View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11968_low_10 (Length: 254)
Name: NF11968_low_10
Description: NF11968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11968_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 37001948 - 37002113
Alignment:
| Q |
1 |
gatttcttctgatcatgaaatttcattttgtcaattttgtttcttaattatcaagtttctaactcagaggtgtcataatttgataacaataaactattct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37001948 |
gatttcttctgatcatgaaatttcattttgtcaattttgtttcttaattatgaactttctaactcagcggtgtcataatttgataacaataaactattct |
37002047 |
T |
|
| Q |
101 |
actacatgaatttataagacgatgttgctctaatccatcaatttatcgaaactgcaaaaatttccc |
166 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37002048 |
actacatgaatgtataagacgatgttgctctaatccatcaatttatcgaaactgcaaaaatttccc |
37002113 |
T |
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