View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11971_low_23 (Length: 263)
Name: NF11971_low_23
Description: NF11971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11971_low_23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 263
Target Start/End: Original strand, 36524899 - 36525144
Alignment:
| Q |
18 |
tcaattgataaagatatagggagaagatcttttaaagattggggaagtatttgcttcaacaagggaactacaaatagtactaaaaagaaggactttgttg |
117 |
Q |
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| T |
36524899 |
tcaattgataaagatatagggagaagatcttttaaagattggggaagtatttgcttcaacaagggaactacaaatagtactaaaaagaaggactttgttg |
36524998 |
T |
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| Q |
118 |
gtataaatattcaagaaagttttgatcagcttgaaagtggacaatcaattgaatttatttttggagatgaaatacaagaagaaaatgagggttataccta |
217 |
Q |
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| T |
36524999 |
gtataaatattcaagaaagttttgatcagcttgaaagtggacaatcaattgaatttatttttggagatgaaatacaagaagaaaatgagggttataccta |
36525098 |
T |
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| Q |
218 |
taagcctatgagtctaagagaccatatataatttccagattttgat |
263 |
Q |
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| T |
36525099 |
taagcctatgagtctaagagaccatatatcatttccagattttgat |
36525144 |
T |
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