View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11968_low_15 (Length: 238)
Name: NF11968_low_15
Description: NF11968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11968_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37001828 - 37001606
Alignment:
| Q |
1 |
aacatcttttttgtcaacaaggtccatatcaaagagatgggagaaagacttacaatcaagaactgcaatgatgttaggattaacgttggtgaagaaaggg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37001828 |
aacatcttttttgtcaacaaggtccatatcaaagagatgggagaaagacttacaatcaagaactgcaatgatgttaggattaacgttggtgaagaaaggg |
37001729 |
T |
|
| Q |
101 |
aacgtgggtggaacattggtacggaacacagtacttttgtacttgtccattcgtgttctgaagaagttttctggcttctggaaccagaaataatctaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37001728 |
aacgtgggtggaacattggtacggaacacagtacttttgtacttgtccattcgtgttctgaagaagttttctggcttctggaaccagaaataatctaacc |
37001629 |
T |
|
| Q |
201 |
tgtctgataagggacctagcaac |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
37001628 |
tgtctgataagggacctagcaac |
37001606 |
T |
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