View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11967_low_13 (Length: 477)
Name: NF11967_low_13
Description: NF11967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11967_low_13 |
 |  |
|
| [»] scaffold0735 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 31315680 - 31315356
Alignment:
| Q |
20 |
ttattaaacaaaaattgtcaaaaggatatggtttgtctccatcaaagggaaaattgtgaagaagattttcttcttagacttggttgggttttgatgataa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
31315680 |
ttattaaacaaaaattgtcaaaaggatatggtttttctccatcaaagggaaaattgtgaagaagatttccttcttggacttggttaggttttgatgataa |
31315581 |
T |
 |
| Q |
120 |
caaagattcatcataaaagaagaaatatatgtaggcacaagatgaagacactagaattgtatagttaaataattttaagtat--tctttatatttgattt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
31315580 |
caaagattcatcataaaagaagaaatatatgtagacacaagatgaagacacttgaattgtgtagttaaataatttgaagtatggtctttatatttgattt |
31315481 |
T |
 |
| Q |
218 |
atcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataagattatatgtgaaacaa |
317 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
31315480 |
atcattttcaatatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataagattatatgtgaagcaa |
31315381 |
T |
 |
| Q |
318 |
gctcttaaattgatgacaaactaat |
342 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
31315380 |
gctcttaaattgatgacaaactaat |
31315356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 81 - 331
Target Start/End: Complemental strand, 31316509 - 31316260
Alignment:
| Q |
81 |
aagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaatatatgtaggcacaagatgaagacactagaattgta |
180 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||| | |||||| |
|
|
| T |
31316509 |
aagattttcttcttagacttggttgaattttgatgataacaaatgctcatcacaaaagaagaaaaatatgtaggcacaagatgaagaaacttggattgta |
31316410 |
T |
 |
| Q |
181 |
tagttaaataattttaagtat--tctttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaa |
278 |
Q |
| |
|
||||||||||||| ||||||| ||||| | ||||||||| |||||||||||| ||||||| ||||| ||| |||||| || ||||| ||||| |
|
|
| T |
31316409 |
tagttaaataattgtaagtatggtctttttctttgatttaccattttcaacatccatataact-ataat--aaaaaaaatcattgaaatataataacaaa |
31316313 |
T |
 |
| Q |
279 |
tcattttcttagttaaatataagattatatgtgaaacaagctcttaaattgat |
331 |
Q |
| |
|
||||||| | |||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
31316312 |
tcattttatgagttaaatataagagtctatgtgaaataagctcttaaattgat |
31316260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 31315342 - 31315265
Alignment:
| Q |
382 |
cgattacatgttcgatttttgaaaacatttttgaatgttacaacatgtaatcagttaccaaaacgaagtaacccaata |
459 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31315342 |
cgattacatgttctatttttgaaaacatttttgaatgttacaacatgtaatcaattaccaaaacgaagtaacccaata |
31315265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 42879660 - 42879754
Alignment:
| Q |
73 |
ttgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
42879660 |
ttgtgaagaagattcccttcttagatttggttgggttttgacgataacaaactcacatcacaaaagaagaaaaccatgaaggcacaagatgaaga |
42879754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 17865826 - 17865918
Alignment:
| Q |
33 |
attgtcaaaaggatatggtttgtctccatcaaa--gggaaaattgtgaagaagattttcttcttagacttggttgggttttgatgataacaaa |
123 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
17865826 |
attgtcaaaaggatatggtttgtcatcatcaaaagggggatattgtgaagaagatttccttcttagacttggtttggttttgatgataacaaa |
17865918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 22791221 - 22791338
Alignment:
| Q |
187 |
aataattttaagtat--tctttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattt |
284 |
Q |
| |
|
||||||| ||||||| ||||||| ||||||||||| ||||||||| | ||||||| | |||||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
22791221 |
aataattgtaagtatgatctttatctttgatttatcgctttcaacatctatataacttagaatgctcaaaaattcatttgaacttaatcacaaatcattt |
22791320 |
T |
 |
| Q |
285 |
tcttagttaaatataaga |
302 |
Q |
| |
|
| | | |||||||||||| |
|
|
| T |
22791321 |
tttaaattaaatataaga |
22791338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 29411051 - 29410984
Alignment:
| Q |
235 |
tataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataaga |
302 |
Q |
| |
|
||||||| | |||||| |||||||||| |||| |||||||||||||||| || ||| |||||||||| |
|
|
| T |
29411051 |
tataacttagaatgctcagaaattcatttgaacttaatcacaaatcatttgctaagtcaaatataaga |
29410984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 32983469 - 32983539
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
|||||||||||||| ||||||||||||| || |||||||||||||||| | ||| | ||||||||||| |
|
|
| T |
32983469 |
tgtgaagaagatttccttcttagacttgactgaattttgatgataacaaacttacataacaaaagaagaaa |
32983539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 29411229 - 29411180
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaa |
123 |
Q |
| |
|
|||||||||||||| |||||| |||||| | |||||||||||||||||| |
|
|
| T |
29411229 |
tgtgaagaagatttctttcttaaacttggctaggttttgatgataacaaa |
29411180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 21571155 - 21571061
Alignment:
| Q |
204 |
tttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatat |
298 |
Q |
| |
|
||||| ||||||||| || ||||||||||| ||||||| | |||||| |||||||||| |||| ||||||||||||||||||| |||||||||| |
|
|
| T |
21571155 |
tttatctttgatttaccactttcaacatttatataacttagaatgctcagaaattcatttgaacttaatcacaaatcattttctaagttaaatat |
21571061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 13826846 - 13826933
Alignment:
| Q |
28 |
caaaaattgtcaaaaggatatggtttgtctccatcaaa--gggaaa-attgtgaagaagattttcttcttagacttggttgggttttg |
112 |
Q |
| |
|
|||| ||||||||||||||| ||||||| ||||||| |||| | |||||||||||||||| |||||||||||| | ||||||||| |
|
|
| T |
13826846 |
caaacattgtcaaaaggataaagtttgtcatcatcaaaaagggagagattgtgaagaagatttccttcttagacttagctgggttttg |
13826933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 17460847 - 17460748
Alignment:
| Q |
202 |
tctttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataag |
301 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| | ||||||| | |||||| |||||||||| |||| |||||| || ||||||||| ||||||||||||| |
|
|
| T |
17460847 |
tctttatatt-gatttatcactttcaacatctatataacttagaatgctcagaaattcatttgaacttaatcataattcattttctaagttaaatataag |
17460749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 34234459 - 34234549
Alignment:
| Q |
77 |
gaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
||||||||||| ||||||||||||| || ||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||| |
|
|
| T |
34234459 |
gaagaagatttctttcttagacttggctgagttttgatgataacaaactcacatcacaaaagaagaaaactatggaggcacaagatgaaga |
34234549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 18924586 - 18924658
Alignment:
| Q |
72 |
attgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
18924586 |
attgtgaagaagattttcttcttagacttgactgaattttgatgataacaaactcacatcacaaaagaagaaa |
18924658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 25942211 - 25942262
Alignment:
| Q |
71 |
aattgtgaagaagattttcttcttagacttggttgggttttgatgataacaa |
122 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||||| |||||||| |
|
|
| T |
25942211 |
aattgtgaagaagatttccttcttagacttggctaggttttgacgataacaa |
25942262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 32671352 - 32671452
Alignment:
| Q |
202 |
tctttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataag |
301 |
Q |
| |
|
||||||| |||||||||| | ||||||||| | ||||||| | |||||| |||||||||| |||| | ||||||||||||||||| ||| ||||||||| |
|
|
| T |
32671352 |
tctttatctttgatttattactttcaacatctatataacttagaatgctcagaaattcatttgaactttatcacaaatcattttctaagtaaaatataag |
32671451 |
T |
 |
| Q |
302 |
a |
302 |
Q |
| |
|
| |
|
|
| T |
32671452 |
a |
32671452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 11422523 - 11422474
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaa |
123 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||| |||||||| |
|
|
| T |
11422523 |
tgtgaagaagatttgcttcctagacttggttgggttttgataataacaaa |
11422474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 29895976 - 29896048
Alignment:
| Q |
72 |
attgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
|||||||||||||||| ||||||| | |||| ||||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
29895976 |
attgtgaagaagatttccttcttaaatttggctgggtttcgatgataacaaactcacatcacaaaagaagaaa |
29896048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 32671230 - 32671308
Alignment:
| Q |
89 |
cttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| ||||||| | | |||| |||||||||||||||| |
|
|
| T |
32671230 |
cttcttagacttgactgggttttgatgataacaaattcacatcacaaaagaaaataattatggaggcacaagatgaaga |
32671308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0735 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0735
Description:
Target: scaffold0735; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 3380 - 3286
Alignment:
| Q |
73 |
ttgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
3380 |
ttgtgaagaagattcccttcttagatttggttgggttttgacgataacaaactcacatcacaaaagaagaaaaccatgaaggcacaagatgaaga |
3286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 32134884 - 32134978
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaag-aaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
||||||||| |||||||||||| || |||||| ||||||||||||||||| |||||||||||||| |||| |||| |||||| ||||||||| |
|
|
| T |
32134884 |
tgtgaagaatattttcttcttaaacatggttgagttttgatgataacaaactcacatcataaaagaagaaaatctatggaggcacgagatgaaga |
32134978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 25115452 - 25115407
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataa |
119 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
25115452 |
tgtgaagaatatttccttcttagacttggttgagttttgatgataa |
25115407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 26026037 - 26025964
Alignment:
| Q |
253 |
gaaattcattggaacataatcacaaatcattttcttagttaaatataagattatatgtgaaacaagctcttaaa |
326 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| | | |||||||||| | | |||| ||||||| || ||||| |
|
|
| T |
26026037 |
gaaattcatttgaacttaatcacaaatcattttttaaattaaatataaaagtctatgagaaacaaacttttaaa |
26025964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 25424434 - 25424364
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
25424434 |
tgtgaagaagattttcttcttagacttggctgagttttgatgataacaaactcacatcacaaaagaagaaa |
25424364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 27155862 - 27155955
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaag-aaatatatgtaggcacaagatgaaga |
167 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||| |||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
27155862 |
tgtgaagaagatttccttcttagacttggctgggttttgatgataa-aaactcacatcacaaaagaagaaaacatatggaggcacaagatgaaga |
27155955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 21546957 - 21546909
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaa |
122 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
21546957 |
tgtgaagaagatttccttcttagatttggttgaattttgatgataacaa |
21546909 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 2874263 - 2874191
Alignment:
| Q |
72 |
attgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
2874263 |
attgtgaagaagattttcttcttagacttggatgagtttcgatgataacaaactcacatcacaaaagaagaaa |
2874191 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 14309261 - 14309216
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataa |
119 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
14309261 |
tgtgaagaagatttccttcttagacttggctgggttttgatgataa |
14309216 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 34057039 - 34056969
Alignment:
| Q |
74 |
tgtgaagaagattttcttcttagacttggttgggttttgatgataacaaagattcatcataaaagaagaaa |
144 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
34057039 |
tgtgaagaagttttccttcttagatttggttgagttttgatgataataaactcacatcataaaagaagaaa |
34056969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 2874123 - 2874008
Alignment:
| Q |
202 |
tctttatatttgatttatcattttcaacatttttataactcataatgcttggaaattcattggaacataatcacaaatcattttcttagttaaatataag |
301 |
Q |
| |
|
||||||| |||| |||||| |||||| | || ||||||| | |||||| | ||||||| |||| | |||||||||| |||||| ||||||||||||| |
|
|
| T |
2874123 |
tctttatctttgctttatcgctttcaatagttatataacttagaatgctaaaacattcatttgaactttatcacaaatctttttctaagttaaatataag |
2874024 |
T |
 |
| Q |
302 |
attatatgtgaaacaa |
317 |
Q |
| |
|
| | |||| ||||||| |
|
|
| T |
2874023 |
agtctatgagaaacaa |
2874008 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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