View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11972_high_9 (Length: 266)

Name: NF11972_high_9
Description: NF11972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11972_high_9
NF11972_high_9
[»] chr5 (26 HSPs)
chr5 (1-242)||(16320993-16321234)
chr5 (23-86)||(29632693-29632756)
chr5 (27-86)||(42522714-42522773)
chr5 (23-85)||(14001113-14001175)
chr5 (21-86)||(37516549-37516613)
chr5 (27-83)||(833878-833934)
chr5 (31-89)||(835630-835688)
chr5 (27-85)||(14861840-14861898)
chr5 (27-85)||(23085337-23085395)
chr5 (17-85)||(4460506-4460574)
chr5 (27-83)||(27598358-27598414)
chr5 (147-210)||(11255345-11255408)
chr5 (27-86)||(17822176-17822235)
chr5 (27-86)||(27175183-27175242)
chr5 (10-73)||(29686204-29686267)
chr5 (27-74)||(37516885-37516932)
chr5 (27-85)||(2344300-2344358)
chr5 (51-85)||(28727922-28727956)
chr5 (148-210)||(33591284-33591346)
chr5 (23-85)||(41863309-41863370)
chr5 (27-80)||(1539316-1539369)
chr5 (165-210)||(8835861-8835906)
chr5 (33-86)||(12095583-12095636)
chr5 (36-85)||(14725293-14725342)
chr5 (165-210)||(31377557-31377602)
chr5 (41-85)||(3945184-3945228)
[»] chr7 (14 HSPs)
chr7 (17-85)||(38237470-38237538)
chr7 (17-85)||(32358869-32358937)
chr7 (31-86)||(29285584-29285639)
chr7 (26-85)||(35338368-35338427)
chr7 (36-85)||(8146065-8146114)
chr7 (137-210)||(38167500-38167572)
chr7 (27-86)||(5468095-5468154)
chr7 (35-85)||(1292086-1292136)
chr7 (27-85)||(24649987-24650045)
chr7 (35-85)||(44410538-44410588)
chr7 (28-81)||(4094294-4094347)
chr7 (165-210)||(40186004-40186049)
chr7 (24-76)||(22711468-22711520)
chr7 (166-210)||(44291841-44291885)
[»] chr4 (20 HSPs)
chr4 (23-85)||(20004771-20004833)
chr4 (35-85)||(47393564-47393614)
chr4 (27-86)||(45637842-45637901)
chr4 (36-86)||(27746684-27746734)
chr4 (27-73)||(47683472-47683518)
chr4 (27-85)||(48458448-48458506)
chr4 (22-76)||(54055329-54055383)
chr4 (19-83)||(4523875-4523939)
chr4 (17-61)||(31444947-31444991)
chr4 (18-81)||(1237529-1237592)
chr4 (27-74)||(24916044-24916091)
chr4 (27-86)||(48171803-48171862)
chr4 (148-210)||(3930978-3931040)
chr4 (53-83)||(51187444-51187474)
chr4 (32-85)||(10214326-10214379)
chr4 (165-210)||(24744396-24744441)
chr4 (17-69)||(4608666-4608718)
chr4 (23-59)||(26509612-26509648)
chr4 (24-76)||(28477051-28477103)
chr4 (58-86)||(50377000-50377028)
[»] chr6 (12 HSPs)
chr6 (24-85)||(32279608-32279669)
chr6 (27-85)||(8866864-8866922)
chr6 (49-91)||(32938875-32938917)
chr6 (166-210)||(33490388-33490432)
chr6 (23-90)||(9155476-9155543)
chr6 (27-81)||(3533239-3533293)
chr6 (27-81)||(8478986-8479040)
chr6 (29-91)||(22793683-22793745)
chr6 (36-85)||(8872564-8872613)
chr6 (31-80)||(14356673-14356722)
chr6 (166-210)||(742223-742267)
chr6 (30-78)||(4119120-4119168)
[»] chr2 (21 HSPs)
chr2 (31-90)||(30675540-30675599)
chr2 (23-85)||(11694206-11694268)
chr2 (27-85)||(23914591-23914649)
chr2 (25-80)||(727757-727812)
chr2 (23-73)||(11681632-11681682)
chr2 (27-85)||(35468739-35468797)
chr2 (34-90)||(352378-352434)
chr2 (166-210)||(2371423-2371467)
chr2 (24-76)||(28416977-28417029)
chr2 (148-223)||(21866523-21866598)
chr2 (30-85)||(23914790-23914845)
chr2 (27-85)||(744903-744961)
chr2 (23-85)||(12541471-12541533)
chr2 (17-86)||(1071672-1071741)
chr2 (23-76)||(11090119-11090172)
chr2 (58-91)||(27591116-27591149)
chr2 (35-80)||(27649229-27649274)
chr2 (165-210)||(39429256-39429301)
chr2 (27-91)||(19133881-19133945)
chr2 (34-90)||(26966406-26966462)
chr2 (58-86)||(32908701-32908729)
[»] chr1 (22 HSPs)
chr1 (27-86)||(2653351-2653410)
chr1 (17-83)||(49840468-49840534)
chr1 (24-85)||(10427353-10427414)
chr1 (17-86)||(15881351-15881420)
chr1 (35-86)||(30658098-30658149)
chr1 (31-85)||(35632991-35633045)
chr1 (52-90)||(40368078-40368116)
chr1 (165-210)||(15910424-15910469)
chr1 (23-76)||(27348981-27349034)
chr1 (27-83)||(44717358-44717414)
chr1 (52-83)||(12214091-12214122)
chr1 (23-85)||(12294461-12294522)
chr1 (17-79)||(21966258-21966320)
chr1 (35-85)||(27506568-27506618)
chr1 (10-80)||(42470383-42470453)
chr1 (31-85)||(42561646-42561700)
chr1 (23-76)||(5257081-5257134)
chr1 (23-76)||(9147762-9147815)
chr1 (27-91)||(11067088-11067152)
chr1 (27-90)||(13288619-13288683)
chr1 (49-81)||(14259170-14259202)
chr1 (58-86)||(42560983-42561011)
[»] chr8 (22 HSPs)
chr8 (27-85)||(4438548-4438606)
chr8 (27-85)||(3501388-3501446)
chr8 (27-76)||(31261300-31261349)
chr8 (21-85)||(13206116-13206180)
chr8 (27-83)||(41372490-41372546)
chr8 (27-86)||(2442258-2442317)
chr8 (27-86)||(15920076-15920134)
chr8 (144-210)||(1103861-1103927)
chr8 (23-76)||(1351699-1351753)
chr8 (23-81)||(3541199-3541257)
chr8 (17-80)||(6629168-6629235)
chr8 (53-83)||(11578973-11579003)
chr8 (131-185)||(18575706-18575760)
chr8 (14-76)||(34151136-34151197)
chr8 (32-85)||(16338018-16338071)
chr8 (33-90)||(23038497-23038554)
chr8 (26-78)||(4437486-4437538)
chr8 (27-86)||(11876424-11876484)
chr8 (27-86)||(11891431-11891491)
chr8 (166-210)||(20188260-20188304)
chr8 (166-210)||(20207329-20207373)
chr8 (166-210)||(31097988-31098032)
[»] chr3 (19 HSPs)
chr3 (23-85)||(2594493-2594555)
chr3 (17-85)||(13867235-13867302)
chr3 (27-86)||(17583223-17583282)
chr3 (148-210)||(2446654-2446716)
chr3 (148-210)||(5272847-5272909)
chr3 (165-210)||(46529238-46529283)
chr3 (31-90)||(37681357-37681416)
chr3 (23-81)||(65971-66029)
chr3 (33-91)||(19578690-19578748)
chr3 (23-81)||(21594488-21594546)
chr3 (23-85)||(47409613-47409675)
chr3 (27-85)||(51103422-51103479)
chr3 (27-80)||(35963807-35963859)
chr3 (28-85)||(36643583-36643640)
chr3 (165-210)||(37125936-37125981)
chr3 (17-86)||(55091552-55091620)
chr3 (166-210)||(8827692-8827736)
chr3 (134-202)||(35512546-35512614)
chr3 (35-79)||(48240026-48240070)
[»] scaffold1777 (1 HSPs)
scaffold1777 (28-81)||(595-648)
[»] scaffold0047 (1 HSPs)
scaffold0047 (23-81)||(65541-65599)
[»] scaffold1017 (1 HSPs)
scaffold1017 (27-86)||(2039-2098)
[»] scaffold0013 (1 HSPs)
scaffold0013 (31-90)||(101108-101167)
[»] scaffold1360 (1 HSPs)
scaffold1360 (148-210)||(358-420)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-80)||(36811-36864)


Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 16320993 - 16321234
Alignment:
Q  1 atttttatctttgcagtgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatttccttttaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16320993 atttttatctttgcattgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatttccttttaa 16321092  T
Q  101 aaaattataacatcattatttaaaaatttgtttaagacaaattctactcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaa 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16321093 aaaaatataacatcattatttaaaaatttgtttaagacaaattctactcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaa 16321192  T
Q  201 cttaaataaattttttaatttaatttaaagccctttcatcgc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16321193 cttaaataaattttttaatttaatttaaagccctttcatcgc 16321234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 29632756 - 29632693
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||| ||||||||||| ||||||| ||||||| ||||| |||||||||||||| |||||||||    
T  29632756 aaaaattataacaaataaaatataaattcttatctttttaaatgacaccaacaaaataacatta 29632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 42522714 - 42522773
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| || ||||||||||||| ||| ||||||||||||||||||||    
T  42522714 aatataacaaatataataaaaattcttatattttttaataacaccaacaatataacatta 42522773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 14001113 - 14001175
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||||||| ||||||| ||||||| ||||| ||||||| |||||| ||||||||    
T  14001113 aaaaaatataacaaatataatataaattcttatctttttgaatgacatcaacaaaataacatt 14001175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 37516549 - 37516613
Alignment:
Q  21 acaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||| ||||||| ||||||| ||||||| ||||| |||||||||||||| |||||||||    
T  37516549 acaaaaaatatgacaaatataatataaattcttat-tttttgaatgacaccaacaaaataacatta 37516613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 833934 - 833878
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||||||||| ||| ||| ||||||| ||||| |||||||||||||||||||||    
T  833934 aatataacaaatataatctaaattcttatctttttgaatgacaccaacaatataaca 833878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 835688 - 835630
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaata 89  Q
    ||||||||| ||||||| || |||||||||| ||| |||||||| ||||||||||||||    
T  835688 taacaaatataatataaattattatattttttaataacaccaacgatataacattaata 835630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 14861840 - 14861898
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||| | |||| ||||| | ||||||||||||| |||||||||||||||||||||||    
T  14861840 aatatagctaatataatattaattcttatattttttaatgacaccaacaatataacatt 14861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 23085337 - 23085395
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||| | |||||||||||| ||||||||    
T  23085337 aatataacaaatataatataaattcttatttttttaactgacaccaacaaaataacatt 23085395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 4460574 - 4460506
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||| | |||||  |||||| ||||||||||||||| ||||| ||||| |||||||||||| ||||    
T  4460574 tgacacagacaatatggcaaatataatataatttcttatctttttgaatgataccaacaatatagcatt 4460506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 27598414 - 27598358
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||||||||| |||| || ||||||||||||| ||| | |||||||||||||||    
T  27598414 aatataacaaataaaataaaaattcttatattttttaataataccaacaatataaca 27598358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 11255408 - 11255345
Alignment:
Q  147 ctcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||| | ||||||  ||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  11255408 ctcacaccccaaaaaacacaagttacattccagaatgactaatataccttttaactaaaataaa 11255345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 17822176 - 17822235
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| || | || ||||||| ||||||||| ||||||||||||||| ||||    
T  17822176 aatataacaaatataacaaaaattcttatctttttcaataacaccaacaatataatatta 17822235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 27175242 - 27175183
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| || | || ||||||| ||||| ||| ||||||||||||||||||||    
T  27175242 aatataacaaatataacaaaaattcttatcttttttaataacaccaacaatataacatta 27175183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 29686204 - 29686267
Alignment:
Q  10 tttgcagtgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaa 73  Q
    |||||| |||||  || ||||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  29686204 tttgcaatgacatcaacaatataacaaatataatataaattcttatctttttgaatgacaccaa 29686267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 37516885 - 37516932
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaac 74  Q
    |||||| |||||| ||||||| ||||||||||||| ||||||||||||    
T  37516885 aatatatcaaatataatataaattcttatatttttgaatgacaccaac 37516932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 2344300 - 2344358
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||| ||||||||| || ||||||| ||||| ||| ||||||| |||||||||||    
T  2344300 aatataacgaatacaatagaaattcttatctttttgaattacaccaataatataacatt 2344358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 28727922 - 28727956
Alignment:
Q  51 cttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| |||||||||||||||||||||||||||||    
T  28727922 cttatgtttttcaatgacaccaacaatataacatt 28727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 33591284 - 33591346
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| | ||||||  ||||||||||||||||||||| |||| ||| ||||||| |||||||    
T  33591284 tcacacccaaaaaaaaacaagttacactccagaatgactaatacaccctttaactaaaataaa 33591346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 41863309 - 41863370
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||| | |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  41863309 aaaaaatataacaatt-caatataaattcttatcttttttaatgacaccaacaaaatagcatt 41863370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 1539369 - 1539316
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||||| ||||| ||||||||||||||| ||||| ||||| | ||||||||||    
T  1539369 aatataaaaaatataatataatttcttatctttttgaatgatatcaacaatata 1539316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 8835861 - 8835906
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||| |||||||| |||||||| ||||||| |||||||    
T  8835861 caagttacactctagaatgactaatataccctttaactaaaataaa 8835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 12095636 - 12095583
Alignment:
Q  33 acaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||| |||||||  ||||||  |||||| ||||||||||||||||||||||    
T  12095636 acaaatataatataaactcttattcttttcagtgacaccaacaatataacatta 12095583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 14725342 - 14725293
Alignment:
Q  36 aatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||| |||| || ||||||||||||||||| |||||| ||||||||||||    
T  14725342 aatataataaaaattcttatatttttcaataacaccagcaatataacatt 14725293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 31377557 - 31377602
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||| ||||||||| |||||||| ||||||| |||||||    
T  31377557 caagttacacttcagaatgactaatataccctttaactaaaataaa 31377602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 3945184 - 3945228
Alignment:
Q  41 aatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||||||    
T  3945184 aatataagttcttatattttttaatgacacctacaaaataacatt 3945228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 38237470 - 38237538
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||    
T  38237470 tgacacaaacaatataacaaatataatataaattcttatctttttcaatgacaccaacagtataacatt 38237538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 32358937 - 32358869
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  32358937 tgacacaaaaaatataccaaatataatataaattcttatctttttcaatgacaacaaaaatataacatt 32358869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 29285639 - 29285584
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  29285639 taacaaatataatataaattcttatgtttttcaataacaccaacaatataacatta 29285584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 35338427 - 35338368
Alignment:
Q  26 aaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||| ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  35338427 aaatataataaatataatataaattcttatcttttttaatgacaccaacaatataacatt 35338368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 8146114 - 8146065
Alignment:
Q  36 aatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||| |||||    
T  8146114 aatataatataatttcttatcttttttaatgacaccaacaatattacatt 8146065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 38167500 - 38167572
Alignment:
Q  137 acaaattctactcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| ||||||||| ||| |||||||||||||| || |||||||||||||||||   ||||||| |||||||    
T  38167500 acaaatactactcaca-actcaaaaatccaagttaaaccccagaatgaccaatatatgctttaactgaaataaa 38167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 5468154 - 5468095
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||| ||||| |||||||  |||||| ||||||||||||| ||| ||||||||||||    
T  5468154 aatataataaatataatataagatcttatctttttcaatgacatcaataatataacatta 5468095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 1292086 - 1292136
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| ||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  1292086 aaatataatataaattcttatcttttttaatgacaccaacaatatagcatt 1292136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 24650045 - 24649987
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||| ||| |||| ||||||||    
T  24650045 aatataacaaatataatataaattcttatctttttgaatgagaccgacaaaataacatt 24649987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 44410538 - 44410588
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||  |||||||    
T  44410538 aaatataatataaattcttatattttttaatgacaccaacaaagtaacatt 44410588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 4094294 - 4094347
Alignment:
Q  28 atataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    |||||||||||| ||||||| || | |||||||| |||||||||||||| ||||    
T  4094294 atataacaaatataatataaattatcatatttttgaatgacaccaacaacataa 4094347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 40186004 - 40186049
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||||||| || |||||||| ||||||| |||||||    
T  40186004 caagttacactccagaataactaatataccctttaactaaaataaa 40186049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 22711520 - 22711468
Alignment:
Q  24 aaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    |||||||||| ||||| ||||||| ||| ||| ||||| ||||||||||||||    
T  22711520 aaaaatataataaatataatataaattcatatttttttgaatgacaccaacaa 22711468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 44291885 - 44291841
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||    
T  44291885 aagttacactccagaataactaatataccttttaactaaaataaa 44291841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 20004771 - 20004833
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  20004771 aaaaaatataacaaatataatataaattcttatattttttaatgacaccaacaaaatagcatt 20004833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 47393614 - 47393564
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  47393614 aaatataatataatttcttatatttttgaatgacaccaacaatataacatt 47393564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 45637842 - 45637901
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| ||||||| |||||||||||| |||||| | ||||||||||||||||    
T  45637842 aatataacaaatataatataaattcttatattttccaatgatatcaacaatataacatta 45637901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 27746684 - 27746734
Alignment:
Q  36 aatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    |||| ||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  27746684 aatataatataaattcttatctttttcaatgacaccaataatataacatta 27746734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 47683518 - 47683472
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaa 73  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  47683518 aatataacaaatataatataaattcttatatttttgaatgacaccaa 47683472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 48458506 - 48458448
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||| || ||||||||||| ||||||||    
T  48458506 aatataacaaatataatataaattcttatttttttgaacgacaccaacaaaataacatt 48458448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 54055383 - 54055329
Alignment:
Q  22 caaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    |||||| ||||||||||| ||||||| ||||||||||||| || |||||||||||    
T  54055383 caaaaagtataacaaatataatataaattcttatatttttgaacgacaccaacaa 54055329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 4523875 - 4523939
Alignment:
Q  19 acacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||| ||||||||||||| || |||| || || | ||||||||||||| |||||||||||||    
T  4523875 acacaaacaatataacaaatataacataaatttttttctttttcaatgacatcaacaatataaca 4523939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31444947 - 31444991
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatattttt 61  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||    
T  31444947 tgacacaaacaatataacaaatataatataaattcttatattttt 31444991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 1237592 - 1237529
Alignment:
Q  18 gacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||| || ||||||  ||||| ||||||| ||||||| ||||| |||||||||||||||||||    
T  1237592 gacaccaacaatatagaaaatataatataaattcttatcttttttaatgacaccaacaatataa 1237529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 24916091 - 24916044
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaac 74  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||||||||    
T  24916091 aatataacaaatataatataatttcttttcttttttaatgacaccaac 24916044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 48171862 - 48171803
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| || | || ||||||||||||| ||| ||||||| ||||||||||||    
T  48171862 aatataacaaatataacaaaaattcttatattttttaattacaccaataatataacatta 48171803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 3930978 - 3931040
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| | ||||||  ||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  3930978 tcacaccccaaaaaaaacaaattacactccagaatgactaatataccctttaactaaaataaa 3931040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 51187444 - 51187474
Alignment:
Q  53 tatatttttcaatgacaccaacaatataaca 83  Q
    |||||||||||||||||||||||||||||||    
T  51187444 tatatttttcaatgacaccaacaatataaca 51187474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 10214326 - 10214379
Alignment:
Q  32 aacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||| |||| || ||||||||| ||| |||||||||||||| ||||||||    
T  10214326 aacaaatataatacaaattcttatatatttgaatgacaccaacaaaataacatt 10214379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 24744396 - 24744441
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||||||  |||||||| ||||||| |||||||    
T  24744396 caagttacactccagaatgattaatataccctttaactaaaataaa 24744441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 4608666 - 4608718
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgaca 69  Q
    |||||| || ||||||||||||| ||||||| ||||||| ||||| |||||||    
T  4608666 tgacaccaacaatataacaaatataatataaattcttatctttttgaatgaca 4608718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 26509612 - 26509648
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatattt 59  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  26509612 aaaaaatataacaaatataatataagttcttatattt 26509648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 28477051 - 28477103
Alignment:
Q  24 aaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    |||||||||||||||| ||||||| |||||||  |||| || |||||||||||    
T  28477051 aaaaatataacaaatataatataaattcttattattttgaaagacaccaacaa 28477103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 50377028 - 50377000
Alignment:
Q  58 ttttcaatgacaccaacaatataacatta 86  Q
    |||||||||||||||||||||||||||||    
T  50377028 ttttcaatgacaccaacaatataacatta 50377000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 32279608 - 32279669
Alignment:
Q  24 aaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  32279608 aaaaatataacaaatataatataaattcttatcttttttaatgacaccaacaaaataacatt 32279669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 8866864 - 8866922
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  8866864 aatataacaaatataatataaattcttatcttttttaatgacaccaacaataaaacatt 8866922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 32938917 - 32938875
Alignment:
Q  49 ttcttatatttttcaatgacaccaacaatataacattaatatt 91  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  32938917 ttcttatattttttaatgacaccaacaatataacattattatt 32938875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 33490432 - 33490388
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||    
T  33490432 aagttacactccagaatgactaatataccctttaactaaaataaa 33490388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 9155476 - 9155543
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    |||| |||||||||||| ||||||  | ||||| |||||||||||||||||||| | |||||| ||||    
T  9155476 aaaacatataacaaatataatatatatccttatttttttcaatgacaccaacaaaacaacattcatat 9155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 3533293 - 3533239
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||||| ||||| ||||| ||||||||| ||||| ||| |||||||||||||||    
T  3533293 aatataaaaaatataatatgatttcttattttttttaataacaccaacaatataa 3533239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 8479040 - 8478986
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||||||||||| |||| || ||||||||||||||| | ||| |||||||||||    
T  8479040 aatataacaaatataataaaaattcttatatttttcattaacatcaacaatataa 8478986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 22793683 - 22793745
Alignment:
Q  29 tataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatt 91  Q
    ||||| ||||| |||| || ||||||| ||||| ||| |||||||||||||||||||| ||||    
T  22793683 tataataaatataataaaaattcttatctttttaaataacaccaacaatataacattattatt 22793745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 8872564 - 8872613
Alignment:
Q  36 aatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||| ||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  8872564 aatataatataaattcttatcttttttaatgacaccaacaataaaacatt 8872613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 14356673 - 14356722
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||||||| ||||||| ||||||||||||||||| | || |||||||||    
T  14356673 taacaaatataatataaattcttatatttttcaataatacaaacaatata 14356722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 742223 - 742267
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||| | |||||||| |||||||||||||||| |||||||    
T  742223 aagttacaccctagaatgactaatataccatttaactaaaataaa 742267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 4119120 - 4119168
Alignment:
Q  30 ataacaaatacaatataatttcttatatttttcaatgacaccaacaata 78  Q
    |||||||||||||||||| |||| || ||||| |||||||| |||||||    
T  4119120 ataacaaatacaatataaattctaatcttttttaatgacacaaacaata 4119168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 30675540 - 30675599
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    ||||||||| |||||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  30675540 taacaaatataatataaactcttatattttttaataacaccaacaatataacattaatat 30675599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 11694206 - 11694268
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||||||| ||||||| || |||||||||| |||||||||||||| ||| ||||    
T  11694206 aaaaaatataacaaatataatataaatttttatatttttgaatgacaccaacaaaatagcatt 11694268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 23914649 - 23914591
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||||    
T  23914649 aatataacaaatataatataaattcttatctttttcaataacacaaacaatataacatt 23914591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 727812 - 727757
Alignment:
Q  25 aaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||||| ||||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  727812 aaaatatcacaaatacaatatcaattcttatctttttcaatgacatcaacaatata 727757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 11681632 - 11681682
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaa 73  Q
    ||||||||||||||||| ||||||| || |||||||||| |||||||||||    
T  11681632 aaaaaatataacaaatataatataaatttttatatttttgaatgacaccaa 11681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 35468797 - 35468739
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||| ||||| ||||||| ||||||||||||| | |||||||||||| ||||||||    
T  35468797 aatataataaatataatataaattcttatattttttattgacaccaacaaaataacatt 35468739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 352434 - 352378
Alignment:
Q  34 caaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    |||||| ||||||| | ||||| |||||||||  |||||||||||||||||||||||    
T  352434 caaatataatataaatccttatctttttcaataccaccaacaatataacattaatat 352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 2371423 - 2371467
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||    
T  2371423 aagttacactccagaatgactaatataccctttaactaaaataaa 2371467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28417029 - 28416977
Alignment:
Q  24 aaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||||||| || ||||||| ||||||| ||||| ||||||||||||||    
T  28417029 aaaaatataacaactataatataaattcttatctttttgaatgacaccaacaa 28416977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 21866523 - 21866598
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaattttttaatttaa 223  Q
    |||||| | ||||||  ||||||||||| ||||||||| |||||||| ||||||| |||||||  |||||| ||||    
T  21866523 tcacaccccaaaaaaaacaagttacacttcagaatgactaatataccctttaactaaaataaaaattttaaattaa 21866598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 23914845 - 23914790
Alignment:
Q  30 ataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||| | ||||||| |||||||||||||||||   |||||||||||||||||    
T  23914845 ataacaaacataatataaattcttatatttttcaatattaccaacaatataacatt 23914790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 744903 - 744961
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||| |||||| ||||||| || |||| ||||| ||| |||||||||||||||||||    
T  744903 aatatagcaaatataatataaatttttatctttttaaataacaccaacaatataacatt 744961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 12541533 - 12541471
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||| || ||||||| || |||||||||| ||||||| ||| || ||||||||    
T  12541533 aaaaaatataacaagtataatataaattattatattttttaatgacatcaataaaataacatt 12541471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 1071741 - 1071672
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    |||||| || ||||||||||||| ||||||| ||||||| |||||| || || |||||||| || |||||    
T  1071741 tgacactaacaatataacaaatataatataaattcttatttttttctataacgccaacaatttagcatta 1071672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 11090172 - 11090119
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||||| ||||| ||||||| ||||||| ||||| ||||| ||||||||    
T  11090172 aaaaaatataataaatataatataaattcttatctttttgaatgaaaccaacaa 11090119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 27591149 - 27591116
Alignment:
Q  58 ttttcaatgacaccaacaatataacattaatatt 91  Q
    |||||||| |||||||||||||||||||||||||    
T  27591149 ttttcaataacaccaacaatataacattaatatt 27591116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 27649274 - 27649229
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  27649274 aaatataatataaattcttatctttttcaatgacatcaacaatata 27649229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 39429256 - 39429301
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||||||| |||||||| ||||| | |||||||    
T  39429256 caagttacactccagaatgactaatataccctttaattaaaataaa 39429301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 19133945 - 19133881
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatt 91  Q
    ||||||||||||| ||||||| | ||||  ||||| |||  |||||||| |||||||||||||||    
T  19133945 aatataacaaatataatataaatccttactttttttaataccaccaacattataacattaatatt 19133881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 26966406 - 26966462
Alignment:
Q  34 caaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    |||||| ||||||| |||||||  |||| |||  |||||||||||||||||||||||    
T  26966406 caaatataatataaattcttatcatttttaatatcaccaacaatataacattaatat 26966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 32908729 - 32908701
Alignment:
Q  58 ttttcaatgacaccaacaatataacatta 86  Q
    |||||||||||||||||||||||||||||    
T  32908729 ttttcaatgacaccaacaatataacatta 32908701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 2653410 - 2653351
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| ||||||| |||||||||||| |||||| | ||||||||||||||||    
T  2653410 aatataacaaatataatataaattcttatattttccaatgatatcaacaatataacatta 2653351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 49840468 - 49840534
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    |||||| || ||||||||||||| ||||||  ||||||||||||| |||||||||||| ||||||||    
T  49840468 tgacaccaataatataacaaatataatatacattcttatattttttaatgacaccaacgatataaca 49840534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 10427414 - 10427353
Alignment:
Q  24 aaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  10427414 aaaaatataacaaatataatataagttcttatctttttaaatgacaccaacaaaatagcatt 10427353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 15881420 - 15881351
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||| | || |||||||| ||||| | |||||||||||||  |||||||||||||||||||||||    
T  15881420 tgacacaaatagtaaaacaaatataatattaattcttatatttttttatgacaccaacaatataacatta 15881351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 30658149 - 30658098
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||||||||    
T  30658149 aaatacaatataaattcttatattttcgaatgacagcaacaatataacatta 30658098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 35633045 - 35632991
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||||||| ||||||||    
T  35633045 taacaaatataatataaattcttatattttttaataacaccaacaaaataacatt 35632991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 40368116 - 40368078
Alignment:
Q  52 ttatatttttcaatgacaccaacaatataacattaatat 90  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40368116 ttatctttttcaatgacaccaacaatataacattaatat 40368078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 15910469 - 15910424
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||    
T  15910469 caagttacactccagaatgactaatataccctttaactaaaataaa 15910424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 27349034 - 27348981
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    |||| |||||||||||| ||||||| || |||||||||| ||||||||||||||    
T  27349034 aaaatatataacaaatataatataaattattatatttttgaatgacaccaacaa 27348981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 44717358 - 44717414
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||||||||| |||| || ||||||| ||||| ||| |||||||||||||||||    
T  44717358 aatataacaaataaaataaaaattcttatcttttttaataacaccaacaatataaca 44717414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Original strand, 12214091 - 12214122
Alignment:
Q  52 ttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||||||||||||||||||||||||||||    
T  12214091 ttatatttttcaatgacaccaacaatataaca 12214122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 12294522 - 12294461
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||||||| ||||||| ||||||| ||||  ||||||| |||||| ||||||||    
T  12294522 aaaaaatataacaaatataatataaattcttatcttttaaaatgaca-caacaaaataacatt 12294461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 21966320 - 21966258
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatat 79  Q
    |||||| || ||| ||||||||| ||||||| ||||||| ||||| ||||||||||| |||||    
T  21966320 tgacaccaacaatgtaacaaatataatataaattcttatctttttgaatgacaccaaaaatat 21966258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 27506618 - 27506568
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| ||||||| ||||||||||||| || ||||| ||||||||||||||    
T  27506618 aaatataatataagttcttatatttttgaacgacactaacaatataacatt 27506568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 42470383 - 42470453
Alignment:
Q  10 tttgcagtgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    |||||| || ||||||  |||| | ||||| ||||||| ||||||||||||| ||||||| ||||||||||    
T  42470383 tttgcaatgtcacaaacgatattataaatataatataaattcttatattttttaatgacaacaacaatata 42470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 42561646 - 42561700
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||| || |||||||||||||||  |||| ||||| |||||||||||||||||    
T  42561646 taacaagtataatataatttcttatgctttttaatgaaaccaacaatataacatt 42561700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 5257134 - 5257081
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||||| ||||| | ||||| ||||||| ||||| ||||||||||||||    
T  5257134 aaaaaatataataaatatactataaattcttatctttttgaatgacaccaacaa 5257081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9147815 - 9147762
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    |||||||| |||||||||||||||| || ||||  |||| ||||||||||||||    
T  9147815 aaaaaataaaacaaatacaatataacttattatcgttttgaatgacaccaacaa 9147762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 11067088 - 11067152
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatt 91  Q
    ||||||| ||||| || | || ||||||| ||||| ||| |||||||||||||||||||| ||||    
T  11067088 aatataaaaaatataacaaaaattcttatcttttttaataacaccaacaatataacattattatt 11067152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 13288683 - 13288619
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttt-tcaatgacaccaacaatataacattaatat 90  Q
    |||||| |||||| ||||||| ||||||| |||| | ||||||||||| |||||||||| |||||    
T  13288683 aatatagcaaatataatataaattcttattttttctaaatgacaccaagaatataacatcaatat 13288619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 14259202 - 14259170
Alignment:
Q  49 ttcttatatttttcaatgacaccaacaatataa 81  Q
    |||||||||||||||||||||||||||| ||||    
T  14259202 ttcttatatttttcaatgacaccaacaaaataa 14259170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 42560983 - 42561011
Alignment:
Q  58 ttttcaatgacaccaacaatataacatta 86  Q
    |||||||||||||||||||||||||||||    
T  42560983 ttttcaatgacaccaacaatataacatta 42561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 4438606 - 4438548
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||    
T  4438606 aatataacaaatataatataaattcttatcttttttaatgataccaacaatataacatt 4438548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 3501388 - 3501446
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| |||||||  |||| |||||||||||||| ||||||||    
T  3501388 aatataacaaatataatataagttcttatcattttgaatgacaccaacaaaataacatt 3501446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 31261300 - 31261349
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||| ||||||    
T  31261300 aatataacaaatataatataatttcttatcttttttaatgacatcaacaa 31261349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 13206116 - 13206180
Alignment:
Q  21 acaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||| ||||||||||||| | || || ||||||| ||||||| | |||||||||||||||||||    
T  13206116 acaaataatataacaaatatattaaaaattcttatctttttcattaacaccaacaatataacatt 13206180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 41372546 - 41372490
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataaca 83  Q
    ||||||||| ||| ||||||| ||||||| ||||| |||||| ||||||||||||||    
T  41372546 aatataacagatataatataaattcttattttttttaatgacgccaacaatataaca 41372490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 2442317 - 2442258
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| ||||||| || |||| ||||| ||| ||| ||||||||||||||||    
T  2442317 aatataacaaatataatataaatttttatcttttttaataacatcaacaatataacatta 2442258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 15920134 - 15920076
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| || ||||||| ||||| ||| ||||||||||||||||||||    
T  15920134 aatataacaaatataataaaaattcttatcttttt-aataacaccaacaatataacatta 15920076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 1103861 - 1103927
Alignment:
Q  144 ctactcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||  | ||||||  ||||||||||| ||||||||| |||||||| ||||||| |||||||    
T  1103861 ctactcacatcccaaaaaacacaagttacacttcagaatgactaatataccctttaactgaaataaa 1103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 1351753 - 1351699
Alignment:
Q  23 aaaaaatataacaaatacaatat-aatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||||||||||| ||||| |||| ||||||||||| ||||||||| ||||    
T  1351753 aaaaaatataacaaatataatataaattccttatatttttgaatgacaccgacaa 1351699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 3541257 - 3541199
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||| ||||||||||| ||| || |||||||| ||||| |||||||||||||| ||||    
T  3541257 aaaaagtataacaaatataatttattttcttatctttttgaatgacaccaacaaaataa 3541199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6629235 - 6629168
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatt----tcttatatttttcaatgacaccaacaatata 80  Q
    |||||| || ||||||||||||| |||||||||    || ||||||||| ||||||||||||||||||    
T  6629235 tgacaccaacaatataacaaatataatataattaaattcctatattttttaatgacaccaacaatata 6629168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 11578973 - 11579003
Alignment:
Q  53 tatatttttcaatgacaccaacaatataaca 83  Q
    |||||||||||||||||||||||||||||||    
T  11578973 tatatttttcaatgacaccaacaatataaca 11579003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 18575760 - 18575706
Alignment:
Q  131 tttaagacaaattctactcacacactaaaaaatccaagttacactccagaatgac 185  Q
    |||| |||| || |||||||||| | |||||||||||||||||| ||||||||||    
T  18575760 tttatgacagatactactcacaccccaaaaaatccaagttacacaccagaatgac 18575706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 34151197 - 34151136
Alignment:
Q  14 cagtgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaa 76  Q
    ||||||||| || ||||||| ||||| ||||||| ||||||| ||||| ||||||||||||||    
T  34151197 cagtgacaccaacaatataa-aaatataatataaattcttatctttttaaatgacaccaacaa 34151136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16338071 - 16338018
Alignment:
Q  32 aacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||| ||||    
T  16338071 aacaaatataatataattgtttatctttttaaatgacaccaacaatatatcatt 16338018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 23038554 - 23038497
Alignment:
Q  33 acaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    ||||||| ||||||| ||||||  ||||| ||| ||||||||||||||| ||||||||    
T  23038554 acaaatataatataaattcttaccttttttaataacaccaacaatataaaattaatat 23038497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 4437486 - 4437538
Alignment:
Q  26 aaatataacaaatacaatataatttcttatatttttcaatgacaccaacaata 78  Q
    ||||||| |||||| ||||||| ||||||||||||| ||||| ||||| ||||    
T  4437486 aaatatagcaaatataatataaattcttatattttttaatgataccaataata 4437538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 11876424 - 11876484
Alignment:
Q  27 aatataacaaatacaatataat-ttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| ||  ||||||||||||| ||| ||| ||||||||||||||||    
T  11876424 aatataacaaatataataaaaaattcttatattttttaatcacaacaacaatataacatta 11876484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 11891431 - 11891491
Alignment:
Q  27 aatataacaaatacaatataat-ttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| ||  ||||||||||||| ||| ||| ||||||||||||||||    
T  11891431 aatataacaaatataataaaaaattcttatattttttaatcacaacaacaatataacatta 11891491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 20188304 - 20188260
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||    
T  20188304 aagttacactccagaataactaatataccttttaactaaaataaa 20188260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 20207373 - 20207329
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||    
T  20207373 aagttacactccagaataactaatataccttttaactaaaataaa 20207329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 31098032 - 31097988
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||||||||| |||||| | ||||||| |||||||    
T  31098032 aagttacactccagaatgactaatatatcctttaactaaaataaa 31097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 2594555 - 2594493
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||||||| ||||||| ||||||| ||||| |||||||||| ||| ||||||||    
T  2594555 aaaaaatataacaaatataatataaattcttatctttttgaatgacaccagcaaaataacatt 2594493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 13867302 - 13867235
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||| || ||||||||||||| ||||||| |||||||| |||| ||||||||||| |||||||||||    
T  13867302 tgacacgaacaatataacaaatataatataaattcttata-ttttgaatgacaccaataatataacatt 13867235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 17583282 - 17583223
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| || ||||||| ||||| ||| ||||||||||||||||||||    
T  17583282 aatataacaaatataataaaaattcttatcttttttaataacaccaacaatataacatta 17583223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 2446716 - 2446654
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| | ||||||  ||||||||||||||||||||| |||||||| ||||||| |||||||    
T  2446716 tcacaccccaaaaaaaacaagttacactccagaatgactaatataccctttaactaaaataaa 2446654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 5272847 - 5272909
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| |||||| |  ||||||||||||||||||||| |||||||| ||||||| |||||||    
T  5272847 tcacaccctaaaagaaacaagttacactccagaatgactaatataccctttaactaaaataaa 5272909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 46529283 - 46529238
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||    
T  46529283 caagttacactccagaatgactaatataccctttaactaaaataaa 46529238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 37681416 - 37681357
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    ||||||||| ||||||| | ||||| ||||| |||  |||||||||||||||||||||||    
T  37681416 taacaaatataatataaatccttatcttttttaataccaccaacaatataacattaatat 37681357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 66029 - 65971
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||||||||||||||| ||||| | || |||| ||||| |||||||||||||| ||||    
T  66029 aaaaaatataacaaataaaatatgaatttttatctttttgaatgacaccaacaaaataa 65971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 19578748 - 19578690
Alignment:
Q  33 acaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatatt 91  Q
    ||||||| |||| ||  |||||||||||| ||| |||||||||||||||||||| ||||    
T  19578748 acaaatataataaaaactcttatattttttaataacaccaacaatataacattattatt 19578690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 21594488 - 21594546
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||||||||||||||| ||||||| |||| || ||||| | |||||||||||| ||||    
T  21594488 aaaaaatataacaaatataatataaattctcatctttttgagtgacaccaacaaaataa 21594546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 47409675 - 47409613
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||||| || ||||||| ||||||| |||||  |||||||| |||| ||||||||    
T  47409675 aaaaaatataacaagtataatataaattcttatctttttggatgacaccgacaaaataacatt 47409613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 51103479 - 51103422
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    ||||||||||||| ||||||| |||||||||||||  || |||||||||| ||||||||    
T  51103479 aatataacaaatataatataagttcttatattttt-tataacaccaacaaaataacatt 51103422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 35963859 - 35963807
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||||||||||  ||||||||| |||| |||||| ||||||||||||||||||    
T  35963859 aatataacaaatgtaatataatt-cttaaattttttaatgacaccaacaatata 35963807  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 36643583 - 36643640
Alignment:
Q  28 atataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatt 85  Q
    |||||||||||| ||||||| |||||||  |||| ||||| |||||||| ||||||||    
T  36643583 atataacaaatataatataaattcttatcgttttgaatgataccaacaaaataacatt 36643640  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 37125936 - 37125981
Alignment:
Q  165 caagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||| |||||| |||||||| ||||||| |||||||    
T  37125936 caagttacactccaaaatgactaatataccctttaactaaaataaa 37125981  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 55091620 - 55091552
Alignment:
Q  17 tgacacaaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||| ||||||| ||||| | |||||||| |||| ||||| ||||||  ||||||||||||||||    
T  55091620 tgacacaaacaatataataaatatattataattttttattttttt-aatgacgtcaacaatataacatta 55091552  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8827692 - 8827736
Alignment:
Q  166 aagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||||||||||||||||| |||||||| ||||| | |||||||    
T  8827692 aagttacactccagaatgactaatataccctttaattaaaataaa 8827736  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 35512546 - 35512614
Alignment:
Q  134 aagacaaattctactcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaact 202  Q
    |||||| || |||||||||| | |||||| ||||||||||| ||| |||||| |||||| | |||||||    
T  35512546 aagacatatactactcacactccaaaaaacccaagttacaccccataatgactaatatatcctttaact 35512614  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 48240070 - 48240026
Alignment:
Q  35 aaatacaatataatttcttatatttttcaatgacaccaacaatat 79  Q
    ||||| ||||| |||||||||||||||||||  ||||||||||||    
T  48240070 aaatataatatgatttcttatatttttcaatagcaccaacaatat 48240026  T

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Target: scaffold1777 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 648 - 595
Alignment:
Q  28 atataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  648 atataacaaatataatataaattcttatatttttcaataataccaacaatataa 595  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 65599 - 65541
Alignment:
Q  23 aaaaaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataa 81  Q
    ||||||||||||||||| ||||||| ||||||| ||||| ||||| |||||||| ||||    
T  65599 aaaaaatataacaaatataatataaattcttatctttttgaatgataccaacaaaataa 65541  T

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Target: scaffold1017 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 2039 - 2098
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 86  Q
    ||||||||||||| |||| || ||||||| ||||| ||| |||| |||||||||||||||    
T  2039 aatataacaaatataataaaaattcttatcttttttaataacacaaacaatataacatta 2098  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 101108 - 101167
Alignment:
Q  31 taacaaatacaatataatttcttatatttttcaatgacaccaacaatataacattaatat 90  Q
    ||||||||| ||||||| ||| ||| ||||| ||||  ||||||||||||||||||||||    
T  101108 taacaaatataatataaattcatatcttttttaatgtgaccaacaatataacattaatat 101167  T

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Target: scaffold1360 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 358 - 420
Alignment:
Q  148 tcacacactaaaaaatccaagttacactccagaatgaccaatataccatttaacttaaataaa 210  Q
    |||||| | ||||||  ||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  358 tcacaccccaaaaaaaacaaattacactccagaatgactaatataccctttaactaaaataaa 420  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 36864 - 36811
Alignment:
Q  27 aatataacaaatacaatataatttcttatatttttcaatgacaccaacaatata 80  Q
    ||||||||||||| |||| || ||||||| ||||| ||| ||||||||||||||    
T  36864 aatataacaaatataataaaaattcttatcttttttaataacaccaacaatata 36811  T

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