View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11967_high_34 (Length: 335)
Name: NF11967_high_34
Description: NF11967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11967_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 37750121 - 37750281
Alignment:
| Q |
22 |
cctctctcaacctcactccataagagaaattttacccattgtattttgtacaaacatattgacagaaattttctcaagttcattatctgctacaagaaaa |
121 |
Q |
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| T |
37750121 |
cctctcttcacctcactccataagagaaattttaaccattgtatttttaacaaacatattgacagaaattttctcaagttcattatctgtcacaagaaaa |
37750220 |
T |
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| Q |
122 |
gttttaaggaacaccaagagtgaagagattccacttgtaacagttttacttcatgctcatt |
182 |
Q |
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| T |
37750221 |
gttttaagcaacaccaagattgaagagattccacttgtaacagttttacttcacgctcatt |
37750281 |
T |
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