View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11968_low_3 (Length: 572)
Name: NF11968_low_3
Description: NF11968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11968_low_3 |
 |  |
|
| [»] scaffold0115 (1 HSPs) |
 |  |  |
|
| [»] scaffold0075 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 422; Significance: 0; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 557
Target Start/End: Complemental strand, 40496254 - 40495696
Alignment:
| Q |
1 |
attgatgtattcataatattcatttcacaccacatgcatcatattagaaacttccaaccaattttatannnnnnnnnatnnnnnnntgaaattgaaccga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
40496254 |
attgatgtattcataatattcatttcacaccacatgcatcatattagaaacttccaaccaattttatatttttttt-ataaaaaaatgaaattgaaccga |
40496156 |
T |
 |
| Q |
101 |
aaattttacatgaacgatattattttcttaaaattgaatacattctagcagtcaaaaattaattatgatccactgannnnnnnnnnnnn---gagtaaat |
197 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
40496155 |
atattttacatgaacgatattattttcttaaaattgaatacattctagcagtcaaaaattaattatgatccactgatttttattttttttttgagtacat |
40496056 |
T |
 |
| Q |
198 |
gatccagtgaattattatttttcaaggaaaaaatatatatacatatgctccttttctattcataagtaatggattcatcgccatgttagataagcagtgt |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40496055 |
gatccagtgaattattatttttcaaggaaaaaatatatatacatatgctccttttctattcataagtaatggattcatcgccatgttagataagcagtgt |
40495956 |
T |
 |
| Q |
298 |
acttgatagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattcagaaattaattgatatgtttc |
397 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
40495955 |
atttgatagcttatatcaattaaaatttcacataaaagtttctttcatctgaatatccttaaatctaacaattatattcagaaattaattgatatgtttc |
40495856 |
T |
 |
| Q |
398 |
ttgcattccagaatgtgaatcaaaactcatccccttcattccaatttcttcatatacttgttttatcactttcttcgtctttcttcttatgattgccatc |
497 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40495855 |
ttgcattccagaatgtgaatccaaactcatccccttcattccaatttcttcatatacttgttttatcactttcttcgtctttcttcttatgattgccatc |
40495756 |
T |
 |
| Q |
498 |
gatttttattgccaatccaaaagtatctccttctttccaatcgcatctcttcgttctctg |
557 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40495755 |
gatttttattgtcaatccaaaagtatctccttctttccaatcgtatctcttcgttctctg |
40495696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 43339235 - 43339173
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||||||||||||||| || ||||||||| |
|
|
| T |
43339235 |
caattaaaatttcacatcaaa-tttctttcatctgaatatccttaaatttatcagttatattca |
43339173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 50610317 - 50610255
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |||||||||||| |
|
|
| T |
50610317 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcaattatattca |
50610255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 22605746 - 22605678
Alignment:
| Q |
308 |
ttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
22605746 |
ttataacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
22605678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 2218869 - 2218807
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
2218869 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
2218807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 16464797 - 16464735
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
16464797 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
16464735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 18411094 - 18411032
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
18411094 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
18411032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 18762811 - 18762749
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
18762811 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
18762749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 27127056 - 27126994
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
27127056 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
27126994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27324855 - 27324917
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
27324855 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
27324917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 30042660 - 30042722
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
30042660 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
30042722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 31312800 - 31312862
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
31312800 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
31312862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 44842367 - 44842429
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
44842367 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
44842429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 40470078 - 40470036
Alignment:
| Q |
19 |
ttcatttcacaccacatgcatcatattagaaacttccaaccaa |
61 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
40470078 |
ttcatttcacaccacatgcattacattagaaacttccaaccaa |
40470036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 40907015 - 40906954
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
40907015 |
aattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
40906954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 47912130 - 47912191
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
47912130 |
aattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
47912191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 11122490 - 11122418
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | |||||||||||||| || ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
11122490 |
tagcttagaacaattaaaatttcatatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
11122418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 4232094 - 4232156
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||| ||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
4232094 |
caattaaaagttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
4232156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 10826903 - 10826965
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||| |||||| ||| ||| ||||||||||||||||||||||||||||| || ||| ||||| |
|
|
| T |
10826903 |
caattataatttcgcatcaaa-tttcttttatctgaatatccttaaatttatcagttacattca |
10826965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 16009667 - 16009605
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| |||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
16009667 |
caattaaaattttacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
16009605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27331092 - 27331154
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| | |||||||||| || ||||||||| |
|
|
| T |
27331092 |
caattaaaatttcacatcaaa-tttctttcatctgaatgttcttaaatttatcagttatattca |
27331154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 30439491 - 30439553
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||| || ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
30439491 |
caattaaaatttcatatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
30439553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 37219371 - 37219433
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| || ||||||||| || ||||||||| |
|
|
| T |
37219371 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtcattaaatttatcagttatattca |
37219433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 38236397 - 38236335
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| | ||||||||| |
|
|
| T |
38236397 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatctgttatattca |
38236335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 45170869 - 45170807
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| | ||||||||| |
|
|
| T |
45170869 |
caattaaaatttcacatcaaa-tttctttcatctgaatttccttaaatttattagttatattca |
45170807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 51721978 - 51722040
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
51721978 |
caattaaaatttcacattaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
51722040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 55412091 - 55412029
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
55412091 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcatttacattca |
55412029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 37786290 - 37786241
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaattta |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |
|
|
| T |
37786290 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattta |
37786241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 50547652 - 50547701
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaattta |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |
|
|
| T |
50547652 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattta |
50547701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 23020665 - 23020597
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattcagaaatt |
383 |
Q |
| |
|
|||||||||||||| || ||| |||| || |||||||| |||||||||||| || ||||||||| ||||| |
|
|
| T |
23020665 |
caattaaaatttcatatcaaa-tttcattcatctgaatgtccttaaatttatcagttatattcataaatt |
23020597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 22847 - 22777
Alignment:
| Q |
306 |
gcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
22847 |
gcttataacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
22777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 40303524 - 40303596
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
40303524 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
40303596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 277635 - 277573
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
277635 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
277573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 638214 - 638276
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
638214 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
638276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 824020 - 824082
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
824020 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
824082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 18956352 - 18956290
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
18956352 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
18956290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 23346325 - 23346395
Alignment:
| Q |
306 |
gcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||||| | |||||| |||||||||||| || ||||||||| |
|
|
| T |
23346325 |
gcttataacaattaaaatttcacatcaaa-tttctttcacctgaatgtccttaaatttatcagttatattca |
23346395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 26950016 - 26950078
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
26950016 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
26950078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 30555852 - 30555914
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
30555852 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
30555914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 38060411 - 38060473
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
38060411 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
38060473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 39858889 - 39858827
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
39858889 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
39858827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 43694330 - 43694392
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
43694330 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
43694392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 13140478 - 13140540
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||| || |||||||||||| || ||||||||| |
|
|
| T |
13140478 |
caattaaaatttcacatcaaa-tttctttcatctggatgtccttaaatttatcagttatattca |
13140540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 27913295 - 27913233
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||| || ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
27913295 |
caattaaaatttcatatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
27913233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 27959714 - 27959652
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||| || ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
27959714 |
caattaaaatttcatatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
27959652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 30111636 - 30111574
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| ||||||| |||| || ||||||||| |
|
|
| T |
30111636 |
caattaaaatttcacatcaaa-tttctttgatctgaatgtccttaagtttatcatttatattca |
30111574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 36192330 - 36192268
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| || |||||||||||||||||| | ||||||||| |
|
|
| T |
36192330 |
caattaaaatttcacatcaaa-tttctttcatatgaatatccttaaatttatcggttatattca |
36192268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 41545738 - 41545676
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||| | || ||||||||| |
|
|
| T |
41545738 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattaatcagttatattca |
41545676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 42646226 - 42646164
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
42646226 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
42646164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 42736485 - 42736423
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| || ||||||||| || ||||||||| |
|
|
| T |
42736485 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtctttaaatttatcagttatattca |
42736423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 373
Target Start/End: Complemental strand, 44256993 - 44256935
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattata |
373 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||| |
|
|
| T |
44256993 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttata |
44256935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 45408395 - 45408457
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
45408395 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
45408457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 20545360 - 20545432
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
20545360 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
20545432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 744757 - 744827
Alignment:
| Q |
306 |
gcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
744757 |
gcttataacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
744827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 15421196 - 15421134
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
15421196 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
15421134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 19665806 - 19665744
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
19665806 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
19665744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 30130116 - 30130178
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
30130116 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
30130178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 13304618 - 13304678
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatatt |
375 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||| |
|
|
| T |
13304618 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatatt |
13304678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 824003 - 824065
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| | |||||||||| || ||||||||| |
|
|
| T |
824003 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtacttaaatttatcagttatattca |
824065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 9592653 - 9592591
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| |||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
9592653 |
caattaaaattttacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
9592591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 11985501 - 11985439
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
11985501 |
caattaaaatttcacatcaaa-tttatttcatctgaatttccttaaatttatcagttatattca |
11985439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 12500253 - 12500191
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||| |||| |||||||||||| || ||||||||| |
|
|
| T |
12500253 |
caattaaaatttcacatcaaa-tttctttcatccgaatgtccttaaatttatcagttatattca |
12500191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27019293 - 27019355
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
27019293 |
caattaaaatttcacatcaaa-tttatttcatctgaatgtccttaaatttatcagttatattca |
27019355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 27551636 - 27551574
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
27551636 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
27551574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 37271270 - 37271208
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||| ||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
37271270 |
caattaaaatttcgcatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
37271208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 37939651 - 37939723
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| ||||||| | |||||||||| || ||||||||| |
|
|
| T |
37939651 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaacgttcttaaatttatcagttatattca |
37939723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 7153785 - 7153713
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
7153785 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
7153713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 10773586 - 10773524
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
10773586 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
10773524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 36308697 - 36308635
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
36308697 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
36308635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 51087580 - 51087518
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
51087580 |
caattaaaatttcacatcaaa-tttctttaatctgaatgtccttaaatttatcagttatattca |
51087518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 44511584 - 44511645
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
44511584 |
aattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttaccagttatattca |
44511645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 14487976 - 14488038
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
14487976 |
caattaaattttcacatcaaa-tttctttaatctgaatgtccttaaatttatcagttatattca |
14488038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 14536565 - 14536627
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
14536565 |
caattaaattttcacatcaaa-tttctttaatctgaatgtccttaaatttatcagttatattca |
14536627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 33705455 - 33705393
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| |||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
33705455 |
caattaaaattttacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
33705393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 35955279 - 35955217
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||| |||||||||||| || ||||||||| |
|
|
| T |
35955279 |
caattaaaatttcacatcaaa-tttctttcttctgaatgtccttaaatttatcagttatattca |
35955217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 36731520 - 36731464
Alignment:
| Q |
320 |
aaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
36731520 |
aaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
36731464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 52405445 - 52405389
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaatta |
371 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| |||||||| |||||||||||| |||||| |
|
|
| T |
52405445 |
caattcaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcaatta |
52405389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 52406878 - 52406822
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaatta |
371 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| |||||||| |||||||||||| |||||| |
|
|
| T |
52406878 |
caattcaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcaatta |
52406822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 29648717 - 29648772
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaatt |
370 |
Q |
| |
|
||||||||||||||||| |||| |||||| || ||||| |||||||||||| ||||| |
|
|
| T |
29648717 |
caattaaaatttcacatcaaag-ttctttcatttgaatgtccttaaatttatcaatt |
29648772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 724658 - 724720
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
724658 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
724720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 3415278 - 3415340
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
3415278 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
3415340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 16274397 - 16274459
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
16274397 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
16274459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 20120882 - 20120820
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
20120882 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
20120820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 21816259 - 21816197
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
21816259 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
21816197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 28588739 - 28588801
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
28588739 |
caattaaaatttcacatcaaa-tttctttcatctgaatttccttaaatttatcagttatattca |
28588801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 40014812 - 40014874
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
40014812 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
40014874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 41337161 - 41337099
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
41337161 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
41337099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 41857778 - 41857840
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
41857778 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
41857840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 48606747 - 48606809
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||||||||| |||||||||||| || ||||||||| |
|
|
| T |
48606747 |
caattaaaatttgacatcaaa-tttcttttatctgaatgtccttaaatttatcagttatattca |
48606809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 5373667 - 5373729
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| || ||||| |||||||||||| || ||||||||| |
|
|
| T |
5373667 |
caattaaaatttcacatcaaa-tttctttcatgtgaatgtccttaaatttatcagttatattca |
5373729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 30759211 - 30759273
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
30759211 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
30759273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 44521220 - 44521282
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
44521220 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
44521282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 48684119 - 48684057
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||| |||| |||||||||||| || ||||||||| |
|
|
| T |
48684119 |
caattaaaatttcacatcaaa-tttctttcatccgaatgtccttaaatttatcagttatattca |
48684057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 48951407 - 48951469
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| || ||||||||| || ||||||||| |
|
|
| T |
48951407 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtcattaaatttatcagttatattca |
48951469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 548
Target Start/End: Complemental strand, 10934545 - 10934464
Alignment:
| Q |
460 |
ttatcactttcttcgtctttcttcttatgattgccatcgatttttattgccaatccaaaagtatctccttctttccaatcgcatctctt |
548 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
10934545 |
ttatcactttcttcttctttcttgttgcaattgccatcgat-------gccaatccaaaagtatctccttcatttcaattgcatctctt |
10934464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 33245765 - 33245826
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| ||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
33245765 |
aattaaaatttcccatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
33245826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 377
Target Start/End: Original strand, 46554627 - 46554684
Alignment:
| Q |
319 |
aaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
46554627 |
aaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
46554684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 46935411 - 46935460
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaattta |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |
|
|
| T |
46935411 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattta |
46935460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 47504488 - 47504439
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaattta |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |
|
|
| T |
47504488 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattta |
47504439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 47908133 - 47908193
Alignment:
| Q |
316 |
attaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
47908133 |
attaaaatttcacatcaaatttt-tttcatctgaatgtccttaaatttatcagttatattca |
47908193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 954803 - 954865
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||||||| |||||||||||| || ||||||||| |
|
|
| T |
954803 |
caattaaaatttcacatcaaa-tttattttatctgaatgtccttaaatttatcagttatattca |
954865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 5687487 - 5687549
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
5687487 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
5687549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 11153849 - 11153911
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
11153849 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
11153911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 14104830 - 14104768
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
14104830 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
14104768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 28579442 - 28579380
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
28579442 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
28579380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 11836807 - 11836879
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| |||||||| | |||||||||| || ||||||||| |
|
|
| T |
11836807 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgttcttaaatttatcagttatattca |
11836879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 16919021 - 16918949
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| |||||||| | |||||||||| || ||||||||| |
|
|
| T |
16919021 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgttcttaaatttatcagttatattca |
16918949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 27783315 - 27783253
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| | |||||| |||||||||||| || ||||||||| |
|
|
| T |
27783315 |
caattaaaatttcacatcaaa-tttctttcaactgaatgtccttaaatttatcagttatattca |
27783253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 23573923 - 23573851
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| ||||||| ||||||| | |||||||||| || ||||||||| |
|
|
| T |
23573923 |
tagcttagaacaattaaaatttcacatcaaa-tttctttcatctgaaagtacttaaatttatcagttatattca |
23573851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 3035000 - 3035062
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
3035000 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
3035062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 4653833 - 4653771
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
4653833 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
4653771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 16665521 - 16665459
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
16665521 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
16665459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 17361963 - 17361901
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
17361963 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcacttatattca |
17361901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 20786278 - 20786340
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
20786278 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
20786340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 23418489 - 23418551
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
23418489 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
23418551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27958668 - 27958730
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| ||||||||||| |
|
|
| T |
27958668 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttataaattatattca |
27958730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 35825406 - 35825344
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
35825406 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
35825344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 46718579 - 46718517
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
46718579 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
46718517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 52448250 - 52448188
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
52448250 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
52448188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 54920260 - 54920198
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
54920260 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
54920198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 41040732 - 41040793
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
41040732 |
aattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
41040793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 20342526 - 20342588
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
20342526 |
caattaaaatttcacatcaaa-tttatttcatctgaatgtccttaaatttatcagttatattca |
20342588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 20353251 - 20353313
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
20353251 |
caattaaaatttcacatcaaatttt-tttcatctgaatgtccttaaatttatcagttatattca |
20353313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 31291871 - 31291933
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| ||||||||| || || ||||||||| |
|
|
| T |
31291871 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatctatcagttatattca |
31291933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 35045831 - 35045769
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
35045831 |
caattaaaatttcacatcaaa-tttatttcatctgaatgtccttaaatttatcagttatattca |
35045769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 9368076 - 9368125
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaattta |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| |
|
|
| T |
9368076 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaattta |
9368125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 34073885 - 34073813
Alignment:
| Q |
304 |
tagcttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||| | ||||||||||| ||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
34073885 |
tagcttagaacaattaaaattacacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
34073813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 76806 - 76868
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
76806 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
76868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 4737407 - 4737469
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
4737407 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
4737469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 15153428 - 15153366
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
15153428 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
15153366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 28391123 - 28391185
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
28391123 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
28391185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 37724681 - 37724743
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
37724681 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
37724743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 38281437 - 38281499
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
38281437 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttatattca |
38281499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 2291462 - 2291531
Alignment:
| Q |
307 |
cttatatcaattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||| ||||||||||||||||| ||| || |||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
2291462 |
cttataacaattaaaatttcacatcaaa-ttcctttcatctgaatgtccttaaatttatcagttatattca |
2291531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 1054312 - 1054374
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| ||||| |||||| || ||||||||| |
|
|
| T |
1054312 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttgaatttatcagttatattca |
1054374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 15399853 - 15399791
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| |||||||| |||||||||||| || ||||||||| |
|
|
| T |
15399853 |
caattaaaatttcacatcaaatttt-tttcatctgaatgtccttaaatttatcagttatattca |
15399791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27550784 - 27550846
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
27550784 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
27550846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 39068174 - 39068236
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| || ||||| |||||||||||| || ||||||||| |
|
|
| T |
39068174 |
caattaaaatttcacattaaa-tttctttcatttgaatgtccttaaatttatcagttatattca |
39068236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 3906081 - 3906142
Alignment:
| Q |
315 |
aattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
|||||||||||||||| ||| ||||||| |||||| | |||||||||||| || ||||||||| |
|
|
| T |
3906081 |
aattaaaatttcacatcaaa-tttctttcatctgattgtccttaaatttatcagttatattca |
3906142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 38552133 - 38552174
Alignment:
| Q |
420 |
aaactcatccccttcattccaatttcttcatatacttgtttt |
461 |
Q |
| |
|
|||| |||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
38552133 |
aaacacatccccttcgttctaatttcttcatatacttgtttt |
38552174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 18474 - 18536
Alignment:
| Q |
314 |
caattaaaatttcacataaaagtttcttttatctgaatatccttaaatttaacaattatattca |
377 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || ||| ||||| |
|
|
| T |
18474 |
caattaaaatttcacatcaaa-tttctttcatctgaatgtccttaaatttatcagttacattca |
18536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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