View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11961_high_18 (Length: 224)
Name: NF11961_high_18
Description: NF11961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11961_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 35732793 - 35732990
Alignment:
| Q |
1 |
aaccattggctggtataaaatcaatatattattgcaaaatataaaataagggaaggattatataccatgaacaagaatcatcctcgagaaagaatgtcaa |
100 |
Q |
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| T |
35732793 |
aaccattggctggtataaaatcaatatattattgcaaaatataaaataagggaaggattatataccatgaacaacaatcatcctcgagaaagaatgtcaa |
35732892 |
T |
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| Q |
101 |
aatagcaaccatctgccatagcccatatgataatcaatggttaataaacatggaataccgttgaaatttaatatatatattcaaaaattaataagtagca |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35732893 |
aatagcaaccatctg-------ccatatgataatcaatggttaataaacatggaataccgttgaaatttaatatatatattcaaaaattaataagtagca |
35732985 |
T |
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