View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11971_low_2 (Length: 659)

Name: NF11971_low_2
Description: NF11971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11971_low_2
NF11971_low_2
[»] chr5 (39 HSPs)
chr5 (24-381)||(39097120-39097465)
chr5 (483-655)||(39097460-39097623)
chr5 (148-240)||(31906257-31906349)
chr5 (92-207)||(18637226-18637341)
chr5 (145-240)||(42858103-42858198)
chr5 (148-240)||(6951300-6951392)
chr5 (248-323)||(14299423-14299498)
chr5 (148-239)||(18851078-18851169)
chr5 (148-241)||(28031168-28031260)
chr5 (148-247)||(9818732-9818832)
chr5 (92-132)||(10957385-10957425)
chr5 (152-352)||(35108241-35108440)
chr5 (61-136)||(3043121-3043196)
chr5 (92-135)||(12404997-12405040)
chr5 (160-241)||(2937913-2937994)
chr5 (107-168)||(25548457-25548518)
chr5 (59-120)||(38845644-38845705)
chr5 (92-183)||(7328691-7328783)
chr5 (92-136)||(16293999-16294043)
chr5 (148-207)||(11648080-11648139)
chr5 (153-224)||(15368376-15368447)
chr5 (92-325)||(23647565-23647798)
chr5 (92-325)||(23810775-23811008)
chr5 (61-132)||(35108132-35108203)
chr5 (59-141)||(2090138-2090220)
chr5 (287-329)||(13102490-13102531)
chr5 (248-325)||(19784868-19784946)
chr5 (153-239)||(36639940-36640026)
chr5 (158-215)||(24306116-24306173)
chr5 (158-215)||(24367143-24367200)
chr5 (107-136)||(29922833-29922862)
chr5 (259-320)||(29923008-29923069)
chr5 (148-240)||(38845441-38845534)
chr5 (72-136)||(10898626-10898690)
chr5 (191-239)||(10898762-10898810)
chr5 (175-215)||(15955375-15955415)
chr5 (287-323)||(16017346-16017382)
chr5 (153-241)||(22226230-22226318)
chr5 (92-132)||(37019604-37019644)
[»] chr8 (35 HSPs)
chr8 (153-326)||(32927895-32928067)
chr8 (61-348)||(32994128-32994416)
chr8 (153-309)||(35494993-35495148)
chr8 (108-329)||(18355756-18355975)
chr8 (60-224)||(15677826-15677991)
chr8 (145-310)||(26100072-26100236)
chr8 (147-320)||(4662823-4662991)
chr8 (259-350)||(7602014-7602105)
chr8 (229-350)||(10368044-10368164)
chr8 (148-236)||(13384653-13384741)
chr8 (58-136)||(38868664-38868742)
chr8 (110-323)||(38335775-38335986)
chr8 (148-224)||(38868496-38868572)
chr8 (61-132)||(36448007-36448078)
chr8 (160-294)||(16972006-16972139)
chr8 (262-323)||(13418737-13418798)
chr8 (227-323)||(9461452-9461546)
chr8 (63-135)||(39648263-39648335)
chr8 (273-323)||(26559864-26559914)
chr8 (249-329)||(18123324-18123404)
chr8 (176-224)||(20854398-20854446)
chr8 (90-133)||(8252719-8252762)
chr8 (92-151)||(41614768-41614827)
chr8 (65-127)||(5218993-5219055)
chr8 (61-135)||(32100966-32101040)
chr8 (61-131)||(35495153-35495223)
chr8 (286-323)||(10026269-10026306)
chr8 (286-323)||(10223898-10223935)
chr8 (148-201)||(11572492-11572545)
chr8 (287-323)||(2206459-2206495)
chr8 (110-138)||(4336343-4336371)
chr8 (253-321)||(4336571-4336639)
chr8 (99-135)||(8182182-8182218)
chr8 (62-122)||(34732038-34732098)
chr8 (92-136)||(42455836-42455880)
[»] chr7 (21 HSPs)
chr7 (146-323)||(40491574-40491750)
chr7 (92-241)||(38123660-38123809)
chr7 (144-294)||(45557359-45557508)
chr7 (248-323)||(35105255-35105330)
chr7 (146-313)||(42344614-42344779)
chr7 (261-323)||(42481803-42481865)
chr7 (146-239)||(41386811-41386904)
chr7 (247-323)||(15019355-15019431)
chr7 (75-183)||(17111782-17111890)
chr7 (157-236)||(28725051-28725130)
chr7 (274-323)||(34536761-34536810)
chr7 (308-347)||(24954191-24954230)
chr7 (92-135)||(45004909-45004952)
chr7 (105-151)||(12306671-12306717)
chr7 (146-239)||(597942-598034)
chr7 (92-136)||(48158815-48158859)
chr7 (148-215)||(30182316-30182383)
chr7 (248-326)||(4228609-4228687)
chr7 (287-329)||(31331283-31331325)
chr7 (153-203)||(37277597-37277647)
chr7 (63-132)||(29339240-29339309)
[»] chr1 (31 HSPs)
chr1 (157-326)||(7524120-7524288)
chr1 (154-326)||(32369941-32370112)
chr1 (61-242)||(3134725-3134906)
chr1 (148-241)||(1514341-1514434)
chr1 (105-241)||(11049205-11049341)
chr1 (148-294)||(28083831-28083975)
chr1 (148-295)||(3016160-3016304)
chr1 (57-157)||(47322002-47322102)
chr1 (171-350)||(29988322-29988504)
chr1 (153-244)||(30850390-30850481)
chr1 (63-136)||(36780234-36780307)
chr1 (263-318)||(4192587-4192642)
chr1 (92-135)||(20720741-20720783)
chr1 (62-135)||(35681824-35681897)
chr1 (274-323)||(47899376-47899425)
chr1 (145-233)||(7790644-7790732)
chr1 (61-136)||(15478118-15478193)
chr1 (284-323)||(3515940-3515979)
chr1 (248-323)||(40642994-40643069)
chr1 (63-136)||(6041587-6041660)
chr1 (145-215)||(10324958-10325028)
chr1 (94-136)||(24587835-24587877)
chr1 (61-135)||(49079332-49079406)
chr1 (286-323)||(3327790-3327827)
chr1 (153-206)||(3515821-3515874)
chr1 (248-325)||(13344838-13344915)
chr1 (180-241)||(34721834-34721895)
chr1 (153-237)||(6021807-6021891)
chr1 (110-234)||(28287337-28287461)
chr1 (107-151)||(32088675-32088719)
chr1 (158-206)||(33693029-33693077)
[»] chr4 (43 HSPs)
chr4 (148-240)||(39386631-39386723)
chr4 (146-241)||(32818364-32818459)
chr4 (61-149)||(2635056-2635144)
chr4 (64-136)||(16551853-16551925)
chr4 (145-220)||(30357507-30357582)
chr4 (146-241)||(55186958-55187051)
chr4 (113-264)||(1616354-1616503)
chr4 (61-151)||(2326913-2327003)
chr4 (146-240)||(21691207-21691301)
chr4 (261-323)||(24364105-24364167)
chr4 (63-137)||(27967952-27968026)
chr4 (61-151)||(49138937-49139027)
chr4 (148-241)||(8604616-8604709)
chr4 (160-217)||(54549376-54549433)
chr4 (148-264)||(35065061-35065176)
chr4 (61-132)||(47596416-47596488)
chr4 (153-224)||(26617471-26617542)
chr4 (148-206)||(37439143-37439201)
chr4 (247-321)||(50945390-50945464)
chr4 (146-207)||(9134606-9134667)
chr4 (147-212)||(30357644-30357709)
chr4 (151-224)||(49138774-49138847)
chr4 (179-323)||(4243416-4243560)
chr4 (287-323)||(20911812-20911848)
chr4 (67-151)||(35064962-35065046)
chr4 (146-241)||(2326805-2326900)
chr4 (149-212)||(16643977-16644040)
chr4 (280-323)||(25405719-25405762)
chr4 (274-329)||(34155816-34155871)
chr4 (63-133)||(41058821-41058891)
chr4 (258-323)||(5835786-5835851)
chr4 (153-241)||(16551960-16552046)
chr4 (64-161)||(21691312-21691409)
chr4 (258-323)||(22250333-22250398)
chr4 (200-241)||(31360950-31360991)
chr4 (145-238)||(33347167-33347260)
chr4 (61-130)||(33843584-33843653)
chr4 (274-323)||(38740287-38740336)
chr4 (92-133)||(50358134-50358175)
chr4 (277-321)||(2256126-2256170)
chr4 (148-328)||(43868134-43868313)
chr4 (161-233)||(44520486-44520558)
chr4 (92-136)||(45329770-45329814)
[»] chr3 (41 HSPs)
chr3 (148-329)||(42913052-42913232)
chr3 (153-323)||(31013021-31013190)
chr3 (61-157)||(3845208-3845304)
chr3 (144-323)||(32111988-32112166)
chr3 (148-241)||(4526130-4526223)
chr3 (61-130)||(34867309-34867378)
chr3 (154-236)||(52364055-52364137)
chr3 (153-326)||(35264321-35264493)
chr3 (61-150)||(52925714-52925803)
chr3 (157-309)||(31708166-31708317)
chr3 (171-323)||(32523247-32523404)
chr3 (185-241)||(47356239-47356295)
chr3 (259-323)||(53567984-53568048)
chr3 (92-135)||(3776463-3776506)
chr3 (61-136)||(7262791-7262866)
chr3 (258-321)||(37334949-37335012)
chr3 (65-132)||(39256572-39256639)
chr3 (61-120)||(52363958-52364017)
chr3 (62-157)||(54596712-54596807)
chr3 (113-203)||(42375488-42375578)
chr3 (113-203)||(42404202-42404292)
chr3 (147-224)||(44771691-44771768)
chr3 (171-236)||(49356392-49356457)
chr3 (227-315)||(1441328-1441415)
chr3 (248-323)||(42644303-42644379)
chr3 (61-132)||(38022330-38022401)
chr3 (62-136)||(1290675-1290749)
chr3 (61-135)||(1441499-1441573)
chr3 (285-323)||(44489653-44489691)
chr3 (61-151)||(48410914-48411004)
chr3 (61-127)||(51285452-51285518)
chr3 (61-133)||(25129641-25129714)
chr3 (146-207)||(25359602-25359663)
chr3 (180-240)||(33792000-33792061)
chr3 (148-201)||(35058065-35058118)
chr3 (54-131)||(40339071-40339148)
chr3 (220-323)||(21261223-21261324)
chr3 (275-323)||(27825292-27825340)
chr3 (259-323)||(30958145-30958209)
chr3 (259-323)||(30973957-30974021)
chr3 (287-323)||(44771864-44771900)
[»] chr2 (41 HSPs)
chr2 (108-263)||(43501083-43501235)
chr2 (258-329)||(17140666-17140737)
chr2 (145-263)||(33019129-33019246)
chr2 (144-263)||(13912781-13912899)
chr2 (59-131)||(36374207-36374279)
chr2 (274-350)||(37745784-37745860)
chr2 (248-323)||(11759772-11759847)
chr2 (63-182)||(9943318-9943438)
chr2 (88-136)||(33502966-33503014)
chr2 (259-323)||(36307073-36307137)
chr2 (148-236)||(42740975-42741063)
chr2 (61-177)||(43717235-43717351)
chr2 (92-183)||(7632640-7632731)
chr2 (171-271)||(33502258-33502354)
chr2 (61-135)||(42982447-42982521)
chr2 (148-233)||(10644601-10644686)
chr2 (91-136)||(15928551-15928596)
chr2 (94-183)||(21234577-21234666)
chr2 (206-323)||(37283311-37283428)
chr2 (92-133)||(37420317-37420358)
chr2 (153-241)||(42982547-42982635)
chr2 (92-136)||(44439174-44439218)
chr2 (145-220)||(6327084-6327159)
chr2 (61-135)||(7629755-7629829)
chr2 (57-132)||(11759941-11760016)
chr2 (92-135)||(40582673-40582716)
chr2 (146-236)||(44439249-44439340)
chr2 (153-239)||(5533027-5533113)
chr2 (61-115)||(6327202-6327256)
chr2 (113-151)||(7630361-7630399)
chr2 (277-323)||(11650684-11650730)
chr2 (258-328)||(42650362-42650432)
chr2 (259-324)||(4007115-4007180)
chr2 (258-323)||(10618863-10618928)
chr2 (301-350)||(30503343-30503392)
chr2 (63-132)||(33047673-33047742)
chr2 (192-233)||(36893490-36893531)
chr2 (145-201)||(12037056-12037112)
chr2 (63-123)||(14110581-14110641)
chr2 (148-220)||(31453381-31453453)
chr2 (64-108)||(31785718-31785762)
[»] scaffold0168 (1 HSPs)
scaffold0168 (61-136)||(31719-31794)
[»] chr6 (36 HSPs)
chr6 (146-264)||(6654062-6654179)
chr6 (62-136)||(31812203-31812277)
chr6 (145-241)||(3482041-3482137)
chr6 (148-212)||(5724653-5724717)
chr6 (146-323)||(765298-765475)
chr6 (61-136)||(4910801-4910876)
chr6 (92-135)||(34620810-34620853)
chr6 (92-135)||(34748247-34748290)
chr6 (113-323)||(957537-957745)
chr6 (61-151)||(5724732-5724822)
chr6 (96-136)||(26550447-26550487)
chr6 (108-263)||(6895923-6896077)
chr6 (96-151)||(26280533-26280588)
chr6 (154-248)||(8854924-8855018)
chr6 (61-151)||(29240554-29240644)
chr6 (274-323)||(46201-46250)
chr6 (148-241)||(4910906-4910999)
chr6 (146-207)||(30927039-30927100)
chr6 (160-240)||(434232-434312)
chr6 (168-248)||(17225870-17225950)
chr6 (95-135)||(34063259-34063299)
chr6 (93-132)||(4080392-4080431)
chr6 (61-136)||(33136600-33136674)
chr6 (109-151)||(2002567-2002609)
chr6 (116-158)||(18690620-18690662)
chr6 (66-136)||(33141824-33141893)
chr6 (254-323)||(3525028-3525097)
chr6 (248-325)||(8551075-8551152)
chr6 (107-136)||(31305967-31305996)
chr6 (61-132)||(1485267-1485339)
chr6 (287-331)||(3436788-3436832)
chr6 (148-200)||(3436917-3436969)
chr6 (92-132)||(10055190-10055230)
chr6 (171-223)||(19601457-19601509)
chr6 (274-326)||(29937578-29937630)
chr6 (285-321)||(34026101-34026137)
[»] scaffold0767 (1 HSPs)
scaffold0767 (274-326)||(2901-2953)


Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 24 - 381
Target Start/End: Original strand, 39097120 - 39097465
Alignment:
Q  24 gttcatacctaataatacagctttcaaagctaataaatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttg 123  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  39097120 gttcatacctaataatacagctttcaaagctaataaatatatgtttggtttcacttttagagagaccgaaattgattatagaggtgtagaattgattttg 39097219  T
Q  124 acatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaa 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39097220 acatgtttggttggtttcaggtagaattgattctacttgaagctaaaatttgtaacttttaattatataattgattttcacacataaatttaaagttcaa 39097319  T
Q  224 cctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||           ||||||||||||||||||||||||| |||||||||    
T  39097320 cctacttttacataaatgaatc-aaaacacaaaccactttacattcaatccact-----------tcaattttatataatcaattcactctaaatcaatt 39097407  T
Q  324 attatctttgctgaaccaaacatacacaaacaatctagcttcaaaagcaagctaaagc 381  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  39097408 attatctctgctgaaccaaacaaacacaaacaatctagcttcaaaagcaacctaaagc 39097465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 483 - 655
Target Start/End: Original strand, 39097460 - 39097623
Alignment:
Q  483 taaaccaacacattttaaataaactttgatgtaaccttaaaatttcatgttacacataaatcatccttacaaaattaattcaagtattgttatctcatca 582  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39097460 taaagcaacacattttaaataaactttgatataaccttaaaatttcatgttacacataactcatccttacaaaattaattcaagtattgttatctcatca 39097559  T
Q  583 aacgtgacaccttttacacttttttcaacagcgatttgaggattatctaacatgttgttactgatgtccatct 655  Q
    ||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  39097560 aacgtg---------acacttttttcaacagcgatttgaggattatctaacatgttgttacttatgtgcatct 39097623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 31906257 - 31906349
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    |||| ||| ||||||||||||  ||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||  ||||||||||||||    
T  31906257 aattgattttacttgaagctatgatttgtaacttttgattatataattgatattttcatataaatttatagttcaactcacttttacatgaat 31906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 18637226 - 18637341
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatat 191  Q
    ||||||||| |||||||| | ||||||||   ||||||||||||| ||||| |||||||| |||| |||||||||||| ||  ||| ||||| ||| ||     
T  18637226 aaattgattctaaaggtgaacaattgattcctacatgtttggttgctttcaagtagaattgattccacttgaagctaagataagtagcttttgattctag 18637325  T
Q  192 aattgatttttacaca 207  Q
    ||||||||||||||||    
T  18637326 aattgatttttacaca 18637341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 42858103 - 42858198
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    ||||||| ||| ||||||||| ||  ||||| | ||||||||| ||||||||||||| ||||| ||||||| ||||||||  ||||||||||||||    
T  42858103 tagaattgattttacttgaagttaggatttggagcttttaattctataattgattttcacacacaaatttatagttcaactcacttttacatgaat 42858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 6951392 - 6951300
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    |||| ||||||||||||| ||  ||||||| ||||| ||| |||||||||||| |||||||||||||| | |||||   ||||||||||||||    
T  6951392 aattgattctacttgaagttaggatttgtagcttttgattctataattgatttgtacacataaatttataattcaattcacttttacatgaat 6951300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 14299423 - 14299498
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||| |||||||| |||||  |||||||||  ||||||||||||| | |||||||||||||||||| ||||    
T  14299423 aaacacaaatcactttaccttcaactcacttttatctagaatcaattttacacaatcaattcactcaaaataaatt 14299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 18851169 - 18851078
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    |||| ||||||||||||||||  ||||||| ||||| |||||| |||||||||| ||||| | ||||| |||| |||  |||||||||||||    
T  18851169 aattgattctacttgaagctatgatttgtagcttttgattatagaattgattttcacacacatatttatagttaaactcacttttacatgaa 18851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 28031260 - 28031168
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||| |||||| |||||| |||||||| ||  |||| ||||||||||||| ||||| ||| ||||||| || ||||| ||||||||||||||||    
T  28031260 aattgattctatttgaagttaaaatttatattttttgattatataattgactttta-acacaaatttatagatcaacttacttttacatgaatg 28031168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 9818732 - 9818832
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattga-tttttacacataaatttaaagttcaacctacttttacatgaatgaatca 246  Q
    |||| ||||||||||||||||  ||||||| ||||| ||| || |||||| |||||| ||| ||||||| ||||||||  ||||||| ||||||| ||||    
T  9818732 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttttatatgaatgcatca 9818831  T
Q  247 a 247  Q
    |    
T  9818832 a 9818832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 10957385 - 10957425
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  10957385 aaattgattaaaaaggtgtagaattgattttgacatgtttg 10957425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 352
Target Start/End: Original strand, 35108241 - 35108440
Alignment:
Q  152 tattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaac 251  Q
    |||| ||||||||||||   |||| ||||||| ||| || || ||||||||||||  ||||||| ||||||||  || ||||||||| |  ||  ||| |    
T  35108241 tattttacttgaagctattgtttgcaacttttgattttaaaactgatttttacacgcaaatttatagttcaacacacatttacatgagtttattcaaa-c 35108339  T
Q  252 acaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatctttgctgaaccaaacatacaca 351  Q
    ||||| |||||||  |||||   | ||||||| | ||||||||||| | ||| |||||||||||||| |||| || || | ||  |||||||||||||||    
T  35108340 acaaatcactttattttcaactaatttttatttaaaatcaattttacagaattaattcactcaaaataaatttttttcatcgcaaaaccaaacatacaca 35108439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 3043196 - 3043121
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||| ||||| ||||| | |||  ||| ||||||||| || ||||||||||||||||||||||||||| ||||    
T  3043196 tgtatgtctggttccacttatggaggaatcaaaattgattctagaggtgtagaattgattttgacatgtttagttg 3043121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 12405040 - 12404997
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  12405040 aaattgattatgaaggtgtataattgattttgacatgtttggtt 12404997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 2937994 - 2937913
Alignment:
Q  160 ttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||||| ||| |||||| | ||||||||| ||||||||||||||| |   |||||||| ||||||| |||||||||| |||||    
T  2937994 ttgaacctagaatttgaagcttttaattctataattgatttttaaattcaaatttaatgttcaacttacttttacacgaatg 2937913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 25548457 - 25548518
Alignment:
Q  107 gtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagcta 168  Q
    |||||||||||||| ||||||||||| ||| ||| | ||| |||| ||||||||||||||||    
T  25548457 gtgtagaattgattatgacatgtttgattgcttttaagtaaaattgattctacttgaagcta 25548518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 38845705 - 38845644
Alignment:
Q  59 aatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgatt 120  Q
    ||||||||||||||| ||||| |||||||| | ||||||||| |  ||||||||||||||||    
T  38845705 aatgtatgtttggttccacttctagagagaccaaaattgattctggaggtgtagaattgatt 38845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 7328783 - 7328691
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattcta-cttgaagctaaaatttgtaactttt 183  Q
    ||||||||| |  ||||||| |||||||||| |||||| ||| || |||||  ||||||| |||||| |||||||||| |||||| |||||||    
T  7328783 aaattgatttttgaggtgtataattgatttttacatgtctggatgttttcaaatagaattgattctaacttgaagctagaatttgaaactttt 7328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 16294043 - 16293999
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||| | |||||||||||||||| |||||||||||||    
T  16294043 aaattgattatagaagtgtagaattgattttaacatgtttggttg 16293999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 11648080 - 11648139
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    |||| ||||||||||||||||| |||||||  |||| |||||| |||||||||| |||||    
T  11648080 aattgattctacttgaagctaagatttgtacattttgattataaaattgattttcacaca 11648139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 15368376 - 15368447
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    ||||||||||||||||  | ||||||||||| |||||| |||||||| | ||||| ||||||| | ||||||    
T  15368376 attctacttgaagctactagttgtaacttttgattatagaattgattctaacacacaaatttataattcaac 15368447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 325
Target Start/End: Original strand, 23647565 - 23647798
Alignment:
Q  92 aaattgattataaaggt-gtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaa-ttat 189  Q
    ||||||||| || |||| ||||||||||||||   |||||||| || | | | ||| |||| |||||||||||||||| ||||||| |||||| | || |    
T  23647565 aaattgattgtagaggtcgtagaattgattttataatgtttggatgatgtaaagtaaaattgattctacttgaagctacaatttgttacttttgacttct 23647664  T
Q  190 ataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaat 289  Q
    | |||||||| | || | ||||||||  | | || | |||||||| | |||  ||| ||| || ||| || |||||||| |||||||||| || || |||    
T  23647665 acaattgattataac-cttaaatttatggctaaatccacttttacgtaaatacatccaaa-cataaatcattttacatttaatccactttcatccaaaat 23647762  T
Q  290 caattttatataatcaattcactcaaaatcaattat 325  Q
     |||||||   ||||||||||| |||||||||||||    
T  23647763 taattttactgaatcaattcacacaaaatcaattat 23647798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 325
Target Start/End: Complemental strand, 23811008 - 23810775
Alignment:
Q  92 aaattgattataaaggt-gtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaa-ttat 189  Q
    ||||||||| || |||| ||||||||||||||   |||||||| || | | | ||| |||| |||||||||||||||| ||||||| |||||| | || |    
T  23811008 aaattgattgtagaggtcgtagaattgattttataatgtttggatgatgtaaagtaaaattgattctacttgaagctacaatttgttacttttgacttct 23810909  T
Q  190 ataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaat 289  Q
    | |||||||| | || | ||||||||  | | || | |||||||| | |||  ||| ||| || ||| || |||||||| |||||||||| || || |||    
T  23810908 acaattgattataac-cttaaatttatggctaaatccacttttacgtaaatacatccaaa-cataaatcattttacatttaatccactttcatccaaaat 23810811  T
Q  290 caattttatataatcaattcactcaaaatcaattat 325  Q
     |||||||   ||||||||||| |||||||||||||    
T  23810810 taattttactgaatcaattcacacaaaatcaattat 23810775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 35108132 - 35108203
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||| ||||||||||||||||||||| || ||||||||| |  | ||||| |||||||| |||||| ||||    
T  35108132 tgtatctttggtttcacttttagagaggtcaaaattgattttggaagtgtataattgattctgacatatttg 35108203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 2090220 - 2090138
Alignment:
Q  59 aatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttc 141  Q
    ||||| ||||||||||||||| | ||| || | ||||||||||| ||||| || || ||||||| | ||||||||||| ||||    
T  2090220 aatgtttgtttggtttcacttctggagggaccaaaattgattatgaaggtatacaactgattttaatatgtttggttgatttc 2090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 13102531 - 13102490
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  13102531 aatcaattttatataatcaa-tcactcaaaattaattattatc 13102490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 19784868 - 19784946
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaatt-ttatataatcaattcactcaaaatcaattat 325  Q
    ||||| ||||||||||||||||||  ||||||||  || ||||||||   ||| |||||||||| ||||||||||||||    
T  19784868 aaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaattat 19784946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 36639940 - 36640026
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    |||||||||||||||  || ||||| ||| ||||| || ||||| |||||||||  |||||||| ||||| |  |||||||||||||    
T  36639940 attctacttgaagctggaaattgtagcttctaattctagaattgttttttacactcaaatttaatgttcacctcacttttacatgaa 36640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 24306173 - 24306116
Alignment:
Q  158 acttgaagctaaaatttgtaacttttaattatataattgatttttacacataaattta 215  Q
    |||||||| || || ||||||||||| ||| ||||||||||||||||||  |||||||    
T  24306173 acttgaagttagaaattgtaacttttgattctataattgatttttacactcaaattta 24306116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 24367143 - 24367200
Alignment:
Q  158 acttgaagctaaaatttgtaacttttaattatataattgatttttacacataaattta 215  Q
    |||||||| || || ||||||||||| ||| ||||||||||||||||||  |||||||    
T  24367143 acttgaagttagaaattgtaacttttgattctataattgatttttacactcaaattta 24367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 29922833 - 29922862
Alignment:
Q  107 gtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||||||||||||||||||||    
T  29922833 gtgtagaattgattttgacatgtttggttg 29922862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 29923008 - 29923069
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatca 320  Q
    |||| ||||||||  ||||| || ||| ||||||||||| |||||||||||| |||||||||    
T  29923008 acttcacattcaactcacttatagtcaaaatcaattttacataatcaattcattcaaaatca 29923069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 38845441 - 38845534
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctac-ttttacatgaat 240  Q
    |||| ||||||||||||||||| |||||||  |||| ||| || |||||||||| ||||| |||| || |||| |||  || ||||||||||||    
T  38845441 aattgattctacttgaagctaagatttgtagtttttgattctagaattgattttcacacacaaatatatagttaaactcactttttacatgaat 38845534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 10898626 - 10898690
Alignment:
Q  72 tttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||| |||  ||| ||||||||| || || ||| ||||| |||||||||||||||||||    
T  10898626 tttcacttttggaggaatcaaaattgattctagagctgtcgaattaattttgacatgtttggttg 10898690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 10898762 - 10898810
Alignment:
Q  191 taattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    ||||||||||||||||| |||||||  |||||||  |||||||||||||    
T  10898762 taattgatttttacacacaaatttattgttcaactcacttttacatgaa 10898810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 15955415 - 15955375
Alignment:
Q  175 gtaacttttaattatataattgatttttacacataaattta 215  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  15955415 gtaacttttaattgtagaattgatttttacacacaaattta 15955375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 16017346 - 16017382
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||||||||  |||||||||||||||||||    
T  16017346 aatcaattttatataagtaattcactcaaaatcaatt 16017382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 22226318 - 22226230
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||||||||||||| ||  ||||||| ||||| ||| || |||| | ||||||||| ||||||| ||||| ||  |||||||||| ||||    
T  22226318 attctacttgaagatagtatttgtagcttttgattttagaattaacttttacacacaaatttagagttcgactaacttttacattaatg 22226230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 37019644 - 37019604
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||| |||||||| ||||| ||||||||||||||||||||    
T  37019644 aaattaattataaacgtgtaaaattgattttgacatgtttg 37019604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 32927895 - 32928067
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaaca 252  Q
    ||||||||||||||||  ||||||| ||||| |||||| |||| ||||||||||| ||||||| ||||||||  ||||||||||||||| |||  |||||    
T  32927895 attctacttgaagctaggatttgtagcttttgattatagaattcatttttacacacaaatttatagttcaactcacttttacatgaatgtatc-caaaca 32927993  T
Q  253 caaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
    |||| |||||| | |||||  || ||||| | ||||||||||||| ||||||||||| ||||||||||||||||    
T  32927994 caaatcactttgccttcaactcaattttagtaagaatcaattttacataatcaattccctcaaaatcaattatt 32928067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 61 - 348
Target Start/End: Complemental strand, 32994416 - 32994128
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctact 160  Q
    ||||||||||||| ||||| ||||||| | | |||||||| |  | |||||||||||||| ||| ||||||||||| ||||  |||||||| ||||||||    
T  32994416 tgtatgtttggttccacttctagagaggttgtaattgattctggatgtgtagaattgattatgatatgtttggttgctttcgtgtagaattgattctact 32994317  T
Q  161 tgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaacc-- 258  Q
    ||||||||  |||| || ||||| | | || |||||||||||| ||| ||||||| ||| |||   |||||||||||||||| ||  ||||| ||| |      
T  32994316 tgaagctatgatttctagcttttgagtctagaattgatttttatacacaaatttatagtgcaaatgacttttacatgaatgagtc-caaacataaatcaa 32994218  T
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatctttgctgaaccaaacatac 348  Q
    | ||||| |||||  |||||| |  |||||||||||||| ||||||| |||| |||||||||||| | |||  ||| |||||||||||||    
T  32994217 attttaccttcaactcactttcagccagaatcaattttacataatcagttcattcaaaatcaattgtcatcactgcagaaccaaacatac 32994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 35494993 - 35495148
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaaca 252  Q
    ||||||| ||||||||  ||||||| ||||| ||| || ||||| |||||||||| |||| || |||||||| |||||||||||||||  |||  |||||    
T  35494993 attctacatgaagctaggatttgtagcttttgattctagaattgttttttacacacaaatctatagttcaacttacttttacatgaatatatc-caaaca 35495091  T
Q  253 caaaccactttacattcaatccacttttattcagaatcaattttatataatcaattc 309  Q
    |||| ||||||| |||||| ||||||||| |||||| |||||||| |||||||||||    
T  35495092 caaatcactttatattcaacccacttttaatcagaagcaattttacataatcaattc 35495148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 108 - 329
Target Start/End: Complemental strand, 18355975 - 18355756
Alignment:
Q  108 tgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    |||||||||||||||||||||| || ||| ||||  |||||||| |||||  |||||||||  ||||||  ||||| ||| || |||||||||||||||     
T  18355975 tgtagaattgattttgacatgtatgattgttttcgagtagaattgattctgattgaagctaggatttgtgtcttttgattctaaaattgatttttacac- 18355877  T
Q  208 taaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccac-tttacattcaatccacttttattcagaatcaattttatataatcaa 306  Q
     ||||||||||||||||   ||||||||  |||| |||  ||| | ||| ||| ||||  | ||| ||||||||| ||| ||||||||||| | ||||||    
T  18355876 -aaatttaaagttcaactcccttttacacaaatgtatc-caaatataaatcacttttatctccaagccacttttaatcataatcaattttacaaaatcaa 18355779  T
Q  307 ttcactcaaaatcaattattatc 329  Q
    ||||||||||||||||| |||||    
T  18355778 ttcactcaaaatcaatttttatc 18355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 15677991 - 15677826
Alignment:
Q  60 atgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctac 159  Q
    |||||||||||||| ||||| || || | |  ||||||||| |  || |||| |||||||| ||||||||||||||| |||||  ||||||| |||||||    
T  15677991 atgtatgtttggttccacttctacaggggttaaaattgattgtggagttgtacaattgattctgacatgtttggttgctttcaaatagaattgattctac 15677892  T
Q  160 ttgaagctaaaatttgtaacttttaattatataattgat-ttttacacataaatttaaagttcaac 224  Q
    |||||||||  |||| || ||||| |||||| ||||||| ||||||||| ||||||| ||||||||    
T  15677891 ttgaagctaggatttatagcttttgattatagaattgattttttacacacaaatttatagttcaac 15677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 145 - 310
Target Start/End: Complemental strand, 26100236 - 26100072
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaat 244  Q
    |||||||  ||||| |||||||||  ||||||| ||||| ||| ||||||||||||||||||| |||||||  |||||||  |||||||||| |||| ||    
T  26100236 tagaattggttctatttgaagctaggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcacttttacataaatgcat 26100137  T
Q  245 caaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattca 310  Q
    |  |||||||||   |||||| |||||  |  ||||| ||||||||||||||| ||||||||||||    
T  26100136 c-caaacacaaatagctttaccttcaactcgtttttagtcagaatcaattttacataatcaattca 26100072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 147 - 320
Target Start/End: Complemental strand, 4662991 - 4662823
Alignment:
Q  147 gaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatca 246  Q
    ||||||||||||||||||||||  ||||||| |||||  || || |||||||||||||||| |||| || ||||||||   ||||| | |||||| |||     
T  4662991 gaatttattctacttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaaatgtatagttcaactcgcttttccgtgaatgtatc- 4662893  T
Q  247 aaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatca 320  Q
     |||||||||    | |||||| ||  || ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4662892 caaacacaaa----tctacatttaactcagttttagtcagaatcaattttacataatcaattcactcaaaatca 4662823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 259 - 350
Target Start/End: Complemental strand, 7602105 - 7602014
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatctttgctgaaccaaacatacac 350  Q
    |||||||||||||| || ||||| |  |||||||||||||| |||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  7602105 actttacattcaattcatttttagttcgaatcaattttataaaatcaattcactcaaaatcaataattatcaatgcggaaccaaacatacac 7602014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 10368044 - 10368164
Alignment:
Q  229 ttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattat 328  Q
    ||||||||||||| ||| ||| |||||| |||||||| |||||  |||||||| ||| ||||||||||| | || |||||||||||||||||||| ||||    
T  10368044 ttttacatgaatgtatctaaa-cacaaatcactttaccttcaactcacttttactcaaaatcaattttacaaaaacaattcactcaaaatcaattcttat 10368142  T
Q  329 ctttgctgaaccaaacatacac 350  Q
    |  |||  ||||||||||||||    
T  10368143 cactgcgaaaccaaacatacac 10368164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 13384741 - 13384653
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    |||| |||||| |||||||||||||||||| ||||| ||| || |||||||||| ||||| ||||||| ||||||||  ||||||||||    
T  13384741 aattgattctatttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcacttttacat 13384653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 38868742 - 38868664
Alignment:
Q  58 aaatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||||||||||||||||||| ||| | ||||||||| | ||||||| || ||||||| || ||||||||||    
T  38868742 aaatgtatgtttggtttcacttttagagggattgtaattgattacagaggtgtataactgattttaacttgtttggttg 38868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 323
Target Start/End: Complemental strand, 38335986 - 38335775
Alignment:
Q  110 tagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacata 209  Q
    |||| |||||| ||||||||||| ||| ||||  ||| |||| |||| | |||||||||| ||||||  ||||| ||| || ||||||||||||| || |    
T  38335986 tagatttgattctgacatgtttgtttgttttcgagtataattgattccagttgaagctaagatttgttgcttttgattttagaattgatttttacgcaca 38335887  T
Q  210 aatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattc 309  Q
    |||||| | |  |||  ||||||||||||||| |||   |||||||| || || || |||||  |||||||| ||| ||| ||||||| ||  ||||||     
T  38335886 aatttatattctaactcacttttacatgaatgtatc-cgaacacaaatcaattcaccttcaactcacttttaatca-aattaattttacattgtcaatta 38335789  T
Q  310 actcaaaatcaatt 323  Q
    ||||||||||||||    
T  38335788 actcaaaatcaatt 38335775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 38868496 - 38868572
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    |||| ||||||||||||||||| ||||||| |||||  || ||||||||||||| ||||| ||||||| ||||||||    
T  38868496 aattgattctacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaatttatagttcaac 38868572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 36448007 - 36448078
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||||||||||| ||||||| ||||  || ||||||||| |||| |||||||||| |||||||||||||||    
T  36448007 tgtatgtttggttccactttttgagaagtctaaattgattctaaatgtgtagaattcattttgacatgtttg 36448078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 16972139 - 16972006
Alignment:
Q  160 ttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaacca 259  Q
    ||||||||| ||||||||  |||||||| || |||||||||||| ||| |||||||  ||||||   ||||||||||||||| ||   ||||||||| ||    
T  16972139 ttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttattgttcaaatcacttttacatgaatgtat-tcaaacacaaatca 16972041  T
Q  260 ctttacattcaatccacttttattcagaatcaatt 294  Q
     ||||| |||||  |||||||| || |||||||||    
T  16972040 ttttaccttcaactcacttttagtctgaatcaatt 16972006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 13418798 - 13418737
Alignment:
Q  262 ttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||  |||||||| |||||||||||| ||  ||||||||||||||||||||||||    
T  13418798 ttacattcaactcacttttagtcagaatcaattctacctaatcaattcactcaaaatcaatt 13418737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 9461546 - 9461452
Alignment:
Q  227 acttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||| ||||||| ||| ||| |||||| |||||||  | |||| || ||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  9461546 acttttatatgaatgtatccaaa-cacaaatcactttagttgcaattca-ttttagtcagaatcaattttaaataatcaattaactcaaaatcaatt 9461452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 39648335 - 39648263
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||| |||||||||||   || ||||||||| || || |||| |||||||||||||||||||||||    
T  39648335 tatgtttggttacacttttagaggagtcaaaattgattctagagatgtataattgattttgacatgtttggtt 39648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 26559914 - 26559864
Alignment:
Q  273 ccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||| | ||||||||||||||  |||||||||||||||||||||||    
T  26559914 ccacttttagttagaatcaattttatcaaatcaattcactcaaaatcaatt 26559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 18123324 - 18123404
Alignment:
Q  249 aacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    |||||||| || ||||| |||||| |||||||| | ||| || |||||| || |||||||||||| ||||||||| |||||    
T  18123324 aacacaaatcattttaccttcaattcacttttagttagagtcgattttacatcatcaattcactctaaatcaattcttatc 18123404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 20854446 - 20854398
Alignment:
Q  176 taacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||||||    
T  20854446 taacttttaattataaaattaattttcaaacataaatttaaagttcaac 20854398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 8252719 - 8252762
Alignment:
Q  90 cgaaattgattataaaggtgtagaattgattttgacatgtttgg 133  Q
    ||||||||||| || |||||||||| ||||||||||||||||||    
T  8252719 cgaaattgattctagaggtgtagaactgattttgacatgtttgg 8252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 41614768 - 41614827
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||| || |||| || ||||||||||||| ||||||| |||||||| ||||||||    
T  41614768 aaattgattctagaggtataaaattgattttgacttgtttggatggtttcaagtagaatt 41614827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 5219055 - 5218993
Alignment:
Q  65 tgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacat 127  Q
    |||||||||  ||||||||||||| | ||||| ||| ||||| ||||||||||||| ||||||    
T  5219055 tgtttggttcaacttttagagagaccaaaattaattctaaagatgtagaattgattctgacat 5218993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 32100966 - 32101040
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||||| ||||||||||| ||    | |||||| | || |||||||||||||| ||||||||||||||    
T  32100966 tgtatgtttggttccacttttagagggactagagttgattctgaatgtgtagaattgattctgacatgtttggtt 32101040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 35495153 - 35495223
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgttt 131  Q
    ||||||||||||| ||||||| |||    | ||||||||| || | |||||||||||||||||||||||||    
T  35495153 tgtatgtttggttccacttttggagcacccaaaattgattctacaagtgtagaattgattttgacatgttt 35495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 10026269 - 10026306
Alignment:
Q  286 gaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  10026269 gaatcaattttacataatcaattcactcaaactcaatt 10026306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 10223898 - 10223935
Alignment:
Q  286 gaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  10223898 gaatcaattttacataatcaattcactcaaactcaatt 10223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 11572545 - 11572492
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttt 201  Q
    |||| ||| |||||||||||||||||||||  |||| |||||| ||||||||||    
T  11572545 aattgattatacttgaagctaaaatttgtagattttgattataaaattgatttt 11572492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 2206495 - 2206459
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  2206495 aatcaattttatataattaattcactctaaatcaatt 2206459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 4336343 - 4336371
Alignment:
Q  110 tagaattgattttgacatgtttggttggt 138  Q
    |||||||||||||||||||||||||||||    
T  4336343 tagaattgattttgacatgtttggttggt 4336371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 4336639 - 4336571
Alignment:
Q  253 caaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaa 321  Q
    |||| ||||| | ||||| | ||||||||  || ||||||||||| | |||||||||||||||||||||    
T  4336639 caaatcacttcagattcagttcacttttagccacaatcaattttacaaaatcaattcactcaaaatcaa 4336571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 8182218 - 8182182
Alignment:
Q  99 ttataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  8182218 ttataaatgtgtagaattgattttgatatgtttggtt 8182182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 34732098 - 34732038
Alignment:
Q  62 gtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgatttt 122  Q
    |||||||||| | |||||||||||| | | ||||||||| || | ||||||||||||||||    
T  34732098 gtatgtttggctccacttttagagataccaaaattgattctagatgtgtagaattgatttt 34732038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 42455836 - 42455880
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||  ||  ||||||||||||||||||||||||||||    
T  42455836 aaattgattatggagcagtagaattgattttgacatgtttggttg 42455880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 146 - 323
Target Start/End: Original strand, 40491574 - 40491750
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatc 245  Q
    |||||| | ||||||||||| |||  |||||| ||||| ||| || |||||| ||||||||| |||||||||||| |||  ||||||||||||||| |||    
T  40491574 agaattgactctacttgaagttaagttttgtagcttttgattctagaattgacttttacacacaaatttaaagtttaactcacttttacatgaatgtatc 40491673  T
Q  246 aaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
     |||| | ||| |||||||| |||||  |||||||| ||| ||||||||||| | |||||||||||||||||||||||    
T  40491674 caaaa-ataaatcactttaccttcaactcacttttagtcaaaatcaattttacagaatcaattcactcaaaatcaatt 40491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 38123809 - 38123660
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatat 191  Q
    ||||||||| || || ||||||||||||||| ||||||||||||  | | | |||||||| |||||||||||||||| || ||||| ||| ||||| ||     
T  38123809 aaattgattctagagatgtagaattgattttaacatgtttggttcctataaagtagaattgattctacttgaagctagaaattgtagcttctaattctag 38123710  T
Q  192 aattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||||||||||||  |||||||  | |||||  |||||||||||||||    
T  38123709 aattgatttttacactcaaatttattggtcaactcacttttacatgaatg 38123660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 144 - 294
Target Start/End: Original strand, 45557359 - 45557508
Alignment:
Q  144 gtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaa 243  Q
    |||||||| ||| | || ||||||| ||| |||| ||||||||| ||  ||||||||||||||| ||||||  || |||||  ||||||||||||||| |    
T  45557359 gtagaattgattttgctagaagctagaatctgtagcttttaattctaggattgatttttacacacaaatttgtagctcaactcacttttacatgaatgta 45557458  T
Q  244 tcaaaaacacaaaccactttacattcaatccacttttattcagaatcaatt 294  Q
    ||  ||||||||| |||||||| |||||  |||||||| ||||||||||||    
T  45557459 tc-caaacacaaatcactttaccttcaactcacttttagtcagaatcaatt 45557508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 35105255 - 35105330
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||| ||| |||||| ||||||||||||||| || |||||||||||||| | |||||||||||||||||||||||    
T  35105255 aaacataaatcacttttcattcaatccactttcatccagaatcaattttaaaaaatcaattcactcaaaatcaatt 35105330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 313
Target Start/End: Complemental strand, 42344779 - 42344614
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatc 245  Q
    ||||||||||||| |||||| | ||||||||| | | | ||| |||||||||||||||| ||||||||| |||||||||  | | ||||||||||  |||    
T  42344779 agaatttattctatttgaagttgaaatttgtagcatctgattctataattgatttttactcataaatttgaagttcaactcattattacatgaatatatc 42344680  T
Q  246 aaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactc 313  Q
      ||||||||| |||||||  ||||||  ||||  | |||||||||| |||| | |||||||||||||    
T  42344679 -taaacacaaatcactttatcttcaataaacttaaaatcagaatcaa-tttacaaaatcaattcactc 42344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 42481865 - 42481803
Alignment:
Q  261 tttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||  ||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  42481865 tttacattcaactcactttttttcagaatcaattttacataatcaattcacttaaaatcaatt 42481803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 41386904 - 41386811
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    |||||| ||||||||||||||||  ||||||| ||||||||| || ||||||| |||||||| ||||||| | ||||||  |||||| ||||||    
T  41386904 agaattgattctacttgaagctaggatttgtagcttttaattctagaattgatatttacacacaaatttataattcaactcacttttgcatgaa 41386811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 15019431 - 15019355
Alignment:
Q  247 aaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||| ||| || |||| ||| || ||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  15019431 aaaacataaaacattttatattgaacccacttttattcttaatcaattttatataattaattcactcaaaatcaatt 15019355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 17111782 - 17111890
Alignment:
Q  75 cacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaattt 174  Q
    ||||| ||||| | || ||||| ||| || || ||| ||||||||| ||||||||||||||| ||||  |||||||| ||||||||||||||||  ||||    
T  17111782 cacttctagaggggtcaaaattaattctagagatgtcgaattgattctgacatgtttggttgctttcgagtagaattgattctacttgaagctatgattt 17111881  T
Q  175 gtaactttt 183  Q
    ||| |||||    
T  17111882 gtagctttt 17111890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 28725130 - 28725051
Alignment:
Q  157 tacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    |||||||||||| |||||||| ||||| ||| ||||||||||| | |||| || |||||||||||| | |||||||||||    
T  28725130 tacttgaagctagaatttgtagcttttgattctataattgattctcacacgtatatttaaagttcagcttacttttacat 28725051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 34536761 - 34536810
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  34536761 cacttttattcaaaattaattttatataatcaattcattcaaaatcaatt 34536810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 24954191 - 24954230
Alignment:
Q  308 tcactcaaaatcaattattatctttgctgaaccaaacata 347  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24954191 tcactcaaaatcaattcttatctttgctgaaccaaacata 24954230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 45004909 - 45004952
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||| || |||||||||||||||||||||||||||||||    
T  45004909 aaattgattctagaggtgtagaattgattttgacatgtttggtt 45004952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 12306671 - 12306717
Alignment:
Q  105 aggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||    
T  12306671 aggtgtagaattgattttgacatgtttggttgctctcaagtagaatt 12306717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 598034 - 597942
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    |||||| ||||||||||||||||||| ||||| ||||  ||| ||||||||||| || |||  |||||||  |||||||  |||||||||||||    
T  598034 agaattgattctacttgaagctaaaa-ttgtagctttcgattctataattgattcttgcactaaaatttattgttcaactcacttttacatgaa 597942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 48158815 - 48158859
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||||    
T  48158815 aaattgattatgaaggcgtaaaattgattttgacatgtttggttg 48158859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 30182383 - 30182316
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaattta 215  Q
    |||| ||||||||||||||||||| ||||| ||||| ||| || |||| ||||||||||  |||||||    
T  30182383 aattgattctacttgaagctaaaaattgtagcttttgattctagaattaatttttacactcaaattta 30182316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 4228609 - 4228687
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
    ||||| ||| |||||| |||||||  |||||||| ||| |||||||| | || ||||||||||  ||||||||||||||    
T  4228609 aaacataaatcacttttcattcaactcacttttaatcaaaatcaattatgtaaaatcaattcaaccaaaatcaattatt 4228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 31331283 - 31331325
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    ||||||||||||| |||||||||| |||||||||| |||||||    
T  31331283 aatcaattttataaaatcaattcattcaaaatcaaatattatc 31331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 37277597 - 37277647
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgattttta 203  Q
    ||||||||| |||||| || ||||||||||||||| || ||||||||||||    
T  37277597 attctacttaaagctataaattgtaacttttaattttagaattgattttta 37277647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 29339240 - 29339309
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||||||||| || || |||| ||||| ||||||||||||||||| || |||| ||| || ||||||||    
T  29339240 tatgtttggttccatttgtagaaagatcaaaattgattataaaggtatataattaattatgtcatgtttg 29339309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 326
Target Start/End: Original strand, 7524120 - 7524288
Alignment:
Q  157 tacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaa 256  Q
    ||||||||| ||  ||||||| ||||| |||||| |||||||||||||||| ||||||| ||||||||  |||||||||| ||||  ||  |||||||||    
T  7524120 tacttgaagttaggatttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcacttttacataaatgtgtc-caaacacaaa 7524218  T
Q  257 ccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
     |||||||| || |   |||||||| | ||||||||||||||| ||||| ||||| ||||||||||||||    
T  7524219 tcactttaccttgagctcacttttagttagaatcaattttatagaatcagttcacccaaaatcaattatt 7524288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 154 - 326
Target Start/End: Complemental strand, 32370112 - 32369941
Alignment:
Q  154 ttctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacac 253  Q
    |||||||||||| || ||||||||| |||| ||| || ||||  |||||||||| ||||||| | || ||| | |||||||||||||| ||| ||| |||    
T  32370112 ttctacttgaagttagaatttgtaattttttattctagaattattttttacacacaaatttataattgaacttgcttttacatgaatgtatccaaa-cac 32370014  T
Q  254 aaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
    ||| ||||||| | |||||||| | ||| ||| |||||||| || | ||||||||||||||||||||||||||    
T  32370013 aaatcactttataatcaatccattattagtcaaaatcaattctacacaatcaattcactcaaaatcaattatt 32369941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 3134906 - 3134725
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctact 160  Q
    |||||||||||||||| ||||| |   | | ||||||| | | |||||||| ||||||||||||||| |||| ||| ||| | ||  |||| ||||||||    
T  3134906 tgtatgtttggtttcatttttatatgtaacaaaattgactttgaaggtgtaaaattgattttgacatatttgattgcttttaagtgtaattgattctact 3134807  T
Q  161 tgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatga 242  Q
    | ||| ||| ||||||||||||| || ||| ||||| |||||||||||||||||||| ||  ||| | ||||||||||||||    
T  3134806 ttaagataagatttgtaacttttgatcataaaattggtttttacacataaatttaaaattttacccatttttacatgaatga 3134725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 1514341 - 1514434
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| |||||||  |||||||  | |||||||||||||    
T  1514341 aatttattctacttgaagctaggatttgtagctttttattatataattgatttttacacacaaatttattgttcaactcatttttacatgaatg 1514434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 11049205 - 11049341
Alignment:
Q  105 aggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttac 204  Q
    ||||||||||||||||  |||||||||  ||| ||||  |||||||  ||||||||||||||||  ||||||| ||||| ||| || |||||||||||||    
T  11049205 aggtgtagaattgattcagacatgtttcattgctttcgagtagaatcgattctacttgaagctaggatttgtagcttttgattctaaaattgatttttac 11049304  T
Q  205 acataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||| ||||||| |||||||   |||||||| ||||||    
T  11049305 acacaaatttatagttcaagtcacttttacgtgaatg 11049341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 148 - 294
Target Start/End: Complemental strand, 28083975 - 28083831
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa 247  Q
    |||| |||||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| |||||| ||||||| |  ||||||||||||||  |||      
T  28083975 aattgattctacttgaagctagaatttgtagcttttgattctataattaatttttacacacaaatttcaagttcagctcacttttacatgaatatatc-c 28083877  T
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaatt 294  Q
    |||||||||  | |||||||||||| |||| ||| ||| ||||||||    
T  28083876 aaacacaaa-taatttacattcaattcactcttagtcataatcaatt 28083831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 3016160 - 3016304
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa 247  Q
    |||| ||||||||||||  || |||||||| ||||| ||| || ||||||| ||||||||||||||||  |||||||  ||||||||||||||| ||| |    
T  3016160 aattgattctacttgaacttagaatttgtagcttttgattctagaattgatgtttacacataaatttacggttcaactcacttttacatgaatgtatcca 3016259  T
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattt 295  Q
    |   ||| | ||||||| ||||||| | |||||||||| |||||||||    
T  3016260 a---acatatcactttatattcaattctcttttattcaaaatcaattt 3016304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 47322102 - 47322002
Alignment:
Q  57 taaatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattc 156  Q
    ||||| |||||||||||||||||||||||||||   |||| ||| |  ||||||||||||||||||||||||||| |||| | ||  |||||||| ||||    
T  47322102 taaatatatgtttggtttcacttttagagagattataatttattgtggaggtgtagaattgattttgacatgttttgttgttgtcgagtagaattgattc 47322003  T
Q  157 t 157  Q
    |    
T  47322002 t 47322002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 350
Target Start/End: Original strand, 29988322 - 29988504
Alignment:
Q  171 atttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa---aaacacaaaccactttacat 267  Q
    ||||||||||||||||| || |||| | ||||||| | ||| |||   || |||  || |||||||||||| ||| |   ||||||||| |||| |||||    
T  29988322 atttgtaacttttaattctagaattaacttttacaaacaaacttatgtttgaactcacctttacatgaatgtatccatccaaacacaaatcactatacat 29988421  T
Q  268 tcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatctttgctgaaccaaacatacac 350  Q
    ||||  |||||||||||| ||||| ||| | |||||||| ||||  |||||||||| ||||| | ||  ||||||||||||||    
T  29988422 tcaactcacttttattcataatcattttcacataatcaactcaccaaaaatcaatttttatcatcgcataaccaaacatacac 29988504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 30850481 - 30850390
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaat 244  Q
    |||||||||||| |||  |||||||  |||||||| || |||||||||| ||| | ||||||| ||||||||  ||||||||||||||||||    
T  30850481 attctacttgaaactaggatttgtagtttttaattttagaattgattttaacatacaaatttatagttcaactcacttttacatgaatgaat 30850390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 36780307 - 36780234
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||| ||| |||||||||| || |  ||||||||||  |||||||||||||||||||| |||||||||||    
T  36780307 tatgtttgattttacttttagagggaccataattgattatggaggtgtagaattgattttgatatgtttggttg 36780234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 4192587 - 4192642
Alignment:
Q  263 tacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaat 318  Q
    |||||||||  |||||||||||| ||||||||||||||||| ||||| ||||||||    
T  4192587 tacattcaactcacttttattcaaaatcaattttatataattaattcgctcaaaat 4192642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 20720741 - 20720783
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  20720741 aaattgattataa-ggtgtagaattgattttgacatgtttggtt 20720783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 35681824 - 35681897
Alignment:
Q  62 gtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    |||||||||||||||||||||||| | || || |||||| || | |||||  ||||||| ||||||||||||||    
T  35681824 gtatgtttggtttcacttttagaggggtcaaagttgattttagatgtgtaacattgattctgacatgtttggtt 35681897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 47899376 - 47899425
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||| | ||||||||||||| | |||||||||||||||||||||||    
T  47899376 cacttttagtaagaatcaattttacaaaatcaattcactcaaaatcaatt 47899425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 7790732 - 7790644
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctactttta 233  Q
    ||||||| ||||||||||||| ||  |||||||  |||  ||| ||||||||||||||||||| |||||||  |||||||  |||||||    
T  7790732 tagaattgattctacttgaagttatgatttgtagatttagattctataattgatttttacacacaaatttattgttcaactcactttta 7790644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 15478193 - 15478118
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaa-ttgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||| ||||||| ||| || | ||| |||||| ||  |||||||||||||||||||||||||||||||    
T  15478193 tgtatgtttggttccacttttggag-gagccaaacttgattttagcggtgtagaattgattttgacatgtttggttg 15478118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 3515940 - 3515979
Alignment:
Q  284 cagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  3515940 cagaatcaattttacataatcaattcactcaaaaccaatt 3515979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 40642994 - 40643069
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||| ||| ||||||||||||||    || |||| || ||||||||||| | |||||||||||||||||||||||    
T  40642994 aaacataaatcactttacattcaacttgctcttatccaaaatcaattttacagaatcaattcactcaaaatcaatt 40643069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 6041587 - 6041660
Alignment:
Q  63 tatgtttggtttcacttttagag-agatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||||| ||||||| || | | |||||||| || ||||||| |||||||||||| |||||||||||    
T  6041587 tatgtttggtttcacgtttagagcagct-ggaattgattctagaggtgtaaaattgattttgatatgtttggttg 6041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 10325028 - 10324958
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaattta 215  Q
    ||||||| | ||||||||||| || || ||||| ||||| ||| ||||||||||||||||||  |||||||    
T  10325028 tagaattgagtctacttgaagatagaaattgtagcttttgattctataattgatttttacactcaaattta 10324958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 24587835 - 24587877
Alignment:
Q  94 attgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||| || |||||||||||||||| |||||||||||||||    
T  24587835 attgattctagaggtgtagaattgattgtgacatgtttggttg 24587877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 49079406 - 49079332
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    |||||||||| || ||||||| ||| | || |||| ||||  | ||||||||| |||||||||||||||||||||    
T  49079406 tgtatgtttgattccacttttggagtgctcaaaatcgattccagaggtgtagagttgattttgacatgtttggtt 49079332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 3327790 - 3327827
Alignment:
Q  286 gaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  3327790 gaatcaattttacataatcaattcactcaaactcaatt 3327827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 3515821 - 3515874
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacac 206  Q
    |||||||||||||||| || ||||| ||||| ||| || |||||||||||||||    
T  3515821 attctacttgaagctagaaattgtagcttttcattctagaattgatttttacac 3515874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 13344838 - 13344915
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattat 325  Q
    ||||| ||| |||||||| |||||  ||||||||  || |||||||| || | |||||||||| ||||||||||||||    
T  13344838 aaacataaatcactttacgttcaactcacttttaaccaaaatcaattctacaaaatcaattcaatcaaaatcaattat 13344915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 34721895 - 34721834
Alignment:
Q  180 ttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||| ||| ||||||||||||| ||||| ||||||| ||||| || ||||||||||| ||||    
T  34721895 tttttattctataattgattttcacacacaaatttatagttcgacttacttttacatcaatg 34721834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 6021807 - 6021891
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatg 237  Q
    ||||||||||||||||  || |||| ||||| ||| |||||| |||||||||||  || ||||  |||||||  |||||||||||    
T  6021807 attctacttgaagctaggatatgtagcttttgattctataatagatttttacactcaagtttatggttcaactcacttttacatg 6021891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 28287461 - 28287337
Alignment:
Q  110 tagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacata 209  Q
    |||| |||||| ||||| | ||||||| |||   ||||||||  ||||||||||||| |  ||||||| ||||| ||| || |||||||||| ||||  |    
T  28287461 tagacttgattctgacaaggttggttgcttttgagtagaattggttctacttgaagcaaggatttgtagcttttgattttagaattgattttaacactca 28287362  T
Q  210 aatttaaagttcaacctacttttac 234  Q
    ||||||  |||||||  ||||||||    
T  28287361 aatttattgttcaactaacttttac 28287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 32088719 - 32088675
Alignment:
Q  107 gtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||| |||||||||||||||||||||||| | ||| ||||||||    
T  32088719 gtgtaaaattgattttgacatgtttggttgctctcaagtagaatt 32088675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 33693029 - 33693077
Alignment:
Q  158 acttgaagctaaaatttgtaacttttaattatataattgatttttacac 206  Q
    ||||||||||| || ||||| ||||| ||| ||||||||||||||||||    
T  33693029 acttgaagctagaaattgtagcttttgattctataattgatttttacac 33693077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 39386631 - 39386723
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    |||| ||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||| | ||||||||||||||  ||||||||||||||    
T  39386631 aattgattctacttaaagctaaaatttataacatttaattctataattgattttcacacacatatttaaagttcaactcacttttacatgaat 39386723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 32818459 - 32818364
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||| |||||| ||||||||| |||||||| ||||| ||| || ||||||||||| |||| ||||||| ||||||||  |||||||||||||||    
T  32818459 agaattgattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaaatttatagttcaactaacttttacatgaatg 32818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 2635056 - 2635144
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaa 149  Q
    ||||||||||||||||||||||||| || | ||||||||| || | ||||| |||||||||||||||||||| ||| ||| | ||||||    
T  2635056 tgtatgtttggtttcacttttagagggaccaaaattgattctagaagtgtaaaattgattttgacatgtttgattgcttttaagtagaa 2635144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 16551853 - 16551925
Alignment:
Q  64 atgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||| |||||||| ||||||    
T  16551853 atgtttggttccactttcagagagatcaaaattgattttagaggtgtagaattgattctgacatgtatggttg 16551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 30357507 - 30357582
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagtt 220  Q
    ||||||| |||||||||||||||   ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||    
T  30357507 tagaattgattctacttgaagctgtgatttgtagcttttgattatataattgatttttacacacaaatttatagtt 30357582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 55187051 - 55186958
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||| |||||||||| ||||||  ||||| |||| || | |||| ||||||||||    
T  55187051 agaattgattctacttgaagttaggatttgtaacttttaattatagaattgattttcacacat--atttatagttaaaaccacttctacatgaatg 55186958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 1616354 - 1616503
Alignment:
Q  113 aattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaat 212  Q
    |||||||| ||||||| ||||||| | ||  |||||||| ||||||||| |||||| |||||||| ||||| ||| || ||||||||   ||||| |  |    
T  1616354 aattgattctgacatgattggttgttatcgagtagaattgattctactt-aagctacaatttgtagcttttgattctagaattgattcccacacacatgt 1616452  T
Q  213 ttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccacttta 264  Q
    ||||||||||||  | ||||||||||||| ||   |||||||||||||||||    
T  1616453 ttaaagttcaactcatttttacatgaatgtat-tcaaacacaaaccacttta 1616503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 2327003 - 2326913
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||||||||||||||||| | || |  |||| |||||  |||| ||||||||||| ||||||||||||||| ||||| | ||||||    
T  2327003 tgtatgtttggtttcacttttagtgggaccataattaattatggaggtatagaattgattatgacatgtttggttgatttcatgaagaatt 2326913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 21691301 - 21691207
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    |||||| |||| ||||||| |||| ||||||| |||||  || || |||||||||| ||||| ||||||| ||||||||  ||||||||||||||    
T  21691301 agaattgattcaacttgaaactaagatttgtagcttttggttgtagaattgattttcacacacaaatttatagttcaacacacttttacatgaat 21691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 24364167 - 24364105
Alignment:
Q  261 tttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||  |||||||| | ||||||||||||| |||||||||||| ||||||||||||    
T  24364167 tttacattcaaatcacttttagtgagaatcaattttacataatcaattcattcaaaatcaatt 24364105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 27968026 - 27967952
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttgg 137  Q
    |||||||| || ||||| || |||| || |||||||||||| |||||||||||||||| |||||||| |||||||    
T  27968026 tatgtttgattccacttctaaagaggtcaaaattgattatataggtgtagaattgattatgacatgtatggttgg 27967952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 49139027 - 49138937
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||||||| ||||| || || |  | ||||||||| || |||||||||||||||| ||||||||||||||| ||||| ||| ||||    
T  49139027 tgtatgtttggttccacttctaaagtggccaaaattgattctagaggtgtagaattgattctgacatgtttggttgttttcaagtaaaatt 49138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 8604709 - 8604616
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||| ||||||||||||||||| ||||||| ||||  ||| || |||||||||| ||||| ||||||| |||| ||   |||||||||||||||    
T  8604709 aattgattctacttgaagctaagatttgtagctttcgattctagaattgattttcacacacaaatttatagttgaatgcacttttacatgaatg 8604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 54549433 - 54549376
Alignment:
Q  160 ttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaa 217  Q
    |||||| ||| |||| ||||||||||||||| |||||||||||| |||||||||||||    
T  54549433 ttgaagataagatttataacttttaattatagaattgatttttatacataaatttaaa 54549376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 35065061 - 35065176
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa 247  Q
    |||| ||| ||||||||||||  |||||| |||||| ||| || |||||||||||||||| ||||||| |  || ||  ||||||||||||||| |||      
T  35065061 aattgattttacttgaagctagtatttgtgacttttgattctagaattgatttttacacacaaatttatatctccactcacttttacatgaatgtatc-c 35065159  T
Q  248 aaacacaaaccacttta 264  Q
    ||||||||| |||||||    
T  35065160 aaacacaaatcacttta 35065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 47596488 - 47596416
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgatt-ttgacatgtttg 132  Q
    ||||||| ||||||||||||| |||  ||| ||||||||| |||||||| |||||||||| ||||||||||||    
T  47596488 tgtatgtatggtttcacttttggaggaatcaaaattgattttaaaggtggagaattgattgttgacatgtttg 47596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 26617471 - 26617542
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    |||||||||||||||| ||| |||| ||||| |||||| |||||||||||| | ||||||||| | ||||||    
T  26617471 attctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 26617542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 37439143 - 37439201
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacac 206  Q
    |||||||| |||||||||||| || || || ||||||||| ||||||||||||||||||    
T  37439143 aatttattatacttgaagctagaaattatagcttttaattctataattgatttttacac 37439201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 50945464 - 50945390
Alignment:
Q  247 aaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaa 321  Q
    |||||| ||| ||||||||||| ||  ||  ||||| | |||||||||||||| |||||||||||||||||||||    
T  50945464 aaaacataaatcactttacatttaactcaaatttatccggaatcaattttataaaatcaattcactcaaaatcaa 50945390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 9134606 - 9134667
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    |||||| || |||||||||||||||||||||| ||||| ||| || |||||||||| |||||    
T  9134606 agaattgatcctacttgaagctaaaatttgtagcttttgattttagaattgattttcacaca 9134667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 30357644 - 30357709
Alignment:
Q  147 gaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaat 212  Q
    ||||| |||||| |||||||||  || |||| ||||| ||||||||||| ||||||||||||||||    
T  30357644 gaattgattctaattgaagctatgatctgtagcttttgattatataatttatttttacacataaat 30357709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 49138847 - 49138774
Alignment:
Q  151 ttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    ||||||||||||||||||  ||||||||||||| ||| || |||||||||||| ||| ||  ||| ||||||||    
T  49138847 ttattctacttgaagctaggatttgtaacttttgattctaaaattgatttttatacacaagcttatagttcaac 49138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 323
Target Start/End: Original strand, 4243416 - 4243560
Alignment:
Q  179 cttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccactt 278  Q
    ||||| ||| || |||||||||||||||  |||||||  |||| ||  |||||||||| ||||  || |||||| ||| |||||||| | ||    ||||    
T  4243416 cttttgattctagaattgatttttacactcaaatttattgttctactcacttttacatcaatgtctccaaaacaaaaatcactttacctacatcttactt 4243515  T
Q  279 ttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||| || |||||||||||| |||||| ||  ||||||||||||||    
T  4243516 ttagtcggaatcaattttacataatctatcaactcaaaatcaatt 4243560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 20911848 - 20911812
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20911848 aatcaattttacataatcaattcactcaaaatcaatt 20911812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 35064962 - 35065046
Alignment:
Q  67 tttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||| ||||| | ||| | || |||||||||||  |||||||||||||||| |||||| |||||||| ||||  ||||||||    
T  35064962 tttggttccacttctcgaggggtcaaaattgattatggaggtgtagaattgattatgacatttttggttgctttcgagtagaatt 35065046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 2326900 - 2326805
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||| |||||| | ||| ||| |||||||||||||||||| || |||| ||| | | ||| | ||||||||||||||  || ||||||||||||    
T  2326900 agaattgattctattcgaaactagaatttgtaacttttaattctagaattaattctcaaacacatatttaaagttcaactcacctttacatgaatg 2326805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 16643977 - 16644040
Alignment:
Q  149 atttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaat 212  Q
    |||||||||||||||||||| ||||| ||  |||| ||| || |||||||||||||| ||||||    
T  16643977 atttattctacttgaagctataatttatagattttgattctagaattgatttttacatataaat 16644040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 25405719 - 25405762
Alignment:
Q  280 tattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||| || |||||||| |||||||||||||||||||||||||    
T  25405719 tattcaaaaacaattttacataatcaattcactcaaaatcaatt 25405762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 34155816 - 34155871
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    |||||||| | ||||||||||||| ||||| ||||||||||||| ||||| |||||    
T  34155816 cacttttagttagaatcaattttacataattaattcactcaaaaacaatttttatc 34155871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 41058821 - 41058891
Alignment:
Q  63 tatgtttggtttcacttttaga-gagatcgaaattgattataaaggtgtagaattgattttgacatgtttgg 133  Q
    ||||||||||| |||||||||| |||  | ||||||||| |||||| |||||||||||| ||||||||||||    
T  41058821 tatgtttggttccacttttagatgagc-ctaaattgattctaaaggagtagaattgattgtgacatgtttgg 41058891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 5835786 - 5835851
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||| |||||||| || ||||| ||| |||||||| || | |||||||||| ||||||||||||    
T  5835786 cacttttcattcaattcagttttaatcaaaatcaattctacaaaatcaattcaatcaaaatcaatt 5835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 16551960 - 16552046
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||||| ||||||||||  |||||||  ||||| || || |||||||||| |||||  |||||| ||||||||  |||||||||||||||    
T  16551960 attctccttgaagctaggatttgtagtttttagttctagaattgattttcacaca--aatttatagttcaactcacttttacatgaatg 16552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 21691409 - 21691312
Alignment:
Q  64 atgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctactt 161  Q
    |||||||||| ||||| ||||| || |  |||||||| |  |||||||||||||||| |||||| |||||||| | ||  |||| ||| |||||||||    
T  21691409 atgtttggttccacttctagagggaccagaattgattctggaggtgtagaattgattctgacatatttggttgttgtcgagtagtattgattctactt 21691312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 22250333 - 22250398
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||| ||||||||  | |||||| ||| ||||||||||| | ||||||||| |||||||||||||    
T  22250333 cacttcacattcaactcgcttttagtcataatcaattttacagaatcaattccctcaaaatcaatt 22250398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 31360991 - 31360950
Alignment:
Q  200 tttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||||||||||||| || ||||||||| |||||||||||||||    
T  31360991 tttacacataaatgtatagttcaacccacttttacatgaatg 31360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 33347260 - 33347167
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatga 238  Q
    ||||||| ||||||||||||| ||  |||||||| |||| |||  |||||| |||||| |||| |||| || |||||||   ||||||||||||    
T  33347260 tagaattaattctacttgaaggtaggatttgtaattttttattcgataattaatttttgcacacaaatatatagttcaattcacttttacatga 33347167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 33843584 - 33843653
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtt 130  Q
    ||||||||||||||||||| ||||| |  | ||||||||| || |||||||||||| ||| ||| |||||    
T  33843584 tgtatgtttggtttcacttctagagggtccaaaattgattctagaggtgtagaattaattctgaaatgtt 33843653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 38740336 - 38740287
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||| || ||||||||||| | |||||||||| ||||||||||||    
T  38740336 cacttttatccaaaatcaattttacaaaatcaattcattcaaaatcaatt 38740287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 50358175 - 50358134
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttgg 133  Q
    ||||||||| || |||||||||||||||||||||||| ||||    
T  50358175 aaattgattctagaggtgtagaattgattttgacatgcttgg 50358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 2256170 - 2256126
Alignment:
Q  277 ttttattcagaatcaattttatataatcaattcactcaaaatcaa 321  Q
    ||||||||| ||||||||||| | |||||||||||||| ||||||    
T  2256170 ttttattcataatcaattttacagaatcaattcactcataatcaa 2256126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 328
Target Start/End: Original strand, 43868134 - 43868313
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa 247  Q
    |||| |||||| |||||  ||| ||||||| ||||||| |  | | || ||||||||| ||||||||| | || ||   |||||||||| |||| ||| |    
T  43868134 aattgattctatttgaaattaagatttgtagcttttaactcaaaagttaatttttacatataaatttataatttaagtcacttttacataaatgtatcca 43868233  T
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattat 328  Q
    ||  ||||| |||||||| |||||   |||||||   ||||| ||||||| | |||||||||| |||||||||||| ||||    
T  43868234 aag-acaaatcactttactttcaacttacttttaactagaattaattttacaaaatcaattcattcaaaatcaatttttat 43868313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 44520486 - 44520558
Alignment:
Q  161 tgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctactttta 233  Q
    ||||| || |||||||||||||||||| || | || ||||||||| ||||||||| |||| |||  |||||||    
T  44520486 tgaagttagaatttgtaacttttaattctacatttaatttttacatataaatttacagttaaactcactttta 44520558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 45329770 - 45329814
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||| ||||||| |||||| ||| |||||||||||||    
T  45329770 aaattgattatagaggtgtaaaattgactttaacatgtttggttg 45329814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 329
Target Start/End: Original strand, 42913052 - 42913232
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaa 247  Q
    |||| ||| ||||||||| || ||||| ||| |||| ||| || ||||||| |||||| | || |||| | |||||| || ||||||| ||||| |||||    
T  42913052 aattgattatacttgaagttataatttataattttttattctagaattgatctttacaaacaattttatatttcaacttatttttacaagaatgtatcaa 42913151  T
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    ||| | ||  |  |||||||| ||| |||||||| | ||||| ||||||||| ||||||||||||||||||||||| |||||    
T  42913152 aaataaaatact-tttacatttaattcacttttagttagaattaattttatacaatcaattcactcaaaatcaatttttatc 42913232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 153 - 323
Target Start/End: Original strand, 31013021 - 31013190
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaaca 252  Q
    |||||||||||| |||  ||||||| | ||| | | || |||||||| | ||||| ||||||| | ||||||  |||| |||||||||| ||| ||| ||    
T  31013021 attctacttgaacctactatttgtagcctttgaatctagaattgattctaacacacaaatttagaattcaactcacttgtacatgaatgcatccaaa-ca 31013119  T
Q  253 caaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||| |||||||  | |||  |||||||| || |||||||||||||  |||||||||||||||||||||||    
T  31013120 caaatcactttatctacaactcacttttagtcggaatcaattttatggaatcaattcactcaaaatcaatt 31013190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 3845304 - 3845208
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattct 157  Q
    ||||||||||||| ||||||| |||  | | ||||||||| || |||||||||||||||||||||||||||| ||| | ||| |||||||| |||||    
T  3845304 tgtatgtttggttccacttttggagtaaccaaaattgattctagaggtgtagaattgattttgacatgtttgtttgatctcaagtagaattgattct 3845208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 144 - 323
Target Start/End: Original strand, 32111988 - 32112166
Alignment:
Q  144 gtagaatttattctacttgaagctaaaatttgtaacttttaa-ttatataattgatttttacacataaatttaaagttcaacctacttttacatgaatga 242  Q
    |||||||| |||||||||||||||| |||||||| |||||   || || |||||||||| | || |||||| |  ||| || | |||||||||| ||| |    
T  32111988 gtagaattgattctacttgaagctacaatttgtagcttttggcttttagaattgatttt-agacttaaattcattgttaaatccacttttacataaataa 32112086  T
Q  243 atcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||| ||| || |||  ||||| |||||||  || |||||| || ||||||||||| |||||||||||||||||||||||||    
T  32112087 atccaaa-cataaattacttttcattcaactcatttttatccataatcaattttacataatcaattcactcaaaatcaatt 32112166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 4526130 - 4526223
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||| |||||| ||| | ||| |||||||||||||| ||| || |||||||||||||||| ||||||| ||||||||  |||||||||| ||||    
T  4526130 aattgattctatttgtacctataatttgtaacttttgattttaaaattgatttttacacacaaatttatagttcaacacacttttacataaatg 4526223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 34867378 - 34867309
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtt 130  Q
    ||||||||||||| |||||||| |||   ||||||||||| || ||||||||||||||||||||||||||    
T  34867378 tgtatgtttggttccacttttacagaagccgaaattgattctacaggtgtagaattgattttgacatgtt 34867309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 52364055 - 52364137
Alignment:
Q  154 ttctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    |||||||||||||||  |||| || ||||| ||| ||||||||||||| | ||||||||||| ||||||||  ||||||||||    
T  52364055 ttctacttgaagctatgatttatagcttttgattctataattgattttcaaacataaatttacagttcaactcacttttacat 52364137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 35264493 - 35264321
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaaca 252  Q
    |||||||||||| ||| || ||  | ||||| ||| || |||||||||| |||| ||||||||  ||||||   | ||||||||||||| | | ||| ||    
T  35264493 attctacttgaaactagaaattagagcttttgattctagaattgattttaacacttaaatttattgttcaagtcatttttacatgaatgtacccaaa-ca 35264395  T
Q  253 caaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
     ||  |||||||| |||||  |||||||  | | ||||||||||| | ||||||||||||||||||||||||||    
T  35264394 taactcactttactttcaactcacttttggttacaatcaattttacagaatcaattcactcaaaatcaattatt 35264321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 52925803 - 52925714
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaat 150  Q
    |||||||| |||| ||||||| |||   || ||||||||| || ||||||| |||||||||||||||||||||||| | ||| |||||||    
T  52925803 tgtatgttcggttccacttttggaggagtcaaaattgattctagaggtgtataattgattttgacatgtttggttgctctcacgtagaat 52925714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 309
Target Start/End: Complemental strand, 31708317 - 31708166
Alignment:
Q  157 tacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaa 256  Q
    |||| |||||||  ||||||| ||||| ||| || |||||||| | ||||| ||||||| | ||||||  ||||||||||||||| |||  |||||||||    
T  31708317 tactcgaagctactatttgtagcttttgattctagaattgattctaacacacaaatttataattcaactcacttttacatgaatgtatc-caaacacaaa 31708219  T
Q  257 ccactttacattcaatccacttttattcagaatcaattttatataatcaattc 309  Q
    ||||||||    |||  |||||||| ||  ||||||||||| | |||||||||    
T  31708218 ccactttatcagcaactcacttttagtcctaatcaattttacaaaatcaattc 31708166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 323
Target Start/End: Complemental strand, 32523404 - 32523247
Alignment:
Q  171 atttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatga--atgaatcaa---aaacacaaaccactttac 265  Q
    ||||||| ||||| ||| || |||||||||||||||| ||||||| |||| |||  |||| |||||||  ||||||  |   ||||||||| |||||||     
T  32523404 atttgtagcttttgattctaaaattgatttttacacacaaatttagagtttaactcacttatacatgaacatgaatgcatccaaacacaaatcactttat 32523305  T
Q  266 attcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
     |||||   ||||||| ||| |||||||||||  ||||||||||||  ||||||||||    
T  32523304 cttcaactaacttttaatcaaaatcaattttacctaatcaattcacctaaaatcaatt 32523247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 47356295 - 47356239
Alignment:
Q  185 attatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||| ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  47356295 attatagaattgatttttacacataaatttaaagttcaaattgtttttacatgaatg 47356239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 53567984 - 53568048
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||| |||||||  |||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  53567984 acttttcattcaactcacttttaatcaaaatcaattttgtaaaatcaattcactcaaaatcaatt 53568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 3776463 - 3776506
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  3776463 aaattggttatagaggtgtagaattgattttgacatgtttggtt 3776506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 7262791 - 7262866
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||||||||| |||||  |  | ||||||||| || ||||| |||||||||| |||||||||||||||    
T  7262791 tgtatgtttggtttcactattagatgggccaaaattgattttagaggtgaagaattgattctgacatgtttggttg 7262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 37335012 - 37334949
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaa 321  Q
    |||||||| |||||  || ||||| || ||||||||||||||||||||||||||| ||||||||    
T  37335012 cactttaccttcaactcaattttagtcggaatcaattttatataatcaattcacttaaaatcaa 37334949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 39256572 - 39256639
Alignment:
Q  65 tgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||||||| ||||||| |||| ||| |||||  || || ||||||||||||||||||||||||||||    
T  39256572 tgtttggttccacttttggagaaatcaaaattagttctagaggtgtagaattgattttgacatgtttg 39256639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 52363958 - 52364017
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgatt 120  Q
    ||||||||||||| ||||||||||| || | |||||||||||| ||||||| ||||||||    
T  52363958 tgtatgtttggttccacttttagagggaccaaaattgattatagaggtgtataattgatt 52364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 54596712 - 54596807
Alignment:
Q  62 gtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattct 157  Q
    |||||||| ||||||  | || ||||| | ||||| ||| || ||||||| |||||||| ||||||||||||||| ||||| |||||||| |||||    
T  54596712 gtatgtttagtttcatctctaaagagaccaaaattaattttagaggtgtaaaattgattatgacatgtttggttgttttcaagtagaattgattct 54596807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 42375488 - 42375578
Alignment:
Q  113 aattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgattttta 203  Q
    |||||||| |||||| ||||||||   ||| |||||||  |||||||||||||||| |||||||| | ||| || ||| ||||||||||||    
T  42375488 aattgattctgacatttttggttgcggtcaagtagaatcaattctacttgaagctataatttgtagcgtttgatcatagaattgattttta 42375578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 42404202 - 42404292
Alignment:
Q  113 aattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgattttta 203  Q
    |||||||| |||||| ||||||||   ||| |||||||  |||||||||||||||| |||||||| | ||| || ||| ||||||||||||    
T  42404202 aattgattctgacatttttggttgcggtcaagtagaatcaattctacttgaagctataatttgtagcgtttgatcatagaattgattttta 42404292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 44771691 - 44771768
Alignment:
Q  147 gaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaac 224  Q
    ||||| ||||||| | || ||| |||||||| ||||| ||| || ||||||||||||||||| ||||| |||||||||    
T  44771691 gaattgattctacctaaatctagaatttgtagcttttgattctaaaattgatttttacacattaatttgaagttcaac 44771768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 49356457 - 49356392
Alignment:
Q  171 atttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    ||||||||||||  ||| ||||||||||||||||| |||||||||  ||| |||||||| ||||||    
T  49356457 atttgtaactttagattctataattgatttttacaaataaatttatggtttaacctactcttacat 49356392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 1441415 - 1441328
Alignment:
Q  227 acttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaa 315  Q
    |||||||| |||||| ||| ||| |||||| |||||||| |||||  ||||||||  |||||||||||||| | ||| |||||||||||    
T  1441415 acttttacgtgaatgtatctaaa-cacaaatcactttacgttcaactcacttttagacagaatcaattttacaaaattaattcactcaa 1441328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 42644303 - 42644379
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaatttt-atataatcaattcactcaaaatcaatt 323  Q
    ||||| ||| ||||||||||||||  ||||||||   | |||||||||| ||| |||||||||||||||||||||||    
T  42644303 aaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaatt 42644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 38022330 - 38022401
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||||||||||||||||| ||||  || | || |||||| || | ||||||||||||||||| ||||||||    
T  38022330 tgtatgtttggtttcacttctagaaggaccaaagttgattctagaagtgtagaattgattttggcatgtttg 38022401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 1290675 - 1290749
Alignment:
Q  62 gtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||| ||||| |||||  |   ||||||||| || ||||||||||||||||||||  ||||||||||    
T  1290675 gtatgtttggttccacttctagaggaactaaaattgattctagaggtgtagaattgattttgatttgtttggttg 1290749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 1441573 - 1441499
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||||| ||||||| |||  | | |||||  || || |||||||||||||| ||||||||||||||||    
T  1441573 tgtatgtttggttccacttttggagtaaccaaaattatttctagaggtgtagaattgagtttgacatgtttggtt 1441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 44489653 - 44489691
Alignment:
Q  285 agaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  44489653 agaatcaattttacattatcaattcactcaaaatcaatt 44489691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 48411004 - 48410914
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||||||| ||||||||||| | ||  |||||||| || | |||| ||||||||| ||| ||||||| ||| ||||  ||||||||    
T  48411004 tgtatgtttggttacacttttagaggggtcagaattgattctataagtgtggaattgattctgagatgtttgattgctttcgagtagaatt 48410914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 51285452 - 51285518
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacat 127  Q
    ||||||||||||| ||||||| |||    ||||||| ||| || |||||||||||||||||||||||    
T  51285452 tgtatgtttggttccactttttgagtagccgaaattaattctagaggtgtagaattgattttgacat 51285518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 25129714 - 25129641
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaagg-tgtagaattgattttgacatgtttgg 133  Q
    |||||||||||||||| |||| ||| | || ||||||||| || ||| |||||||||||||||  |||||||||    
T  25129714 tgtatgtttggtttcaattttcgaggggtcaaaattgattctagaggttgtagaattgattttatcatgtttgg 25129641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 25359663 - 25359602
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    |||||| ||||||||||||| || ||||||||  |||| ||| ||||||||||||| |||||    
T  25359663 agaattgattctacttgaagttagaatttgtagttttttattctataattgattttcacaca 25359602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 33792061 - 33792000
Alignment:
Q  180 ttttaattatataattgatttttacacataaatttaaagttcaacct-acttttacatgaat 240  Q
    |||| ||| |||||||||||||||||||||||||||  ||| || || ||||||||||||||    
T  33792061 ttttgattttataattgatttttacacataaatttattgtttaaactcacttttacatgaat 33792000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 35058065 - 35058118
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttt 201  Q
    |||| ||||||| ||||||||  ||||||| |||||||||||| ||||||||||    
T  35058065 aattgattctacatgaagctaggatttgtagcttttaattatagaattgatttt 35058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 40339071 - 40339148
Alignment:
Q  54 taataaatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgttt 131  Q
    |||||| |||||||||||||| |||||| ||  |  | ||||||||| || ||| ||| |||||||||||||||||||    
T  40339071 taataagtgtatgtttggtttaacttttggaagggccaaaattgattttagaggagtataattgattttgacatgttt 40339148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 21261324 - 21261223
Alignment:
Q  220 tcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatc 319  Q
    ||||| |||||||||||||||| ||| ||  |||||||||||||| || |||   |||||||  || |||||||| || ||||||||||   ||||||||    
T  21261324 tcaacttacttttacatgaatgtatccaa--cacaaaccactttaaatccaaattacttttaaccaaaatcaattctacataatcaattttatcaaaatc 21261227  T
Q  320 aatt 323  Q
    ||||    
T  21261226 aatt 21261223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 27825340 - 27825292
Alignment:
Q  275 acttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||| ||| ||||||||||||| ||| |||||| ||||||||||||    
T  27825340 acttttagtcataatcaattttataaaataaattcattcaaaatcaatt 27825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 30958145 - 30958209
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||||  ||| ||||  || ||||||||||| | |||||||||| ||||||||||||    
T  30958145 actttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 30973957 - 30974021
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||||  ||| ||||  || ||||||||||| | |||||||||| ||||||||||||    
T  30973957 actttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 44771864 - 44771900
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  44771864 aatcaattttacataatcaattcattcaaaatcaatt 44771900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 43501083 - 43501235
Alignment:
Q  108 tgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||| |||  ||||||| ||||| ||| || |||||||| | ||||     
T  43501083 tgtagaattgattctgacatgtttggttgctttcaagtagaattgattctacttgaaactaggatttgtagcttttgattttagaattgattctaacac- 43501181  T
Q  208 taaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccacttt 263  Q
     ||| ||| | ||||||  | ||||||||||||| || | ||||||||| ||||||    
T  43501182 -aaaattataattcaactcagttttacatgaatgtat-acaaacacaaatcacttt 43501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 17140666 - 17140737
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatc 329  Q
    ||||||||||||||| ||||||||| || ||||||||||||| |||| ||||||||||||| ||||||||||    
T  17140666 cactttacattcaattcacttttatccaaaatcaattttatagaatctattcactcaaaattaattattatc 17140737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 33019246 - 33019129
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaat 244  Q
    ||||||| ||| || ||||||||| |||||||| |||||  || || |||||||||| ||||||||||||| ||||||||  ||||||||||||||| ||    
T  33019246 tagaattgattatatttgaagctagaatttgtagcttttggttttagaattgattttcacacataaatttatagttcaactcacttttacatgaatgcat 33019147  T
Q  245 caaaaacacaaaccacttt 263  Q
    |  ||||||||| ||||||    
T  33019146 c-caaacacaaatcacttt 33019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 263
Target Start/End: Original strand, 13912781 - 13912899
Alignment:
Q  144 gtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaa 243  Q
    |||||||||||||||| |||||||| ||||||||| |||| ||| || |||| ||||||||||| |||||||  |||||||  | |||||||||| || |    
T  13912781 gtagaatttattctacatgaagctagaatttgtaattttttattctagaattaatttttacacacaaatttaccgttcaactcatttttacatgattgta 13912880  T
Q  244 tcaaaaacacaaaccacttt 263  Q
    ||  ||||||||| ||||||    
T  13912881 tc-caaacacaaatcacttt 13912899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 36374207 - 36374279
Alignment:
Q  59 aatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgttt 131  Q
    ||||||||||||| |||||||||  || | || ||||||||| |||||||||| |||||||||||||||||||    
T  36374207 aatgtatgtttgggttcacttttgaagcggtcaaaattgattttaaaggtgtataattgattttgacatgttt 36374279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 37745860 - 37745784
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaattattatctttgctgaaccaaacatacac 350  Q
    ||||||||  || ||||||||||| |||||||||||||||||||||||||||||||   ||  ||||||||||||||    
T  37745860 cacttttagacaaaatcaattttacataatcaattcactcaaaatcaattattatcaccgcaaaaccaaacatacac 37745784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 11759847 - 11759772
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||||||| ||||| |||||  |||||||| ||| ||||||||||| | |||||||||||||||| ||||||    
T  11759847 aaacacaaaccaatttaccttcaactcacttttaatcaaaatcaattttacaaaatcaattcactcaaactcaatt 11759772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 9943318 - 9943438
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattcta-ctt 161  Q
    ||||||||||| ||| ||| |||  | | ||||||||| | |||||||| |||||||||| ||||||||||||| | |||  ||||||| |||||| |||    
T  9943318 tatgtttggttccacatttggagcaaccaaaattgattctgaaggtgtaaaattgattttaacatgtttggttgctctcacttagaattgattctagctt 9943417  T
Q  162 gaagctaaaatttgtaacttt 182  Q
    |||||||  ||||||| ||||    
T  9943418 gaagctaggatttgtagcttt 9943438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 33503014 - 33502966
Alignment:
Q  88 atcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  33503014 atcgaaattgattctgaaggtgtaaaattgattttgacatgtttggttg 33502966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 36307073 - 36307137
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||||| |||||  ||||||||| || ||||||||||| ||||||||||||||||| |||||||    
T  36307073 actttacgttcaactcacttttatccataatcaattttacataatcaattcactcaagatcaatt 36307137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 42740975 - 42741063
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    |||| ||||||||||||||||| ||||||| ||||| ||| || |||||||||||||||  |||||||  || ||||  ||||||||||    
T  42740975 aattgattctacttgaagctaagatttgtagcttttgattctagaattgatttttacactcaaatttactgtccaactcacttttacat 42741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 43717235 - 43717351
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctact 160  Q
    |||| |||||||||||||||| |||   |  ||||||||| || | ||||||||||||||||||||||||||| |  |     |||||||| ||||||||    
T  43717235 tgtacgtttggtttcacttttggaggtgttaaaattgattctagatgtgtagaattgattttgacatgtttggatattgattagtagaattgattctact 43717334  T
Q  161 tgaagctaaaatttgta 177  Q
    |||||||| ||||||||    
T  43717335 tgaagctagaatttgta 43717351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 7632731 - 7632640
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaactttt 183  Q
    ||||||||| ||||||||| |||||||||   ||||||||| |||  |||  |||||| | || |||||||||||||||||||||| |||||    
T  7632731 aaattgattctaaaggtgtcgaattgattccaacatgtttgattgccttcgagtagaactgatcctacttgaagctaaaatttgtagctttt 7632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 33502258 - 33502354
Alignment:
Q  171 atttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattca 270  Q
    ||||||||||||| ||| || |||||||||||||||| | ||||| ||||||||  ||||||||   |||| |||  ||||||||| |||||||||||||    
T  33502258 atttgtaacttttgattctaaaattgatttttacacacatatttatagttcaactcacttttac---aatgtatc-caaacacaaatcactttacattca 33502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 42982447 - 42982521
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||||| ||||||| |||  ||| ||||| ||| ||||  ||||||| ||||||||||||||||||||    
T  42982447 tgtatgtttggttccacttttggaggaatccaaattaattctaaacatgtagaactgattttgacatgtttggtt 42982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 10644601 - 10644686
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctactttta 233  Q
    |||||||||||||||||| ||| |||||||  |||| |||||| |||| | ||| | ||||||||||| ||||||||  |||||||    
T  10644601 aatttattctacttgaagttaagatttgtagtttttcattatagaattaactttcatacataaatttatagttcaactcactttta 10644686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 15928596 - 15928551
Alignment:
Q  91 gaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||    
T  15928596 gaaattgattctggaggtgtagaattgattttgacatgtttggttg 15928551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 21234666 - 21234577
Alignment:
Q  94 attgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaactttt 183  Q
    ||||||| || ||| ||||||||||||||| || ||||||  | | | | |||||||| |||||||||||||||| |||||||| |||||    
T  21234666 attgattttagaggagtagaattgattttggcaggtttggacgttgtaaagtagaattgattctacttgaagctagaatttgtagctttt 21234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 37283311 - 37283428
Alignment:
Q  206 cataaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatca 305  Q
    ||||||| || |||||||| ||||||||| |||||  |||  ||| |||||  | ||||  |||||  |||||||| ||  |||||||||||||||||||    
T  37283311 cataaatatatagttcaacttacttttacctgaatatatctcaaatacaaataattttattttcaactcacttttaatctaaatcaattttatataatca 37283410  T
Q  306 attcactcaaaatcaatt 323  Q
    ||| | ||||||||||||    
T  37283411 atttagtcaaaatcaatt 37283428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 37420358 - 37420317
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttgg 133  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  37420358 aaattgattctagaggtgtagaattgattttgacatgtttgg 37420317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 42982547 - 42982635
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||||||||||||||| || ||||| ||||| |||  | |||||||||||||||| |||||||   | ||||  |||||||||||||||    
T  42982547 attctacttgaagctagaaattgtagcttttgattccagaattgatttttacacacaaatttattttacaactcacttttacatgaatg 42982635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 44439174 - 44439218
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  44439174 aaattgattctaaaggtgttgaattaattttgacatgtttggttg 44439218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 6327159 - 6327084
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagtt 220  Q
    ||||||| |||||||||||| ||||||||||||  |||| ||| || |||| ||| | ||| ||||||||||||||    
T  6327159 tagaattgattctacttgaaactaaaatttgtagtttttgattctaaaattaattctaacatataaatttaaagtt 6327084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 7629755 - 7629829
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaa-attgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||||||| ||||||| ||| || | || ||||||| || ||||||||||||||||||| |||||||||||    
T  7629755 tgtatgtttggttccacttttggag-gagccaagattgattctagaggtgtagaattgattttgtcatgtttggtt 7629829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 11760016 - 11759941
Alignment:
Q  57 taaatgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    |||||||||||||| || || || |||||||||| |||||||||    | |||||||||||||| |||||||||||    
T  11760016 taaatgtatgtttgattccatttctagagagatcaaaattgattccggaagtgtagaattgattctgacatgtttg 11759941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 40582673 - 40582716
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||| || |||||||||||||||||| ||||||||||||    
T  40582673 aaattgattctagaggtgtagaattgattttaacatgtttggtt 40582716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 44439249 - 44439340
Alignment:
Q  146 agaatttattcta-cttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacat 236  Q
    |||||| |||||| ||||||||||||||||| | ||||| ||| || |||||||||| ||||  |||||||  |||||||  ||||||||||    
T  44439249 agaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactcacttttacat 44439340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 5533113 - 5533027
Alignment:
Q  153 attctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaa 239  Q
    ||||||||||||||||  ||||||| ||||| ||| |  |||||||||  ||||||||||||| | ||||||  || ||||||||||    
T  5533113 attctacttgaagctactatttgtagcttttgattcttaaattgatttaaacacataaatttataattcaactcacatttacatgaa 5533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 6327256 - 6327202
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaat 115  Q
    |||||||||||||||||||||||||| | | ||||||||| || |||| ||||||    
T  6327256 tgtatgtttggtttcacttttagagaaaacaaaattgattctagaggtttagaat 6327202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 7630361 - 7630399
Alignment:
Q  113 aattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  7630361 aattgattttgacatgtttggttgctttcaagtagaatt 7630399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 323
Target Start/End: Complemental strand, 11650730 - 11650684
Alignment:
Q  277 ttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    ||||| ||| |||||| |||| |||||||||||||||||||||||||    
T  11650730 ttttagtcataatcaaatttacataatcaattcactcaaaatcaatt 11650684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 42650362 - 42650432
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattattat 328  Q
    ||||||||||||||   | |||| | || |||||| |||| ||||||||||||||||||||||||| ||||    
T  42650362 cactttacattcaacttagttttgtccacaatcaaatttacataatcaattcactcaaaatcaattcttat 42650432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 4007180 - 4007115
Alignment:
Q  259 actttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatta 324  Q
    ||||| |||||||  ||||||||| || ||||||||||| | ||||||| |||| |||||||||||    
T  4007180 acttttcattcaactcacttttatccataatcaattttacaaaatcaatccacttaaaatcaatta 4007115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 10618928 - 10618863
Alignment:
Q  258 cactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||| |||||| || |||||   ||||||||||||| | |||||||||||| ||||||||||    
T  10618928 cactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 10618863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 30503343 - 30503392
Alignment:
Q  301 aatcaattcactcaaaatcaattattatctttgctgaaccaaacatacac 350  Q
    ||||||||||||||||||| |||||| || ||||  ||||||||||||||    
T  30503343 aatcaattcactcaaaatcgattattgtcattgcataaccaaacatacac 30503392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 33047742 - 33047673
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    ||||||||||||| ||| ||||| || | ||||||||| |  |||||||||||||||| | |||||||||    
T  33047742 tatgtttggtttcgcttctagagggaccaaaattgattttggaggtgtagaattgattctcacatgtttg 33047673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36893531 - 36893490
Alignment:
Q  192 aattgatttttacacataaatttaaagttcaacctactttta 233  Q
    |||||||||||||| ||||||||||||| ||||| |||||||    
T  36893531 aattgatttttacaaataaatttaaagtccaacccactttta 36893490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 12037056 - 12037112
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttt 201  Q
    ||||||| |||||| ||||| |||||||||||| ||||| ||| || ||||||||||    
T  12037056 tagaattgattctagttgaaactaaaatttgtagcttttgattctacaattgatttt 12037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 14110581 - 14110641
Alignment:
Q  63 tatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttg 123  Q
    ||||||| ||||||||||| ||||  || |||||||||  | |||||||||||||||||||    
T  14110581 tatgtttcgtttcacttttggagaagtcaaaattgatttcagaggtgtagaattgattttg 14110641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 31453381 - 31453453
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagtt 220  Q
    |||| ||||||||||||||||||||||||  ||||| ||| |  |||||||||| || || ||||||| ||||    
T  31453381 aattgattctacttgaagctaaaatttgttccttttgattctgaaattgattttcacgcacaaatttagagtt 31453453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 31785718 - 31785762
Alignment:
Q  64 atgtttggtttcacttttagagagatcgaaattgattataaaggt 108  Q
    ||||||||||||| |||||||| |||| ||||||||| |||||||    
T  31785718 atgtttggtttcagttttagagggatcaaaattgattctaaaggt 31785762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 31719 - 31794
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||| ||||| ||||| || | ||||||||| || |||||||||||||||| |||||||||||||||    
T  31719 tgtatgtttggttccacttctagagtgaccaaaattgattctagaggtgtagaattgattctgacatgtttggttg 31794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 6654179 - 6654062
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatc 245  Q
    |||||| ||||||||||||||||  ||||||| ||||||||| || | |||||||| ||||| ||||||| ||||||| | |||| ||||| || |||||    
T  6654179 agaattaattctacttgaagctaggatttgtagcttttaattctagatttgattttcacacagaaatttatagttcaaaccacttctacataaacgaatc 6654080  T
Q  246 aaaaacacaaaccacttta 264  Q
      ||||||||| |||||||    
T  6654079 -caaacacaaatcacttta 6654062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 31812203 - 31812277
Alignment:
Q  62 gtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||||||||||||||| |||  | | ||||| |||||| |||| |||||||||||||||||||||||||||    
T  31812203 gtatgtttggtttcacttttggagtaagcaaaattcattatagaggtctagaattgattttgacatgtttggttg 31812277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 3482041 - 3482137
Alignment:
Q  145 tagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    ||||||| ||| ||||||||| ||| ||||||| | ||| ||| || |||||||||| ||||| || |||| |||||||| ||||||||||||||||    
T  3482041 tagaattgattatacttgaagttaagatttgtagcctttgattttagaattgattttcacacacaagtttatagttcaacttacttttacatgaatg 3482137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 5724717 - 5724653
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaat 212  Q
    |||| ||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||| ||||    
T  5724717 aattgattctacttgaagctaggatttgtaactttttattctataattgatttttacacacaaat 5724653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 323
Target Start/End: Complemental strand, 765475 - 765298
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatc 245  Q
    |||||| ||||||||||||||||  ||||||| ||||| ||| || |||||||| ||| | |  |||||| ||||||||  | ||||||| ||| ||||     
T  765475 agaattgattctacttgaagctatgatttgtagcttttgattctagaattgattattaaaga--aatttatagttcaactcatttttacaagaa-gaatg 765379  T
Q  246 aa---aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
     |   ||||||||| |||||||| |||||   ||||||| | ||||||||||||| | ||||| |||||||||||||||||    
T  765378 tatggaaacacaaatcactttactttcaacttacttttagttagaatcaattttacacaatcatttcactcaaaatcaatt 765298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 4910801 - 4910876
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||| ||||||||||||||    |||||||| | || |||||||||||||| |||||||||||||||    
T  4910801 tgtatgtttggttccacttttagagagactataattgattctgaatgtgtagaattgattctgacatgtttggttg 4910876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 34620810 - 34620853
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34620810 aaattgattctaaaggtgtagaattgattttgacatgtttggtt 34620853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 34748247 - 34748290
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34748247 aaattgattctaaaggtgtagaattgattttgacatgtttggtt 34748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 323
Target Start/End: Complemental strand, 957745 - 957537
Alignment:
Q  113 aattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaat 212  Q
    ||||||||  |||||||||| ||| ||||  |||||||| ||| |||||| |||||| |||| ||  |||| |||  ||||| |||||||||||| |||     
T  957745 aattgattacgacatgtttgattgctttcgagtagaattgattttacttgtagctaagatttatagtttttgattccataatcgatttttacacacaaac 957646  T
Q  213 ttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcact 312  Q
    ||||| || |||  | ||||||||||||| |||  ||||| ||| || ||||  || | | |||||||| ||| ||| ||||||||| ||| |||||| |    
T  957645 ttaaaatttaactcatttttacatgaatgtatc-caaacataaatcattttatctt-atttcacttttactcaaaataaattttatagaattaattcatt 957548  T
Q  313 caaaatcaatt 323  Q
    |||||||||||    
T  957547 caaaatcaatt 957537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 5724822 - 5724732
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||||||| ||||| ||||| |  | ||||| ||| || | |||||||||||||| |||||||||||| || ||||||||||||||    
T  5724822 tgtatgtttggttccacttctagaggggccaaaattaattctagaagtgtagaattgattctgacatgtttggatgctttcaggtagaatt 5724732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 26550447 - 26550487
Alignment:
Q  96 tgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  26550447 tgattatagaggtgtagaattgattttgacatgtttggttg 26550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 6896077 - 6895923
Alignment:
Q  108 tgtagaattgattttgacatgtttggttggtttcaggtagaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    ||||||||||||| ||||||||||||||| | ||  ||| |||| ||||||| ||||| ||  ||||||| ||||| ||| || |||| |||||  ||||    
T  6896077 tgtagaattgattatgacatgtttggttgttgtcgagtacaattgattctacctgaagttaggatttgtagcttttgattctagaatttattttcgcaca 6895978  T
Q  208 taaatttaaagttcaacctacttttacatgaatgaatcaaaaacacaaaccacttt 263  Q
       ||||| || | ||   ||||||||||||||| |||||||| ||||||||||||    
T  6895977 cgtatttatagataaattcacttttacatgaatgtatcaaaaa-acaaaccacttt 6895923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 26280533 - 26280588
Alignment:
Q  96 tgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |||  |||||||||    
T  26280533 tgattttaaaggtgtagaattgattttgacatgtttgattgttttttggtagaatt 26280588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 8854924 - 8855018
Alignment:
Q  154 ttctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaa 248  Q
    |||||| |||||||| ||||||||  |||| | |||| |||||||||||||| | |||||||  ||| ||| ||||||||||| |||| ||||||    
T  8854924 ttctacatgaagctacaatttgtagtttttgactatagaattgatttttacatacaaatttatggttgaacttacttttacattaatgtatcaaa 8855018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 29240644 - 29240554
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    ||||||||||||| ||||||| | |  ||| ||||||||| || ||||||| |||||||||||||||||| || |  ||||| ||||||||    
T  29240644 tgtatgtttggttccacttttgggggaatcaaaattgattctagaggtgtaaaattgattttgacatgttaggatattttcaagtagaatt 29240554  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 46250 - 46201
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||||| | ||||||||||||| | |||||||||||||||||||||||    
T  46250 cacttttagttagaatcaattttacagaatcaattcactcaaaatcaatt 46201  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 4910906 - 4910999
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatg 241  Q
    |||| ||||||||||||||||  ||||||| ||||| ||| || |||||||||| ||| | ||||||| ||||| ||  |||||||||| ||||    
T  4910906 aattgattctacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactcacttttacataaatg 4910999  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 30927039 - 30927100
Alignment:
Q  146 agaatttattctacttgaagctaaaatttgtaacttttaattatataattgatttttacaca 207  Q
    |||||| ||| ||||||||||||| ||| ||| ||||| |||||| ||||||||||||||||    
T  30927039 agaattgattatacttgaagctaagattcgtagcttttgattatagaattgatttttacaca 30927100  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 434312 - 434232
Alignment:
Q  160 ttgaagctaaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaat 240  Q
    |||||| |||||||  || ||||| ||| || |||||||||||| ||||||||||||| ||||||  ||||||||| ||||    
T  434312 ttgaagttaaaattaatagcttttgattttagaattgatttttatacataaatttaaatttcaactcacttttacacgaat 434232  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 17225870 - 17225950
Alignment:
Q  168 aaaatttgtaacttttaattatataattgatttttacacataaatttaaagttcaacctacttttacatgaatgaatcaaa 248  Q
    |||| ||||| ||||| ||| || |||||||||||||| | ||||||| ||||||||  | ||||||||||||| ||||||    
T  17225870 aaaaattgtagcttttgattctagaattgatttttacatacaaatttatagttcaactcagttttacatgaatgtatcaaa 17225950  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 34063259 - 34063299
Alignment:
Q  95 ttgattataaaggtgtagaattgattttgacatgtttggtt 135  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  34063259 ttgattctacaggtgtagaattgattttgacatgtttggtt 34063299  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 4080431 - 4080392
Alignment:
Q  93 aattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  4080431 aattgattctaaaggtgtaaaattgattttgacatgtttg 4080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 33136674 - 33136600
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||| ||||||||||||||| || ||  | ||||| ||| || ||||||| ||||||||||||||||||||||||    
T  33136674 tgtatatttggtttcacttttggaaagc-caaaattaattctagaggtgtataattgattttgacatgtttggttg 33136600  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 2002609 - 2002567
Alignment:
Q  109 gtagaattgattttgacatgtttggttggtttcaggtagaatt 151  Q
    |||||||||||||||||||||||||||| ||||  ||||||||    
T  2002609 gtagaattgattttgacatgtttggttgttttcgagtagaatt 2002567  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 18690620 - 18690662
Alignment:
Q  116 tgattttgacatgtttggttggtttcaggtagaatttattcta 158  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||    
T  18690620 tgattttgacatgtttggttgctttcaagtagaattgattcta 18690662  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 33141893 - 33141824
Alignment:
Q  66 gtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||||||||||||  | ||||||||| ||   ||||| |||||||||||| |||||||||||    
T  33141893 gtttggtttcacttttagagagc-caaaattgattctagcagtgtaaaattgattttgatatgtttggttg 33141824  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 3525028 - 3525097
Alignment:
Q  254 aaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaatt 323  Q
    |||||| ||| |||||||  ||||||||  || ||||||||||| |||||||||||| ||||||| ||||    
T  3525028 aaaccagtttgcattcaactcacttttagccacaatcaattttacataatcaattcattcaaaattaatt 3525097  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 8551152 - 8551075
Alignment:
Q  248 aaacacaaaccactttacattcaatccacttttattcagaatcaattttatataatcaattcactcaaaatcaattat 325  Q
    ||||| ||| |||||| || ||||  |||||||| |||||||||||| |||  |||||||||  ||||||||||||||    
T  8551152 aaacataaatcacttttcactcaactcacttttaatcagaatcaattatatggaatcaattctatcaaaatcaattat 8551075  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 136
Target Start/End: Complemental strand, 31305996 - 31305967
Alignment:
Q  107 gtgtagaattgattttgacatgtttggttg 136  Q
    ||||||||||||||||||||||||||||||    
T  31305996 gtgtagaattgattttgacatgtttggttg 31305967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 1485339 - 1485267
Alignment:
Q  61 tgtatgtttggtttcacttttagagagatcgaaattgattataaaggtgtagaattgatt-ttgacatgtttg 132  Q
    ||||| ||||||||||||| ||||| | || | || |||| || |||||||||||||||| ||||||||||||    
T  1485339 tgtatatttggtttcacttctagaggggtcaatatggattctagaggtgtagaattgattcttgacatgtttg 1485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 3436832 - 3436788
Alignment:
Q  287 aatcaattttatataatcaattcactcaaaatcaattattatctt 331  Q
    ||||||||||||| |||||| ||||| |||||||||| |||||||    
T  3436832 aatcaattttataaaatcaactcactaaaaatcaattcttatctt 3436788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 3436969 - 3436917
Alignment:
Q  148 aatttattctacttgaagctaaaatttgtaacttttaattatataattgattt 200  Q
    |||| |||||| ||||| ||| |||||||||||||| ||| ||||||||||||    
T  3436969 aattgattctagttgaatctataatttgtaacttttgattctataattgattt 3436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 10055230 - 10055190
Alignment:
Q  92 aaattgattataaaggtgtagaattgattttgacatgtttg 132  Q
    |||||||||||||| ||||||||| ||||||||||| ||||    
T  10055230 aaattgattataaacgtgtagaatcgattttgacatttttg 10055190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 19601509 - 19601457
Alignment:
Q  171 atttgtaacttttaattatataattgatttttacacataaatttaaagttcaa 223  Q
    ||||||| ||||| ||| ||||| ||||||||||| ||||||||| |||||||    
T  19601509 atttgtagcttttgattctataactgatttttacaaataaatttatagttcaa 19601457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 29937630 - 29937578
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
    |||||||| ||||||||||||||| |||||  ||||||| ||||| |||||||    
T  29937630 cacttttagtcagaatcaattttacataatttattcactaaaaatgaattatt 29937578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 34026137 - 34026101
Alignment:
Q  285 agaatcaattttatataatcaattcactcaaaatcaa 321  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  34026137 agaatcaattttacataatcaagtcactcaaaatcaa 34026101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 2953 - 2901
Alignment:
Q  274 cacttttattcagaatcaattttatataatcaattcactcaaaatcaattatt 326  Q
    |||||||| || ||||| ||||||   ||||||||||||||||||||||||||    
T  2953 cacttttaatcggaatctattttacgaaatcaattcactcaaaatcaattatt 2901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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