View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11967_low_7 (Length: 540)

Name: NF11967_low_7
Description: NF11967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11967_low_7
NF11967_low_7
[»] chr6 (45 HSPs)
chr6 (17-500)||(14771721-14772203)
chr6 (49-251)||(20850231-20850433)
chr6 (20-251)||(21311881-21312112)
chr6 (17-249)||(3652398-3652630)
chr6 (18-251)||(2681219-2681452)
chr6 (49-250)||(23986351-23986552)
chr6 (17-251)||(6330914-6331148)
chr6 (19-251)||(20896692-20896924)
chr6 (49-219)||(27334103-27334273)
chr6 (49-219)||(27394843-27395013)
chr6 (59-252)||(2720608-2720801)
chr6 (17-251)||(2890841-2891073)
chr6 (17-251)||(11062196-11062429)
chr6 (18-249)||(17851286-17851517)
chr6 (17-161)||(17027533-17027677)
chr6 (17-162)||(7911877-7912022)
chr6 (18-251)||(20126185-20126418)
chr6 (17-253)||(17850826-17851062)
chr6 (89-251)||(3652889-3653051)
chr6 (18-250)||(23776352-23776584)
chr6 (20-162)||(7912309-7912451)
chr6 (17-254)||(33775004-33775243)
chr6 (49-163)||(9440343-9440457)
chr6 (17-162)||(13492788-13492933)
chr6 (49-252)||(21311423-21311627)
chr6 (17-251)||(15929492-15929726)
chr6 (49-161)||(13191547-13191659)
chr6 (58-162)||(17731156-17731260)
chr6 (17-162)||(16519967-16520112)
chr6 (51-183)||(31821728-31821860)
chr6 (49-249)||(15929111-15929311)
chr6 (20-236)||(20735621-20735836)
chr6 (72-162)||(9440485-9440575)
chr6 (40-130)||(9440882-9440972)
chr6 (41-130)||(32292916-32293005)
chr6 (17-161)||(9352062-9352206)
chr6 (17-97)||(13492396-13492476)
chr6 (51-107)||(28065874-28065930)
chr6 (17-163)||(12194328-12194472)
chr6 (20-165)||(17205335-17205479)
chr6 (53-130)||(28582995-28583071)
chr6 (17-112)||(1991602-1991697)
chr6 (49-112)||(20732627-20732690)
chr6 (76-112)||(9441099-9441135)
chr6 (51-114)||(3885123-3885186)
[»] chr8 (43 HSPs)
chr8 (17-251)||(10844793-10845027)
chr8 (17-251)||(22026289-22026523)
chr8 (17-251)||(27925809-27926043)
chr8 (17-251)||(32292307-32292541)
chr8 (17-252)||(8080344-8080579)
chr8 (49-251)||(22549029-22549231)
chr8 (17-252)||(12827256-12827491)
chr8 (49-252)||(41659139-41659341)
chr8 (17-251)||(6464912-6465146)
chr8 (49-251)||(22548583-22548785)
chr8 (17-251)||(28453249-28453482)
chr8 (18-251)||(33852261-33852493)
chr8 (51-253)||(27022374-27022576)
chr8 (49-251)||(28375088-28375290)
chr8 (17-251)||(22840531-22840765)
chr8 (49-243)||(27021913-27022111)
chr8 (18-162)||(34308482-34308626)
chr8 (17-163)||(10844617-10844763)
chr8 (17-183)||(2044036-2044202)
chr8 (17-162)||(25144771-25144916)
chr8 (17-162)||(34308937-34309086)
chr8 (17-141)||(12100711-12100835)
chr8 (21-137)||(41912994-41913110)
chr8 (19-153)||(17103089-17103223)
chr8 (17-162)||(21316111-21316256)
chr8 (51-152)||(22705181-22705282)
chr8 (20-161)||(25147536-25147677)
chr8 (17-151)||(25147977-25148111)
chr8 (17-112)||(3745150-3745245)
chr8 (49-112)||(27819280-27819343)
chr8 (22-135)||(3744664-3744777)
chr8 (51-224)||(6466648-6466820)
chr8 (21-112)||(15567562-15567653)
chr8 (58-128)||(1297040-1297110)
chr8 (49-167)||(30334942-30335060)
chr8 (49-112)||(15819049-15819112)
chr8 (17-162)||(30527484-30527626)
chr8 (51-110)||(15568041-15568100)
chr8 (17-83)||(31283653-31283719)
chr8 (50-114)||(17429547-17429611)
chr8 (64-142)||(29971450-29971528)
chr8 (20-89)||(6466329-6466397)
chr8 (54-111)||(36968434-36968491)
[»] chr5 (43 HSPs)
chr5 (20-251)||(34867700-34867931)
chr5 (49-253)||(34371520-34371724)
chr5 (17-251)||(2193726-2193960)
chr5 (49-251)||(34371978-34372180)
chr5 (17-251)||(10926948-10927183)
chr5 (17-252)||(20039477-20039711)
chr5 (20-251)||(21886151-21886382)
chr5 (17-251)||(39146849-39147083)
chr5 (17-239)||(10927405-10927628)
chr5 (17-251)||(27646837-27647072)
chr5 (49-253)||(42788680-42788883)
chr5 (49-258)||(17445489-17445698)
chr5 (49-251)||(18304341-18304543)
chr5 (18-253)||(5066894-5067128)
chr5 (18-251)||(15513015-15513249)
chr5 (17-162)||(189067-189212)
chr5 (17-162)||(8642036-8642181)
chr5 (49-162)||(22556535-22556648)
chr5 (18-130)||(1821937-1822049)
chr5 (17-162)||(3886603-3886748)
chr5 (17-162)||(2473958-2474103)
chr5 (49-162)||(3887091-3887204)
chr5 (49-162)||(22556968-22557081)
chr5 (17-162)||(2474404-2474549)
chr5 (17-252)||(1879990-1880220)
chr5 (17-240)||(4657995-4658217)
chr5 (20-130)||(18750201-18750311)
chr5 (81-162)||(22975076-22975157)
chr5 (20-163)||(8391327-8391469)
chr5 (40-114)||(16370733-16370807)
chr5 (49-163)||(30719839-30719953)
chr5 (17-135)||(29680109-29680220)
chr5 (49-111)||(24182279-24182341)
chr5 (49-161)||(30684590-30684702)
chr5 (17-135)||(4673473-4673591)
chr5 (49-195)||(11160715-11160861)
chr5 (55-107)||(2058696-2058748)
chr5 (49-112)||(42429194-42429257)
chr5 (20-107)||(20858546-20858633)
chr5 (51-84)||(39801498-39801531)
chr5 (44-96)||(43356649-43356701)
chr5 (51-97)||(32574694-32574740)
chr5 (17-81)||(11757283-11757347)
[»] chr4 (59 HSPs)
chr4 (17-251)||(12691995-12692229)
chr4 (17-251)||(1645745-1645979)
chr4 (17-251)||(23942785-23943016)
chr4 (23-251)||(4127891-4128120)
chr4 (17-251)||(4127433-4127668)
chr4 (20-251)||(50398537-50398768)
chr4 (17-249)||(24628973-24629208)
chr4 (49-251)||(24629461-24629662)
chr4 (18-251)||(3169116-3169349)
chr4 (25-251)||(9423862-9424088)
chr4 (17-252)||(50398989-50399224)
chr4 (17-253)||(29628664-29628899)
chr4 (17-251)||(14351705-14351939)
chr4 (17-251)||(21067648-21067875)
chr4 (49-211)||(21220359-21220521)
chr4 (17-251)||(53996111-53996345)
chr4 (49-223)||(21067220-21067394)
chr4 (17-249)||(51331277-51331509)
chr4 (23-252)||(31817854-31818083)
chr4 (49-162)||(14572178-14572291)
chr4 (17-247)||(23943238-23943464)
chr4 (17-161)||(49998636-49998780)
chr4 (49-251)||(8467828-8468029)
chr4 (17-150)||(14571717-14571850)
chr4 (49-162)||(23350311-23350424)
chr4 (17-162)||(35871627-35871771)
chr4 (17-162)||(44471321-44471466)
chr4 (18-251)||(1464057-1464290)
chr4 (17-112)||(7678618-7678713)
chr4 (49-141)||(17628531-17628623)
chr4 (18-110)||(43928961-43929052)
chr4 (17-251)||(27029188-27029421)
chr4 (49-111)||(44470902-44470964)
chr4 (72-222)||(53854858-53855008)
chr4 (51-251)||(27026414-27026613)
chr4 (49-240)||(31817426-31817617)
chr4 (51-132)||(13266115-13266196)
chr4 (17-95)||(50814821-50814899)
chr4 (17-162)||(17029329-17029474)
chr4 (49-161)||(41869918-41870030)
chr4 (17-153)||(52048663-52048798)
chr4 (51-162)||(17028873-17028984)
chr4 (49-163)||(13613925-13614039)
chr4 (51-97)||(20306191-20306237)
chr4 (49-114)||(23976247-23976312)
chr4 (43-143)||(17628986-17629086)
chr4 (17-104)||(4186224-4186311)
chr4 (17-112)||(44831046-44831141)
chr4 (49-95)||(27578485-27578531)
chr4 (18-92)||(33764929-33765003)
chr4 (17-151)||(15306087-15306227)
chr4 (40-135)||(4185741-4185836)
chr4 (51-94)||(42838690-42838733)
chr4 (49-94)||(23091539-23091584)
chr4 (49-86)||(39902481-39902518)
chr4 (23-107)||(34554483-34554567)
chr4 (58-114)||(53391934-53391990)
chr4 (64-96)||(27578952-27578984)
chr4 (49-153)||(45682211-45682315)
[»] chr1 (42 HSPs)
chr1 (17-251)||(20054082-20054316)
chr1 (17-251)||(20054538-20054772)
chr1 (17-251)||(20054994-20055228)
chr1 (17-251)||(20055450-20055684)
chr1 (17-251)||(20055906-20056140)
chr1 (17-251)||(20056362-20056596)
chr1 (17-251)||(20057265-20057499)
chr1 (17-252)||(16451935-16452170)
chr1 (17-252)||(16461088-16461323)
chr1 (17-251)||(20845663-20845897)
chr1 (17-251)||(20057721-20057955)
chr1 (50-251)||(38340816-38341017)
chr1 (17-251)||(52250116-52250350)
chr1 (17-251)||(43057525-43057759)
chr1 (17-247)||(12883438-12883668)
chr1 (17-251)||(51372876-51373110)
chr1 (17-251)||(20056818-20057043)
chr1 (17-251)||(43057067-43057300)
chr1 (18-252)||(30872953-30873188)
chr1 (49-162)||(35759642-35759755)
chr1 (40-162)||(35760939-35761061)
chr1 (17-162)||(20061193-20061338)
chr1 (49-198)||(50002741-50002890)
chr1 (40-251)||(50003100-50003311)
chr1 (17-135)||(2328341-2328459)
chr1 (49-251)||(31822697-31822899)
chr1 (17-163)||(50002287-50002433)
chr1 (49-166)||(2634919-2635036)
chr1 (17-162)||(46693737-46693883)
chr1 (18-251)||(7548003-7548234)
chr1 (51-252)||(10820501-10820702)
chr1 (20-129)||(16907266-16907375)
chr1 (17-106)||(20060342-20060431)
chr1 (49-162)||(23180729-23180842)
chr1 (17-112)||(12728040-12728136)
chr1 (34-123)||(16410742-16410831)
chr1 (54-129)||(46411173-46411248)
chr1 (23-104)||(2739578-2739660)
chr1 (23-116)||(2634511-2634604)
chr1 (40-112)||(16440604-16440676)
chr1 (40-92)||(31823109-31823161)
chr1 (219-252)||(9189351-9189384)
[»] chr2 (38 HSPs)
chr2 (17-252)||(25337999-25338234)
chr2 (17-251)||(33174868-33175102)
chr2 (17-252)||(25434058-25434293)
chr2 (17-252)||(29804591-29804826)
chr2 (17-251)||(41754199-41754433)
chr2 (17-251)||(8256436-8256670)
chr2 (20-252)||(18098883-18099116)
chr2 (17-251)||(16379302-16379537)
chr2 (18-251)||(27882929-27883162)
chr2 (17-251)||(33770920-33771145)
chr2 (49-254)||(15619805-15620010)
chr2 (17-248)||(1706955-1707185)
chr2 (21-251)||(33174415-33174643)
chr2 (51-247)||(18447954-18448150)
chr2 (17-251)||(1912434-1912668)
chr2 (17-222)||(16378877-16379081)
chr2 (49-162)||(30966233-30966346)
chr2 (17-162)||(24818325-24818470)
chr2 (17-162)||(30966689-30966834)
chr2 (49-254)||(15639647-15639846)
chr2 (17-251)||(38898914-38899148)
chr2 (38-163)||(1953153-1953278)
chr2 (23-162)||(29259628-29259767)
chr2 (49-162)||(5399851-5399964)
chr2 (18-159)||(20502023-20502165)
chr2 (121-251)||(18098667-18098798)
chr2 (49-152)||(30963754-30963857)
chr2 (17-163)||(11388187-11388331)
chr2 (20-114)||(13191021-13191115)
chr2 (20-109)||(8073944-8074033)
chr2 (17-142)||(11394554-11394677)
chr2 (51-114)||(30963299-30963362)
chr2 (54-166)||(30961922-30962042)
chr2 (17-150)||(83028-83161)
chr2 (51-180)||(16541966-16542095)
chr2 (58-110)||(8181394-8181446)
chr2 (49-110)||(36924456-36924519)
chr2 (50-104)||(26864851-26864905)
[»] chr3 (47 HSPs)
chr3 (49-252)||(39653073-39653276)
chr3 (17-251)||(11180036-11180269)
chr3 (17-251)||(28561656-28561890)
chr3 (17-249)||(50347658-50347890)
chr3 (49-251)||(16811291-16811493)
chr3 (17-251)||(13150101-13150334)
chr3 (17-238)||(32227223-32227444)
chr3 (49-253)||(14813857-14814061)
chr3 (49-246)||(16810840-16811037)
chr3 (17-251)||(37044944-37045179)
chr3 (23-240)||(30529608-30529825)
chr3 (17-252)||(32796937-32797171)
chr3 (17-191)||(25239079-25239253)
chr3 (17-248)||(25230250-25230482)
chr3 (17-248)||(25237837-25238069)
chr3 (17-205)||(32227457-32227644)
chr3 (17-251)||(2911005-2911239)
chr3 (18-224)||(20885120-20885325)
chr3 (22-224)||(25230712-25230914)
chr3 (22-224)||(25238299-25238501)
chr3 (17-162)||(31284278-31284423)
chr3 (17-198)||(39640900-39641081)
chr3 (19-162)||(25248110-25248253)
chr3 (51-162)||(8067279-8067390)
chr3 (19-162)||(41472300-41472442)
chr3 (51-205)||(14820110-14820264)
chr3 (21-251)||(25803010-25803240)
chr3 (17-131)||(32386736-32386850)
chr3 (17-162)||(27187332-27187477)
chr3 (49-161)||(7477191-7477303)
chr3 (49-161)||(7493881-7493993)
chr3 (17-112)||(13150556-13150651)
chr3 (17-112)||(25238686-25238781)
chr3 (17-109)||(4067362-4067454)
chr3 (49-114)||(29224371-29224436)
chr3 (154-251)||(39653530-39653627)
chr3 (54-126)||(47518358-47518430)
chr3 (49-152)||(25802582-25802685)
chr3 (118-252)||(13155307-13155438)
chr3 (171-252)||(970875-970956)
chr3 (58-162)||(41473996-41474100)
chr3 (40-126)||(31103985-31104071)
chr3 (51-93)||(3890046-3890088)
chr3 (51-93)||(3899868-3899910)
chr3 (207-251)||(25238863-25238907)
chr3 (49-116)||(26310023-26310090)
chr3 (102-162)||(12820643-12820703)
[»] scaffold0243 (1 HSPs)
scaffold0243 (17-251)||(1130-1364)
[»] chr7 (49 HSPs)
chr7 (17-251)||(34405593-34405827)
chr7 (17-251)||(2189054-2189288)
chr7 (17-250)||(36422163-36422396)
chr7 (49-253)||(29357490-29357693)
chr7 (17-251)||(6747600-6747834)
chr7 (51-251)||(43233323-43233523)
chr7 (17-205)||(2193212-2193400)
chr7 (17-251)||(679727-679960)
chr7 (61-254)||(26957603-26957796)
chr7 (20-251)||(2611657-2611888)
chr7 (17-243)||(35527123-35527348)
chr7 (17-251)||(42515455-42515688)
chr7 (17-224)||(28495791-28495998)
chr7 (17-251)||(35474123-35474357)
chr7 (17-162)||(2941759-2941904)
chr7 (17-162)||(18833285-18833430)
chr7 (17-162)||(42515091-42515236)
chr7 (17-162)||(9124958-9125103)
chr7 (17-162)||(13125138-13125283)
chr7 (20-163)||(6719079-6719222)
chr7 (52-162)||(11517426-11517535)
chr7 (17-195)||(28495610-28495788)
chr7 (77-253)||(3305374-3305550)
chr7 (119-251)||(10430673-10430805)
chr7 (17-161)||(36015413-36015557)
chr7 (17-197)||(46425705-46425885)
chr7 (22-251)||(29039027-29039248)
chr7 (51-162)||(5406624-5406735)
chr7 (118-252)||(2463551-2463685)
chr7 (17-112)||(2465782-2465877)
chr7 (17-135)||(2465950-2466068)
chr7 (49-198)||(22529269-22529418)
chr7 (51-159)||(25182363-25182471)
chr7 (71-152)||(13124757-13124838)
chr7 (17-166)||(31406586-31406735)
chr7 (54-144)||(11372468-11372558)
chr7 (17-111)||(26421307-26421401)
chr7 (49-114)||(31743858-31743923)
chr7 (20-132)||(1628745-1628854)
chr7 (17-135)||(26421762-26421880)
chr7 (69-251)||(16811900-16812074)
chr7 (49-163)||(9623206-9623320)
chr7 (23-112)||(16192368-16192457)
chr7 (61-130)||(6585639-6585708)
chr7 (64-114)||(2490086-2490136)
chr7 (57-130)||(33316759-33316832)
chr7 (207-251)||(2189510-2189554)
chr7 (25-251)||(37672064-37672296)
chr7 (18-134)||(11372926-11373042)
[»] scaffold0333 (2 HSPs)
scaffold0333 (17-253)||(4469-4705)
scaffold0333 (17-251)||(4926-5165)
[»] scaffold0168 (1 HSPs)
scaffold0168 (17-252)||(2651-2886)
[»] scaffold0088 (1 HSPs)
scaffold0088 (48-251)||(23583-23786)
[»] scaffold0002 (2 HSPs)
scaffold0002 (17-251)||(154668-154901)
scaffold0002 (118-252)||(151550-151681)
[»] scaffold0664 (1 HSPs)
scaffold0664 (26-249)||(3993-4207)
[»] scaffold0047 (3 HSPs)
scaffold0047 (17-224)||(17600-17807)
scaffold0047 (17-200)||(18137-18319)
scaffold0047 (155-251)||(17819-17916)
[»] scaffold0322 (2 HSPs)
scaffold0322 (17-161)||(18966-19110)
scaffold0322 (99-162)||(18205-18268)
[»] scaffold0499 (1 HSPs)
scaffold0499 (17-163)||(2053-2199)
[»] scaffold0024 (1 HSPs)
scaffold0024 (17-161)||(105720-105864)
[»] scaffold0007 (1 HSPs)
scaffold0007 (49-162)||(142308-142421)
[»] scaffold0040 (1 HSPs)
scaffold0040 (22-162)||(2217-2357)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-162)||(107465-107610)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-162)||(10299-10444)
[»] scaffold0005 (2 HSPs)
scaffold0005 (49-162)||(245085-245198)
scaffold0005 (17-150)||(245526-245659)
[»] scaffold0022 (2 HSPs)
scaffold0022 (49-162)||(162712-162825)
scaffold0022 (17-128)||(69817-69928)
[»] scaffold0557 (2 HSPs)
scaffold0557 (17-112)||(2154-2249)
scaffold0557 (118-251)||(660-793)
[»] scaffold0442 (1 HSPs)
scaffold0442 (118-251)||(2414-2548)
[»] scaffold0391 (1 HSPs)
scaffold0391 (53-108)||(14794-14849)
[»] scaffold0101 (1 HSPs)
scaffold0101 (50-108)||(45439-45497)
[»] scaffold0036 (1 HSPs)
scaffold0036 (20-97)||(26134-26211)
[»] scaffold0389 (1 HSPs)
scaffold0389 (17-75)||(13535-13593)


Alignment Details
Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 17 - 500
Target Start/End: Original strand, 14771721 - 14772203
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||||| ||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  14771721 ctgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagt 14771820  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| |||||| ||||||||||| ||||||||| |||||||| |||||  ||||||||||||||||||||||||||||| ||||  |||| ||||    
T  14771821 ctcatacctacacggcttcgggatccctctcattccggcgtgattcgcttcatcaagaagctgtcgggagtcgctcattgtcgtgccttgcgcaccggcg 14771920  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaatgcctctattct---ggnnnnnnnaacaagtcaaaatgaattatat---tataaagtaaccatt 310  Q
    ||||||||  ||||||||||||| |||||||||||||||| |||||||   |        ||||||||||||  ||||||||    || ||  |||||||    
T  14771921 atcactccctgccctcgtcagccgtgggtgttacaatgccgctattctagggtttcttttaacaagtcaaaacaaattatatcaccatgaaacaaccatt 14772020  T
Q  311 tttcctagtg-aagatttatcgaagagaacgccaaaagtttaaaacaagatgatatgataaaccaacaataaacaaagattaacaaatacccaaacaagt 409  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||       
T  14772021 tttcctagtgcaagatgtatcgaagagaacgacaaaagtttaaaacaagatgatctgataaaccaacagtaaacaaagattaac-aatacccaaaca--- 14772116  T
Q  410 agtaatagggcaagcaaaaccaccaactaagataacctattccaaaaaattgatttgagtttgctattggtagcgccactattggtgtttt 500  Q
    |||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14772117 agtaatagg----gcaaaaccaccaactaagataacctattccaaaaaattgatttgagtttgctattggtagcgccactattggtgtttt 14772203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 20850433 - 20850231
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||  || |||| |||    
T  20850433 agaagatgcatcttgttgatataggtagtacaaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctca 20850334  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  20850333 ttccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgtt 20850234  T
Q  249 aca 251  Q
    |||    
T  20850233 aca 20850231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 20 - 251
Target Start/End: Complemental strand, 21312112 - 21311881
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    |||| |||||||||||| | |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |  |    
T  21312112 tggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaaccatgcagtctc 21312013  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||||||| |||||  || |||| |||||| ||||||||||  ||| |||||||||| |||||||||||||||||| || |||| ||||||||||| |    
T  21312012 atacctgcacagcctcatgaaccctctcattctggtgtgattcagttcctttagaagctatcgggagtcgctcattgttgtgccttgtgcactggcgacc 21311913  T
Q  220 actcctcgccctcgtcagccttgggtgttaca 251  Q
    ||| | ||||||||||||||||||||||||||    
T  21311912 acttcccgccctcgtcagccttgggtgttaca 21311881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 3652630 - 3652398
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||  ||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| | |    
T  3652630 ctgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatgtagt 3652531  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| ||| ||||| |||||||| |||||||| ||||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||| | ||    
T  3652530 cccatacctacacagcctcaggatccctctcattccgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccgacg 3652431  T
Q  217 atcactcctcgccctcgtcagccttgggtgtta 249  Q
    | |||||| ||||||| ||||||||||||||||    
T  3652430 accactccccgccctcatcagccttgggtgtta 3652398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 2681219 - 2681452
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| |||   ||||  || |||||||||||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||| |     
T  2681219 tgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcattcaaccatgcagtc 2681318  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    ||| |||| ||||||||| ||| |||| |||||||||||||||||| ||| | ||||| ||||| |||| ||||||||||||| |||| || || |||||    
T  2681319 ccaaacctacacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaactgtcaggagccgctcattgtcgtgccttgtgtaccggcga 2681418  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||||| ||||||||||||||||||||||||||    
T  2681419 ccactccccgccctcgtcagccttgggtgttaca 2681452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 49 - 250
Target Start/End: Original strand, 23986351 - 23986552
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| | | |||||||| ||||||||| |||||||| |||    
T  23986351 agaagatgcatcttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctca 23986450  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||| ||||||||| ||| | |||||||||||||||| ||||||||||| | |||| ||||| | ||| |||||| |||||||||||||||| ||| ||    
T  23986451 ttccgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcatgccttgtgcaccgacgaccactccccgccctcgtcagccttaggtatt 23986550  T
Q  249 ac 250  Q
    ||    
T  23986551 ac 23986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 6330914 - 6331148
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| | |    
T  6330914 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagt 6331013  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||| |||||| | |||||||| |||||||||  |  | |||||| ||||||||| ||||||||||| | |||| ||||| ||||    
T  6331014 ctcatacctacacggcctcaggatccatctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcg 6331113  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| | ||||||||||||||||||||||||    
T  6331114 accactccccaccctcgtcagccttgggtgttaca 6331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 20896692 - 20896924
Alignment:
Q  19 gtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattc 118  Q
    |||||||||||||| |||   ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |      
T  20896692 gtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtct 20896791  T
Q  119 catacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgat 218  Q
    ||||||| ||||||||  |||||||| |||||||| |||||||||  |  | |||||| ||||||||| ||||||||||| | |||| ||||  |||||     
T  20896792 catacctacacggcctaaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaacggcgac 20896891  T
Q  219 cactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||  || |||||||||||||||||||||||    
T  20896892 cactctccgtcctcgtcagccttgggtgttaca 20896924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 27334273 - 27334103
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||| ||     
T  27334273 agaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcg 27334174  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    ||||||||||||||  ||| | || ||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  27334173 ttccggtgtgattcagttcctctataagctgttgggagtcgttcattgtcgtgccttgtgcaccggcgatc 27334103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 27395013 - 27394843
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||| ||     
T  27395013 agaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcg 27394914  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    ||||||||||||||  ||| | || ||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  27394913 ttccggtgtgattcagttcctctataagctgttgggagtcgttcattgtcgtgccttgtgcaccggcgatc 27394843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 59 - 252
Target Start/End: Original strand, 2720608 - 2720801
Alignment:
Q  59 tcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtg 158  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |  |||||||||||| ||| ||||||||| |||||||||| ||    
T  2720608 tcttgttaatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacctgcacgaccttgggatccctctcattccggtatg 2720707  T
Q  159 attcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    ||| | ||| | ||||||||||| | ||||||||||||||||  ||| ||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  2720708 atttggttcgtctagaagctgtccgaagtcgctcattgtcgtgacttgtgcaccggcgaccactccccgccctcgtcagccttaggtgttacaa 2720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 2890841 - 2891073
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | ||||| || |||||| ||||||| |||||||||||||| || |||||||||||||| | |||||||||||||||| |    
T  2890841 ctgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaaccttccttcaaccatgcagt 2890940  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||||||||||||||| ||| ||||||   ||||||||||||| | ||||| ||||| |||| |||||||||||||  ||| ||||| |||     
T  2890941 cccatacctgcacggcctcgggat-cctctcattctaatgtgattcgattcctctagaa-ctgtcaggagccgctcattgtcgtggcttgtgcaccggca 2891038  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | || |||  |||||||||||||||||||||||||    
T  2891039 accagtccctgccctcgtcagccttgggtgttaca 2891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 11062429 - 11062196
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| | |    
T  11062429 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagccttccttcaaccatgtagt 11062330  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
    | ||||||| ||| ||||| |||| ||| ||||  || ||||||||| ||| | ||||| |||||||||| ||||||||||||| |||| ||||| || |    
T  11062329 ttcatacctacacagcctcaggat-cctctcatgtcgatgtgattcggttcctctagaaactgtcgggagccgctcattgtcgtgccttgtgcaccggtg 11062231  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| |||| |||| ||||||||| ||||||    
T  11062230 accactccccgccttcgtaagccttgggcgttaca 11062196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 17851517 - 17851286
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||  ||| | |||| ||| ||||||||||||||||||||| |||||||||||||||  |||||||||| ||| || ||||||||| |     
T  17851517 tgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagccttcttttaaccatgcagtc 17851418  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||| | |||||| ||||   || |||| ||| |||| |||| ||||| |||||    
T  17851417 ccatacttgcacggcctcgggatccctctcattccggtgtgattcggttcgtctagaagttgtctaaagccgctaattatcgtgccttgtgcaccggcga 17851318  T
Q  218 tcactcctcgccctcgtcagccttgggtgtta 249  Q
     |||| | ||||||||  ||||||||||||||    
T  17851317 acacttcccgccctcggtagccttgggtgtta 17851286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 17027533 - 17027677
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  17027533 ctgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 17027632  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
     |||||||||||||||||| |||||||| |||||||| |||||||    
T  17027633 cccatacctgcacggcctctggatccctctcattccgatgtgatt 17027677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 7912022 - 7911877
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  7912022 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgcagt 7911923  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     | ||||||||||||||||| ||||||| |||||||| ||||||||    
T  7911922 cctatacctgcacggcctcgagatccctctcattccgatgtgattc 7911877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 20126185 - 20126418
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||||| |||||||| |||   |||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| | |     
T  20126185 tgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagccttccttcaaccatgtagtc 20126284  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||| ||| ||||  |||||||| |||||||| ||||||||   |  | |||||| |||| |||| ||||||||||| | |||| ||||| |||||    
T  20126285 tcatacctacacagccttaggatccctctcattccgatgtgattcagcttgtctagaagttgtcaggagccgctcattgtcatgccttgtgcaccggcga 20126384  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||||| |||||||||| |||||||||||||||    
T  20126385 ccactccccgccctcgtcggccttgggtgttaca 20126418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 17851062 - 17850826
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||  ||| | |||| | | ||||||||||||||||||||| |||||||||||||||  |||||| ||| ||| || ||||||||| |    
T  17851062 ctgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagcattcttttaaccatgcagt 17850963  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||| |||||| |||| |||||||| |||||||||||||||||| ||| | |||||| |||||| || |||| |||||||| |||| ||||| ||||    
T  17850962 cccatacttgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagttgtcggaagccgctaattgtcgtgccttgtgcaccggcg 17850863  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaat 253  Q
    | |||| | |||||| || ||||||| || |||||||    
T  17850862 accacttcccgcccttgttagccttgagtattacaat 17850826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 3653051 - 3652889
Alignment:
Q  89 cttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtc 188  Q
    ||||||||| ||| |||||||||||| | |||||||| ||| ||||| |||||||| |||||||| ||||| ||| ||||| |||||||||||||||| |    
T  3653051 cttataagccttcgttcaaccatgcagtcccatacctacacagcctcaggatccctctcattccgatgtgagtcggttcatctagaagctgtcgggagcc 3652952  T
Q  189 gctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||||||||| |||| ||||| ||||| |||||| |||||||||||| |||||||||||||    
T  3652951 gctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagtcttgggtgttaca 3652889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23776584 - 23776352
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||| ||||||||||||||   ||||  || ||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| | |     
T  23776584 tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaaccatgtagtc 23776485  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| |||| ||| ||||||||| |||||||  ||| | ||||||||||||| || |||||||||||||||||| | ||  |||||    
T  23776484 ccatacctacaaggcctcaggatacctctcattccggcgtgattcagttcctctagaagctgtcggaagccgctcattgtcgtaccttgtacatcggcga 23776385  T
Q  218 tcactcctcgccctcgtcagccttgggtgttac 250  Q
     |||||  |  |||||||||| || ||||||||    
T  23776384 ccactctccatcctcgtcagctttcggtgttac 23776352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 7912451 - 7912309
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || |||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | ||    
T  7912451 tggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagttttccttcaaccatgcagtccc 7912352  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||    
T  7912351 atacctgcacggcctcgagatccctctcattccgatgtgattc 7912309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 254
Target Start/End: Original strand, 33775004 - 33775243
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatct--tgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||||||| ||| |||||  ||| |||||||||||||  ||||||||||||||| |||| ||||||||||||| | |||||||||||||||     
T  33775004 ctgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggtagcaccagacaattcttataatccttccttcaaccatgcg 33775103  T
Q  115 attccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactgg 214  Q
     |  ||||| |||||||||||| |||| || ||||||| |||||||||| ||  | ||||| |||| |||||  ||||||| |||| |||| ||||| |     
T  33775104 gtcacatacttgcacggcctcgcgatcactctcattccagtgtgattcgttttgtgtagaaactgttgggagctgctcattatcgtgccttgtgcaccga 33775203  T
Q  215 cgatcactcctcgccctcgtcagccttgggtgttacaatg 254  Q
    ||| |||| |  | |||| ||| |||||||||||||||||    
T  33775204 cgaccactacctgtcctcatcaaccttgggtgttacaatg 33775243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 9440343 - 9440457
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||| | || |||||||| |||    
T  9440343 agaaaatgcatcttgttgatataagtagtaccgaacaattcttataagctttcattcaaccatgcagttccatacctgcacgacttcaggatccctctca 9440442  T
Q  149 ttccggtgtgattcg 163  Q
    ||||| |||||||||    
T  9440443 ttccgatgtgattcg 9440457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13492933 - 13492788
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  13492933 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttccttcaaccatgcagt 13492834  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      ||||||||||| ||||| |||||| | |||||||| | ||||||    
T  13492833 ctcatacctgcacagcctcaggatccttctcattccgatatgattc 13492788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 21311627 - 21311423
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||| |||||||| || |||||| ||||||||||||||||||||  |||||||||||||||| | |||||| || ||||||||  || |||| |||    
T  21311627 agaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctctca 21311528  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcct-cgccctcgtcagccttgggtgt 247  Q
    ||||| ||||||||| ||  | |||||||| ||| ||  | ||||||||||| |||| ||||| ||||| |||||||  ||||| ||||||| |||||||    
T  21311527 ttccgatgtgattcgttttctctagaagctttcgagaacctctcattgtcgttccttgtgcaccggcgaccactcctatgcccttgtcagccgtgggtgt 21311428  T
Q  248 tacaa 252  Q
    |||||    
T  21311427 tacaa 21311423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 15929726 - 15929492
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||| | |    
T  15929726 ctgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagccttcattcaaccatgtagt 15929627  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     | |||| | || ||| |  ||||| || | |||| | ||||||||||||||| |||||| |||| |||| ||||||||||| | ||||||||||   ||    
T  15929626 ccaatacatacaaggcattaggatctctcttattctgatgtgattcgattcatctagaagttgtccggagccgctcattgtcatgccttatgcaccaacg 15929527  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||| ||  |||||||||| |||||||| |||||    
T  15929526 accacacccggccctcgtcatccttgggtattaca 15929492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 13191547 - 13191659
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| ||  | ||  |||||||| |||    
T  13191547 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctacatagtcttaggatccctctca 13191646  T
Q  149 ttccggtgtgatt 161  Q
    ||||| |||||||    
T  13191647 ttccgatgtgatt 13191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 17731156 - 17731260
Alignment:
Q  58 atcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgt 157  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| | ||||||||| |||||||| |||||||| |||||||| |||    
T  17731156 atcttgttgatataggtagtaccaaacaattcttataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgt 17731255  T
Q  158 gattc 162  Q
    |||||    
T  17731256 gattc 17731260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 16520112 - 16519967
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||| | |    
T  16520112 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagccttccttcgaccatgtagt 16520013  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      ||||||| ||| ||||| |||||||| |||||||| ||||||||    
T  16520012 ctcatacctacacagcctcaggatccctctcattccgatgtgattc 16519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 31821728 - 31821860
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |  ||||||| || ||||||  ||||||| |||||    
T  31821728 aagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctctcatt 31821827  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgg 183  Q
    ||| ||||||||| ||  | |||||||||||||    
T  31821828 ccgatgtgattcggtttctctagaagctgtcgg 31821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 15929311 - 15929111
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||| ||||||||| |||||||||| | |||||||||||||||||||||||| |||||||| || | |  |||||||  |||||||| |||||| | | |    
T  15929311 agaatatgcatcttattgatataggcattaccaaacaattcttataagcttttcttcaaccttgtagtctcatacctaaacggcctcaggatccatctta 15929212  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||  | ||||||||| || || |||||| | || | |||||||||||||| | |||| | ||   |||| |||||| | ||||| |||||||||||||||    
T  15929211 ttatgttgtgattcggttaatctagaagatatctgaagtcgctcattgtcatgccttgtacatcagcgaccactccccaccctcatcagccttgggtgtt 15929112  T
Q  249 a 249  Q
    |    
T  15929111 a 15929111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 20735836 - 20735621
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||| ||||  ||| ||||||  || ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||| |||| | |  |    
T  20735836 tggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagccttcctacaatcatgtagtcac 20735737  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||| ||| | |||  ||||||| |||||  | ||||||  | ||   | | ||| |||| ||||||||||||||||   |||||||||| |||||||    
T  20735736 atacctacacagtctcaagatccctctcattatgatgtgatctggttgcctga-aagttgtcaggagtcgctcattgtcaagccttatgcaccggcgatc 20735638  T
Q  220 actcctcgccctcgtca 236  Q
    || ||||||||||||||    
T  20735637 acccctcgccctcgtca 20735621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 9440485 - 9440575
Alignment:
Q  72 ggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||||||||||||||||||||| ||| |||||||||| | | ||||||||||||| | || |||||||| |||||||| ||||||||    
T  9440485 ggtagtaccaaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgtgattc 9440575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 9440882 - 9440972
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacg 130  Q
    ||||| || |||| |||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||    
T  9440882 ctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttcaaccatgtagttccatgcctgcacg 9440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 32293005 - 32292916
Alignment:
Q  41 tactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacg 130  Q
    ||||||| | |||||| || |||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |  ||||||||||||    
T  32293005 tactaaaaacaagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacg 32292916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 9352206 - 9352062
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||| |||||||||||||||||||| | |||||||  | ||||| |||||| | |    
T  9352206 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagtctcccttcgaccatgtagt 9352107  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
      ||||||| ||| ||||| |||||||| ||||| || |||||||    
T  9352106 ctcatacctacacagcctcaggatccctctcatttcgatgtgatt 9352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 13492476 - 13492396
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 97  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13492476 ctgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagc 13492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 28065874 - 28065930
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 107  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  28065874 aagatgcatcttgttgatagagatagtaccaaacaattcttataagctttcattcaa 28065930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 12194472 - 12194328
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||  | ||  ||| |||||||||||||||||||||||| |||| ||||| || | |||||||  || |||||| |||||| |    
T  12194472 ctgtggagttcttatggaatgaattataaaaaagaagatgcatcttgttgatatagatagtgccaaaaaaat-ttataagtctttcttcaatcatgcagt 12194374  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
    | |||| |||||||| ||| |||| ||| |||||||  |||||||||    
T  12194373 t-catatctgcacggtctcaggattcctctcattccaatgtgattcg 12194328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 17205479 - 17205335
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| ||| | |||| ||| | |||||| ||||||||| || |||||||||||||||||||||||||   ||| ||||| |||||| || |    
T  17205479 tggagttcttatggaatgggctaccaaa-acaagatgaatcttgttggtaaaggtagtaccaaacaattcttataattcttcattcaatcatgcagtttc 17205381  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgat 165  Q
    |||||  || || |||   |||||| | |||||| |||||||||||    
T  17205380 ataccaccatggtctcaaaatccctctaattccgatgtgattcgat 17205335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 28583071 - 28582995
Alignment:
Q  53 gatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacg 130  Q
    |||||||||||||||||||| | ||| |||| ||||||||||||| ||| ||||||||| ||| || |||||||||||    
T  28583071 gatgcatcttgttgatatagatcgtatcaaataattcttataagccttcattcaaccatacaa-tctatacctgcacg 28582995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 1991697 - 1991602
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    ||||| ||||||||||||||   ||||  || ||||||||||||||||| | ||| ||| ||||||||||||||| ||||| ||| | ||||||||    
T  1991697 ctgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagccttcttccaaccatg 1991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 20732690 - 20732627
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||| |||||| || || ||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  20732690 agaatatgcatattattaatataggtagtaccaaataattcttataagccttcctacaaccatg 20732627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 9441135 - 9441099
Alignment:
Q  76 gtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9441135 gtaccaaacaattcttataagctttccttcaatcatg 9441099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 3885123 - 3885186
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||| || |||||  |||| ||||||||||||||||||| ||||| |||||||||| |||||    
T  3885123 aagatgtattttgttagtatatgtagtaccaaacaattcttttaagcattccttcaactatgca 3885186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 3e-77; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 10845027 - 10844793
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10845027 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagt 10844928  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  10844927 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 10844828  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  10844827 accactccccgccctcgtcagccttgggtgttaca 10844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 22026523 - 22026289
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |    
T  22026523 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcattcaaccatgcagt 22026424  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||||||||||  || |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||| | |||| ||||| ||||    
T  22026423 cccatacctgcacggcctcacgaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcatgccttgtgcaccggcg 22026324  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||||||||||||||||||||||||||||||    
T  22026323 accactcctcgccctcgtcagccttgggtgttaca 22026289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 27926043 - 27925809
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |    
T  27926043 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgcagt 27925944  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| |||||  |||    
T  27925943 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccagcg 27925844  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| || |||||||||||||||||||||||    
T  27925843 accactccccgtcctcgtcagccttgggtgttaca 27925809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 32292541 - 32292307
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||  ||| |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  32292541 ctgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaaccatgcagt 32292442  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||| ||||||||||| ||| |||| |||||||||||||||||| ||| | ||||| || ||||||| ||||||||||||| |||| ||||| ||||    
T  32292441 cccatacttgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaactatcgggagccgctcattgtcgtgccttgtgcaccggcg 32292342  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||||| ||||||||||||||||||||||||||    
T  32292341 atcactccccgccctcgtcagccttgggtgttaca 32292307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 8080344 - 8080579
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |    
T  8080344 ctgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaaccatgtagt 8080443  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||| || |||||||| |||||||| ||||||||  ||| | ||||||||||   ||| ||||||||||||| |||| ||||| ||||    
T  8080444 cccatacctacacggcttcaggatccctctcattccgatgtgattcagttcctctagaagctgttaagagccgctcattgtcgtgccttgtgcaccggcg 8080543  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | ||||||||||||||||||||||||||||||||||    
T  8080544 accactcctcgccctcgtcagccttgggtgttacaa 8080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 22549029 - 22549231
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |  ||||||||||| ||||| |||  ||| |||    
T  22549029 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcacatacctgcacagcctcaggaagcctctca 22549128  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  22549129 ttccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgtt 22549228  T
Q  249 aca 251  Q
    |||    
T  22549229 aca 22549231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 12827256 - 12827491
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | | |    
T  12827256 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccaagtagt 12827355  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||| |||||||| ||||||||| |||||||| ||| | ||||||| ||| |||| ||||||||||||| |||| ||||| ||||    
T  12827356 cccatacctacaaggcctcaggatccctctcattccggcgtgattcggttcttctagaagcagtcaggagccgctcattgtcgtgccttgtgcaccggcg 12827455  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    |||||||| | |||||||||||||||||||||||||    
T  12827456 atcactccccaccctcgtcagccttgggtgttacaa 12827491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 41659139 - 41659341
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||| | || ||| |||| |||    
T  41659139 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacgacatcaggaaccctctca 41659238  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | |||||||||||||||| | |||||||||||  ||| ||||| ||||| |||||| |||||||||||||||| ||||||    
T  41659239 ttccggtgtgattcggttcctctagaagctgtcgggagccactcattgtcgt-gcttgtgcaccggcgaccactccccgccctcgtcagccttaggtgtt 41659337  T
Q  249 acaa 252  Q
    ||||    
T  41659338 acaa 41659341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 6464912 - 6465146
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||| ||||| |||   |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  6464912 ctgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagt 6465011  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
    ||||||||| |||||||||  ||| ||| |||||||  ||||||||||||  | |||||| ||| ||||| |||||||| |||| |||| ||||| ||||    
T  6465012 tccatacctacacggcctcatgattcctctcattccaatgtgattcgattactctagaagttgttgggagccgctcattatcgtgccttgtgcaccggcg 6465111  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||||||||||||||||||| | |||||||||||    
T  6465112 accactcctcgccctcgtcagacgtgggtgttaca 6465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 22548583 - 22548785
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |  ||||||||||| ||||| ||| |||| |||    
T  22548583 agaagatgcatcttgttgatataggtagtaccaaacaattcttataaaacttccttcaaccatgcagtcacatacctgcacagcctcaggaaccctctca 22548682  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||| | ||| | ||||||||||| |||| |||||||||| || |||| ||||||||||| |||||| | ||||| |||||||||||||||    
T  22548683 ttccggtgtgattaggttcctctagaagctgtcaggagccgctcattgtagtgccttgtgcactggcgaccactccccaccctcatcagccttgggtgtt 22548782  T
Q  249 aca 251  Q
    |||    
T  22548783 aca 22548785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 28453482 - 28453249
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||| ||||||||||| ||| | |||| | | ||||||||||||||||| ||||||||||||  |||||||||||||||| |||| |||||||||| | |    
T  28453482 ctgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaaccatgaagt 28453383  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      |||||||||||| ||||||||||||| ||||||||||||||||| | |||| || ||| ||||||||| ||||||||||||| |||| ||||| |||     
T  28453382 ctcatacctgcacgacctcgggatccctctcattccggtgtgattc-agtcatctaaaagttgtcgggagccgctcattgtcgtgccttgtgcaccggca 28453284  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  28453283 accactccccgccctcgtcagccttgggtgttaca 28453249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 33852261 - 33852493
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||| |||||||||| ||| | |||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |     
T  33852261 tgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagttttccttcaaccatacagtc 33852360  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||||||||| |||||||||||| |||||| ||||||||||  ||| | | |||| | ||||||| ||||||||||||| |||| ||||| |||||    
T  33852361 tcatacctgcacggtctcgggatccctctcattctggtgtgattcagttcctcttgaagttatcgggagccgctcattgtcgtgccttgtgcaccggcga 33852460  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||| | ||||||||||||||||||||||||||    
T  33852461 ccact-cacgccctcgtcagccttgggtgttaca 33852493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 51 - 253
Target Start/End: Original strand, 27022374 - 27022576
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| | | |||||||| || ||||||  ||||||| |||||    
T  27022374 aagatgcatgttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagtcccatacctacatggcctcaagatccctctcatt 27022473  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttac 250  Q
    ||| |||||||||  || | |||||||||||||||| ||||||||||||| |||| ||||| ||||| |||||| || ||||||||||||||||| ||||    
T  27022474 ccgatgtgattcggctcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtattac 27022573  T
Q  251 aat 253  Q
    |||    
T  27022574 aat 27022576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 28375088 - 28375290
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||||||||||||||| |||||||| |||    
T  28375088 agaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctca 28375187  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||  ||||||||||| ||| | |||||||||||||||| |||| |||||||| |||| ||||| | ||| |||||   |||||||| ||| |||| ||||    
T  28375188 ttatggtgtgattcgtttcgtctagaagctgtcgggagccgctaattgtcgtgccttgtgcaccgacgaccactctctgccctcgttagctttggttgtt 28375287  T
Q  249 aca 251  Q
    |||    
T  28375288 aca 28375290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 22840531 - 22840765
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||  ||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||| |||||| | |    
T  22840531 ctgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtagt 22840630  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||  ||||| ||||| || |||||||| ||||||||  ||  | |||||| | ||||||| |||||||| ||||  ||||||||| ||||    
T  22840631 ctcatacctacaaagcctcaggatctctctcattccgatgtgattcagttactctagaagttatcgggagccgctcattatcgtgtcttatgcaccggcg 22840730  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| |||||| |||||||||||||||||||    
T  22840731 accactccccgcccttgtcagccttgggtgttaca 22840765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 27021913 - 27022111
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccct---- 144  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |   |||||| || |||||| ||||||||        
T  27021913 agaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctctca 27022012  T
Q  145 atcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgg 243  Q
     |||||||| |||||||||  || | |||||| ||||||||| | ||||||||||| |||| |||||  |||| |||||| | ||||||||||||||||    
T  27022013 ttcattccgatgtgattcggctcctctagaagttgtcgggagccactcattgtcgtgccttgtgcacccgcgaccactccccaccctcgtcagccttgg 27022111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 34308482 - 34308626
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| ||||| ||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || |     
T  34308482 tgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttccttcaaccatacagtc 34308581  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||| || |||||||| |||||||| |||||||| ||||||||    
T  34308582 tcatacttgtacggcctcaggatccctttcattccgatgtgattc 34308626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 10844617 - 10844763
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  10844617 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagccttccttcaaccatgcagt 10844716  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
     ||||||||||| |||||| ||| |||| ||||||||||||| ||||    
T  10844717 cccatacctgcaaggcctcaggaaccctctcattccggtgtggttcg 10844763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 2044202 - 2044036
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||| ||||| ||| | |||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |    
T  2044202 ctgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaaccatgtagt 2044103  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgg 183  Q
      ||||||| ||| ||||| |||||||| |||||||| ||||||||  ||| | |||||| ||||||    
T  2044102 ctcatacctacacagcctcaggatccctctcattccgatgtgattctgttcctctagaagttgtcgg 2044036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 25144916 - 25144771
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  25144916 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagcctgccttcaatcatgcaat 25144817  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||||||| ||||| |||| || |||||| | ||||||||    
T  25144816 cccatacctgcacgacctcgagatctctctcattctgatgtgattc 25144771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 34308937 - 34309086
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatat----aggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| ||||| ||||  || ||||||||||||||||||||||    ||||||||||||||| ||||||||||| |||||||||||||     
T  34308937 ctgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagccttccttcaaccata 34309036  T
Q  113 caattccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    || |  ||||| || |||||||| |||||||| |||||||| ||||||||    
T  34309037 cagtctcatacttgtacggcctcaggatccctctcattccgatgtgattc 34309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 12100835 - 12100711
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| ||||||||||||||   ||||  || |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  12100835 ctgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaaccatgcagt 12100736  T
Q  117 tccatacctgcacggcctcgggatc 141  Q
      |||||||| |||||||| |||||    
T  12100735 ctcatacctgtacggcctcaggatc 12100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 41913110 - 41912994
Alignment:
Q  21 ggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcca 120  Q
    |||||||||||| ||| | |||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||| | |||    
T  41913110 ggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaaacatgcagtccca 41913011  T
Q  121 tacctgcacggcctcgg 137  Q
    |||||||| ||||||||    
T  41913010 tacctgcatggcctcgg 41912994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 17103223 - 17103089
Alignment:
Q  19 gtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattc 118  Q
    |||||||||||||| |||   ||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |      
T  17103223 gtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagtcttccttcaaccatgcagtct 17103124  T
Q  119 catacctgcacggcctcgggatccctatcattccg 153  Q
    |||||||| |||||||| ||||| || ||||||||    
T  17103123 catacctgtacggcctcaggatctctctcattccg 17103089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 21316111 - 21316256
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||| || ||| ||||||||||||||||||||||||||||||||||||||| |||||  || || |||||| || |    
T  21316111 ctgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccatacagt 21316210  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      ||||||||||||||||  |||||||| ||||  || ||||||||    
T  21316211 ctcatacctgcacggccttaggatccctctcatcgcgatgtgattc 21316256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 22705282 - 22705181
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| || | |||||||| |||||| || |||||||| |||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcatt 22705183  T
Q  151 cc 152  Q
    ||    
T  22705182 cc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 25147677 - 25147536
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |  |    
T  25147677 tggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagccttccttcaaccatgcagtctc 25147578  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
    |||||| ||| | ||  ||||| || |||||||| |||||||    
T  25147577 atacctacacagtcttaggatctctctcattccgatgtgatt 25147536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 25148111 - 25147977
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||| |  || |    
T  25148111 ctgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagccttccttcaacgacacagt 25148012  T
Q  117 tccatacctgcacggcctcgggatccctatcattc 151  Q
     |||||||| |||| ||||||||||||| ||||||    
T  25148011 cccatacctacacgacctcgggatccctctcattc 25147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 3745245 - 3745150
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||| ||||| ||| | |||| ||| ||||||||||| |||||| |||||||||||| ||||| |||||||||| |||||||||||||||    
T  3745245 ctgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaaccatg 3745150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 27819280 - 27819343
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  27819280 agaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttcaaccatg 27819343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 3744777 - 3744664
Alignment:
Q  22 gagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccat 121  Q
    |||||||||||||||   |||| ||| ||||| ||||| |||||| ||||||||||  |||||||||||||||||  |||||||||||||||| | ||||    
T  3744777 gagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaaccatgcagtcccat 3744678  T
Q  122 acctgcacggcctc 135  Q
    |||| |||| ||||    
T  3744677 acctacacgacctc 3744664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 6466820 - 6466648
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| ||||||||| ||||||||| |||| | ||| | |||||| |||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag-tctcctttaaccatgcagttccatacccgcacagtctcagaatccctctcatt 6466722  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcc 224  Q
    | | | ||||| | ||    | ||||||||| ||||  |||||||||| | |||| ||||||||| | ||||||    
T  6466721 ctgatatgatttggtttgcctggaagctgtcaggagctgctcattgtcatgccttgtgcactggcaaccactcc 6466648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 15567562 - 15567653
Alignment:
Q  21 ggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    ||||||||||||||||  ||||| ||| |||||||| ||||||||| |||| |||||  |||||||||||||||||| ||||||| ||||||    
T  15567562 ggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttccaccatg 15567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 1297110 - 1297040
Alignment:
Q  58 atcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgca 128  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |  ||||||||||    
T  1297110 atcttgttggtataggtagtaccaaacaattcttataagttttacttcaaccatgcagtctcatacctgca 1297040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 30334942 - 30335060
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||| ||||||||| ||||||||||| ||||||||| |||||||  ||| ||||||| |||| |  ||||||||||| | ||| |||||| | | |    
T  30334942 agaagatgtatcttgttggtataggtagtatcaaacaatttttataagtcttctttcaaccttgcagtcgcatacctgcacagtctcaggatccatctaa 30335041  T
Q  149 ttccggtgtgattcgattc 167  Q
    ||||| |||||||||||||    
T  30335042 ttccgatgtgattcgattc 30335060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 15819049 - 15819112
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||| |||||||||| |||||||||||||||| || ||||| ||||||||||||||    
T  15819049 agaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatg 15819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 30527484 - 30527626
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||||||| | ||||  || |||||||| ||||| ||||| || || ||||||||||||||||||||| | |  ||||| |||||| |    
T  30527484 ctgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttataag-tctggttcaaacatgcagt 30527582  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      |||||  | |||||||||| |||||| ||||||| |||||||||    
T  30527583 ctcatac--gtacggcctcggaatccctctcattccagtgtgattc 30527626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 15568041 - 15568100
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaacca 110  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||  ||||||||||||    
T  15568041 aagatgcatcttgttgatataggtcataccaaacaattgttataagtcttccttcaacca 15568100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 31283653 - 31283719
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaa 83  Q
    |||||||||||||||| ||| | ||||  || ||||||||||||||||| |||||||||||||||||    
T  31283653 ctgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 17429611 - 17429547
Alignment:
Q  50 gaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||| ||||||||||||||||||||||||||| ||| || |||||  |||||||||| |||||    
T  17429611 gaagatacatcttgttgatataggtagtaccaaataatactcataagtcttccttcaacaatgca 17429547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 29971450 - 29971528
Alignment:
Q  64 ttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatcc 142  Q
    ||||||||| ||||| ||||||||||||||||   |||||||||||||| | |  ||||||| ||||||||| ||||||    
T  29971450 ttgatatagatagtatcaaacaattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggatcc 29971528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 6466397 - 6466329
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattc 89  Q
    |||| |||||||||||| |||||| |||  ||||||||| ||||||| |||| |||||||||||||||||    
T  6466397 tggatttcttatgaaat-gactaccaaaaggaagatgcaacttgttggtataagtagtaccaaacaattc 6466329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 36968434 - 36968491
Alignment:
Q  54 atgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 111  Q
    |||||||||||||||||| |||| ||||| |||||||||||||   ||||||||||||    
T  36968434 atgcatcttgttgatataagtagcaccaatcaattcttataagtcatccttcaaccat 36968491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 20 - 251
Target Start/End: Complemental strand, 34867931 - 34867700
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    |||||||||||||||||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  34867931 tggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtccc 34867832  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| |||||      
T  34867831 atacctgcacggcctcaggaaccctctcattccggtgtgattcggttcttctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgact 34867732  T
Q  220 actcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||||||||||||||||||||||||||||||    
T  34867731 actcctcgccctcgtcagccttgggtgttaca 34867700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 49 - 253
Target Start/End: Complemental strand, 34371724 - 34371520
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | ||| ||||| ||||||| |||| |||| |||    
T  34371724 agaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaaccatgcagtcccacacctgtacggccttgggaaccctctca 34371625  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  34371624 ttccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgtt 34371525  T
Q  249 acaat 253  Q
    |||||    
T  34371524 acaat 34371520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 2193960 - 2193726
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  2193960 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 2193861  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || ||||||  ||||||| ||||||||| |||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  2193860 cccatacctacaaggcctcatgatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 2193761  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  2193760 accactccccgccctcgtcagccttgggtgttaca 2193726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 34372180 - 34371978
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | | |||||| || ||||||| |||| |||| |||    
T  34372180 agaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaaccatgtagtcccatacttgtacggccttgggaaccctctca 34372081  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||| ||||||||||| ||| | ||||||||||| |||| ||||||||||| | |||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  34372080 ttctggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcctgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgtt 34371981  T
Q  249 aca 251  Q
    |||    
T  34371980 aca 34371978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 10926948 - 10927183
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  10926948 ctgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagt 10927047  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||| |||| |||||||| |||||| | ||||||||| ||| | || |||||||||||||   ||||||||||| |||| ||||| | ||    
T  10927048 cccatacctacacgacctcaggatccctctcattctgatgtgattcggttcctctataagctgtcgggagctactcattgtcgtgccttgtgcaccgacg 10927147  T
Q  217 atcactcctc-gccctcgtcagccttgggtgttaca 251  Q
    |||||||| | ||||||||||||  |||||||||||    
T  10927148 atcactcccctgccctcgtcagctgtgggtgttaca 10927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 20039477 - 20039711
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||| ||||||||||| ||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |    
T  20039477 ctgtagagttcttatggaatgggctaccaaa-agaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaactatgtagt 20039575  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     | |||||| |||||||||  ||||||| |||||||| ||||||||| ||  | ||||||||||||||||  |||||||||| | |||| ||||| ||||    
T  20039576 cctatacctacacggcctcatgatccctctcattccgatgtgattcggtttgtctagaagctgtcgggagctgctcattgtcatgccttgtgcaccggcg 20039675  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | || ||| |||||||||||||||||||||||||||    
T  20039676 accattccccgccctcgtcagccttgggtgttacaa 20039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 21886151 - 21886382
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | ||    
T  21886151 tggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccatgcagtccc 21886250  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    ||||||||||  |||| ||| |||| |||||||||||||||||| ||| | ||||||||  | |||| ||||||||||||| |||| ||||| ||||| |    
T  21886251 atacctgcacaacctcaggaaccctctcattccggtgtgattcggttcctctagaagctaccaggagccgctcattgtcgtgccttgtgcaccggcgacc 21886350  T
Q  220 actcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||  ||||||| |||||||| |||||||||    
T  21886351 actctccgccctcatcagccttcggtgttaca 21886382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 39147083 - 39146849
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||| ||||| |||||| |||||||||||||||||  | |||||||||||| | |    
T  39147083 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataagtctaccttcaaccatgtagt 39146984  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||||||  ||||||| ||||| || ||||||||  ||| | |||||| |||| |||| ||||||||||||| |||| ||||| ||||    
T  39146983 cccatacctacacggcctcatgatccctctcatttcgatgtgattcagttcctctagaagttgtcaggagccgctcattgtcgtgccttgtgcaccggcg 39146884  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||||| | ||||||||||||||||||||||||    
T  39146883 atcactccccaccctcgtcagccttgggtgttaca 39146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 10927405 - 10927628
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  10927405 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagt 10927504  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| |||||||||  ||||||| |||||||| ||||||||| ||| | || ||| ||| |||||  |||||||||||| |||| ||||| | ||    
T  10927505 ctcatacctacacggcctcaagatccctctcattccgatgtgattcggttcctctataagttgttgggagctgctcattgtcgtgccttgtgcaccgacg 10927604  T
Q  217 atcactcctc-gccctcgtcagcc 239  Q
    |||||||| | |||||||||||||    
T  10927605 atcactcccctgccctcgtcagcc 10927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 27646837 - 27647072
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||||||| | |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |      
T  27646837 ctgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaaccatgtagc 27646936  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||||   |||||||| |||||||| ||||||||| ||| | |||||||||||||||| ||| ||||| ||| |||| ||||| |||     
T  27646937 cccatacctacacggccctaggatccctctcattccgatgtgattcggttcctctagaagctgtcgggagccgcacattggcgtgccttgtgcaccggca 27647036  T
Q  217 atcactcctc-gccctcgtcagccttgggtgttaca 251  Q
    | |||||| | ||||||||||||  |||| ||||||    
T  27647037 accactcccctgccctcgtcagctgtgggcgttaca 27647072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 49 - 253
Target Start/End: Original strand, 42788680 - 42788883
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| | | |||  ||| ||||||||| |||||||| |||    
T  42788680 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttctttcaaccatgtagtcccaatcctacacggcctcaggatccctctca 42788779  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||| ||||||||| ||| | |||||| ||||| ||| |||||| ||| || |||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  42788780 ttccgttgtgattcggttcctctagaagttgtcgagagccgctca-tgttgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgtt 42788878  T
Q  249 acaat 253  Q
    |||||    
T  42788879 acaat 42788883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 17445489 - 17445698
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||| ||| ||||||||| |||||||| |||    
T  17445489 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctca 17445588  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    || || ||||||||| ||| | |||||| ||| ||||| ||||||||| | | |||| ||||| | ||| |||||| || ||| || |||||||||||||    
T  17445589 tttcgatgtgattcggttcctctagaagttgttgggagccgctcattgccatgccttgtgcaccgtcgaccactccccgtccttgttagccttgggtgtt 17445688  T
Q  249 acaatgcctc 258  Q
    ||||| ||||    
T  17445689 acaattcctc 17445698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 18304543 - 18304341
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||| | ||| ||||| | | |||||||| |||| |||| |||||| | |||    
T  18304543 agaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttcatcatccatgtagtcccatacctacacgacctcaggatccttctca 18304444  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||| ||||||| | ||| | |||||||||||||||| |||||||||||||  ||| ||||| |||||||||||| || ||||||||| ||||||||||    
T  18304443 ttccgttgtgatttggttcgtctagaagctgtcgggagccgctcattgtcgtgtcttgtgcaccggcgatcactccccgtcctcgtcagtcttgggtgtt 18304344  T
Q  249 aca 251  Q
    |||    
T  18304343 aca 18304341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 5066894 - 5067128
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||| || |||||||||||||||||||| ||||||| || ||| || |     
T  5066894 tgtggagtttttatgaaatagactaccaaaaagaaaatgcatcttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtc 5066993  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||| ||||||||||||||||| || |||||| ||||||||||||||  | |||||| || || ||| |||||||||| ||  |||  |||| |||||    
T  5066994 tcatacatgcacggcctcgggatctctctcattctggtgtgattcgatttgtctagaagttg-cgagagccgctcattgttgtgtcttgcgcaccggcga 5067092  T
Q  218 tcactcctcgccctcgtcagccttgggtgttacaat 253  Q
     |||||| |  ||||||||||| |||||||||||||    
T  5067093 ccactccccatcctcgtcagccatgggtgttacaat 5067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 15513015 - 15513249
Alignment:
Q  18 tgtggagttcttatgaaat-agactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctt--tccttcaaccatgca 114  Q
    ||||||||||||||| ||| ||| ||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |  ||||||||||||| |    
T  15513015 tgtggagttcttatggaatgaga-taccaaaaagaagatgcatcttgttgatattggtagtaccaa-caattcttataagcatattccttcaaccatgta 15513112  T
Q  115 attccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactgg 214  Q
     | |||||||| ||| ||||   ||||||| |||||||| ||||||||| ||| | || || |||||||||| |||||||| |||| |||| ||||| ||    
T  15513113 gtcccatacctacacagcctaatgatccctctcattccgatgtgattcggttcctctaaaaactgtcgggagccgctcattatcgtgccttgtgcaccgg 15513212  T
Q  215 cgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||| |||||| || |||||||||||||||||||||||    
T  15513213 cgaccactccccgtcctcgtcagccttgggtgttaca 15513249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 189212 - 189067
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  189212 ctgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 189113  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| || |||||||| |||||||| |||||||| ||||||||    
T  189112 cccatacatgtacggcctcaggatccctctcattccgatgtgattc 189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 8642036 - 8642181
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |    
T  8642036 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgcagt 8642135  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||||||||||||||  |||||||| |||||| | ||||||||    
T  8642136 cccatacctgcacggccttaggatccctctcattctgatgtgattc 8642181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 22556648 - 22556535
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||| ||| |||| |||    
T  22556648 agaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctca 22556549  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  22556548 ttccgatgtgattc 22556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 1822049 - 1821937
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |     
T  1822049 tgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtc 1821950  T
Q  118 ccatacctgcacg 130  Q
     ||||||||||||    
T  1821949 tcatacctgcacg 1821937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 3886603 - 3886748
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |    
T  3886603 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcattccttctaccatgcagt 3886702  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| || ||| |||| |||||||| |||||||| ||||||||    
T  3886703 cccatacttgtacgacctcaggatccctctcattccgatgtgattc 3886748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2474103 - 2473958
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |    
T  2474103 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagccttccttcaaccatgcagt 2474004  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      ||| |||| ||| |||  |||||||| |||||||| ||||||||    
T  2474003 ctcatgcctgtacgaccttaggatccctctcattccgatgtgattc 2473958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 3887091 - 3887204
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||| | ||||||||| |||||||| ||||| || |||    
T  3887091 agaagatgcatcttgttgatataggtagtaccaaataattcatataagtcttccttcaaccatgcagtcccatacctgtacggcctcaggatcactctca 3887190  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  3887191 ttccgatgtgattc 3887204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 22557081 - 22556968
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||||||||  || | || |||    
T  22557081 agaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaactctctca 22556982  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  22556981 ttccgatgtgattc 22556968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2474549 - 2474404
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |    
T  2474549 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagtcttccttcaaccatgcagt 2474450  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||| ||| ||| |||  ||||| || |||||||| ||||||||    
T  2474449 cccatatctgtacgaccttaggatctctctcattccgatgtgattc 2474404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 1880220 - 1879990
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||| |||||||| || |||||||||| ||| |||| |||||| ||||| ||||||| |||||   ||||||||||      |||||||||||||||| |    
T  1880220 ctgtagagttcttgtggaatagactaccaaaaagaatatgcat-ttgttaatataggaagtactggacaattcttaac----ttccttcaaccatgcagt 1880126  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      |||| |||||||| |||| ||||||| |||||| ||||||||| | ||  | |||||| ||| ||||||| ||||||||||| |||||||||| ||||    
T  1880125 cacataactgcacggtctcgagatccctctcattctggtgtgatttggtttgtctagaagttgttgggagtcactcattgtcgtgccttatgcaccggcg 1880026  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | | || | || ||||||||||||| ||||||||||    
T  1880025 accgcttcccgtcctcgtcagcctttggtgttacaa 1879990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 4657995 - 4658217
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||| |||||| ||| ||||||||||| |||||| ||||||||||| ||||||| |||||||| | ||| |||||||||| | |    
T  4657995 ctgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataatc-ttcgttcaaccatgaagt 4658093  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      |||||||||||||  ||  ||||||| | ||| || ||||||||  ||    |||| |||||| ||||||| |||||||| | | |||||||||||||    
T  4658094 ctcatacctgcacggtttcaagatccctcttatttcgatgtgattcagtttgcctagaggctgtcaggagtcggtcattgtcatgcattatgcactggcg 4658193  T
Q  217 atcactcctcgccctcgtcagcct 240  Q
    | |||||| || ||| ||||||||    
T  4658194 accactccccgtccttgtcagcct 4658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 18750201 - 18750311
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| ||||  ||||  || |||||||||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||||||| ||||    
T  18750201 tggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatccttccttcaaccatgcagttcc 18750300  T
Q  120 atacctgcacg 130  Q
    | |||||||||    
T  18750301 aaacctgcacg 18750311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 22975076 - 22975157
Alignment:
Q  81 aaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||| |||||||| ||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgtgattc 22975157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 8391327 - 8391469
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || ||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||| |||| | |  |    
T  8391327 tggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaattcttataagtcttccttcaatcatgtagtctc 8391425  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
    || ||| ||||||||| | |||||| |||||||| |||||||||    
T  8391426 atgcctacacggcctcagaatccctctcattccgatgtgattcg 8391469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 16370733 - 16370807
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||| ||| ||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16370733 ctaccaaaaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgca 16370807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 30719839 - 30719953
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||| |||||||||| |||   | |||||| |||||  |||| |||||||| |||    
T  30719839 agaagatgcatcttgtttttataggtagtaccaaacaattcatataagccttccttcaacaatgatgtcccatacttgcacaacctcaggatccctctca 30719938  T
Q  149 ttccggtgtgattcg 163  Q
    ||| | |||||||||    
T  30719939 ttctgatgtgattcg 30719953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 29680109 - 29680220
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||| |||||       ||||||||| |||||||||||||| | |    
T  29680109 ctgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggtattacca-------cttataagccttccttcaaccatgtagt 29680201  T
Q  117 tccatacctgcacggcctc 135  Q
     |||||||| |||||||||    
T  29680202 cccatacctacacggcctc 29680220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 24182279 - 24182341
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 111  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||    
T  24182279 agaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaaccat 24182341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 30684590 - 30684702
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||||||| | |||||||| |||   |||||||| |||||  |||| |||||||  |||    
T  30684590 agaagatgcatcttgtttttatagatagtaccaaacaattcatataagcctcccttcaacaatgatgttccatacttgcacaacctcaggatccccctca 30684689  T
Q  149 ttccggtgtgatt 161  Q
    ||||| |||||||    
T  30684690 ttccgatgtgatt 30684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 4673473 - 4673591
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||  | ||| ||| |||| |||||||||||||||| ||||  ||||||| ||||||||||||  ||||||||| |||| | |    
T  4673473 ctgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataagacttccttcaatcatgtagt 4673572  T
Q  117 tccatacctgcacggcctc 135  Q
    || ||| || |||||||||    
T  4673573 tctatatctacacggcctc 4673591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 11160715 - 11160861
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||| |||||||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||| | |  ||||||| |||| | ||  ||||||| |||    
T  11160715 agaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctctca 11160814  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcatt 195  Q
    ||||| ||  ||||| ||||| || ||  |||||| || ||||||||    
T  11160815 ttccgatgcaattcggttcatctaaaaattgtcggaagccgctcatt 11160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 2058696 - 2058748
Alignment:
Q  55 tgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaa 2058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 42429257 - 42429194
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  42429257 agaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatg 42429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 20858546 - 20858633
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 107  Q
    ||||||||||||| |||   ||||  || |||||| |||||||||||||||||  | ||||||||||||||||||||| || ||||||    
T  20858546 tggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagcctttcttcaa 20858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 39801498 - 39801531
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaac 84  Q
    ||||||||||||||||||||||||||||||||||    
T  39801498 aagatgcatcttgttgatataggtagtaccaaac 39801531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 43356649 - 43356701
Alignment:
Q  44 taaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 96  Q
    |||| ||||||||||| |||||| | ||||| |||||||||||||||||||||    
T  43356649 taaaaagaagatgcatattgttggtttaggttgtaccaaacaattcttataag 43356701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 32574694 - 32574740
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagc 97  Q
    ||||||||| |||||  |||||||||||||||||||||| |||||||    
T  32574694 aagatgcattttgtttgtataggtagtaccaaacaattcctataagc 32574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 11757283 - 11757347
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtacca 81  Q
    |||||||||||||||| | |  |||||  || ||||||||||| ||||||||||| |||||||||    
T  11757283 ctgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatataagtagtacca 11757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 7e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 12691995 - 12692229
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  12691995 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 12692094  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  12692095 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 12692194  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  12692195 accactccccgccctcgtcagccttgggtgttaca 12692229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 1645745 - 1645979
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||| | |    
T  1645745 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttccttcaaccatgtagt 1645844  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||||||  ||| ||| |||||||| ||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  1645845 cccatacctacacggcctcaagattcctctcattccgatgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 1645944  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  1645945 accactccccgccctcgtcagccttgggtgttaca 1645979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 23942785 - 23943016
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  23942785 ctgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgtagt 23942884  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
    ||||||||| ||||||| | |||||||| |||||||| ||||||||| ||| | ||||||||||| |||   |||||||||||| |||| ||||| ||||    
T  23942885 tccatacctacacggccccaggatccctctcattccgatgtgattcggttcctctagaagctgtcagga---gctcattgtcgtgccttgtgcaccggcg 23942981  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||| |||| |||||||||    
T  23942982 accactccccgccctcgtcatccttaggtgttaca 23943016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 4127891 - 4128120
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccata 122  Q
    |||||||||| ||| | ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |  |||     
T  4127891 agttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatatagtctcatg 4127990  T
Q  123 cctgcacggcctcgggatccctatcattccggtgtgattcgattcat-ttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcac 221  Q
    ||| || |||||| |||||||| |||||||| ||||||||||||| | ||||||||||| ||||| ||||||||||||| |||| ||||| ||||| |||    
T  4127991 cctacatggcctcaggatccctctcattccgatgtgattcgattcctcttagaagctgttgggagccgctcattgtcgtgccttgtgcaccggcgaccac 4128090  T
Q  222 tcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||||||||||||||||||||||||||||    
T  4128091 tcctcgccctcgtcagccttgggtgttaca 4128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 4127433 - 4127668
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| | |    
T  4127433 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgtagt 4127532  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcat-ttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggc 215  Q
     |||||||| || |||||| |||||||| |||||||| ||||||||| ||| | ||||||| ||||||||| ||||||||||||| |||| ||||| |||    
T  4127533 cccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctcttagaagttgtcgggagccgctcattgtcgtgccttgtgcaccggc 4127632  T
Q  216 gatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    || |||||| |||||||||||| |||||||||||||    
T  4127633 gaccactccccgccctcgtcagtcttgggtgttaca 4127668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 50398537 - 50398768
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | |     
T  50398537 tggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcct 50398636  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||| ||||||||| |||||||| |||||||| |||||||||  |  | |||||| ||||||||| ||||||||||| | |||| ||||| ||||| |    
T  50398637 atacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgacc 50398736  T
Q  220 actcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| ||||||||||||||||||||||||||    
T  50398737 actccccgccctcgtcagccttgggtgttaca 50398768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 24628973 - 24629208
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctt---tccttcaaccatgc 113  Q
    |||||||||||||||| ||    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||| ||||||||    
T  24628973 ctgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctaattcctttaaccatgc 24629072  T
Q  114 aattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactg 213  Q
    | | |||||||| ||||||||| ||| |||| |||||||||||||||||| ||| |  |||||||||| |||| ||||||||||||| |||| ||||| |    
T  24629073 agtcccatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctcaagaagctgtcaggagccgctcattgtcgtgccttgtgcaccg 24629172  T
Q  214 gcgatcactcctcgccctcgtcagccttgggtgtta 249  Q
    |||| |||||||  ||||||| |||||| |||||||    
T  24629173 gcgaccactcctgtccctcgttagccttaggtgtta 24629208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 24629461 - 24629662
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||| |||| |||| ||| |||| |||    
T  24629461 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaaccatgcagtcccatacctacacgacctcaggaaccctctca 24629560  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | |||||||||||  ||| ||||||||||||| |||| || || ||||| |||||| |  |||||| |||||||||||||    
T  24629561 ttccggtgtgattcggttcctctagaagctgtcaagagccgctcattgtcgtgccttgtgaaccggcgaccactcc-ccacctcgttagccttgggtgtt 24629659  T
Q  249 aca 251  Q
    |||    
T  24629660 aca 24629662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 3169349 - 3169116
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| | | |  ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||| | |     
T  3169349 tgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaaccatgtagtc 3169250  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| |||||||||  ||| ||| |||||||| ||||||||| ||| | || |||||||| ||||||||||||||||||  ||| ||||| || ||    
T  3169249 ccatacctacacggcctcatgattcctctcattccgatgtgattcggttcctctataagctgtcaggagtcgctcattgtcgtgtcttgtgcaccggtga 3169150  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||||| || |||||||| ||||||||||||||    
T  3169149 ccactccccgtcctcgtcaaccttgggtgttaca 3169116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 9423862 - 9424088
Alignment:
Q  25 ttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacc 124  Q
    |||||||| ||| | |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| | ||||||     
T  9423862 ttcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccatgcagtcccataca 9423961  T
Q  125 tgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcc 224  Q
    |||||| |||| |||||||| |||||||||||||||||| ||| | ||||||  |||||||| | ||| ||||||| |||| ||||| | ||| ||||||    
T  9423962 tgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagtcgtcgggagccactctttgtcgtgccttgtgcaccgacgaccactcc 9424061  T
Q  225 tcgccctcgtcagccttgggtgttaca 251  Q
     ||||||||||  |  |||||||||||    
T  9424062 ccgccctcgtcttctgtgggtgttaca 9424088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 50398989 - 50399224
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  50398989 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtaat 50399088  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||| ||| |||||||| |||||||| |||||||||  |  | |||||| |||| | || ||||||||||| | |||| ||||||||||    
T  50399089 ctcatacctacacggtctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcagaagccgctcattgtcatgccttgtgcactggcg 50399188  T
Q  217 atcactcctcgccctcgtcagccttggg-tgttacaa 252  Q
    | |||||| |||||||||||||| |||| ||||||||    
T  50399189 accactcc-cgccctcgtcagccctgggatgttacaa 50399224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 29628664 - 29628899
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| | ||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |    
T  29628664 ctgtggagttcttatggaatgggctaccaaaca-aagacacatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagt 29628762  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||| |||||||| ||||| || ||||||||| ||| | ||||||||||| | || | ||||||| ||| |||| ||||| ||||    
T  29628763 ctcatacctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagctgtcagaagccactcattggcgtgccttgtgcaccggcg 29628862  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaat 253  Q
    | |||||| || ||||||| ||||||| |||||||||    
T  29628863 accactccccgtcctcgtccgccttggatgttacaat 29628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 14351939 - 14351705
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||||  ||| ||| |||||||||||||||||||||||| |||||||||| || ||||| |||| ||||||||||||||||      
T  14351939 ctgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagccttccttcaaccatgcaga 14351840  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||| |||||| |||| |||||||| |||||| ||||||||||| ||  | |||||| ||||||||| ||||||||||||| |||| ||||| |||     
T  14351839 ctcatacatgcacgacctcaggatccctctcattctggtgtgattcggtttgtctagaagttgtcgggagccgctcattgtcgtgccttgtgcaccggca 14351740  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||||||    |||  ||||||||||||||||||    
T  14351739 accactccctagccttatcagccttgggtgttaca 14351705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 21067875 - 21067648
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||| |||||| |||   || ||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |    
T  21067875 ctgtgaagttcttatggaatggactaccaaa---aaaatgtatcttgttgatataggtagcaccaaacaattcttataagtcttccttcaaccatgcagt 21067779  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||||||||   |  ||||| ||||||||||| ||| | || ||  ||||||||| ||||||||||||| |||| ||||| ||||    
T  21067778 cccatacctgcacggcctcgggat---ttccattctggtgtgattcggttcgtctataatttgtcgggagccgctcattgtcgtgccttctgcaccggcg 21067682  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||| |||  |||||||||||||    
T  21067681 accactccccgccctcatca-acttgggtgttaca 21067648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 21220359 - 21220521
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  | || ||||||| || ||||||  ||||||| |||    
T  21220359 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaaccatatagtttcatacctacatggcctcatgatccctctca 21220458  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcac 211  Q
    ||| | ||||||||| ||| | ||||||||| |||||| ||||||||||||| |||| |||||    
T  21220459 ttctgatgtgattcggttcctctagaagctgccgggagccgctcattgtcgtgccttgtgcac 21220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 53996111 - 53996345
Alignment:
Q  17 ctgtggagttcttatgaaat-agactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaa 115  Q
    |||||||||||||||| ||| ||| ||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |     
T  53996111 ctgtggagttcttatggaatgaga-taccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagcattccttcaaccatgtag 53996209  T
Q  116 ttccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggc 215  Q
    | ||||| || ||  ||||| |||||| | |||||||| ||||||||| ||| | || ||| ||| ||||| ||||||||||||| |||| ||||| |||    
T  53996210 tcccatatctacatagcctcaggatccttctcattccgatgtgattcggttcctctaaaagttgttgggagccgctcattgtcgtgccttgtgcaccggc 53996309  T
Q  216 gatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    || ||||| |  || |||||||||||  ||||||||    
T  53996310 gaccactcttgtccgtcgtcagccttccgtgttaca 53996345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 49 - 223
Target Start/End: Complemental strand, 21067394 - 21067220
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||| ||  |||||||||||||||| |  ||||| |||||| ||||||||||||| |||    
T  21067394 agaagatgcatcttgttgatatatgtagtaccaaataattattattagtcttccttcaaccatgcagtctcatacatgcacgacctcgggatccctctca 21067295  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactc 223  Q
    ||||||||||||||||||| | || ||| ||||||||| |||||||| |||| |||| ||||  ||||| |||||    
T  21067294 ttccggtgtgattcgattcgtctataagttgtcgggagccgctcattatcgtgccttgtgcatcggcgaccactc 21067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 51331277 - 51331509
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | |    
T  51331277 ctgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagccttccttcaaccatgtagt 51331376  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||||||  ||| ||| |||||||| |||||||||  |  | |||||| | | ||||  |||||||| || | |||| ||||| | |     
T  51331377 cccatacctacacggcctcatgattcctctcattccgatgtgattcggcttgtctagaagttatagggaaccgctcattatcatgccttgtgcaccgaca 51331476  T
Q  217 atcactcctcgccctcgtcagccttgggtgtta 249  Q
    | |||||| ||||||| ||||||||||||||||    
T  51331477 accactccccgccctcatcagccttgggtgtta 51331509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 31817854 - 31818083
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccata 122  Q
    |||||||||||||| ||||||  || |||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| | |||||    
T  31817854 agttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaaccatgcagtcccata 31817953  T
Q  123 cctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcact 222  Q
    | |||| | ||||   |||||| | |||||| |||||||||||||    ||||||| ||||||  || | |||||| | |||| ||||  ||||||||||    
T  31817954 catgcatgacctcataatccctcttattccgatgtgattcgattcgaccagaagctttcgggatccgtttattgtcatgccttgtgcatcggcgatcact 31818053  T
Q  223 cctcgccctcgtcagccttgggtgttacaa 252  Q
    || | || ||||||  || |||||||||||    
T  31818054 ccccaccatcgtcaatctcgggtgttacaa 31818083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 14572178 - 14572291
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | | |||||||| || |||||| |||||||| |||    
T  14572178 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctca 14572277  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  14572278 ttccgatgtgattc 14572291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 23943238 - 23943464
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| ||||||||||||||||||||||||||||||||||| | || |||||||  ||||||||||||||   |    
T  23943238 ctgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataagtcttccttcaaccatg---t 23943334  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||| ||||| ||||||||||||||  | ||||||||| ||| | |||||||||||  ||| ||||||||||||| ||| || ||| ||||    
T  23943335 gacatacctacac-gcctcaggatccctatcattttgatgtgattcggttcctctagaagctgtcaagagccgctcattgtcgtgcctcatacaccggcg 23943433  T
Q  217 atcactcctcgccctcgtcagccttgggtgt 247  Q
    | |||||  || |||||||| |||| |||||    
T  23943434 accactctccgtcctcgtcatccttaggtgt 23943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 49998780 - 49998636
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  49998780 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagt 49998681  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
     |||| ||| ||| ||||  |||||||| |||||||| |||||||    
T  49998680 cccatgcctacacagccttaggatccctctcattccgatgtgatt 49998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 8467828 - 8468029
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| | |  ||||||||||| | ||| |||||||| |||    
T  8467828 agaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatccctttca 8467927  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||| | |||| |||| ||    ||||||||| | |||| ||| || |||| | |||| ||||||||||| |||||| ||||||||||| ||| ||| |||    
T  8467928 ttctgatgtggttcggtt-gcctagaagctgccaggagccgcgcaatgtcatgccttgtgcactggcgaccactccccgccctcgtcaacctcgggcgtt 8468026  T
Q  249 aca 251  Q
    |||    
T  8468027 aca 8468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 14571717 - 14571850
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||   ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |    
T  14571717 ctgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagt 14571816  T
Q  117 tccatacctgcacggcctcgggatccctatcatt 150  Q
     |||||||| ||||| |||  ||||||| |||||    
T  14571817 cccatacctacacggactcaagatccctttcatt 14571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 23350311 - 23350424
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | || |||||| ||||||||  |||| || |||    
T  23350311 agaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaaccatgcagtcccctacctgtacggcctcaagatctctctca 23350410  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  23350411 ttccgatgtgattc 23350424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 35871771 - 35871627
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| | |    
T  35871771 ctgtggagttcttatggaatgagctaccgaaaagaa-atgcatcttgttgatataggtggtaccaaacaattcatataagccttccttcaaccatgaagt 35871673  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||| |||||||| |||||||| |||||||| ||||||||    
T  35871672 cccatacctgtacggcctcaggatccctctcattccgatgtgattc 35871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 44471321 - 44471466
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |    
T  44471321 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagt 44471420  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      |||||||| ||||||||  |||| || |||||||| ||||||||    
T  44471421 ctcatacctgtacggcctcaagatctctctcattccgatgtgattc 44471466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 1464290 - 1464057
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||| ||||||||||||||   ||||  || |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |     
T  1464290 tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttctttcaactatgtattc 1464191  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||| ||||| | |  ||||||| |||||| | ||||||||| ||| | || ||| |||||  || || |||||||| |  ||||||||| |||||    
T  1464190 tcatacctacacggtcgcatgatccctctcattctgatgtgattcggttcgtctaaaaggtgtcgaaagccgttcattgtcatgtcttatgcaccggcga 1464091  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||||  || | |||| || |||||||||||||    
T  1464090 ccactctccgtcttcgttagtcttgggtgttaca 1464057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 7678618 - 7678713
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| ||||  ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  7678618 ctgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatg 7678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 17628623 - 17628531
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatc 141  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| |||  | || ||||| ||||||||||||    
T  17628623 agaagatgcatcttgttggtataggtagtaccaaacaattcttataagcctaccttcaaccatgaaatcacttatctgcatggcctcgggatc 17628531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 43928961 - 43929052
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaacca 110  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| ||||    
T  43928961 tgtggatttcttatgaaata-actaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgacca 43929052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 27029421 - 27029188
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | ||||  || ||||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||| | || | |    
T  27029421 ctgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataagtcttccttcaatcgtgtagt 27029322  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||| |||||| || | | | |||||| |||||| | ||| ||||| ||    || |||||  | | || ||||||||||| ||| || |||| |||||    
T  27029321 ctcattcctgcatggtc-ccgaatccctctcattctgatgtaattcggttttcctataagctaccagaagccgctcattgtcatacattgtgcattggcg 27029223  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||| ||||||||||    
T  27029222 accactccccgccctcgtcagcctcgggtgttaca 27029188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 44470902 - 44470964
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  44470902 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaaccat 44470964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 53854858 - 53855008
Alignment:
Q  72 ggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcattt 171  Q
    |||||||||||||||||||||||||  |||||||||||||  | |  ||||||| ||| || ||  ||||||| |||||||| ||||||||| ||| | |    
T  53854858 ggtagtaccaaacaattcttataagtcttccttcaaccatatagtctcatacctacactgcttcatgatccctctcattccgatgtgattcggttcgtct 53854957  T
Q  172 agaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcact 222  Q
    | ||||||||||||| ||||||||||||  |||| | ||||||| ||||||    
T  53854958 ataagctgtcgggagccgctcattgtcgagccttgtacactggcaatcact 53855008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 51 - 251
Target Start/End: Complemental strand, 27026613 - 27026414
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | || | | |||||||||||| | | |   |||||| |||||    
T  27026613 aagatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaatcgtgtagtcccatacctgcaccgtc-caatatccctctcatt 27026515  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttac 250  Q
    | | ||||||||| ||    || |||||  | |||||||||||||||| | |||| ||||| | ||| |||||| ||  ||||||||||| ||| |||||    
T  27026514 ctgatgtgattcggtttgcctaaaagctaccaggagtcgctcattgtcatgccttgtgcaccgacgaccactccccgttctcgtcagcctcgggcgttac 27026415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 240
Target Start/End: Original strand, 31817426 - 31817617
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||| | |||||||||||||| | |  ||||| |||||| ||||  ||||||| | |    
T  31817426 agaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttcaaccatgaagtctcatacatgcacgacctcatgatccctctta 31817525  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagcct 240  Q
    || || ||||||||   |  | || ||  ||||||||  ||||||||||| | |||| |||||||| || |||||| || ||||||||||||    
T  31817526 tttcgatgtgattctccttgtctaaaaattgtcgggaaccgctcattgtcatgccttgtgcactggtgaccactccccggcctcgtcagcct 31817617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 13266196 - 13266115
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggc 132  Q
    |||||||||||| |||||||||| ||||| ||| |||| |||||||| |||||||||||||||| | |||||||||||||||    
T  13266196 aagatgcatcttattgatatagggagtactaaaaaattattataagccttccttcaaccatgcattcccatacctgcacggc 13266115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 50814821 - 50814899
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 95  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50814821 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 17029474 - 17029329
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||||   ||| |||   || |||||||||||||||||||||||||| |||||||| ||| |||  ||| |||||| ||||| |    
T  17029474 ctgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaattattacaagtcttcattcaactatgcagt 17029375  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| |||||| ||||  ||||||| |||||||| ||| ||||    
T  17029374 cccatacttgcacgacctctagatccctctcattccgatgtaattc 17029329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 41870030 - 41869918
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||  ||||||||| |||||| | |||||  || || | ||| |||||||| |||    
T  41870030 agaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctctca 41869931  T
Q  149 ttccggtgtgatt 161  Q
     |||| |||||||    
T  41869930 ctccgatgtgatt 41869918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 52048663 - 52048798
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| ||||   |||  ||||||||||||||||  |||| |||||| ||||||||||||||||  ||||||||| | ||||| |    
T  52048663 ctgtggagttcttatggaat-gacttacaaaatgaagatgcatcttgttagtatacgtagtatcaaacaattcttataaattttccttcagctatgcagt 52048761  T
Q  117 tccatacctgcacggcctcgggatccctatcattccg 153  Q
    | |||||||| |||||||  ||| |||| ||||||||    
T  52048762 ttcatacctgtacggccttaggaaccctctcattccg 52048798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 17028984 - 17028873
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||| ||||||||||||||||||||| ||| ||||||||||| ||    ||||||||| ||||| | |||||| |||| ||| || |||||||| |||||    
T  17028984 aagacgcatcttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcatt 17028885  T
Q  151 ccggtgtgattc 162  Q
    ||| ||||||||    
T  17028884 ccgatgtgattc 17028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 13613925 - 13614039
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |||||| | |  ||| | |||||  |||| |||||||| |||    
T  13613925 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttctaccatggagtctcatgcatgcacaacctctggatccctctca 13614024  T
Q  149 ttccggtgtgattcg 163  Q
    ||||  |||||||||    
T  13614025 ttccattgtgattcg 13614039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 20306191 - 20306237
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagc 97  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20306191 aagatgcatcttgttgatatagatagtaccaaacaattcttataagc 20306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 23976247 - 23976312
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||   ||||||||| ||||||    
T  23976247 agaagatgcatcttgttagtataggtagtaccaaacaattcttataactcttccttcaatcatgca 23976312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 17629086 - 17628986
Alignment:
Q  43 ctaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatcc 142  Q
    ||||| |||||| ||||||| ||  ||||||||||||||||||||||||||||| |||  ||||||||| || |  |||||||||||| |||  ||||||    
T  17629086 ctaaaaagaagaggcatcttattagtataggtagtaccaaacaattcttataagtttttattcaaccatacattcacatacctgcacgaccttaggatcc 17628987  T
Q  143 c 143  Q
    |    
T  17628986 c 17628986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 4186311 - 4186224
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctt 104  Q
    ||||| |||||||||| ||| | |||| ||| |||||||| |||||||| || ||||||||||||||  |||||||||||| ||||||    
T  4186311 ctgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaatcattcttataagcattcctt 4186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 44831141 - 44831046
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    ||||| ||||| |||||||| | ||||  || |||| || |||||||||  | ||||||||||||||||||| |||||||||| ||||||||||||    
T  44831141 ctgtgaagttcatatgaaatgggctaccgaaaagaatatacatcttgttagtttaggtagtaccaaacaatttttataagcttcccttcaaccatg 44831046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 27578485 - 27578531
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataa 95  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||    
T  27578485 agaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 33765003 - 33764929
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattctta 92  Q
    |||| ||||||||| ||||   |||| ||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  33765003 tgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 15306087 - 15306227
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaa------caattcttataagctttccttcaacca 110  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||| |||||||||||||||||      ||| |||||||||  ||| ||| ||||    
T  15306087 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaaattgctcaaatcttataagtcttctttcgacca 15306186  T
Q  111 tgcaattccatacctgcacggcctcgggatccctatcattc 151  Q
    || | | |||||||| ||| ||||| |||||||| ||||||    
T  15306187 tgtagtcccatacctacacagcctcaggatccctctcattc 15306227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 4185836 - 4185741
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctc 135  Q
    |||| ||| |||||||||||||||||| |||| || ||| ||||||||||||||| |  |||||| ||||||||  |  |||||||||| ||||||    
T  4185836 ctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatatgtattcctttaaccatgccgtctcatacctgcatggcctc 4185741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 42838733 - 42838690
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttata 94  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  42838733 aagatgcattttgttgatataggtagtaccaaacaatttttata 42838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 23091539 - 23091584
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttata 94  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  23091539 agaagatgcatcttgttaatatatgtagtaccaaacaatttttata 23091584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 39902481 - 39902518
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaa 86  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39902481 agaagatgcatcttgttgatatagatagtaccaaacaa 39902518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 34554567 - 34554483
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 107  Q
    |||||||||| ||| | |||| ||| | || |||||||||| || ||||||||||  |||||||||||||||||| ||| |||||    
T  34554567 agttcttatggaatggtctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagcattctttcaa 34554483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 53391990 - 53391934
Alignment:
Q  58 atcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    ||||||||||||||| | ||| ||||||||| |||||||| || |||||||||||||    
T  53391990 atcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgca 53391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 27578952 - 27578984
Alignment:
Q  64 ttgatataggtagtaccaaacaattcttataag 96  Q
    |||||||| ||||||||||||||||||||||||    
T  27578952 ttgatatatgtagtaccaaacaattcttataag 27578984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 153
Target Start/End: Complemental strand, 45682315 - 45682211
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||| ||||||||||||| ||||| || ||||||| ||||||||||| | ||| ||||| |||| | | |||||  |||| ||||||  |||| || |||    
T  45682315 agaaaatgcatcttgttggtatagataataccaaataattcttataaaccttcattcaatcatgtagtcccatatatgcatggcctcaagatctctctca 45682216  T
Q  149 ttccg 153  Q
    |||||    
T  45682215 ttccg 45682211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 7e-75; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20054082 - 20054316
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20054082 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20054181  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20054182 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20054281  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20054282 accactccccgccctcgtcagccttgggtgttaca 20054316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20054538 - 20054772
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20054538 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20054637  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20054638 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20054737  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20054738 accactccccgccctcgtcagccttgggtgttaca 20054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20054994 - 20055228
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20054994 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20055093  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20055094 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20055193  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20055194 accactccccgccctcgtcagccttgggtgttaca 20055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20055450 - 20055684
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20055450 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20055549  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20055550 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20055649  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20055650 accactccccgccctcgtcagccttgggtgttaca 20055684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20055906 - 20056140
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20055906 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20056005  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20056006 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20056105  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20056106 accactccccgccctcgtcagccttgggtgttaca 20056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20056362 - 20056596
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20056362 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20056461  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20056462 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20056561  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20056562 accactccccgccctcgtcagccttgggtgttaca 20056596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20057265 - 20057499
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20057265 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 20057364  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20057365 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20057464  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20057465 accactccccgccctcgtcagccttgggtgttaca 20057499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 16451935 - 16452170
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||  |||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |    
T  16451935 ctgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaaccatgtagt 16452034  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     || ||||| || |||||| |||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  16452035 cccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 16452134  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | |||||| |||||||||||||||||||||||||||    
T  16452135 accactccccgccctcgtcagccttgggtgttacaa 16452170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 16461088 - 16461323
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||  |||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |    
T  16461088 ctgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaaccatgtagt 16461187  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     || ||||| || |||||| |||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  16461188 cccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 16461287  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | |||||| |||||||||||||||||||||||||||    
T  16461288 accactccccgccctcgtcagccttgggtgttacaa 16461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20845663 - 20845897
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  20845663 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagccttccttcaaccatgcagt 20845762  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||||||||||||| ||| || | |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20845763 ctcatacctgcacggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20845862  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| || |||||||||||||||||||||||    
T  20845863 accactccccgtcctcgtcagccttgggtgttaca 20845897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20057721 - 20057955
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |    
T  20057721 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgcagt 20057820  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| ||||| |||||||||||  ||| | ||||||||||  |||| ||||||||||||| |||| ||||| ||||    
T  20057821 cccatacctgcacggcctcaggaaccctctcatttcggtgtgattcagttcctctagaagctgttaggagccgctcattgtcgtgccttgtgcaccggcg 20057920  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||| ||||||||||||||    
T  20057921 accactccccgccctcgtcaaccttgggtgttaca 20057955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 38341017 - 38340816
Alignment:
Q  50 gaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||| || | ||||    
T  38341017 gaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctcat 38340918  T
Q  150 tccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtta 249  Q
    |||||||||||||| ||| | ||||||||||| | || ||||||||||||| |||| ||||| || || |||||| | ||||||||||||||||||||||    
T  38340917 tccggtgtgattcggttcctctagaagctgtcagtagccgctcattgtcgtgccttgtgcaccggtgaccactccccaccctcgtcagccttgggtgtta 38340818  T
Q  250 ca 251  Q
    ||    
T  38340817 ca 38340816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 52250350 - 52250116
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| | |    
T  52250350 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcgaccatgtagt 52250251  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || ||||||  ||||||| |||||||||||||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  52250250 cccatacctacaaggcctcatgatccctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 52250151  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | | |||| |||||||||||||||||||| |||||    
T  52250150 accgctccccgccctcgtcagccttgggtattaca 52250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 43057525 - 43057759
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | ||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  43057525 ctgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgtagt 43057624  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||| |||||||| |||||||| ||||||||| ||| | || ||||||||||||| ||||||||| | | |||| ||||| ||||    
T  43057625 ctcatacctacacggcctcaggatccctctcattccgatgtgattcggttcctctaaaagctgtcgggagccgctcattggcatgccttgtgcaccggcg 43057724  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | || ||| ||||||| ||||||||||||||||||    
T  43057725 accattccccgccctcttcagccttgggtgttaca 43057759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 12883668 - 12883438
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||| ||||| |||   |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |    
T  12883668 ctgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttcaatcatgcagt 12883569  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||| |||||||||||| | |||||||||||||||||| ||| | |||||||||||| ||| ||||||||||||| |||| ||||| | ||    
T  12883568 cccatacctgcacagcctcgggatccatctcattccggtgtgattcggttcgtctagaagctgtcgagagccgctcattgtcgtgccttgtgcaccgacg 12883469  T
Q  217 atcactcctcgccctcgtcagccttgggtgt 247  Q
    | |||||  | ||||||| ||||||| ||||    
T  12883468 accactcaccaccctcgttagccttgagtgt 12883438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 51372876 - 51373110
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || | |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| || |    
T  51372876 ctgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagccttccttcaaccatacagt 51372975  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      |||||||| | ||||||||||||||| ||||||  |||||||| | | | | |||||| ||||||||||||||||||||||| ||||||||||||||     
T  51372976 cacatacctgtatggcctcgggatccctctcattctagtgtgatttggtacgtctagaagatgtcgggagtcgctcattgtcgtgccttatgcactggca 51373075  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||||| ||| ||||||||| |||||||||||||    
T  51373076 accactcttcgtcctcgtcagtcttgggtgttaca 51373110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 20056818 - 20057043
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |    
T  20056818 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagccttccttcaaccctgcagt 20056917  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||         | ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  20056918 cccatacct---------caggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 20057008  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  20057009 accactccccgccctcgtcagccttgggtgttaca 20057043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 43057067 - 43057300
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | ||||  || |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| | |    
T  43057067 ctgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaaccatgtagt 43057166  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||  |||||||  |||||| | ||||||||| ||| | |||||  ||||||||||||||||||||| | |||| ||||| |||     
T  43057167 cacatacctacacggccttaggatccc-ctcattctgatgtgattcggttcctctagaaattgtcgggagtcgctcattgtcatgccttgtgcaccggca 43057265  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| || |||||||||||||||||||||||    
T  43057266 accactccccgtcctcgtcagccttgggtgttaca 43057300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 30872953 - 30873188
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||  ||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||| || |     
T  30872953 tgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaaccatacagtc 30873052  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||||||||||||| | |||||| |||||||||||||||||| ||| | |||||  |||| | || ||||||||||||| |||| ||||| | |||    
T  30873053 tcatacctgcacggcctcagaatccctctcattccggtgtgattcggttcgtctagaaattgtc-gaagccgctcattgtcgtgccttgtgcaccgacga 30873151  T
Q  218 tcactc--ctcgccctcgtcagccttgggtgttacaa 252  Q
     |||||  | |||||||||||||||||| ||||||||    
T  30873152 ccactccacgcgccctcgtcagccttggatgttacaa 30873188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 35759642 - 35759755
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| |||    
T  35759642 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggatccctctca 35759741  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  35759742 ttccgatgtgattc 35759755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 35760939 - 35761061
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcggga 139  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||    
T  35760939 ctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtctcatacctgcacggcctcagga 35761038  T
Q  140 tccctatcattccggtgtgattc 162  Q
    ||||| |||||||| ||||||||    
T  35761039 tccctctcattccgatgtgattc 35761061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 20061193 - 20061338
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20061193 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagt 20061292  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||||||| |||| |||||||| |||||| | ||||||||    
T  20061293 cccatacctgcacgacctcaggatccctctcattctgatgtgattc 20061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 50002741 - 50002890
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||| ||||||||| ||||| || |||    
T  50002741 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggatctctctca 50002840  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtc 198  Q
    ||||| |||||||||  || | |||||| ||||||||| |||||||||||    
T  50002841 ttccgatgtgattcggctcctctagaagatgtcgggagccgctcattgtc 50002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 40 - 251
Target Start/End: Original strand, 50003100 - 50003311
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcggga 139  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||| |||||||  | |||| ||||||||| | | ||||||||| |||||| |||    
T  50003100 ctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataagtctccctttaaccatgcagtcctatacctgcatggcctcagga 50003199  T
Q  140 tccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagcc 239  Q
    ||||| |||||||| ||||||||| ||| |||||||||||||||||| ||| |||| || | |||| ||||| | ||| |||||   |||||||||||||    
T  50003200 tccctctcattccgatgtgattcggttcctttagaagctgtcgggagccgcacattatcatgccttttgcaccgacgaccactctctgccctcgtcagcc 50003299  T
Q  240 ttgggtgttaca 251  Q
    || ||| |||||    
T  50003300 ttaggtattaca 50003311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 2328459 - 2328341
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  2328459 ctgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 2328360  T
Q  117 tccatacctgcacggcctc 135  Q
     ||||||||| ||||||||    
T  2328359 cccatacctgtacggcctc 2328341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 31822697 - 31822899
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||   |||||||||||||| | |  ||||||| |||||||||  ||||||| |||    
T  31822697 agaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcatgatccctctca 31822796  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||| | ||||||| | ||  | |||||||||| ||||| |||||||| |||| |||| |||||  |||| | ||||||||| ||||||||| ||||||||    
T  31822797 ttctgatgtgatttggttgctctagaagctgttgggagccgctcattatcgtgccttctgcaccagcgaccgctcctcgccatcgtcagccgtgggtgtt 31822896  T
Q  249 aca 251  Q
    |||    
T  31822897 aca 31822899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 50002287 - 50002433
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |    
T  50002287 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgtagt 50002386  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
     |||| ||| |||||||||  ||||||| |||||||| |||||||||    
T  50002387 cccatgcctacacggcctcatgatccctctcattccgatgtgattcg 50002433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 2635036 - 2634919
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||| | ||||||||||||  ||||  ||||||| |||    
T  2635036 agaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttcaaccatgcagtcccatacctgcacaacctcatgatccctctca 2634937  T
Q  149 ttccggtgtgattcgatt 166  Q
    ||||| ||||||||||||    
T  2634936 ttccgatgtgattcgatt 2634919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 46693737 - 46693883
Alignment:
Q  17 ctgtggagttcttatgaaat-agactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat-gca 114  Q
    |||||||||| ||||||||| ||| |||  || |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||    
T  46693737 ctgtggagttattatgaaatgaga-taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagccttccttcaaccatcaca 46693835  T
Q  115 attccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     | |||||| |||||| |||  |||||||| |||||||| ||||||||    
T  46693836 gtcccatacatgcacgaccttaggatccctctcattccgatgtgattc 46693883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 7548234 - 7548003
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||||||||||||| |||| | |||| ||| |||| ||||||||||||||||||| || |||||||||||| |||||||  |||||| || |||| | |     
T  7548234 tgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaatcatgtagtc 7548135  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||| |||||||||  ||||||| ||||| |  ||||||||  ||  | | |||| |||| |||| || |||||||||| |||| ||||| || ||    
T  7548134 tcatacctacacggcctcatgatccctctcattgcaatgtgattcagtt--tgtcgaagttgtcaggagccgttcattgtcgtgccttgtgcaccggtga 7548037  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||| || |||||||||||| | |||||||||||    
T  7548036 tcaccccccgccctcgtcagtcctgggtgttaca 7548003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 252
Target Start/End: Complemental strand, 10820702 - 10820501
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||   |||||||||||||| | | | |||| | ||| |||||   |||||| ||| |    
T  10820702 aagatgtatcttattgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcact 10820603  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttac 250  Q
    ||| ||||||||| ||||| |||||| |||||| || || |||||||| | | || ||||| ||||| |||| | |  |||||||||||||||||| |||    
T  10820602 ccgatgtgattcggttcatctagaagttgtcggtagccgttcattgtcatgctttgtgcaccggcgaccacttcccatcctcgtcagccttgggtggtac 10820503  T
Q  251 aa 252  Q
    ||    
T  10820502 aa 10820501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 16907375 - 16907266
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    |||||||||| |  ||| ||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |    
T  16907375 tggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgcagtttc 16907276  T
Q  120 atacctgcac 129  Q
    ||||||||||    
T  16907275 atacctgcac 16907266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 20060342 - 20060431
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttca 106  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20060342 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttca 20060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 23180842 - 23180729
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||||| | | | |||| ||| |||||| ||  ||||||| |||    
T  23180842 agaagatacatcttgttgatataggtagtaccaagcaattcttataatcattccttcaaccacgtagtcccattcctacacggcttcaagatccctctca 23180743  T
Q  149 ttccggtgtgattc 162  Q
    ||||  ||||||||    
T  23180742 ttccaatgtgattc 23180729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 12728136 - 12728040
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagta-ccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||||    
T  12728136 ctgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataagtcttccttcaaccatg 12728040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 16410742 - 16410831
Alignment:
Q  34 aatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatac 123  Q
    ||||| |||| ||| | |||||||||||||||| ||| |||||||  ||| |||||||||||||||||||||||| ||||| | ||||||    
T  16410742 aataggctaccaaaaacaagatgcatcttgttggtattggtagtagtaaataattcttataagctttccttcaacaatgcattcccatac 16410831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 46411173 - 46411248
Alignment:
Q  54 atgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcac 129  Q
    ||||||||| |||||||||||||||||||| |||||||| ||  ||| |||||||| ||||||| ||||| |||||    
T  46411173 atgcatcttattgatataggtagtaccaaataattcttaaaaatttttcttcaaccgtgcaatttcatacatgcac 46411248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2739660 - 2739578
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataag-ctttcctt 104  Q
    |||||||||| |||||||||  ||| ||||||| ||| ||||||||||| ||||| | |||||||||||||||| ||||||||    
T  2739660 agttcttatggaatagactataaaaaagaagatacatattgttgatatatgtagtgctaaacaattcttataagtctttcctt 2739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 2634604 - 2634511
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||  |||||||||   || |||||||||||||||||  ||||| ||||||||||||||||||  |||| |||||| || ||||||||    
T  2634604 agttcttattgaatagactatcgaaaagaagatgcatcttgtttgtatagctagtaccaaacaattcttgcaagccttcctttaatcatgcaat 2634511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 16440604 - 16440676
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||| ||| |||| ||||||||||||| ||| ||||||| |||||| ||||||||||  || |||||||||||    
T  16440604 ctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataagtctttcttcaaccatg 16440676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 31823109 - 31823161
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattctta 92  Q
    |||| ||| ||||||||||| || |||||||||||||||||||| ||||||||    
T  31823109 ctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 9189384 - 9189351
Alignment:
Q  219 cactcctcgccctcgtcagccttgggtgttacaa 252  Q
    |||||| |||||||||||||||||||||||||||    
T  9189384 cactccccgccctcgtcagccttgggtgttacaa 9189351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 25337999 - 25338234
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   |||   || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |    
T  25337999 ctgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgcagt 25338098  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||||| |||| ||| |||| |||||||||||||||||  ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  25338099 cccatacctgcacgacctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 25338198  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | ||||||||||||||||||||||||||||||||||    
T  25338199 accactcctcgccctcgtcagccttgggtgttacaa 25338234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 33175102 - 33174868
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |    
T  33175102 ctgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagt 33175003  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| ||||||||| |||||||| |||||||| |||||||||  |  | |||||| ||||||||| | ||||||||| | |||| ||||| ||||    
T  33175002 cccatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcgggagccactcattgtcatgccttgtgcaccggcg 33174903  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  33174902 accactccccgccctcgtcagccttgggtgttaca 33174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 25434058 - 25434293
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| | | || |||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||| | |    
T  25434058 ctgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaaccatgaagt 25434157  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||| |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  25434158 cccataccagcacggcctcaggatccctctcattccggtgtgattcggttcgtttagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 25434257  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
      |||||| ||||||||||||||||| |||||||||    
T  25434258 gccactccccgccctcgtcagccttgtgtgttacaa 25434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 29804826 - 29804591
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| | |    
T  29804826 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctgccttcaaccatgtagt 29804727  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||| |||||||| |||||||| ||||||||||||| | |||||||||||||||| |||||||| |||| |||| ||||| ||||    
T  29804726 cccatacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattatcgtgccttgtgcaccggcg 29804627  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | |||||| || ||||||||||||||||||||||||    
T  29804626 accactccccgtcctcgtcagccttgggtgttacaa 29804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 41754433 - 41754199
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  41754433 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagccttccttcaaccatgcagt 41754334  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      |||||||||||||||||  || |||| |||||||||||||||||  ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  41754333 ctcatacctgcacggcctcaagaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 41754234  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||| ||||||||||||||    
T  41754233 accactccccgccctcgtcatccttgggtgttaca 41754199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 8256670 - 8256436
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  8256670 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 8256571  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || ||| ||  ||||||| ||||||||| |||||| ||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  8256570 cccatacctacaaggcttcaagatccctctcattccggcgtgatttgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 8256471  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |  ||||| | ||||||||||||||||||||||||    
T  8256470 actactccccaccctcgtcagccttgggtgttaca 8256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 18098883 - 18099116
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |  |    
T  18098883 tggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgtagtctc 18098982  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||| ||||||||| |||| ||| |||||||| ||||||||| ||| | || |||||||||||||  |||||||||||| |||| ||||| |||||||    
T  18098983 atacctacacggcctcaggattcctctcattccgatgtgattcggttcctctataagctgtcgggagctgctcattgtcgtgccttgtgcaccggcgatc 18099082  T
Q  220 actcctc-gccctcgtcagccttgggtgttacaa 252  Q
    ||||| | ||||||||||||| ||||||||||||    
T  18099083 actcccctgccctcgtcagccgtgggtgttacaa 18099116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 16379537 - 16379302
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| |    
T  16379537 ctgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttcaaccatgcagt 16379438  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||||||||||||||||||| |||||||  | ||||||| ||| |||| || |||| |||||  |||||||||||| |||| ||||| ||||    
T  16379437 cccatacctgcacggcctcgggatccctctcattccaatttgattcggttcgtttataaactgttgggagctgctcattgtcgtgccttgtgcaccggcg 16379338  T
Q  217 atcact-cctcgccctcgtcagccttgggtgttaca 251  Q
    | |||| ||| || |||||||||| |||||||||||    
T  16379337 accactcccttgctctcgtcagccgtgggtgttaca 16379302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 27882929 - 27883162
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| ||  | |||| ||| |||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||| ||||| |     
T  27882929 tgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttcaacaatgcagtc 27883028  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||| ||||||||||| |||||||| ||||| |||||||||||| | | | ||||| ||| |||||| ||||||||||||| |||| ||||| |||||    
T  27883029 tcatacatgcacggcctcaggatccctctcatttcggtgtgattcggtacgtgtagaatctgacgggagccgctcattgtcgtgccttgtgcaccggcga 27883128  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
     |||||| || ||||||||||||||| |||||||    
T  27883129 ccactccccgtcctcgtcagccttggatgttaca 27883162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 33771145 - 33770920
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |    
T  33771145 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctttcttcaaccctgcagt 33771046  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||         |||| ||| |||| |||||||||||||||||  ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  33771045 cccata---------cctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 33770955  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  33770954 accactccccgccctcgtcagccttgggtgttaca 33770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 49 - 254
Target Start/End: Complemental strand, 15620010 - 15619805
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |  ||||| |||||||| ||||||||||| |||    
T  15620010 agaagatgtatcttgttgatataggtagtaccaaacaattcttataagcttgccttcaactatgcagtctcatacttgcacggcatcgggatccctctca 15619911  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||| | ||| ||||| ||| | || ||||| ||||||| ||||||||||||| |||| ||||| ||||| |||||| ||| ||| |||| ||||||||||    
T  15619910 ttctgatgtaattcggttcgtctataagctatcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgctctcatcagtcttgggtgtt 15619811  T
Q  249 acaatg 254  Q
    ||||||    
T  15619810 acaatg 15619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 1707185 - 1706955
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||| || | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| | |    
T  1707185 ctgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaatcatgtagt 1707086  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||| | ||| |||| ||| |||||||| ||||||||| ||| | |||||  ||||||||| ||||||||||||| |||| ||||| | ||    
T  1707085 ctcatacctacacagtctcaggat-cctctcattccgatgtgattcggttcctctagaaattgtcgggagccgctcattgtcgtgccttgtgcaccgacg 1706987  T
Q  217 atcactcctcgccctcgtcagccttgggtgtt 248  Q
    | |||||| ||||||||| |||||||||||||    
T  1706986 accactccccgccctcgttagccttgggtgtt 1706955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 33174643 - 33174415
Alignment:
Q  21 ggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcca 120  Q
    |||||||||||| ||| | ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || | | |||    
T  33174643 ggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaac--tgtagtccca 33174546  T
Q  121 tacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatca 220  Q
    ||||| |||||| || |||||||| |||||||| ||||||||| ||| | |||||||||||||||| ||||||||||| | ||   ||||| ||||| ||    
T  33174545 tacctacacggcatcaggatccctctcattccgatgtgattcggttcgtctagaagctgtcgggagccgctcattgtcatgccccttgcaccggcgacca 33174446  T
Q  221 ctcctcgccctcgtcagccttgggtgttaca 251  Q
    |||| |||| |||| |||||||||| |||||    
T  33174445 ctccccgccttcgttagccttgggtattaca 33174415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 18447954 - 18448150
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||  || ||||||||||| | |  ||||||| ||||||||| ||||||||||||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcatt 18448053  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgt 247  Q
    ||| ||||||||| ||| | || ||||||||||||  ||||||||||||| |||| ||||| ||||| |||||| |||||||| ||||||| |||||    
T  18448054 ccgatgtgattcggttcctctaaaagctgtcgggaaccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgccagccttaggtgt 18448150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 1912668 - 1912434
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||||||||| | |    
T  1912668 ctgtggagttcttatggaatgggctaccaaa-agaagatgcatcttgttgatataggtagtaccaaacaattcttataaatctactttcaaccatgtagt 1912570  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||   |||| |||||||| |||||||| ||||||||  ||| | || ||||||| | ||| |||||||||||||||||| ||||||||||    
T  1912569 ctcatacctacataacctcaggatccctctcattccgatgtgattcagttcctctaaaagctgttgagagccgctcattgtcgtaccttgtgcactggcg 1912470  T
Q  217 atcact-cctcgccctcgtcagccttgggtgttaca 251  Q
    |||||| ||| | |||||||| || |||||||||||    
T  1912469 atcactcccttgtcctcgtcaaccgtgggtgttaca 1912434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 16379081 - 16378877
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||| |    
T  16379081 ctgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataagacttccttcaaccatgcagt 16378982  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||| ||||||||||||| |||||| |||||||||||||| ||| ||||| || || ||||  |||  |||||||||||||  ||||||||| ||||    
T  16378981 ctcatacttgcacggcctcggaatccctctcattccggtgtga-tcggttcatctataaactgttaggaaccgctcattgtcgtgtcttatgcaccggcg 16378883  T
Q  217 atcact 222  Q
    | ||||    
T  16378882 accact 16378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 30966346 - 30966233
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||| |||||||| |||    
T  30966346 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctca 30966247  T
Q  149 ttccggtgtgattc 162  Q
    ||||| || |||||    
T  30966246 ttccgatgcgattc 30966233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 24818470 - 24818325
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |    
T  24818470 ctgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaaccatgcagt 24818371  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| ||||||||||| |||||||| |||||||| ||||||||    
T  24818370 cccatacatgcacggcctcaggatccctctcattccgatgtgattc 24818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 30966834 - 30966689
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |    
T  30966834 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgcagt 30966735  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| || |||||||| |||||||| |||||||| || |||||    
T  30966734 cccatacatgtacggcctcaggatccctctcattccgatgcgattc 30966689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 254
Target Start/End: Complemental strand, 15639846 - 15639647
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||| | |||||||| |||||      ||| | ||| |||||||||||||| |||    
T  15639846 agaagatgtatgttgttgatataggtagtaccaaacaattcctataagcgtgccttcaactatgca------tacttccacagcctcgggatccctctca 15639753  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||| | ||| ||||| ||| | || ||||| ||||||| ||||||||||||| |||| ||||| ||||| |||||| ||| ||| |||| ||||||||||    
T  15639752 ttctgatgtaattcggttcgtctataagctatcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgctctcatcagtcttgggtgtt 15639653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 38898914 - 38899148
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||    ||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |    
T  38898914 ctgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagctctccttcaaccatgtagt 38899013  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
       |||||| |||||||||  |||| || || ||||| ||||||| |  |  | |||||| ||||||||| | |||||| || |  |||||||||   ||    
T  38899014 ctgatacctacacggcctcaagatcactctccttccgatgtgatttggcttgtctagaagttgtcgggagccactcattttcatgtcttatgcaccaacg 38899113  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| |||||||||||| |||| ||||||||    
T  38899114 accactccccgccctcgtcagtcttgagtgttaca 38899148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 38 - 163
Target Start/End: Complemental strand, 1953278 - 1953153
Alignment:
Q  38 gactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgg 137  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||| |  |||||||||||| | || |    
T  1953278 gactaccaaaaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcag 1953179  T
Q  138 gatccctatcattccggtgtgattcg 163  Q
    ||||||| |||||||| |||||||||    
T  1953178 gatccctctcattccgatgtgattcg 1953153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 29259628 - 29259767
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccata 122  Q
    ||||||||||||||   ||||  || ||||||||||||||||||||||| |||||||||||||||| | |||||| |||||||||||||||| | |||||    
T  29259628 agttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaaccatgcagtcccata 29259727  T
Q  123 cctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    | || |||| ||| |||||||| |||||||| ||||||||    
T  29259728 cttgtacggtctcaggatccctctcattccgatgtgattc 29259767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 5399851 - 5399964
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| || | |||||| |||||| ||||  ||||||| |||    
T  5399851 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttaaaccatacactcccatacttgcacgacctcaagatccctctca 5399950  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  5399951 ttccgatgtgattc 5399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 20502165 - 20502023
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||| |||||||||||||| | |||| ||| | |||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| |     
T  20502165 tgtgaagttcttatgaaatgggctaccaaaaa-aagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaaccatgcagtc 20502067  T
Q  118 ccatacctgcacggcc--tcgggatccctatcattccggtgtga 159  Q
    |||||| |||||| ||  | ||||||||| ||||||||||||||    
T  20502066 ccatacttgcacgaccttttgggatccctctcattccggtgtga 20502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 251
Target Start/End: Original strand, 18098667 - 18098798
Alignment:
Q  121 tacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatca 220  Q
    ||||| ||||||||| || | ||| |||||||| ||||||||||||| | || ||||||||||||| |||||| |||||| |||| ||||| ||||||||    
T  18098667 tacctacacggcctcagggttcctctcattccgatgtgattcgattcctctataagctgtcgggagccgctcaatgtcgtgccttgtgcaccggcgatca 18098766  T
Q  221 ctcctc-gccctcgtcagccttgggtgttaca 251  Q
    |||| | ||||||||||||| |||||||||||    
T  18098767 ctcccctgccctcgtcagccgtgggtgttaca 18098798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 30963754 - 30963857
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |  | |||||||||||| ||  ||||||| |||    
T  30963754 agaagatgcatcttgttgatataggtagaaccatacaattcttataagttttccttcaaccatgcattctcttacctgcacggcttcatgatccctctca 30963853  T
Q  149 ttcc 152  Q
    ||||    
T  30963854 ttcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 11388331 - 11388187
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |    
T  11388331 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaaccatgtagt 11388233  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
      ||||||| |||||| || |||| ||| |||||||| |||||||||    
T  11388232 ctcatacctacacggcatcaggat-cctctcattccgatgtgattcg 11388187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 13191115 - 13191021
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||||  |||||| |||||||||    
T  13191115 tggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataagtcttccttgaaccatgca 13191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 8074033 - 8073944
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaacc 109  Q
    ||||||||||||||||| | |||| | | |||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||    
T  8074033 tggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtctcccttcaacc 8073944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 11394677 - 11394554
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||||| ||||  || |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |    
T  11394677 ctgtgaagttcttatggaatag-ctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaaccatgtagt 11394580  T
Q  117 tccatacctgcacggcctcgggatcc 142  Q
      ||||||| |||||| || ||||||    
T  11394579 ctcatacctacacggcatcaggatcc 11394554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 30963299 - 30963362
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  30963299 aagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaatcatgca 30963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 30961922 - 30962042
Alignment:
Q  54 atgcatcttgttgatataggtagtaccaaacaattcttataag-ctt-------tccttcaaccatgcaattccatacctgcacggcctcgggatcccta 145  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||       ||||||||||||||||| |||||||| |||||| || ||||| ||     
T  30961922 atgcatcttgttgatataggtagtaccaatcaaatcttataagacttccttaaatccttcaaccatgcaatcccatacctacacggcttcaggatctctc 30962021  T
Q  146 tcattccggtgtgattcgatt 166  Q
    |||||| | ||||||||||||    
T  30962022 tcattctgatgtgattcgatt 30962042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 83161 - 83028
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||| ||||||||||| |||   |||| ||| | ||||| |||||||||| ||||||||||||||||| |||||||||||| | |||||||||||| | |    
T  83161 ctgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagcataccttcaaccatgtagt 83062  T
Q  117 tccatacctgcacggcctcgggatccctatcatt 150  Q
      |||||||||||   ||| |||||||| |||||    
T  83061 ctcatacctgcacaatctcaggatccctctcatt 83028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 180
Target Start/End: Complemental strand, 16542095 - 16541966
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||  |||||||||||||| |    ||||||| ||| ||   |||||||||||||||    
T  16542095 aagatacatcttgttgatataggtagtacaaaacaattattataagtcttccttcaaccatgtagagtcatacctacacagctctgggatccctatcatt 16541996  T
Q  151 ccggtgtgattcgattcatttagaagctgt 180  Q
    | | |||||||||  |||  ||||||||||    
T  16541995 ctgatgtgattcggctcacctagaagctgt 16541966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 8181394 - 8181446
Alignment:
Q  58 atcttgttgatataggtagtaccaaacaattcttataagctttccttcaacca 110  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  8181394 atcttgttgatataggtagtaccaaacaattcttaaaagtcttccttcaacca 8181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 36924456 - 36924519
Alignment:
Q  49 agaagatgcatcttgttgatatag--gtagtaccaaacaattcttataagctttccttcaacca 110  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||||||| ||||||||||||    
T  36924456 agaagatgcatcttgttgatatataagtaataccaaacaattcttataagccttccttcaacca 36924519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 26864851 - 26864905
Alignment:
Q  50 gaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctt 104  Q
    ||||||||||||||| ||| |||||||||||||| | |||||| |||| ||||||    
T  26864851 gaagatgcatcttgtcgatgtaggtagtaccaaagagttcttacaagccttcctt 26864905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 39653276 - 39653073
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||| |||    
T  39653276 agaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctca 39653177  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||  ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||| |||||| || ||||||||||||||||||||    
T  39653176 ttccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtgtt 39653077  T
Q  249 acaa 252  Q
    ||||    
T  39653076 acaa 39653073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 11180036 - 11180269
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  11180036 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 11180135  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||| |||||||| |||||||||  ||||||| ||| | |||||||||||||||| |||||||||||||||||| ||||| ||||    
T  11180136 cccatacctacaaggcctcaggatccctctcattccgg-ctgattcggttcctctagaagctgtcgggagccgctcattgtcgtaccttgtgcaccggcg 11180234  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||| ||||||||||||||||||    
T  11180235 accactccccgccctcttcagccttgggtgttaca 11180269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 28561890 - 28561656
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  28561890 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 28561791  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||||||||||||| ||| |||| |||||||||||||||||  ||| | |||||| |||| | || ||||||||||||| |||| ||||| ||||    
T  28561790 cccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagttgtcagtagccgctcattgtcgtgccttgtgcaccggcg 28561691  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| |||||||||||| |||||||||||||    
T  28561690 accactccccgccctcgtcagtcttgggtgttaca 28561656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 50347890 - 50347658
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | | |    
T  50347890 ctgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccaagtagt 50347791  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||| | || |||||| |||||||| ||||||||| |||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  50347790 ctcatacatacaaggcctcaggatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcattgtcgttccttgtgcaccggcg 50347691  T
Q  217 atcactcctcgccctcgtcagccttgggtgtta 249  Q
    |||||||| ||||||||||||||||||||||||    
T  50347690 atcactccccgccctcgtcagccttgggtgtta 50347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 16811493 - 16811291
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| | | ||| |||| ||||||||| |||||||| |||    
T  16811493 agaagatgcatcttgttgaaataggtagtacccaacaattcttataagccttccttcaaccatggagtcccaaacctacacggcctcaggatccctctca 16811394  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||| |||||| | |||||||||||||||||||||    
T  16811393 ttccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagccttgggtgtt 16811294  T
Q  249 aca 251  Q
    |||    
T  16811293 aca 16811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 13150101 - 13150334
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||| | |    
T  13150101 ctgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaaccatgtagt 13150200  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||| ||| |||| ||||||||| |||||||| ||| | |||||||||||| ||| ||||||||||||| |||| ||||| ||||    
T  13150201 cccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcgagagccgctcattgtcgtgccttgtgcaccggcg 13150300  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||| ||||||||||||||||||    
T  13150301 a-cactccccgccctcatcagccttgggtgttaca 13150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 32227223 - 32227444
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   |||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  32227223 ctgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 32227322  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||  |||||||| ||||||||| |||||||| ||| | |||||| ||| ||||| |||||||||| || |||| ||||||||||    
T  32227323 cccatacctacaaggccttaggatccctctcattccggcgtgattcggttcctctagaagttgttgggagccgctcattgttgtgccttgtgcactggcg 32227422  T
Q  217 atcactcctcgccctcgtcagc 238  Q
    | |||||| |||||||||||||    
T  32227423 accactccccgccctcgtcagc 32227444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 49 - 253
Target Start/End: Complemental strand, 14814061 - 14813857
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||| |  ||||||| ||||||||| ||| |||| |||    
T  14814061 agaagatgcatcttattgatataggtagtaccaaacaattattataagccttcctttaaccatgcagtctcatacctacacggcctcaggaaccctctca 14813962  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    ||||||||||||||| ||| | |||||||| || | || |||| |||||||| |||| ||||| ||||| |||||||||||||||||||||||| |||||    
T  14813961 ttccggtgtgattcggttcctctagaagctctcagaagccgctaattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgtgtgtt 14813862  T
Q  249 acaat 253  Q
    |||||    
T  14813861 acaat 14813857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 16811037 - 16810840
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||| ||||||| ||||||  |||||||||||||||| |||| ||||||||||| | ||||| || |||||||||  ||||||| |||    
T  16811037 agaagatgcatcttgtagatatagttagtacgcaacaattcttataagccttccatcaaccatgcagtcccatatctacacggcctcaagatccctctca 16810938  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtg 246  Q
    ||||| ||||||||||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||| |||||| |||||||||||||||| ||||    
T  16810937 ttccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttcggtg 16810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 37045179 - 37044944
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||||  ||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||  |||| | |    
T  37045179 ctgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagcattccttcattcatgtagt 37045080  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||| |||| ||||||||| |||||||| |||||| | ||||||||| ||| | |||||||||||||||| ||||||||| ||| |||| ||||| || |    
T  37045079 cccacacctacacggcctcaggatccctctcattcagatgtgattcggttcctctagaagctgtcgggagccgctcattggcgtgccttgtgcaccggtg 37044980  T
Q  217 atcactcctc-gccctcgtcagccttgggtgttaca 251  Q
    | |||||| | ||||||||||||  |||||||||||    
T  37044979 accactcccctgccctcgtcagctgtgggtgttaca 37044944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 30529825 - 30529608
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccata 122  Q
    |||||||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| | |  ||||    
T  30529825 agttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaaccatgtagtctcata 30529726  T
Q  123 cctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcact 222  Q
    ||| ||| ||||| |||||||| |||||||| ||||||||  ||| | |||||| |||||||||  ||| |||||||| |||| ||||||| ||| ||||    
T  30529725 cctacacagcctcaggatccctctcattccgatgtgattcagttcctctagaagttgtcgggagctgcttattgtcgtgccttgtgcactgacgaccact 30529626  T
Q  223 cctcgccctcgtcagcct 240  Q
    | ||||||||||||||||    
T  30529625 catcgccctcgtcagcct 30529608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 32796937 - 32797171
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| | |    
T  32796937 ctgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtagt 32797036  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
    | ||||||| || || ||| |||||||| | ||| || |||||||||  |  | |||||||||||||||| || |||||||| || ||| ||||| ||||    
T  32797037 ttcatacctacatggtctcaggatccctcttatttcgatgtgattcggcttgtctagaagctgtcgggagccgttcattgtcata-cttgtgcaccggcg 32797135  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | |||||| ||||||||| |||||||||||||||||    
T  32797136 accactccacgccctcgttagccttgggtgttacaa 32797171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 25239079 - 25239253
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  | |    
T  25239079 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttcaaccatatagt 25239178  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgct 191  Q
     |||||||| |||| |||| | |||||| |||| ||||||||||||||||| | |||||||||||||||| ||||    
T  25239179 cccatacctacacgacctcagaatccctctcataccggtgtgattcgattcctctagaagctgtcgggagccgct 25239253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 25230250 - 25230482
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||  ||| | |||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |    
T  25230250 ctgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagt 25230349  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||| |||| |||||||| || ||||| ||||||| | ||| | || ||| ||||||||| ||||||||||||| |||| ||||| |||     
T  25230350 cccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcgggagccgctcattgtcgtgccttgtgcaccggct 25230449  T
Q  217 atcact-cctcgccctcgtcagccttgggtgtt 248  Q
    |||||| |||  |||||||||||  ||||||||    
T  25230450 atcactccctttccctcgtcagctgtgggtgtt 25230482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 25237837 - 25238069
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||  ||| | |||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |    
T  25237837 ctgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagt 25237936  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||| |||| |||||||| || ||||| ||||||| | ||| | || ||| ||||||||| ||||||||||||| |||| ||||| |||     
T  25237937 cccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcgggagccgctcattgtcgtgccttgtgcaccggct 25238036  T
Q  217 atcact-cctcgccctcgtcagccttgggtgtt 248  Q
    |||||| |||  |||||||||||  ||||||||    
T  25238037 atcactccctttccctcgtcagctgtgggtgtt 25238069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 32227644 - 32227457
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  32227644 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 32227545  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtacctt 205  Q
     |||||||| || ||||||  ||||||| ||||||||| |||||||| ||| | |||||||||||||||| ||||||||||||| ||||    
T  32227544 cccatacctacaaggcctc-agatccctctcattccggcgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgcctt 32227457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 2911239 - 2911005
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||| |||||||||||||||||||||| || ||||||||| |||||| | ||| ||||||||||   |    
T  2911239 ctgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataaccattctttcaaccatgtggt 2911140  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||||||||||||||||||| |||||| ||||||||||| ||| | ||||||||||  |||  |||| ||| ||||  ||| ||||| ||||    
T  2911139 cccatacctgcacggcctcgggatccctctcattcaggtgtgattcggttcgtctagaagctgttaggatccgcttattatcgtgtcttgtgcaccggcg 2911040  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| || ||||||||  |||||||||||||    
T  2911039 accactccccgtcctcgtcaatcttgggtgttaca 2911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 20885120 - 20885325
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    ||||||||||||||| |||   |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| | |     
T  20885120 tgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaaccatgtagtc 20885219  T
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
     ||||||| |||| ||||  ||||||| ||||| || ||||||| | ||| | |||||| ||||||||| ||||||||| ||| |||| ||||| |||||    
T  20885220 acatacctacacgacctcaagatccctctcattgcgatgtgatt-ggttcctctagaagttgtcgggagccgctcattggcgtgccttgtgcaccggcga 20885318  T
Q  218 tcactcc 224  Q
    |||||||    
T  20885319 tcactcc 20885325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 25230712 - 25230914
Alignment:
Q  22 gagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccat 121  Q
    ||||||||||| ||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |  |||    
T  25230712 gagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaaccatgtagtctcat 25230811  T
Q  122 acctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcac 221  Q
    |||| || |||||| |||||||| |||||||  ||||||| | ||| | || |||||||||||||  |||||||||||| |||| ||||| || ||||||    
T  25230812 acctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcgggagctgctcattgtcgtgccttgtgcaccggagatcac 25230911  T
Q  222 tcc 224  Q
    |||    
T  25230912 tcc 25230914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 25238299 - 25238501
Alignment:
Q  22 gagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccat 121  Q
    ||||||||||| ||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |  |||    
T  25238299 gagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaaccatgtagtctcat 25238398  T
Q  122 acctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcac 221  Q
    |||| || |||||| |||||||| |||||||  ||||||| | ||| | || |||||||||||||  |||||||||||| |||| ||||| || ||||||    
T  25238399 acctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcgggagctgctcattgtcgtgccttgtgcaccggagatcac 25238498  T
Q  222 tcc 224  Q
    |||    
T  25238499 tcc 25238501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 31284278 - 31284423
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  31284278 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 31284377  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||||||| ||||  ||||||| |||||||| ||||||||    
T  31284378 cccatacctgcacgacctcaagatccctctcattccgatgtgattc 31284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 39641081 - 39640900
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||| | |    
T  39641081 ctgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagtcttccttcaaccatgtagt 39640982  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtc 198  Q
      ||||||| ||||||||| ||||| || |||||| | ||||||||||||| | || ||||||||||||| || ||||||||    
T  39640981 ctcatacctacacggcctcaggatctctctcattctgatgtgattcgattcttctaaaagctgtcgggagccgttcattgtc 39640900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 25248253 - 25248110
Alignment:
Q  19 gtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattc 118  Q
    |||||||| ||||| ||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| | |    
T  25248253 gtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaaccatgcagtcc 25248154  T
Q  119 catacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    ||||||||||||||||  | |||||| |||||||| ||||||||    
T  25248153 catacctgcacggccttagaatccctctcattccgatgtgattc 25248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 8067390 - 8067279
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||| |||||||||||||||||| || ||||| |||||    
T  8067390 aagatgcatcttgttgatataggtagtactaaacaattcttataagccggccttcaaccatgcaatcccatacctgcacggcctcagggtccctctcatt 8067291  T
Q  151 ccggtgtgattc 162  Q
    ||| ||||||||    
T  8067290 ccgatgtgattc 8067279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 41472442 - 41472300
Alignment:
Q  19 gtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattc 118  Q
    |||||||||||||| |||   ||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |      
T  41472442 gtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc-ttccttcaaccatgcagtct 41472344  T
Q  119 catacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||| ||| |||| |||||||| |||||||| ||||||||    
T  41472343 catacctgtacgacctcaggatccctctcattccgatgtgattc 41472300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 14820264 - 14820110
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | || ||||   |||||||| ||||| ||| ||| |||| |||||    
T  14820264 aagatgcatcttgttgatataagtagtaccaaacaattcttataagccttcctttagccgtgcagccccatacctacacgggctcaggaaccctctcatt 14820165  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtacctt 205  Q
     |||||||||||| ||| | ||||||||||| |||| |||||||| |||| ||||    
T  14820164 gcggtgtgattcggttcctctagaagctgtcaggagccgctcattatcgtgcctt 14820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 25803010 - 25803240
Alignment:
Q  21 ggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcca 120  Q
    |||||||||||||||| |  |||  || ||||||| |||||||||  ||||||||||||||||||||||||| |||  || ||||||||||||| | |||    
T  25803010 ggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattcttacaagtcttacttcaaccatgcagtccca 25803109  T
Q  121 tacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatca 220  Q
    ||||| |||| | |  ||| |||| | |||||| | ||||||| ||||| |||||||||| || || ||||||||||  | |||| |||||  |||| ||    
T  25803110 tacctacacgacattaggaaccctcttattccgatatgattcggttcatctagaagctgttggaagccgctcattgttatgccttgtgcaccagcgacca 25803209  T
Q  221 ctcctcgccctcgtcagccttgggtgttaca 251  Q
    |||| || ||| |||||||||||||||||||    
T  25803210 ctccccgtcctagtcagccttgggtgttaca 25803240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 32386736 - 32386850
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || |    
T  32386736 ctgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatacagt 32386835  T
Q  117 tccatacctgcacgg 131  Q
     ||||||||||||||    
T  32386836 cccatacctgcacgg 32386850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 27187332 - 27187477
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||| ||| || ||||||||| |    
T  27187332 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagccttcatttaaccatgcagt 27187431  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| ||||| ||||| |||||||| |||||||  ||||||||    
T  27187432 cccatacatgcacagcctcaggatccctctcattccaatgtgattc 27187477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 7477303 - 7477191
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| |  |||||||||||| | |  |||||||| |||    
T  7477303 agaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatccctctca 7477204  T
Q  149 ttccggtgtgatt 161  Q
    ||||| |||||||    
T  7477203 ttccgatgtgatt 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 7493993 - 7493881
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| |  |||||||||||| | |  ||||| || |||    
T  7493993 agaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatctctctca 7493894  T
Q  149 ttccggtgtgatt 161  Q
    ||||| |||||||    
T  7493893 ttccgatgtgatt 7493881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 13150556 - 13150651
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  13150556 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatg 13150651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 25238686 - 25238781
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||||||||    
T  25238686 ctgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagtcttccttcaaccatg 25238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 4067362 - 4067454
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaacc 109  Q
    |||||||||||||||| |||   |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  4067362 ctgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaacc 4067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 29224436 - 29224371
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||    
T  29224436 agaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaaccatgca 29224371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 39653627 - 39653530
Alignment:
Q  154 gtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||||||  ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||| |||||| | ||||||||||||||||||||||||    
T  39653627 gtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagccttgggtgttaca 39653530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 47518358 - 47518430
Alignment:
Q  54 atgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctg 126  Q
    ||||||||||||| || || ||||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  47518358 atgcatcttgttggtagagatagtttcaaacaattcttataagttttccttcaaccatgcaattccatacctg 47518430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 25802582 - 25802685
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| |||| | ||||||||| |  ||||||| || |||| |  ||||||| |||    
T  25802582 agaagatgcatcttgttgatataggtagtaccaaaccattcttatcagccttccgttaaccatgcagtctcatacctacatggccacatgatccctctca 25802681  T
Q  149 ttcc 152  Q
    ||||    
T  25802682 ttcc 25802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 13155307 - 13155438
Alignment:
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| |||||| | ||||| ||| |||||||| ||| | |||||||||||| ||  ||||||||||||| |||| ||||| |||||    
T  13155307 ccatacctacaaggcctcaggatcc-tctcatttcggcgtgattcggttcctctagaagctgtcgagac-cgctcattgtcgtgccttgtgcaccggcga 13155404  T
Q  218 tcactcctcgccctcgtcagccttgggtgttacaa 252  Q
     |||||| ||||||||||||| |||||||||||||    
T  13155405 -cactccccgccctcgtcagcattgggtgttacaa 13155438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 970956 - 970875
Alignment:
Q  171 tagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    |||||| |||| |||| |||||||||||||||||| ||| ||||| | |||||| |||||||| | ||||||||||||||||    
T  970956 tagaagttgtcaggagccgctcattgtcgtaccttgtgccctggcaaccactccccgccctcgccggccttgggtgttacaa 970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 41474100 - 41473996
Alignment:
Q  58 atcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgt 157  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||| |||||| || |  |||||||| ||| ||||  ||||||| ||||| || |||    
T  41474100 atcttgttgatataggaagtatcaaacaattcttataagtcttcctttaaccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgt 41474001  T
Q  158 gattc 162  Q
    |||||    
T  41474000 gattc 41473996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 31103985 - 31104071
Alignment:
Q  40 ctactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctg 126  Q
    |||| ||| |||| |||||||| |||| ||||| ||||| |||||||||||||||||  |||||| |||||||||||  ||||||||    
T  31103985 ctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataagtcttccttgaaccatgcaatctcatacctg 31104071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 3890088 - 3890046
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttat 93  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  3890088 aagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 3899910 - 3899868
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttat 93  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  3899910 aagatgcatcttgttggtatatgtagtaccaaacaattcttat 3899868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 25238863 - 25238907
Alignment:
Q  207 tgcactggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||    
T  25238863 tgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 25238907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 26310023 - 26310090
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||| ||| |||| |||||| |||| |||||||||||    |||||||||||||||||    
T  26310023 agaagatgcatctttttggtatatgtagtaacaaaaaattcttataaatcgtccttcaaccatgcaat 26310090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 12820703 - 12820643
Alignment:
Q  102 cttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    ||||||||||||| | ||||||||| |||||||  | |||||| |||||||| ||||||||    
T  12820703 cttcaaccatgcagtcccatacctgtacggccttagaatccctctcattccgatgtgattc 12820643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 1364 - 1130
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  1364 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 1265  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||| |||||| ||| || | |||||||||||||||||| ||| | |||||| |||| |||| ||||||||||||| |||| ||||| ||||    
T  1264 cccatacctgcatggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagttgtcaggagccgctcattgtcgtgccttgtgcaccggcg 1165  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  1164 accactccccgccctcgtcagccttgggtgttaca 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 34405593 - 34405827
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  34405593 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 34405692  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||  |||||||| |||||||||||||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  34405693 cccatacctacaaggccttaggatccctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 34405792  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||||||||||||||||||    
T  34405793 accactccccgccctcgtcagccttgggtgttaca 34405827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 2189288 - 2189054
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   |||   || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| |    
T  2189288 ctgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagccttctttcaaccatgcagt 2189189  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||| |||||||| ||||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  2189188 cccacacctgcacagcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 2189089  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||||||| ||||| ||||||||    
T  2189088 accactccccgccctcgtcatccttgagtgttaca 2189054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 36422396 - 36422163
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  36422396 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 36422297  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||  |||||||| ||||||||| |||||||||||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  36422296 cccatacctacaaggccttaggatccctctcattccggcgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcg 36422197  T
Q  217 atcactcctcgccctcgtcagccttgggtgttac 250  Q
    | |||||| |  ||||||| | ||||||||||||    
T  36422196 accactccccatcctcgtcggtcttgggtgttac 36422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 49 - 253
Target Start/End: Original strand, 29357490 - 29357693
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| | ||||||||||||| ||||||||| ||| |||    
T  29357490 agaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttcaaccatgcagtcccatacctgcacgacctcgggatacctctca 29357589  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgtt 248  Q
    || |||||||||||  ||||| |||||| ||||||||| ||||||||||||| |||||||||  ||||| || |   |||||||||||||||||||||||    
T  29357590 tt-cggtgtgattcagttcatctagaagttgtcgggagccgctcattgtcgtgccttatgcatcggcgaccattttacgccctcgtcagccttgggtgtt 29357688  T
Q  249 acaat 253  Q
    |||||    
T  29357689 acaat 29357693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 6747600 - 6747834
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||| ||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |    
T  6747600 ctgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgtagt 6747699  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||| |||||||| |||||||  ||||||||   |  | |||||| ||||||||| ||||||||||| | |||| ||||| ||||    
T  6747700 atcatacctacacggcctcaggatccctctcattccaatgtgattcagcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcg 6747799  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||||||  |||||||||||||||||||||||||    
T  6747800 accactccctgccctcgtcagccttgggtgttaca 6747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 51 - 251
Target Start/End: Complemental strand, 43233523 - 43233323
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||| || |  ||||||| |||||||||  ||||||| |||||    
T  43233523 aagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcctttaaccatacagtcacatacctacacggcctcatgatccctctcatt 43233424  T
Q  151 ccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttac 250  Q
     |||||||||||| ||| | ||||||||||  |||| ||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  43233423 tcggtgtgattcggttcctctagaagctgttaggagccgctcattgtcgtgccttatgcaccggcgaccactcctcgcactcgtcagccttgggtgttac 43233324  T
Q  251 a 251  Q
    |    
T  43233323 a 43233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 2193400 - 2193212
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||| ||||||||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  2193400 ctgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 2193301  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtacctt 205  Q
     |||||||||||||| ||| ||| |||| |||||||||||||||||| ||| | ||||||||||| |||| || |||||||||| ||||    
T  2193300 cccatacctgcacggtctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcaggagccgttcattgtcgtgcctt 2193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 679960 - 679727
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||| | |||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| | |    
T  679960 ctgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagtaccaa-caattcttataagccttccttcagccatgtact 679862  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||| |||| |||||||| |||||| | ||||||||  ||| | ||||||||||||||||  |||||||||||| | || ||||  ||||    
T  679861 cccatacctacacgacctcaggatccctctcattctgatgtgattcagttcctctagaagctgtcgggagcagctcattgtcgtgctttgtgcatcggcg 679762  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| || ||||||||||||| |||||||||    
T  679761 accactccccgtcctcgtcagccttaggtgttaca 679727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 61 - 254
Target Start/End: Original strand, 26957603 - 26957796
Alignment:
Q  61 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgat 160  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||||||| ||| |||||  ||||||| |||||||| ||||||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatgtgat 26957702  T
Q  161 tcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttacaatg 254  Q
    ||| ||| | |||||| ||||||||| ||||||||||||| |||| ||||| | ||| |||| | |||||||||| ||||| ||||||||||||    
T  26957703 tcggttcctctagaagttgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccacttcccgccctcgtcggcctttggtgttacaatg 26957796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 2611657 - 2611888
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||  ||| | |||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||  | |  |    
T  2611657 tggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttccaccatatagtctc 2611756  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatc 219  Q
    |||||| || | |||| ||| |||| |||||||| ||||||||  ||| | |||||||||||||||| ||||||||||||| |||| ||||| ||||| |    
T  2611757 atacctacatgacctcaggacccctctcattccgatgtgattcagttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgacc 2611856  T
Q  220 actcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| | |||||||||||||| |||||||||    
T  2611857 actccccaccctcgtcagcctttggtgttaca 2611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 35527123 - 35527348
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||| |||| ||| ||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||  || |    
T  35527123 ctgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaaccaaccagt 35527222  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||  |||||| ||||||||||||| ||||| |||||||||||| ||| | |||||||||| ||||| ||||||||| |||  ||| ||||| | ||    
T  35527223 cccatatttgcacgacctcgggatccctctcatttcggtgtgattcggttcgtctagaagctgttgggagccgctcattg-cgtgtcttgtgcaccgacg 35527321  T
Q  217 atcactcctcgccctcgtcagccttgg 243  Q
    | |||||| || |||||||||||||||    
T  35527322 accactccccgtcctcgtcagccttgg 35527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 42515688 - 42515455
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |    
T  42515688 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagccttccttcaaccatgtagt 42515589  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| ||||||||| |||||||| |||||| | ||||||||| ||| | ||||||||||||||||  ||||||||||   ||   ||||| ||||    
T  42515588 ctcatacctacacggcctcaggatccctctcattctgatgtgattcggttcgtctagaagctgtcgggagctgctcattgtcacgccccttgcaccggcg 42515489  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | ||||||  ||||||||||||||||||| |||||    
T  42515488 a-cactccctgccctcgtcagccttgggtattaca 42515455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 28495998 - 28495791
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| | |    
T  28495998 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagccttccttcaaccatgtagt 28495899  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| |||||||||  ||||||| |||||||| ||||||||||||| | |||||| ||| ||||| |||| ||||| || |||| ||||| ||||    
T  28495898 cccatacctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagttgttgggagccgctaattgttgtgccttgtgcaccggcg 28495799  T
Q  217 atcactcc 224  Q
    | ||||||    
T  28495798 accactcc 28495791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 35474123 - 35474357
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||||  || ||||||||||| | |    
T  35474123 ctgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttcttcaaccatgtagt 35474222  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
      ||||||| |||| |||  |||||||| ||||||||||||||||||| |  | |||||| ||||||||  ||||||||||||| |||| ||||| | ||    
T  35474223 ctcatacctacacgacctaaggatccctctcattccggtgtgattcgactgttctagaagttgtcgggaaccgctcattgtcgtgccttgtgcaccgacg 35474322  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||| ||| |||||||| |||||||||    
T  35474323 accactccccgcactcatcagccttaggtgttaca 35474357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 2941759 - 2941904
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  2941759 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagccttccttcaaccatgcagt 2941858  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||| |||||||| |||||||| |||||| | ||||||||    
T  2941859 cccatacctgtacggcctcaggatccctctcattctgatgtgattc 2941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 18833430 - 18833285
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||| |    
T  18833430 ctgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctttccctcaaccatgcagt 18833331  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||||| |||||||| ||| |||| |||||||| ||||||||    
T  18833330 tccatacctgtacggcctcaggaaccctctcattccgatgtgattc 18833285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 42515236 - 42515091
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |    
T  42515236 ctgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaatcatgcagt 42515137  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      ||||||||||||||||| |||||||| |||||||| ||||||||    
T  42515136 ctcatacctgcacggcctcaggatccctctcattccgatgtgattc 42515091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 9125103 - 9124958
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |    
T  9125103 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctttaaccatacagt 9125004  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
      |||||||||||||||||  |||| || |||||||| ||||||||    
T  9125003 ctcatacctgcacggcctcaagatctctctcattccgatgtgattc 9124958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 13125138 - 13125283
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  13125138 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 13125237  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||||| ||||||  ||||||| |||||||| | ||||||    
T  13125238 cccatacctgcagggcctcaagatccctctcattccgatatgattc 13125283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 6719079 - 6719222
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    ||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||    
T  6719079 tggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaaccatgtagtccc 6719178  T
Q  120 atacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
    |||||| ||| ||||| |||||||| |||||||  |||||||||    
T  6719179 atacctacacagcctcaggatccctctcattccaatgtgattcg 6719222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 11517426 - 11517535
Alignment:
Q  52 agatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattc 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||| |||||||| |||||||| ||||||    
T  11517426 agatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accatgcagtcccatacctgtacggcctcaggatccctctcattc 11517524  T
Q  152 cggtgtgattc 162  Q
    || ||||||||    
T  11517525 cgatgtgattc 11517535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 28495610 - 28495788
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||  ||  |||||||||||||||  |||||||||||||| | |    
T  28495610 ctgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagtcttccttcaaccatgtagt 28495709  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcatt 195  Q
     |||||||| |||| |||| |||||||| |||||||| || |||||||||| | |||||||||| ||||| ||||||||    
T  28495710 cccatacctacacgacctcaggatccctctcattccgatgggattcgattcctctagaagctgttgggagccgctcatt 28495788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 77 - 253
Target Start/End: Original strand, 3305374 - 3305550
Alignment:
Q  77 taccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaag 176  Q
    |||||||||||||| |||||| ||| |||||||||| | | |||||| | ||||||||| |||||||  ||||| || ||||||||| ||| | ||||||    
T  3305374 taccaaacaattctcataagccttcattcaaccatgtagtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggttcctctagaag 3305473  T
Q  177 ctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttacaat 253  Q
    ||||||||||  |||||||||||| |||||| ||| ||||| |||||  ||||||||||||||||  ||||||||||    
T  3305474 ctgtcgggagctgctcattgtcgtgccttatccaccggcgaccactctccgccctcgtcagccttatgtgttacaat 3305550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 10430805 - 10430673
Alignment:
Q  119 catacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgat 218  Q
    ||||||||||||||||| ||| |||| ||||||||||||||| || ||| | ||||||||||| |||| ||||||||||||| |||| ||||| |||||     
T  10430805 catacctgcacggcctcaggaaccctctcattccggtgtgatacggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgac 10430706  T
Q  219 cactcctcgccctcgtcagccttgggtgttaca 251  Q
    |||||| ||||||| ||||||||||||||||||    
T  10430705 cactccccgccctcatcagccttgggtgttaca 10430673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 36015413 - 36015557
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||| | ||| | || |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |    
T  36015413 ctgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttcaaccatggagt 36015512  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
      ||||| ||||| |||| ||||||||| ||||||||||||||||    
T  36015513 ctcatacttgcactgccttgggatccctctcattccggtgtgatt 36015557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 46425885 - 46425705
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| ||||   |||  || ||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||| | |    
T  46425885 ctgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagccttatttcaaccatgtagt 46425786  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgt 197  Q
     |||||||| || || ||| |||||||| |||||||| |||||||||  |  | |||||||||||||||| ||||| ||||    
T  46425785 cccatacctacatggtctcaggatccctctcattccgatgtgattcggcttgtctagaagctgtcgggagccgctctttgt 46425705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 29039027 - 29039248
Alignment:
Q  22 gagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccat 121  Q
    ||||||||||| ||| || ||  ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||||||| | |  |||    
T  29039027 gagttcttatggaatggattatcaaaaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagcctccattcaaccatgtagtcacat 29039126  T
Q  122 acctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcac 221  Q
    | || ||||||||| |||| ||| |||||||| ||||||||| ||          |||||||||| ||||||||||||| |||| ||||| |||||||||    
T  29039127 atctacacggcctcaggatgcctctcattccgatgtgattcggtt---------tctgtcgggagccgctcattgtcgtgccttgtgcaccggcgatcac 29039217  T
Q  222 tcctc-gccctcgtcagccttgggtgttaca 251  Q
    ||| | |||| | |||||| |||||||||||    
T  29039218 tcccctgcccccatcagccgtgggtgttaca 29039248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 5406624 - 5406735
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   |||||||||||||||| | ||||||| ||||| | |  ||||||||||||||    
T  5406624 aagatgcatcttgttgatataggtaataccaaacaattcttataaatcttccttcaaccatgcagtcccataccggcacgactttaggatccctatcatt 5406723  T
Q  151 ccggtgtgattc 162  Q
    ||| ||||||||    
T  5406724 ccgatgtgattc 5406735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 2463685 - 2463551
Alignment:
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| ||| |||| ||||||||||||| |||| ||| | ||||||||||  |||| || |||||||||| |||| ||||| |||||    
T  2463685 ccatacctacatggcctcaggaaccctctcattccggtgtgtttcggttcctctagaagctgttaggagccgttcattgtcgtgccttgtgcaccggcga 2463586  T
Q  218 tcactcctcgccctcgtcagccttgggtgttacaa 252  Q
     |||||| |||||||||||||||||||||||||||    
T  2463585 ccactccccgccctcgtcagccttgggtgttacaa 2463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 2465877 - 2465782
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2465877 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagccttccttcaaccatg 2465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 2466068 - 2465950
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| | |    
T  2466068 ctgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagccttccttcaaccatgtagt 2465969  T
Q  117 tccatacctgcacggcctc 135  Q
     |||||||| || ||||||    
T  2465968 cccatacctacatggcctc 2465950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 22529269 - 22529418
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||| |   |||||| | || | |||| |||||||| |||    
T  22529269 agaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttcaaccatgtaggcccatacttacatgacctcaggatccctctca 22529368  T
Q  149 ttccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtc 198  Q
    ||| | | ||||||| ||| | ||||||| | |||||| |||||||||||    
T  22529369 ttcggatatgattcggttcgtctagaagcaggcgggagccgctcattgtc 22529418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 159
Target Start/End: Complemental strand, 25182471 - 25182363
Alignment:
Q  51 aagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcatt 150  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |  ||||| ||||| | ||| ||||| || |||||    
T  25182471 aagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacttgcacagtctcaggatctctctcatt 25182372  T
Q  151 ccggtgtga 159  Q
    ||| |||||    
T  25182371 ccgatgtga 25182363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 13124757 - 13124838
Alignment:
Q  71 aggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattcc 152  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||| |||||||    
T  13124757 aggtagtaccacacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattcc 13124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 31406586 - 31406735
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||||||  | ||||  || |||||||||||||||||||||||||||  ||||||||||||| |||||   || ||||||||| || |    
T  31406586 ctgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataagtcatctttcaaccattcagt 31406685  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgatt 166  Q
     ||| | ||||||||| || |||||||| |||||  | ||||||||||||    
T  31406686 cccagatctgcacggcttcaggatccctctcattttgatgtgattcgatt 31406735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 11372558 - 11372468
Alignment:
Q  54 atgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccct 144  Q
    ||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| || ||||| |||| ||||    
T  11372558 atgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaaccatacaatttcatacctacatggccttgggaaccct 11372468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 26421307 - 26421401
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 111  Q
    |||||||||||||||| ||| ||||||  || | || ||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||    
T  26421307 ctgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataagtcttccttcaaccat 26421401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 31743858 - 31743923
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||    
T  31743858 agaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgca 31743923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 1628854 - 1628745
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattcc 119  Q
    |||||||||||||  || | || | ||| |||||||||||||||||||||| | |||||||||||||   |||||||| || ||||||||||||||| ||    
T  1628854 tggagttcttatggtatgggcttcaaaaaagaagatgcatcttgttgatatcgatagtaccaaacaa---ttataagcctttcttcaaccatgcaatccc 1628758  T
Q  120 atacctgcacggc 132  Q
    ||| |||||||||    
T  1628757 atatctgcacggc 1628745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 26421762 - 26421880
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||| |||||||||| ||| | ||||  || ||||||| |||||||||| |||||| |||||| |||||||||||| ||| || ||||||||||||| |    
T  26421762 ctgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagccttacttcaaccatgcagt 26421861  T
Q  117 tccatacctgcacggcctc 135  Q
      ||||| |||||||||||    
T  26421862 ctcatacatgcacggcctc 26421880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 16811900 - 16812074
Alignment:
Q  69 ataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattca 168  Q
    |||| |||||| ||||||||||||||||| |||||||||||||| | |  ||||||| |||||| ||        | |||||| | ||||||||| ||      
T  16811900 atagatagtacaaaacaattcttataagcattccttcaaccatgtagtctcatacctacacggcatc--------tctcattctgatgtgattcggtttc 16811991  T
Q  169 tttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||||||| |||||||| ||||||||| |||  ||| ||||| ||| | |||||| |||||| ||||||||||| |||||||    
T  16811992 tttagaagccgtcgggagccgctcattggcgtgtcttgtgcaccggcaaccactccccgccctagtcagccttggatgttaca 16812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 9623320 - 9623206
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |||||| | |  ||| | |||||  |||| |||||||| |||    
T  9623320 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttctaccatggagtctcatgcatgcacaacctctggatccctctca 9623221  T
Q  149 ttccggtgtgattcg 163  Q
    ||||  |||||||||    
T  9623220 ttccattgtgattcg 9623206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 16192457 - 16192368
Alignment:
Q  23 agttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||| ||| | |||| |||  ||||||||||||||||||| |||||| ||||||||||||||||||| | ||| ||||| ||||    
T  16192457 agttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataatccttcattcaatcatg 16192368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 6585708 - 6585639
Alignment:
Q  61 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacg 130  Q
    |||||||||||||||||||||||||||| |||||||  ||| ||||| ||||||||  |||| |||||||    
T  6585708 ttgttgatataggtagtaccaaacaatttttataagtcttctttcaatcatgcaatctcatatctgcacg 6585639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 2490136 - 2490086
Alignment:
Q  64 ttgatataggtagtaccaaacaattcttataagctttccttcaaccatgca 114  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||| ||||||    
T  2490136 ttgatataggtagtaacaaacacttcttataagcattccttcaatcatgca 2490086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 33316832 - 33316759
Alignment:
Q  57 catcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacg 130  Q
    ||||||||||||||| ||| |  ||||||||||||||||  ||||||||||||||| | |  ||||||||||||    
T  33316832 catcttgttgatataagtattgtcaaacaattcttataatttttccttcaaccatgtagtctcatacctgcacg 33316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2189554 - 2189510
Alignment:
Q  207 tgcactggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||    
T  2189554 tgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 2189510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 37672296 - 37672064
Alignment:
Q  25 ttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacc 124  Q
    ||||||||||||  ||||  ||| ||||| |||||||||||| || | |||||||||||||||| |||||| | ||  | |||||||||| |   |||||    
T  37672296 ttcttatgaaatcaactaacaaaaagaagttgcatcttgttggtacaagtagtaccaaacaattattataaacctttttgcaaccatgcagtcttatacc 37672197  T
Q  125 tgcacggcctcgggatccctatcattccggtgtg-attcgattcatt-----tagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgat 218  Q
    |||||||  |   || |||| |||||  | |||| ||||| ||| ||     |||||| ||||  ||| ||||||||||| | ||||| |||||| | ||    
T  37672196 tgcacggtgtgatgacccctctcattatgatgtgaattcgtttcttttttcctagaagatgtcatgagccgctcattgtcatgccttacgcactgacaat 37672097  T
Q  219 cactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| |||||||||||| | ||||||||||||    
T  37672096 cactcatcgccctcgtcaacattgggtgttaca 37672064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 11373042 - 11372926
Alignment:
Q  18 tgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaatt 117  Q
    |||| ||||||||||   ||| |||| ||| ||||||  |||||||||| ||||| || ||  |||||||||||| |||  ||| ||||||||||||||     
T  11373042 tgtgtagttcttatggtttaggctacgaaaaagaagactcatcttgttggtatagatactatgaaacaattcttacaagtcttcattcaaccatgcaatc 11372943  T
Q  118 ccatacctgcacggcct 134  Q
     ||||||| || |||||    
T  11372942 tcatacctacatggcct 11372926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 4705 - 4469
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||| ||||   ||||  || ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |    
T  4705 ctgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccatgcagt 4606  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     ||||||||||| |||||| ||| |||| || ||||| ||||||||| ||| | ||||||||||| |||| ||||||||||||| |||| ||||| ||||    
T  4605 cccatacctgcatggcctcaggaaccctctccttccgatgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcg 4506  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaat 253  Q
      |||||||||||||||||||||||||||||||||||    
T  4505 gccactcctcgccctcgtcagccttgggtgttacaat 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 5165 - 4926
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttat-----aagctttccttcaaccat 111  Q
    ||||||||||||||||||||   ||||  || ||||||||||||||||| ||||||||||||||||||||||||| |     || | |||||||||||||    
T  5165 ctgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttctcttttaaaccttccttcaaccat 5066  T
Q  112 gcaattccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcac 211  Q
    ||| | ||||||||||| |||||| ||| |||| |||||||||||||||||| ||| | |||||| |||| |||| |||| |||||||| |||| |||||    
T  5065 gcagtcccatacctgcatggcctcaggaaccctctcattccggtgtgattcggttcctctagaagttgtcaggagccgctaattgtcgtgccttgtgcac 4966  T
Q  212 tggcgatcactcctcgccctcgtcagccttgggtgttaca 251  Q
     ||||| ||||||||||||||||||||||| |||||||||    
T  4965 cggcgaccactcctcgccctcgtcagccttaggtgttaca 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 2886 - 2651
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  2886 ctgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagt 2787  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| ||||||||| |||||||| ||||| || ||||||||||||| | |||||| ||||||||| | ||||||||||| |||| ||| | ||||    
T  2786 cccatacctacacggcctcaggatccctctcatttcgatgtgattcgattcctctagaagttgtcgggagccactcattgtcgtgccttgtgctccggcg 2687  T
Q  217 atcactcctcgccctcgtcagccttgggtgttacaa 252  Q
    | |||||| |||||||||||||||||||||||||||    
T  2686 accactccccgccctcgtcagccttgggtgttacaa 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 48 - 251
Target Start/End: Complemental strand, 23786 - 23583
Alignment:
Q  48 gagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||  || |||| ||    
T  23786 gagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctc 23687  T
Q  148 attccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctcgccctcgtcagccttgggtgt 247  Q
    ||| |||||||||||| ||| | |||| ||  || |||| ||||||||||||| |||| ||||| ||||| || ||| ||||||||||||||||||||||    
T  23686 atttcggtgtgattcggttcctctagatgccatcaggagccgctcattgtcgtgccttgtgcaccggcgaccattccccgccctcgtcagccttgggtgt 23587  T
Q  248 taca 251  Q
    ||||    
T  23586 taca 23583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 115; Significance: 4e-58; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 154901 - 154668
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||| | |    
T  154901 ctgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaaccatgtagt 154802  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| || |||||| ||| |||| ||||||||| |||||||| ||| | |||||||||||| ||| ||||||||||||| |||| ||||| ||||    
T  154801 cccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcgagagccgctcattgtcgtgccttgtgcaccggcg 154702  T
Q  217 atcactcctcgccctcgtcagccttgggtgttaca 251  Q
    | |||||| ||||||| ||||||||||||||||||    
T  154701 a-cactccccgccctcatcagccttgggtgttaca 154668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 151681 - 151550
Alignment:
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| |||||| | ||||| ||| |||||||| ||| | |||||||||||| ||  ||||||||||||| |||| ||||| |||||    
T  151681 ccatacctacaaggcctcaggatcc-tctcatttcggcgtgattcggttcctctagaagctgtcgagac-cgctcattgtcgtgccttgtgcaccggcga 151584  T
Q  218 tcactcctcgccctcgtcagccttgggtgttacaa 252  Q
     |||||| ||||||||||||| |||||||||||||    
T  151583 -cactccccgccctcgtcagcattgggtgttacaa 151550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 26 - 249
Target Start/End: Original strand, 3993 - 4207
Alignment:
Q  26 tcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacct 125  Q
    |||||| |||| | |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  126 gcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcct 225  Q
    ||||||||||||||||||| |||||| |||||||||| ||  || |||||| ||| ||||||||||||| ||||| ||          |||| ||||||     
T  4093 gcacggcctcgggatccctctcattctggtgtgattcaatagatctagaagttgttgggagtcgctcatagtcgtgcc---------agcgaccactccc 4183  T
Q  226 cgccctcgtcagccttgggtgtta 249  Q
    ||||||||||||||||||||||||    
T  4184 cgccctcgtcagccttgggtgtta 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 96; Significance: 8e-47; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 17 - 224
Target Start/End: Original strand, 17600 - 17807
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||||| |   |||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  17600 ctgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgtagt 17699  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcg 216  Q
     |||||||| ||||||||| |||||||| |||||| | ||| ||||| ||| |  ||||| ||||||||| ||||||||||||| |||  ||||| ||||    
T  17700 cccatacctacacggcctcaggatccctctcattctgatgtcattcggttcctcaagaagttgtcgggagccgctcattgtcgtgcctggtgcaccggcg 17799  T
Q  217 atcactcc 224  Q
    | ||||||    
T  17800 accactcc 17807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 18137 - 18319
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   |||| ||| | |||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| ||| | |    
T  18137 ctgtggagttcttatggaattagctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaactatgtagt 18235  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgt 200  Q
      ||||||| ||||||||| |||||||| |||||||| ||||||||  ||| | |||||||||||||||| |||||||||||||    
T  18236 cacatacctacacggcctcaggatccctctcattccgatgtgattcagttcctctagaagctgtcgggagccgctcattgtcgt 18319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 17819 - 17916
Alignment:
Q  155 tgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcgatcactcctc-gccctcgtcagccttgggtgttaca 251  Q
    ||||||||| ||| | |||||||||||||||| ||||||||||||| |||  ||||| ||||| |||||| |  |||||||||||| |||||||||||    
T  17819 tgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgcctcgtgcaccggcgaccactccccttccctcgtcagccgtgggtgttaca 17916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 19110 - 18966
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||||||   ||||  || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  19110 ctgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 19011  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
     |||||||||||||||||| |||||||| |||||||| |||||||    
T  19010 cccatacctgcacggcctctggatccctctcattccgatgtgatt 18966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 18205 - 18268
Alignment:
Q  99 ttccttcaaccatgcaattccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||||||||||| | |||||||||||||||||| |||||||| |||||||| ||||||||    
T  18205 ttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattc 18268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 2053 - 2199
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  2053 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagt 2152  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattcg 163  Q
      ||||||||||||||||| ||| |||| |||||| |||||||||||    
T  2153 ctcatacctgcacggcctcaggaaccctttcattctggtgtgattcg 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 105864 - 105720
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |    
T  105864 ctgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagccttccttcaaccctgcagt 105765  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgatt 161  Q
    |||||||||| |||||||| |||||||| |||||||| |||||||    
T  105764 tccatacctgtacggcctcaggatccctctcattccgatgtgatt 105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 142308 - 142421
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | | |||||||||||||||||| |||||||| |||    
T  142308 agaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctctca 142407  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  142408 ttccgatgtgattc 142421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 2217 - 2357
Alignment:
Q  22 gagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccat 121  Q
    ||||||||||| ||||  ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||    
T  2217 gagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccat 2316  T
Q  122 acctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
    |||||||||||||  |||||| | |||||||| ||||||||    
T  2317 acctgcacggccttaggatccttctcattccgatgtgattc 2357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 107465 - 107610
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |    
T  107465 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagccttccttcaaccatgcagt 107564  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     ||||||||| |||||||| | |||||| |||||||| ||||||||    
T  107565 cccatacctgtacggcctcagaatccctctcattccgatgtgattc 107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 10444 - 10299
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||||  || | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |    
T  10444 ctgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaaccatgcagt 10345  T
Q  117 tccatacctgcacggcctcgggatccctatcattccggtgtgattc 162  Q
     |||||| ||||||||||| |||||||| |||||||| ||||||||    
T  10344 cccatacatgcacggcctcaggatccctctcattccgatgtgattc 10299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 245198 - 245085
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | | |||||||| || |||||| |||||||| |||    
T  245198 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctca 245099  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||||||||    
T  245098 ttccgatgtgattc 245085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 245659 - 245526
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    ||||||||||||||||   ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |    
T  245659 ctgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagt 245560  T
Q  117 tccatacctgcacggcctcgggatccctatcatt 150  Q
     |||||||| ||||| |||  ||||||| |||||    
T  245559 cccatacctacacggactcaagatccctttcatt 245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 162712 - 162825
Alignment:
Q  49 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaattccatacctgcacggcctcgggatccctatca 148  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |  |||||||| |||||||| |||||||| |||    
T  162712 agaagatgcatcttgttaatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcacatacctgtacggcctcaggatccctctca 162811  T
Q  149 ttccggtgtgattc 162  Q
    ||||| ||| ||||    
T  162812 ttccgatgtaattc 162825  T

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Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 69817 - 69928
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcaat 116  Q
    |||||||||||||||| |||   ||| | || | |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |    
T  69817 ctgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgcagt 69916  T
Q  117 tccatacctgca 128  Q
      ||||||||||    
T  69917 ctcatacctgca 69928  T

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Target: scaffold0557 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 2249 - 2154
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatg 112  Q
    |||||||||||||| | ||| | |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2249 ctgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaaccatg 2154  T

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Target: scaffold0557; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 118 - 251
Target Start/End: Complemental strand, 793 - 660
Alignment:
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| |||||||| |||||||| ||||||||| ||| | || ||| ||||||||| |||||||||||||||||| |||||  |||     
T  793 ccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctctataagttgtcgggagccgctcattgtcgtaccttgtgcaccagcgg 694  T
Q  218 tcactcctcgccctcgtcagccttgggtgttaca 251  Q
    ||||||| |  ||||||||||||| |||||||||    
T  693 tcactcccctgcctcgtcagccttaggtgttaca 660  T

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Target: scaffold0442 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 118 - 251
Target Start/End: Complemental strand, 2548 - 2414
Alignment:
Q  118 ccatacctgcacggcctcgggatccctatcattccggtgtgattcgattcatttagaagctgtcgggagtcgctcattgtcgtaccttatgcactggcga 217  Q
    |||||||| || |||||| |||||||| |||||| | ||||||||| ||| | || ||| | ||||||| ||||||||||||| |||| ||||| |||||    
T  2548 ccatacctacatggcctcaggatccctctcattctgatgtgattcggttcctctataagttttcgggagccgctcattgtcgtgccttgtgcaccggcga 2449  T
Q  218 tcact-cctcgccctcgtcagccttgggtgttaca 251  Q
    ||||| ||| ||||| ||||||||| |||||||||    
T  2448 tcactcccttgcccttgtcagccttaggtgttaca 2414  T

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Target: scaffold0391 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 14849 - 14794
Alignment:
Q  53 gatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaac 108  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  14849 gatgcatcttattgatataggtattaccaaacaattcttataagcattccttcaac 14794  T

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Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 45497 - 45439
Alignment:
Q  50 gaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaac 108  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||  ||||||||||    
T  45497 gaagatacatcttgttgatataggtagtaccaaataattctcataagtcttccttcaac 45439  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 26211 - 26134
Alignment:
Q  20 tggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 97  Q
    |||||||||||| ||||   |||| ||| |||||||||||| |||||||||| ||||||||||| ||||  |||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaatttgtataagc 26134  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 13535 - 13593
Alignment:
Q  17 ctgtggagttcttatgaaatagactactaaagagaagatgcatcttgttgatataggta 75  Q
    |||||||||||||||| |||   ||||  || |||||||||||||||||||||||||||    
T  13535 ctgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggta 13593  T

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