View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11970_low_10 (Length: 230)
Name: NF11970_low_10
Description: NF11970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11970_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 46157163 - 46156963
Alignment:
| Q |
14 |
gagaagaaagcttgcagaagaagaggcgtgaaggacttcaacctcagcagatacctgcatcagttcaatctaatctactcgagaaaaaggtctagattct |
113 |
Q |
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| T |
46157163 |
gagaagaaagcttgcagaagaagaggcgtgaaggacttcaacctcagcagatgcctgcatcagttcaatctaatctactcgagaaaaaggtctagattct |
46157064 |
T |
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| Q |
114 |
tttgatctcactactttacgtgttctttccgattttctttttcttttattaattaattacttccatacttgtttaattgtgaaattgatagtagtggtta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46157063 |
tttgatctcactactttacgtgttctttccgattttctttttcttttattaattaattacttccatacttgtttaattgtgaaattgatagtagtggtta |
46156964 |
T |
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| Q |
214 |
g |
214 |
Q |
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| T |
46156963 |
g |
46156963 |
T |
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