View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11976_high_28 (Length: 239)
Name: NF11976_high_28
Description: NF11976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11976_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28397938 - 28398160
Alignment:
| Q |
1 |
gaacacctagttggcctgatggcgtaggtttgctatttattctgactttaaccgggggcccttactggtggacggtgggattactccaccagattagtcg |
100 |
Q |
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| T |
28397938 |
gaacacctagttggcctgatggtgtaggtttgctatttgttctgactttaactgggggcccttactggtggacggtgggattactccaccagattagtcg |
28398037 |
T |
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| Q |
101 |
gtatttggtctagataccgaatttccaaacaaattaaaagagggacaaacttcacattttagtagagtcaaagatctttataaaatactcataatctctt |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28398038 |
gtatttggtctagatactgaatttccaaacaaattaaaagagggacaaacttcacattttagtagagtcaaagatctttataaaatactcataatctctt |
28398137 |
T |
|
| Q |
201 |
gcacttattggagagcaccctac |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
28398138 |
gcacttattggagagcaccctac |
28398160 |
T |
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