||||  ||||||||||||||||  || ||||||||    
T  31703428 cacttattcaaagctaatctttcaatctgaatcaaataaatactacactaagacgg 31703373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40761809 - 40761762
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgca 48  Q
    |||||| |||||||||||||||||||| | ||||||||||| ||||||    
T  40761809 gcacttgttcaaagctaatatttcaaccttaatcaaataaacaccgca 40761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 48304301 - 48304348
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  48304301 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 48304348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 1281045 - 1281094
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  1281045 tcaaaggtaatctttcaacctgaatcaaataaacaccgcactaagacggg 1281094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 9785530 - 9785485
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaaga 54  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  9785530 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 9785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 21603673 - 21603624
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  21603673 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 21603624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 21990875 - 21990826
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||  ||||||||||||| |||||| |||||||||    
T  21990875 tcaaagctaatctttcaagctgaatcaaataaacaccgcactaagacggg 21990826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 36579249 - 36579298
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||  ||||||||||||| |||||| |||||||||    
T  36579249 tcaaagctaatctttcaatctgaatcaaataaacaccgcactaagacggg 36579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 39532883 - 39532932
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||| ||||    
T  39532883 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaaggcggg 39532932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 45482277 - 45482228
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  45482277 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 45482228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 46025937 - 46025986
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| | ||||||||||| |||||| |||||||||    
T  46025937 tcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacggg 46025986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 10574594 - 10574546
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||| ||||| ||||||||||||||||||||| |||| | ||||||||    
T  10574594 tcaaaactaatctttcaacatgaatcaaataaacaccgaactaagacgg 10574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 28664849 - 28664897
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| || ||| ||||||||    
T  28664849 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacgg 28664897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 29352438 - 29352390
Alignment:
Q  10 caaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  29352438 caaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 29352390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 41288169 - 41288121
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||| | ||||||||    
T  41288169 tcaaagctaatctttcaacctgaatcaaataaacaccgtactaagacgg 41288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43256450 - 43256506
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||| | |||| |||||||||||| ||||||||||||| ||| || ||||||||    
T  43256450 gcacttaattaaagttaatatttcaacttgaatcaaataaacacctcactaagacgg 43256506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24210461 - 24210408
Alignment:
Q  2 cacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  24210461 cacttgttcaaagctaatctttcaacctgaatcaaataaataccgcactaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 30026798 - 30026847
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  30026798 tcaaagctaatctttcaacatgaatcaaataaacaccgcactaagacggg 30026847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 2234386 - 2234434
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  2234386 tcaaagctaatatttcaacctgaatcaaataaacaccgcactaagacgg 2234434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 19720222 - 19720175
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  19720222 tcaaagctaatctttcaacctgaatcaaataattaccgcattaagacg 19720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7579771 - 7579820
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  7579771 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 7579820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 10338738 - 10338787
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  10338738 tcaaagctaatttttcaacttgaatcaaataaacaccgcactaagacggg 10338787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 12329840 - 12329791
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| | ||||||||||| ||||||||||||||||    
T  12329840 tcaaagctaatttttcaacctaaatcaaataaacaccgcattaagacggg 12329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 37612866 - 37612817
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  37612866 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaagacggg 37612817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 22787705 - 22787657
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  22787705 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 22787657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 39067605 - 39067653
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| |||||||||||||| |||||| |||||| ||||||||    
T  39067605 tcaaagctaatctttcaacatgaatctaataaacaccgcactaagacgg 39067653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10334389 - 10334342
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||||||||||  ||||||||||||| |||||| |||||||    
T  10334389 tcaaagctaatatttcaatctgaatcaaataaacaccgcactaagacg 10334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 14600614 - 14600661
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  14600614 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 14600661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 42261146 - 42261099
Alignment:
Q  10 caaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    |||||||||||||||||| | ||||||||||||||| || ||||||||    
T  42261146 caaagctaatatttcaacctcaatcaaataaataccacactaagacgg 42261099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31407664 - 31407710
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  31407664 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 31407710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 4757378 - 4757329
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  4757378 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 4757329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 9501799 - 9501750
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| ||||||  ||||||||    
T  9501799 tcaaagctaatctttcaacctgaatcaaataaacaccgcacaaagacggg 9501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 32778873 - 32778918
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaaga 54  Q
    |||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  32778873 tcaaagttaatctttcaacctgaatcaaataaacaccgcattaaga 32778918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 41361945 - 41361896
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||| |||||    
T  41361945 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaaaacggg 41361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 43937093 - 43937142
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  43937093 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 43937142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 2025140 - 2025188
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||  ||||||||||||| |||||| ||||||||    
T  2025140 tcaaagctaatctttcaatctgaatcaaataaacaccgcactaagacgg 2025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 2968733 - 2968697
Alignment:
Q  21 tttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  2968733 tttcaacctgaatcaaataaataccgcactaagacgg 2968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 10633097 - 10633145
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||| ||||||| |||||| ||||||||    
T  10633097 tcaaagctaatctttcaacctgaataaaataaacaccgcactaagacgg 10633145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 37128403 - 37128451
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||| ||||| ||||||| ||||||||||||| |||||| ||||||||    
T  37128403 tcaaaactaatctttcaacctgaatcaaataaacaccgcactaagacgg 37128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 15590016 - 15590065
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  15590016 tcaaagctaatctttcaacctgaatcaaataaacaccgcattaagacggg 15590065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31937320 - 31937377
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  31937320 gcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 31937377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31705386 - 31705331
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    |||||| |||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  31705386 gcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 31705331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 23654464 - 23654414
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  23654464 ttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 23654414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 19402718 - 19402767
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  19402718 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 19402767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 23638028 - 23638077
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  23638028 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 23638077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 35219821 - 35219870
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  35219821 tcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacggg 35219870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1915086 - 1915143
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||| ||||||||||||| |||| | |||||||||    
T  1915086 gcacttgttcatagctaatctttcaacctgaatcaaataaacaccgtactaagacggg 1915143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 2304746 - 2304795
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| || ||| |||||||||    
T  2304746 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacggg 2304795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 4921789 - 4921838
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| || |||||||||| |||||| |||||||||    
T  4921789 tcaaagctaatctttcaacctggatcaaataaacaccgcagtaagacggg 4921838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 23101316 - 23101365
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||||||||||  ||||||||    
T  23101316 tcaaagttaatctttcaacctgaatcaaataaataccgcacaaagacggg 23101365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 29284964 - 29284919
Alignment:
Q  11 aaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  29284964 aaagctaatctttcaacttgaatcaaataaacaccgcactaagacg 29284919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 8693562 - 8693610
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| || ||| ||||||||    
T  8693562 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacgg 8693610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 12342977 - 12342941
Alignment:
Q  5 ttattcaaagctaatatttcaacatgaatcaaataaa 41  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  12342977 ttatttaaagttaatatttcaacatgaatcaaataaa 12342941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 7060536 - 7060487
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  7060536 tcaaagctaatctttcaacctgaatcaaataaacaccgcattaagacggg 7060487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 22121659 - 22121612
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  22121659 tcaaagctaatatttcaacttgaatcaaataaacaccacattaagacg 22121612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 477920 - 477969
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  477920 tcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacggg 477969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 32616767 - 32616816
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  32616767 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaagacggg 32616816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 36124256 - 36124305
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  36124256 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 36124305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 39837808 - 39837759
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  39837808 tcaaagcaaatatttcaacctgaatcaaataaacaccgcactaagacggg 39837759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 56236730 - 56236779
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| |||||||||||||||||| |||||||||||    
T  56236730 tcaaagttaatctttcaacttgaatcaaataaataccgtattaagacggg 56236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6882165 - 6882121
Alignment:
Q  13 agctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||    
T  6882165 agctaatctttcaacctgaatcaaataaacaccgcattaagacgg 6882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12717017 - 12717073
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||| |||||||||||  |||||| ||||||||||||| |||||| ||||||||    
T  12717017 gcacttaatcaaagctaatccttcaacctgaatcaaataaacaccgcactaagacgg 12717073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 13586148 - 13586196
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  13586148 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 13586196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 24825862 - 24825814
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  24825862 tcaaagctaatctttcaacctgaatcaaataaagaccgcactaagacgg 24825814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 37431390 - 37431358
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaa 41  Q
    |||||||||||||||||||||||||||||||||    
T  37431390 tcaaagctaatatttcaacatgaatcaaataaa 37431358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 27395041 - 27394994
Alignment:
Q  11 aaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  27395041 aaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 27394994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 22757307 - 22757261
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  22757307 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 22757261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 394182 - 394231
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  394182 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 394231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 2448013 - 2447964
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||||| ||||||||||| |||||| |||||||||    
T  2448013 tcaaagttaatctttcaacataaatcaaataaacaccgcactaagacggg 2447964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 8712743 - 8712694
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  8712743 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 8712694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11210221 - 11210270
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  11210221 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 11210270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 12754376 - 12754327
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| ||| ||||||||||||    
T  12754376 tcaaagttaatgtttcaacttgaatcaaataaacaccacattaagacggg 12754327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13965773 - 13965724
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| | ||||||||||| |||||| |||||||||    
T  13965773 tcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacggg 13965724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 20399811 - 20399860
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||  ||||||||||||| |||||| |||||||||    
T  20399811 tcaaagctaatctttcaaactgaatcaaataaacaccgcactaagacggg 20399860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 26742371 - 26742420
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||  ||||||||||||| |||||| |||||||||    
T  26742371 tcaaagctaatctttcaatctgaatcaaataaacaccgcactaagacggg 26742420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38944056 - 38944105
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||| | ||||||| ||||||||||||| |||||| |||||||||    
T  38944056 tcaaagctattctttcaacctgaatcaaataaacaccgcactaagacggg 38944105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 42197766 - 42197717
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  42197766 tcaaagataatctttcaacctgaatcaaataaacaccgcactaagacggg 42197717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 43244289 - 43244338
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||| ||||||| |||||| |||||||||    
T  43244289 tcaaagctaatctttcaacttgaatgaaataaacaccgcactaagacggg 43244338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 24568621 - 24568669
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| ||| || ||||||||    
T  24568621 tcaaagctaatctttcaacctgaatcaaataaacaccccactaagacgg 24568669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 25658380 - 25658332
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||||| ||||||||||| | |||| ||||||||    
T  25658380 tcaaagctaatctttcaacataaatcaaataaacatcgcactaagacgg 25658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 53647845 - 53647797
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    |||||| |||| ||||||| ||||||||||||| |||||| ||||||||    
T  53647845 tcaaagttaatttttcaacctgaatcaaataaacaccgcactaagacgg 53647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 29098003 - 29097953
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  29098003 ttcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacggg 29097953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33164375 - 33164425
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  33164375 ttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 33164425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 980937 - 980986
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  980937 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 980986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 2555258 - 2555306
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||||||    
T  2555258 tcaaagctaatatttcaacctgaatcaaataaacaccacactaagacgg 2555306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 6635461 - 6635413
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  6635461 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaagacgg 6635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 26294965 - 26295013
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  26294965 tcaaaactaatatttcaacctgaatcaaataaacaccgcactaagacgg 26295013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17331542 - 17331492
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| ||||| ||||||| ||||||||||||| |||||| |||||||||    
T  17331542 ttcaaaactaatctttcaacctgaatcaaataaacaccgcactaagacggg 17331492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 6281257 - 6281208
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  6281257 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 6281208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11858123 - 11858074
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  11858123 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacggg 11858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 17096149 - 17096198
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||| | |||||||||    
T  17096149 tcaaagctaatctttcaacctgaatcaaataaacaccgtactaagacggg 17096198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 17732294 - 17732339
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaaga 54  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  17732294 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaaga 17732339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 42396420 - 42396469
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||||||| | ||||||||||||||| | |||| |||||||||    
T  42396420 tcaaagctaatatttgagcatgaatcaaataaacatcgcactaagacggg 42396469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 42609357 - 42609325
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaa 41  Q
    ||||||||||| |||||||||||||||||||||    
T  42609357 tcaaagctaatctttcaacatgaatcaaataaa 42609325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 11819297 - 11819247
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  11819297 ttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 11819247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 35174921 - 35174872
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  35174921 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 35174872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 22485178 - 22485130
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  22485178 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 22485130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 48855090 - 48855042
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||||||||||||||||| ||| || ||||||||    
T  48855090 tcaaagctaatctttcaacatgaatcaaataaacaccacactaagacgg 48855042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 55455078 - 55455030
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  55455078 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 55455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 3312657 - 3312618
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgca 48  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  3312657 tcaaagctaatatttcaacctgaatcaaataaacaccgca 3312618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 36624613 - 36624660
Alignment:
Q  11 aaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  36624613 aaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 36624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 47733793 - 47733840
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  47733793 tcaaaactaatatttcaacctgaatcaaataaacaccgcactaagacg 47733840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 49628013 - 49628060
Alignment:
Q  11 aaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  49628013 aaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 49628060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33637617 - 33637567
Alignment:
Q  8 ttcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||| ||||||| | ||||||||||| |||||| |||||||||    
T  33637617 ttcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacggg 33637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 3457152 - 3457103
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||| | |||||||||    
T  3457152 tcaaagctaatctttcaacttgaatcaaataaacaccgtactaagacggg 3457103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 13701917 - 13701966
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| || ||||||    
T  13701917 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaggacggg 13701966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 14585675 - 14585626
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||| || ||||||| ||||||||||||| |||||| |||||||||    
T  14585675 tcaaagctgatctttcaacctgaatcaaataaacaccgcactaagacggg 14585626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 30156197 - 30156246
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| |||||||  |||||||||||| |||||| |||||||||    
T  30156197 tcaaagctaatttttcaaccagaatcaaataaacaccgcactaagacggg 30156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 31270539 - 31270490
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| |||||| |||||| |||||| |||||||||    
T  31270539 tcaaagctaatctttcaacctgaatcgaataaacaccgcactaagacggg 31270490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 40013188 - 40013233
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaaga 54  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  40013188 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 53402834 - 53402785
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  53402834 tcaaagctaatctttcaacctgaatcaaataaacagcgcactaagacggg 53402785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 53962331 - 53962282
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||| ||| ||||||||||||| |||||| |||||||||    
T  53962331 tcaaagctaatcttttaacctgaatcaaataaacaccgcactaagacggg 53962282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 54706631 - 54706680
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  54706631 tcaaaggtaatctttcaacctgaatcaaataaacaccgcactaagacggg 54706680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 53155346 - 53155394
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| || ||| ||||||||    
T  53155346 tcaaagctaatctttcaacctgaatcaaataaacactgcactaagacgg 53155394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 13548809 - 13548855
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  13548809 tcaaagctaatctttcaacctgaatcaaataaaaaccgcattaagac 13548855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43696089 - 43696035
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagac 55  Q
    |||||| |||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  43696089 gcacttgttcaaagctaatttttcaacctgaatcaaataaacaccgcactaagac 43696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 4426566 - 4426615
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  4426566 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 4426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 9978577 - 9978626
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  9978577 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 9978626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 10286915 - 10286964
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  10286915 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 10286964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 22597348 - 22597299
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  22597348 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 22597299  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 32314655 - 32314606
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  32314655 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 32314606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 34471179 - 34471130
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| |||||||||||||||||||||||||||| ||| |||||    
T  34471179 tcaaagttaatctttcaacatgaatcaaataaataccgcactaaaacggg 34471130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 43474036 - 43474085
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  43474036 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 43474085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6510703 - 6510663
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaa 41  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  6510703 gcacttattcaaagctaatttttcaacttgaatcaaataaa 6510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 15920086 - 15920039
Alignment:
Q  10 caaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  15920086 caaagctaatatttcaacctgaatcaaataaaca-cgcattaagacggg 15920039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 18089305 - 18089353
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  18089305 tcaaagctaatctttcaacttgaatcaaataaacaccgcactaagacgg 18089353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 35333718 - 35333670
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  35333718 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgg 35333670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 5754501 - 5754454
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||    
T  5754501 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 5754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 4732283 - 4732234
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||| |||| ||||||| ||||||||||||| |||||| |||||||||    
T  4732283 tcaaagataatctttcaacttgaatcaaataaacaccgcactaagacggg 4732234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11798431 - 11798480
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| | |||| |||||||||    
T  11798431 tcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacggg 11798480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 12704900 - 12704851
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| | ||||||||||| |||||| |||||||||    
T  12704900 tcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacggg 12704851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 13740562 - 13740615
Alignment:
Q  3 acttattcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    |||| |||||||||||| ||||||| ||||||||||||| | |||| |||||||    
T  13740562 acttgttcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacg 13740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 20561040 - 20561085
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaaga 54  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  20561040 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28231005 - 28231054
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    |||||||| || ||||||| ||||||||||||| |||||| |||||||||    
T  28231005 tcaaagctgatctttcaacctgaatcaaataaacaccgcactaagacggg 28231054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28261796 - 28261845
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||| ||||| ||||||| ||||||||||||| |||||| |||||||||    
T  28261796 tcaaaactaatctttcaacctgaatcaaataaacaccgcactaagacggg 28261845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 33012261 - 33012212
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||| ||||||| |||||| |||||||||    
T  33012261 tcaaagctaatctttcaacctgaattaaataaacaccgcactaagacggg 33012212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 34962984 - 34963033
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||| ||||| ||||||| ||||||||||||| |||||| |||||||||    
T  34962984 tcaaatctaatctttcaacctgaatcaaataaacaccgcactaagacggg 34963033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38535213 - 38535262
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| || ||||||    
T  38535213 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaggacggg 38535262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 823866 - 823914
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||  ||||||||||||| |||||| ||||||||    
T  823866 tcaaagctaatttttcaatctgaatcaaataaacaccgcactaagacgg 823914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 38384365 - 38384413
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||| ||||| ||||||| |||||| ||||||||    
T  38384365 tcaaagctaatctttcaacctgaataaaataaacaccgcactaagacgg 38384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 44942499 - 44942451
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacgg 57  Q
    ||||||||||| ||||||  ||||||||||||| |||||| ||||||||    
T  44942499 tcaaagctaatctttcaagctgaatcaaataaacaccgcactaagacgg 44942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 1787 - 1738
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  1787 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggg 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 3975 - 4024
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||||||||||| ||||| ||||||| |||||| |||||||||    
T  3975 tcaaagctaatatttcaacctgaattaaataaacaccgcactaagacggg 4024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35297 - 35250
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacg 56  Q
    ||||||||||||||||||| | ||||||||||| |||||| |||||||    
T  35297 tcaaagctaatatttcaacctaaatcaaataaacaccgcactaagacg 35250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 201952 - 201991
Alignment:
Q  2 cacttattcaaagctaatatttcaacatgaatcaaataaa 41  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  201952 cacttgttcaaagctaatatttcaacctgaatcaaataaa 201991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3121 - 3076
Alignment:
Q  1 gcacttattcaaagctaatatttcaacatgaatcaaataaataccg 46  Q
    |||||| |||||||||||| ||||||| ||||||||||||| ||||    
T  3121 gcacttgttcaaagctaatctttcaacctgaatcaaataaacaccg 3076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 13153 - 13202
Alignment:
Q  9 tcaaagctaatatttcaacatgaatcaaataaataccgcattaagacggg 58  Q
    ||||||||||| ||||||| ||||||||||||| ||| || |||||||||    
T  13153 tcaaagctaatctttcaacctgaatcaaataaacacctcactaagacggg 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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