View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11976_high_6 (Length: 660)

Name: NF11976_high_6
Description: NF11976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11976_high_6
NF11976_high_6
[»] chr2 (30 HSPs)
chr2 (22-605)||(13561280-13561862)
chr2 (22-557)||(14203860-14204404)
chr2 (606-660)||(4723567-4723621)
chr2 (606-660)||(31635826-31635880)
chr2 (606-660)||(44484672-44484726)
chr2 (606-659)||(40326128-40326181)
chr2 (605-657)||(9202535-9202587)
chr2 (608-660)||(19631389-19631441)
chr2 (608-660)||(19828290-19828342)
chr2 (604-658)||(12070848-12070903)
chr2 (606-660)||(34134786-34134841)
chr2 (606-660)||(1876303-1876357)
chr2 (606-660)||(1889148-1889202)
chr2 (606-660)||(6851675-6851729)
chr2 (606-660)||(7498007-7498061)
chr2 (606-660)||(11229337-11229391)
chr2 (606-660)||(11442673-11442727)
chr2 (606-660)||(13466091-13466145)
chr2 (606-660)||(14797666-14797720)
chr2 (606-660)||(15283266-15283320)
chr2 (603-657)||(19052736-19052790)
chr2 (606-660)||(23345005-23345059)
chr2 (606-660)||(32688560-32688614)
chr2 (606-660)||(33857218-33857272)
chr2 (606-660)||(36587484-36587538)
chr2 (606-660)||(42141610-42141664)
chr2 (606-659)||(5455470-5455523)
chr2 (604-660)||(33030118-33030175)
chr2 (606-658)||(6365187-6365239)
chr2 (606-658)||(36909861-36909913)
[»] scaffold0204 (1 HSPs)
scaffold0204 (606-660)||(27340-27394)
[»] chr4 (53 HSPs)
chr4 (606-660)||(49768885-49768939)
chr4 (606-657)||(44250246-44250297)
chr4 (606-660)||(38792905-38792959)
chr4 (606-660)||(46844257-46844311)
chr4 (606-660)||(47540136-47540190)
chr4 (606-660)||(37514147-37514202)
chr4 (606-660)||(47288083-47288138)
chr4 (606-660)||(149303-149357)
chr4 (606-660)||(1562552-1562606)
chr4 (606-660)||(19910813-19910867)
chr4 (606-660)||(40721980-40722034)
chr4 (608-658)||(46363997-46364047)
chr4 (606-660)||(47998595-47998649)
chr4 (606-660)||(48722070-48722124)
chr4 (606-660)||(49424836-49424890)
chr4 (606-658)||(44170637-44170689)
chr4 (608-660)||(47519736-47519788)
chr4 (606-660)||(4915688-4915743)
chr4 (606-657)||(51389317-51389368)
chr4 (606-660)||(4514281-4514335)
chr4 (606-660)||(9472529-9472583)
chr4 (606-660)||(10994168-10994222)
chr4 (606-660)||(12241059-12241113)
chr4 (606-660)||(12638826-12638880)
chr4 (606-660)||(24772672-24772726)
chr4 (606-660)||(29513712-29513766)
chr4 (606-660)||(31147232-31147286)
chr4 (606-659)||(31469005-31469059)
chr4 (606-660)||(33820352-33820406)
chr4 (606-660)||(39010153-39010207)
chr4 (606-660)||(39881046-39881100)
chr4 (606-660)||(40335790-40335844)
chr4 (606-660)||(40409182-40409236)
chr4 (606-660)||(40755922-40755976)
chr4 (603-657)||(43759170-43759224)
chr4 (606-660)||(44165910-44165964)
chr4 (606-660)||(45779307-45779361)
chr4 (606-660)||(46566930-46566984)
chr4 (606-660)||(51224854-51224908)
chr4 (606-660)||(52392241-52392295)
chr4 (606-660)||(53357093-53357147)
chr4 (606-660)||(53662444-53662498)
chr4 (606-660)||(55595950-55596004)
chr4 (606-660)||(55996423-55996477)
chr4 (606-660)||(56025257-56025311)
chr4 (606-659)||(18568832-18568885)
chr4 (606-658)||(169520-169572)
chr4 (606-658)||(4896518-4896570)
chr4 (620-660)||(6239395-6239435)
chr4 (608-660)||(12694444-12694496)
chr4 (608-660)||(38160789-38160841)
chr4 (605-653)||(45548807-45548855)
chr4 (608-660)||(48743713-48743765)
[»] chr5 (28 HSPs)
chr5 (606-659)||(39191851-39191904)
chr5 (606-660)||(12661963-12662017)
chr5 (606-660)||(20591490-20591544)
chr5 (606-658)||(36416080-36416132)
chr5 (606-657)||(38500944-38500995)
chr5 (606-660)||(2456027-2456081)
chr5 (606-659)||(6758807-6758861)
chr5 (606-660)||(26660427-26660481)
chr5 (606-660)||(26932019-26932073)
chr5 (606-660)||(31708371-31708425)
chr5 (606-658)||(2050928-2050980)
chr5 (605-660)||(4292782-4292837)
chr5 (606-660)||(18695319-18695374)
chr5 (606-660)||(11666180-11666234)
chr5 (606-660)||(14323984-14324038)
chr5 (606-660)||(19271860-19271914)
chr5 (606-660)||(22920508-22920562)
chr5 (606-660)||(29807018-29807072)
chr5 (606-660)||(34381013-34381067)
chr5 (606-660)||(39595273-39595327)
chr5 (606-660)||(41192588-41192642)
chr5 (608-657)||(3141498-3141547)
chr5 (604-649)||(24463258-24463303)
chr5 (606-659)||(42699058-42699111)
chr5 (606-657)||(4088444-4088496)
chr5 (608-660)||(15291021-15291073)
chr5 (608-660)||(18449264-18449316)
chr5 (606-657)||(38293377-38293429)
[»] chr8 (30 HSPs)
chr8 (606-660)||(27630898-27630952)
chr8 (606-660)||(31806300-31806354)
chr8 (606-657)||(20473780-20473831)
chr8 (606-660)||(11114685-11114739)
chr8 (606-660)||(11223875-11223929)
chr8 (606-660)||(11879506-11879560)
chr8 (606-660)||(11896922-11896976)
chr8 (606-660)||(32174955-32175009)
chr8 (606-660)||(35818938-35818992)
chr8 (606-660)||(35937528-35937582)
chr8 (606-659)||(38504171-38504224)
chr8 (608-660)||(31666006-31666058)
chr8 (606-657)||(1332487-1332538)
chr8 (606-660)||(10644817-10644872)
chr8 (606-660)||(10653799-10653851)
chr8 (606-657)||(43873710-43873761)
chr8 (606-660)||(3650114-3650168)
chr8 (606-660)||(10344325-10344379)
chr8 (606-660)||(12659053-12659107)
chr8 (606-660)||(14548839-14548893)
chr8 (606-660)||(20995074-20995128)
chr8 (606-660)||(24116041-24116095)
chr8 (606-660)||(29509267-29509321)
chr8 (606-660)||(34970208-34970262)
chr8 (606-660)||(34996376-34996430)
chr8 (606-660)||(45101397-45101451)
chr8 (606-659)||(7814609-7814662)
chr8 (608-660)||(6105452-6105504)
chr8 (606-658)||(39153700-39153752)
chr8 (608-660)||(42130999-42131051)
[»] chr7 (26 HSPs)
chr7 (606-660)||(2790178-2790232)
chr7 (606-660)||(35822990-35823045)
chr7 (606-660)||(36352602-36352657)
chr7 (606-660)||(46829480-46829535)
chr7 (606-660)||(19426581-19426635)
chr7 (606-660)||(28081798-28081852)
chr7 (606-660)||(33212043-33212097)
chr7 (606-660)||(40842406-40842460)
chr7 (610-660)||(41815150-41815200)
chr7 (607-660)||(41890529-41890582)
chr7 (606-660)||(37899228-37899283)
chr7 (606-660)||(42584803-42584858)
chr7 (606-660)||(9055268-9055322)
chr7 (606-660)||(23761060-23761114)
chr7 (606-660)||(24267663-24267717)
chr7 (606-660)||(36920805-36920858)
chr7 (606-660)||(40077255-40077309)
chr7 (606-656)||(49128724-49128774)
chr7 (608-660)||(6269369-6269422)
chr7 (606-651)||(25940657-25940702)
chr7 (606-659)||(30941179-30941232)
chr7 (606-655)||(41966333-41966382)
chr7 (606-659)||(42276092-42276145)
chr7 (606-651)||(42663085-42663130)
chr7 (606-650)||(32919006-32919050)
chr7 (606-658)||(48866948-48867000)
[»] chr1 (34 HSPs)
chr1 (606-660)||(12489597-12489651)
chr1 (606-660)||(24611845-24611899)
chr1 (606-660)||(24910150-24910204)
chr1 (606-660)||(51193147-51193201)
chr1 (604-660)||(18959003-18959059)
chr1 (606-660)||(52437495-52437550)
chr1 (606-660)||(18541067-18541121)
chr1 (606-660)||(29632435-29632489)
chr1 (606-660)||(30530590-30530644)
chr1 (606-660)||(40610230-40610284)
chr1 (606-660)||(49596236-49596290)
chr1 (606-660)||(49621364-49621418)
chr1 (604-660)||(1724248-1724303)
chr1 (606-654)||(39669807-39669855)
chr1 (606-657)||(9445109-9445160)
chr1 (601-660)||(44641919-44641978)
chr1 (606-657)||(46003469-46003520)
chr1 (608-659)||(49906492-49906543)
chr1 (606-660)||(1156480-1156534)
chr1 (606-660)||(3919301-3919355)
chr1 (606-660)||(7203860-7203914)
chr1 (606-660)||(11068426-11068480)
chr1 (606-660)||(11097900-11097954)
chr1 (606-659)||(21433417-21433471)
chr1 (606-660)||(26501296-26501350)
chr1 (606-660)||(27810263-27810317)
chr1 (606-660)||(30505352-30505406)
chr1 (606-660)||(36231722-36231776)
chr1 (606-660)||(36690588-36690642)
chr1 (606-660)||(36706689-36706743)
chr1 (606-660)||(43196105-43196159)
chr1 (606-660)||(44112455-44112509)
chr1 (606-660)||(50226895-50226949)
chr1 (606-659)||(46947982-46948035)
[»] chr6 (16 HSPs)
chr6 (607-660)||(29643433-29643486)
chr6 (606-660)||(11785356-11785410)
chr6 (606-660)||(28965856-28965910)
chr6 (606-658)||(8778890-8778942)
chr6 (606-660)||(3821379-3821433)
chr6 (606-660)||(9954549-9954603)
chr6 (606-660)||(16743282-16743336)
chr6 (606-660)||(17835613-17835667)
chr6 (606-660)||(18792448-18792502)
chr6 (606-660)||(19789092-19789146)
chr6 (606-660)||(25554246-25554300)
chr6 (606-660)||(25924880-25924934)
chr6 (606-659)||(22492044-22492097)
chr6 (608-660)||(14094914-14094966)
chr6 (608-660)||(21506339-21506391)
chr6 (608-660)||(34490350-34490402)
[»] chr3 (32 HSPs)
chr3 (606-660)||(108432-108486)
chr3 (606-660)||(11335318-11335372)
chr3 (606-660)||(35376567-35376621)
chr3 (606-660)||(39604262-39604316)
chr3 (603-660)||(41369595-41369652)
chr3 (606-658)||(5398919-5398971)
chr3 (606-660)||(29573371-29573426)
chr3 (606-657)||(47849673-47849724)
chr3 (606-660)||(48352997-48353052)
chr3 (606-660)||(52714734-52714789)
chr3 (606-660)||(462417-462471)
chr3 (606-660)||(2482690-2482744)
chr3 (606-660)||(20215949-20216003)
chr3 (606-660)||(30805619-30805673)
chr3 (606-660)||(37215247-37215301)
chr3 (606-660)||(37754448-37754502)
chr3 (606-660)||(40159854-40159908)
chr3 (606-660)||(41877689-41877743)
chr3 (606-660)||(47056542-47056596)
chr3 (606-660)||(48179069-48179123)
chr3 (606-660)||(49761202-49761256)
chr3 (606-660)||(51032640-51032694)
chr3 (606-660)||(53718050-53718103)
chr3 (606-660)||(53932407-53932461)
chr3 (606-659)||(12792639-12792692)
chr3 (608-660)||(26452738-26452791)
chr3 (607-660)||(47988501-47988554)
chr3 (607-660)||(47997788-47997841)
chr3 (607-660)||(48007075-48007128)
chr3 (606-658)||(34271508-34271560)
chr3 (606-658)||(46003706-46003758)
chr3 (608-660)||(48649583-48649635)
[»] scaffold0049 (1 HSPs)
scaffold0049 (606-658)||(72187-72239)
[»] scaffold0001 (1 HSPs)
scaffold0001 (604-659)||(404747-404802)
[»] scaffold0511 (1 HSPs)
scaffold0511 (606-660)||(11639-11693)
[»] scaffold0087 (1 HSPs)
scaffold0087 (606-660)||(27079-27133)
[»] scaffold0020 (1 HSPs)
scaffold0020 (606-660)||(155907-155961)
[»] scaffold0014 (1 HSPs)
scaffold0014 (606-660)||(199267-199321)
[»] scaffold0002 (1 HSPs)
scaffold0002 (606-660)||(6428-6482)
[»] scaffold0687 (1 HSPs)
scaffold0687 (606-659)||(7061-7114)
[»] scaffold0009 (1 HSPs)
scaffold0009 (606-658)||(190900-190952)


Alignment Details
Target: chr2 (Bit Score: 453; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 22 - 605
Target Start/End: Original strand, 13561280 - 13561862
Alignment:
Q  22 ctccatctcttcaagtcaaagaaggagaggcctttggttagtgtaaactatcaaaatagattgataaattgaggcttaacactgttatatattttatgca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13561280 ctccatctcttcaagtcaaagaaggagaggcctttggttagtgtaaactatcaaaatagattggtaaattgaggcttaacactgttatatattttatgca 13561379  T
Q  122 aaatcagtagtggatagctttaataatttatgtttggacttgtctatctatggtttcattatttatgttcaaactcgttagttgaattctctagaaggaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  13561380 aaatcagtagtggatagctttaataatttatgtttggacttgtctatctatggtttcatcatttatgttcaagctcgttagttg-attctctagaaggaa 13561478  T
Q  222 ggtcaataaggtagcccgttacatgaaatatttatttagggacgattatatatacgactaatcctccagtaattgatttgttgtcggattgtattgctac 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13561479 ggtcaataaggtagcccgttacatg-aatatttatttagggacgattatatatacgattaatcctccagtaattgatttgttgtcggattgtattgctac 13561577  T
Q  322 tgannnnnnnaagcaaccaaagtcaaaatatatttaaaaaatcctcatcaaacataaggtgtgtctaataggaataacaacaaagtatcaaatacaaaat 421  Q
    |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13561578 tgatttttttaagcaaccaaagtcaaaatatatttaaaaaatcctcatcaaacataaggtgtgtctaacaggaataagaacaaagtatcaaatacaaaat 13561677  T
Q  422 aaaattggccaaaaaccactaatacaagttac-aaataatatatccaacctagattgacatgttaaattctatcgagcacttatatgaaacatgttgtaa 520  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13561678 aaaactggccaaaaaccactgatacaagttacaaaataatatatccaacctagattgacatgttaaattctatcgagcaattatatgaaacatgttgtaa 13561777  T
Q  521 gaaaatagcactaatataaaatatatgtaatttgcatnnnnnnnnnnnnngtagtggatatttaagtctcaccatatacgtctaa 605  Q
    ||||||||||||||||||||||||||||||| |||||             |||||||| ||||||||||||||||||| ||||||    
T  13561778 gaaaatagcactaatataaaatatatgtaatctgcataaaaataaaaaaagtagtggacatttaagtctcaccatatatgtctaa 13561862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 22 - 557
Target Start/End: Complemental strand, 14204404 - 14203860
Alignment:
Q  22 ctccatctcttcaagtcaaagaaggagaggcctttggttagtgtaaactatcaaaatagattgataaattgaggcttaacactgttatatattttatgca 121  Q
    ||||||||||||||||||| || |||||| ||||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||||||  ||||||||    
T  14204404 ctccatctcttcaagtcaaggatggagagacctttggttagagtaaactatcaaaacagattggtgaattgaggcttaacaatgttatat--tttatgca 14204307  T
Q  122 aaatcagtagtggatagctttaataatttatgtttggacttgtctatctatggtttcattatttatgttcaaactcgttagttgaattctctagaaggaa 221  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  14204306 aaattagtggtggatagctttaataatttatgtttggatttgtctatctatggtttcatcatttatgttcaaacttgttagttgaattctctagaaggaa 14204207  T
Q  222 ggtcaataaggtagcccgttacatgaaatatttatttagggacgattatatatacgactaatcctccagtaattgatttgttgtcggattgtattgctac 321  Q
    || |||||||||||||||||| ||| | |||||||||||||||| ||||||||| || |||||||   ||||||||||||||||| ||||||||||||||    
T  14204206 ggccaataaggtagcccgttaaatg-agtatttatttagggacggttatatatatgattaatccttgggtaattgatttgttgtctgattgtattgctac 14204108  T
Q  322 tgannnnnnnaagcaaccaaagtcaaaatata---tttaaaaaatcctcatcaaacataaggtgtgtctaataggaataacaacaaagtatcaaatacaa 418  Q
    |||       |||||||||||| |||||||||   || |||||||||| |||||| |||||||||||||||  |||| || |||||||||||||||||||    
T  14204107 tgatttttgtaagcaaccaaagacaaaatatatatttaaaaaaatccttatcaaatataaggtgtgtctaaccggaagaagaacaaagtatcaaatacaa 14204008  T
Q  419 aataaaattggccaaaaaccactaatacaagttacaaa-taatatatccaaccta--------gattgacatgttaaattctatcgagcacttatatgaa 509  Q
    ||||||| ||||||||||||| |||||||||||||||| ||  ||||||||| ||        |||||||  ||||||||||||||||||||||||| ||    
T  14204007 aataaaactggccaaaaaccaataatacaagttacaaattagcatatccaacttagattgagtgattgacgggttaaattctatcgagcacttatataaa 14203908  T
Q  510 acatgttgtaagaaaatagcactaatataaaatatatgtaatttgcat 557  Q
    | |||||  |||||||||| ||  |||||||||||||||||| |||||    
T  14203907 atatgttaaaagaaaatagaacctatataaaatatatgtaatctgcat 14203860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 4723567 - 4723621
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||| ||||||| |||||| ||||| |||||||||||||||    
T  4723567 agaaatgatatatgtacaaccattttttaacaacttttttacaactttctctctc 4723621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 31635880 - 31635826
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||    
T  31635880 agaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctc 31635826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 44484726 - 44484672
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||||||||  |||||||||||||||    
T  44484726 agaaatgatatttgtacaaccattttgtaacaatttttgtacaactttctctctc 44484672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 40326128 - 40326181
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| |||||| |||| |||| ||||||||||||||| |||||||||    
T  40326128 agaaatgatatttatacaaccatgttgtcacaattttttgacaattttctctct 40326181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 657
Target Start/End: Complemental strand, 9202587 - 9202535
Alignment:
Q  605 aagaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    |||||||||||| | |||| ||||||| | |||||||||||||||||||||||    
T  9202587 aagaaatgatatttctacaaccattttatgacaattttttgacaactttctct 9202535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 19631389 - 19631441
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| | |||||||||||||||||||||||| |||||||||    
T  19631389 aaatgatatttgtacaactattttgtaacaattttttgacaacattctctctc 19631441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 19828290 - 19828342
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| | |||||||||||||||||||||||| |||||||||    
T  19828290 aaatgatatttgtacaactattttgtaacaattttttgacaacattctctctc 19828342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 658
Target Start/End: Original strand, 12070848 - 12070903
Alignment:
Q  604 aaagaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctc 658  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||||||    
T  12070848 aaagaaatgatatatgtacaatcattttctaacaatttttgtgacaactttctctc 12070903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 34134841 - 34134786
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||||    
T  34134841 agaaatgatatttttacaaccattttgtaacaacttttctgacaactttctctctc 34134786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 1876357 - 1876303
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||| | ||||| | |||||||||| |||||||||||||||    
T  1876357 agaaatgatatttatacaactattttttcacaatttttttacaactttctctctc 1876303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 1889148 - 1889202
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  1889148 agaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctc 1889202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 6851729 - 6851675
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||| ||||||  |||| |||||||||||||||||||||    
T  6851729 agaaatgatatttgtacatctattttgctacaactttttgacaactttctctctc 6851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 7498061 - 7498007
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| | |||| |||||||||||||||||||||    
T  7498061 agaaatgatatttgtacaaccattttattacaactttttgacaactttctctctc 7498007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11229391 - 11229337
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||| ||||| |||| || ||||||||||||||||||    
T  11229391 agaaatgatatttgtacatccactttgtgacaacttcttgacaactttctctctc 11229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 11442673 - 11442727
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||  | ||||||||||||||||||||||||||    
T  11442673 agaaatgatatttgtacaaccatttcattacaattttttgacaactttctctctc 11442727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 13466145 - 13466091
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||||||||| |||||||||||||||    
T  13466145 agaaatgatatttgtacaaccaatttctaacaattttttaacaactttctctctc 13466091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 14797720 - 14797666
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  14797720 agaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctc 14797666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 15283320 - 15283266
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| ||||||||| ||||||||||||||||    
T  15283320 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctc 15283266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 657
Target Start/End: Complemental strand, 19052790 - 19052736
Alignment:
Q  603 taaagaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||| || |||||||    
T  19052790 taaagagatgatatttatacaaccactttgtaacaattttttgataattttctct 19052736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 23345059 - 23345005
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||| |||||| |||||| ||||||||||| |||||||||    
T  23345059 agaaatgatatttgtacattcattttataacaactttttgacaaccttctctctc 23345005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 32688614 - 32688560
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  32688614 agaaatgatatttgtacaaccactttctgacaattttttgacaactttctctctc 32688560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 33857218 - 33857272
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||  | |||| ||||||||||||||||||||||||||||    
T  33857218 agaaatgatatttgtacaatctttttctaacaattttttgacaactttctctctc 33857272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 36587538 - 36587484
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |  ||| ||||||| | ||||||||||||||||||||||||||    
T  36587538 agaaatgatatttgaacaaccattttttgacaattttttgacaactttctctctc 36587484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 42141664 - 42141610
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||| ||||||| | |||| |||| ||||||||||||||||    
T  42141664 agaaatgatatatgtacaaccattttttcacaacttttggacaactttctctctc 42141610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 5455523 - 5455470
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||||||| ||||| ||||  |||||||||||||||||||    
T  5455523 agaaatgatatttgtacatccactttgtgacaaccttttgacaactttctctct 5455470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 660
Target Start/End: Complemental strand, 33030175 - 33030118
Alignment:
Q  604 aaagaaatgatatatatacatcc-attttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| | |||| || ||||||| | ||||||||||||||||||||||||    
T  33030175 aaagaaatgatatttgtacaacccattttgtgataattttttgacaactttctctctc 33030118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Original strand, 6365187 - 6365239
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||| ||||| ||||||||||||||| ||||||||    
T  6365187 agaaatgatatttgtacaaccactttgtgacaattttttgacaattttctctc 6365239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 36909913 - 36909861
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||||| |||| |||| ||||||||||||||    
T  36909913 agaaatgatatttgtacaaccattttgtgacaacttttggacaactttctctc 36909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 27340 - 27394
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  27340 agaaatgatatatgtacatccattttgtgacaattttttgacaactttctctctc 27394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 49768939 - 49768885
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  49768939 agaaatgatatttgtacatccattttgcaacaattttttgacaactttctctctc 49768885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 657
Target Start/End: Complemental strand, 44250297 - 44250246
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  44250297 agaaatgatatttgtatatccattttgtaacaattttttgacaactttctct 44250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 38792959 - 38792905
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| ||||||| |||||| |||||||||| |||||||||||||||||    
T  38792959 agaaatgatatttatacattcattttctaacaattttatgacaactttctctctc 38792905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 46844311 - 46844257
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||||||||||||||||||||||||||||||||    
T  46844311 agaaatgatatctgtacaactattttgtaacaattttttgacaactttctctctc 46844257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 47540136 - 47540190
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||    
T  47540136 agaaatgatatatgtacatccactttttaacaattttttgataactttctctctc 47540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 37514202 - 37514147
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | ||||||||||||||||||| |||| |||||||||||||||||    
T  37514202 agaaatgatatttgtacatccattttgtaacaacttttgtgacaactttctctctc 37514147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 47288083 - 47288138
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||    
T  47288083 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctc 47288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 149357 - 149303
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| ||||||||||||||||||||||||||||    
T  149357 agaaatgatatttgtacaaccaatttctaacaattttttgacaactttctctctc 149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 1562606 - 1562552
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||    
T  1562606 agaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctc 1562552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 19910813 - 19910867
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||| ||||||| | ||||||||| ||||||||||||||||    
T  19910813 agaaatgatatatttacaaccatttttttacaatttttggacaactttctctctc 19910867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 40722034 - 40721980
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| ||| ||||||| ||||||||||||||||    
T  40722034 agaaatgatatttgtacatccattttataataatttttggacaactttctctctc 40721980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 608 - 658
Target Start/End: Complemental strand, 46364047 - 46363997
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||| | |||| ||||||| ||||||||||||||||||||||||||    
T  46364047 aaatgatatctgtacaaccattttctaacaattttttgacaactttctctc 46363997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 47998595 - 47998649
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||||||||||||| ||||||    
T  47998595 agaaatgatatttgtacaaccattttgtaacaactttttgacaactttttctctc 47998649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 48722070 - 48722124
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||||||||||| ||||| |||||||||| ||||||||||    
T  48722070 agaaatgatatttgtacatccattttgcaacaactttttgacaattttctctctc 48722124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 49424890 - 49424836
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| || ||||||||||| |||||||||||||||||||||    
T  49424890 agaaatgatatttgtacaacctttttgtaacaactttttgacaactttctctctc 49424836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 44170689 - 44170637
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||||| | ||||||||||||||||||||||    
T  44170689 agaaatgatatttgtacaaccattttgttataattttttgacaactttctctc 44170637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 47519788 - 47519736
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | ||||||||||||||||||| ||||  |||||||||||||||    
T  47519788 aaatgatatttgtacatccattttgtaacaacttttgaacaactttctctctc 47519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 4915743 - 4915688
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| |  ||||||||||||| ||||||||| |||||||||||||||||    
T  4915743 agaaatgatatttgaacatccattttgtgacaatttttatgacaactttctctctc 4915688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 51389317 - 51389368
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | ||||  ||||| ||||||||||||||||||||||||||    
T  51389317 agaaatgatatttgtacaatcatttagtaacaattttttgacaactttctct 51389368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 4514335 - 4514281
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||| |||| |||||| ||||||  | ||||||||||||||||||||||||||    
T  4514335 agaaataatatttatacaaccatttcattacaattttttgacaactttctctctc 4514281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 9472583 - 9472529
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||| ||| ||||||||||||||||||||||||    
T  9472583 agaaatgatatttgtacaactattttctaataattttttgacaactttctctctc 9472529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 10994222 - 10994168
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| ||||| ||||||||||||| ||||||    
T  10994222 agaaatgatatttgtacaaccattttgtgacaatcttttgacaactttatctctc 10994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 12241059 - 12241113
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  12241059 agaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 12241113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 12638826 - 12638880
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | | ||||||||||||||| ||||||||||||||||    
T  12638826 agaaatgatatttgtacaactactttgtaacaatttttagacaactttctctctc 12638880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 24772672 - 24772726
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| | |||| ||||||||||| |||||||||    
T  24772672 agaaatgatatttgtacatccattttatgacaactttttgacaaccttctctctc 24772726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 29513766 - 29513712
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  29513766 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 29513712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 31147232 - 31147286
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  31147232 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 31147286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 31469059 - 31469005
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctct 659  Q
    ||||||||||||| |||| ||||||| ||||||||||| |||||| |||||||||    
T  31469059 agaaatgatatatgtacaaccattttctaacaatttttgtgacaattttctctct 31469005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 33820406 - 33820352
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  33820406 agaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 33820352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 39010207 - 39010153
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| |||| ||||||||| |||||||||||    
T  39010207 agaaatgatatttgtacaaccattttgtgacaactttttgacagctttctctctc 39010153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 39881100 - 39881046
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||  |||||| |||||| |||||||||||||||||||||    
T  39881100 agaaatgatatttgtacaatcattttctaacaactttttgacaactttctctctc 39881046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 40335790 - 40335844
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||  |||||| | ||||||||||||||||||||||||||    
T  40335790 agaaatgatatttgtacaatcattttattacaattttttgacaactttctctctc 40335844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 40409236 - 40409182
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||| | ||||| ||| ||||||||||||||||||||||    
T  40409236 agaaatgatatttgtacatctactttgtgacagttttttgacaactttctctctc 40409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 40755922 - 40755976
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||||||||||| || ||||||||||    
T  40755922 agaaatgatatttgtacaaccattttctaacaattttttgataattttctctctc 40755976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 657
Target Start/End: Complemental strand, 43759224 - 43759170
Alignment:
Q  603 taaagaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    |||| |||| |||| | |||| ||||||| |||||||||||||||||||||||||    
T  43759224 taaaaaaataatatttgtacaaccattttctaacaattttttgacaactttctct 43759170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 44165910 - 44165964
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||  ||||||||||||||||||||||||||    
T  44165910 agaaatgatatttgtacaaccactttgcgacaattttttgacaactttctctctc 44165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 45779361 - 45779307
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||| | ||||||| | ||||||||||||||||||| ||||    
T  45779361 agaaatgatatttatacaactattttgttataattttttgacaactttctttctc 45779307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 46566930 - 46566984
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||| ||||| |||| |||| ||||||||||||||||    
T  46566930 agaaatgatatttgtacatccactttgtgacaacttttagacaactttctctctc 46566984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 51224908 - 51224854
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  51224908 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 51224854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 52392295 - 52392241
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||| ||||| |||| |||||||||||||| ||||||    
T  52392295 agaaatgatatttgtacatccactttgtgacaactttttgacaactttatctctc 52392241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 53357147 - 53357093
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | || | | ||||| ||||||||||||||||||||||||||||    
T  53357147 agaaatgatatttgtataactattttctaacaattttttgacaactttctctctc 53357093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 53662498 - 53662444
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | |||||||||||||||||  |||||||||||||||    
T  53662498 agaaatgatatttgtacaactattttgtaacaatttttgtacaactttctctctc 53662444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 55595950 - 55596004
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  55595950 agaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctc 55596004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 55996423 - 55996477
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||| ||||||||||    
T  55996423 agaaatgatatttgtacaatcattttctaacaattttttgacaattttctctctc 55996477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 56025257 - 56025311
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  56025257 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 56025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 18568885 - 18568832
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| |||||| ||||||||| |||| |||| ||||||||| |||||    
T  18568885 agaaatgatatttatacaaccattttgtgacaacttttggacaactttttctct 18568832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 169572 - 169520
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||||| |||| |||||||||| ||||||||    
T  169572 agaaatgatatttgtacaaccattttgtgacaactttttgacaattttctctc 169520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 4896570 - 4896518
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||    
T  4896570 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctc 4896518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 620 - 660
Target Start/End: Original strand, 6239395 - 6239435
Alignment:
Q  620 tacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||| |||||||| || ||||||||||||||||||||||||    
T  6239395 tacaaccattttgcaataattttttgacaactttctctctc 6239435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 12694496 - 12694444
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||||||||| |||| ||||||| |||||||||||||    
T  12694496 aaatgatatttgtacaaccattttgtgacaactttttgataactttctctctc 12694444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 38160841 - 38160789
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| |||||| | ||||||| |||||  |||||||||||||||||||    
T  38160841 aaatgatatttatacaactattttgtgacaatcatttgacaactttctctctc 38160789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 653
Target Start/End: Complemental strand, 45548855 - 45548807
Alignment:
Q  605 aagaaatgatatatatacatccattttgtaacaattttttgacaacttt 653  Q
    |||||||||||| | |||| ||||||||| | |||||||||||||||||    
T  45548855 aagaaatgatatttgtacaaccattttgtgataattttttgacaacttt 45548807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 48743713 - 48743765
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||| ||| ||||||||||||||||| ||||||||||    
T  48743713 aaatgatatttgtacaaccaatttttaacaattttttgacaattttctctctc 48743765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 39191904 - 39191851
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  39191904 agaaatgatatatgtacatccactttttaacaattttttgacaactttctctct 39191851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 12662017 - 12661963
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||| ||||| ||||||||||||||||||||||||||    
T  12662017 agaaatgatatttgtacatccactttgtgacaattttttgacaactttctctctc 12661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 20591544 - 20591490
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||    
T  20591544 agaaatgatatatgtacatccactttttgacaattttttgacaactttctctctc 20591490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 36416132 - 36416080
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||||||||||||    
T  36416132 agaaatgatatttgtacaaccattttctaacaattttttgacaactttctctc 36416080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 38500944 - 38500995
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||||    
T  38500944 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctct 38500995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 2456027 - 2456081
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||| | ||||| ||||||||||||||||||||||| ||||    
T  2456027 agaaatgatatctatacaactattttataacaattttttgacaactttctatctc 2456081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 6758861 - 6758807
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctct 659  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  6758861 agaaatgatatatgtacaaccattttctaacaatttttgtgacaactttctctct 6758807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 26660481 - 26660427
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||| |||| || ||||||||||||||||||    
T  26660481 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctc 26660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 26932073 - 26932019
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||| |||| || ||||||||||||||||||    
T  26932073 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctc 26932019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 31708371 - 31708425
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||    
T  31708371 agaaatgatatttgtacaaccattttataacaactttttgacaactttctctctc 31708425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 658
Target Start/End: Original strand, 2050928 - 2050980
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||||||||||||||| ||||||||| ||||    
T  2050928 agaaatgatatttgtacaaccattttgtaacaatttttggacaactttatctc 2050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 660
Target Start/End: Original strand, 4292782 - 4292837
Alignment:
Q  605 aagaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||||||| || | ||||||| | ||||||||| ||||||||||||||||    
T  4292782 aagaaatgatatatgtagaaccatttttttacaatttttggacaactttctctctc 4292837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 18695319 - 18695374
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||||    
T  18695319 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctc 18695374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 11666180 - 11666234
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||| | ||||||| | |||| |||||||||||||||||||||    
T  11666180 agaaatgatatttatataaccattttctcacaaatttttgacaactttctctctc 11666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 14324038 - 14323984
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |  ||||||||||||| |||| || ||||||||||||||||||    
T  14324038 agaaatgatatttgcacatccattttgtgacaacttcttgacaactttctctctc 14323984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 19271860 - 19271914
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||||||  ||| ||||||||||||||||    
T  19271860 agaaatgatatttgtacaaccattttgtaacaacgtttagacaactttctctctc 19271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 22920562 - 22920508
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||| |||| | |||| |||||||||||||| |||| ||||||||||||||||    
T  22920562 agaaataatatttgtacaaccattttgtaacaaattttggacaactttctctctc 22920508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 29807072 - 29807018
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||| || | |||| ||||||| ||||||| ||||||||||||||||||||    
T  29807072 agaaatgacatttgtacaaccattttttaacaatcttttgacaactttctctctc 29807018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 34381013 - 34381067
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||    
T  34381013 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctc 34381067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 39595273 - 39595327
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||    
T  39595273 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctc 39595327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 41192588 - 41192642
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||||  ||||||||||||||||||||||||||    
T  41192588 agaaatgatatttgtacaactattttgctacaattttttgacaactttctctctc 41192642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 657
Target Start/End: Original strand, 3141498 - 3141547
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||| |||||| ||| ||||| |||||||||||||||||| ||||    
T  3141498 aaatgatatttatacaaccactttgtgacaattttttgacaacttcctct 3141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 649
Target Start/End: Complemental strand, 24463303 - 24463258
Alignment:
Q  604 aaagaaatgatatatatacatccattttgtaacaattttttgacaa 649  Q
    |||||||| |||| | |||| |||||||||||||||||||||||||    
T  24463303 aaagaaattatatttgtacaaccattttgtaacaattttttgacaa 24463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 42699058 - 42699111
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||| ||||||||| |||| ||||||| ||||||||||||    
T  42699058 agaaatgatatttgtacaaccattttgtgacaactttttgataactttctctct 42699111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 4088444 - 4088496
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctct 657  Q
    ||||||||||| | |||||||||||| |||||| |||| ||||||||||||||    
T  4088444 agaaatgatatttgtacatccattttataacaacttttgtgacaactttctct 4088496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 15291073 - 15291021
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||||| | |||||||||||||| |||||||||||||    
T  15291073 aaatgatatttgtacaaccattgtttaacaattttttgataactttctctctc 15291021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 18449264 - 18449316
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||||||| ||||| |||| ||||| |||||||||||||||    
T  18449264 aaatgatatttgtacatccactttgtgacaactttttaacaactttctctctc 18449316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 657
Target Start/End: Complemental strand, 38293429 - 38293377
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctct 657  Q
    ||||||||||| | |||| ||||||| ||||||||||| ||||||||||||||    
T  38293429 agaaatgatatttttacaaccattttataacaatttttgtgacaactttctct 38293377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 27630898 - 27630952
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| | ||||||||||||||||||||||||||    
T  27630898 agaaatgatatttgtacatccattttatgacaattttttgacaactttctctctc 27630952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 31806300 - 31806354
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||    
T  31806300 agaaatgatatttgtacaaccattttctaacaattttttgacaactttctctctc 31806354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 20473780 - 20473831
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | |||| ||||||| |||||||||||||||||||||||||    
T  20473780 agaaatgatatttgtacaaccattttataacaattttttgacaactttctct 20473831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11114739 - 11114685
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||||||||||| || || |||||||||||||||||||||    
T  11114739 agaaatgatatttgtacatccattttgcaataactttttgacaactttctctctc 11114685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11223929 - 11223875
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||| |||| || ||||||||||||||||||    
T  11223929 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctc 11223875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11879560 - 11879506
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| ||| |||| ||||| |||| |||||||||||||||||||||    
T  11879560 agaaatgatatatgtacgtccactttgtgacaactttttgacaactttctctctc 11879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11896976 - 11896922
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| ||| |||| ||||| |||| |||||||||||||||||||||    
T  11896976 agaaatgatatatgtacgtccactttgtgacaactttttgacaactttctctctc 11896922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 32174955 - 32175009
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||||   |||||||| ||||| ||||||||||||||||||||||||||    
T  32174955 agaaatgatattcgtacatccactttgtgacaattttttgacaactttctctctc 32175009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 35818938 - 35818992
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |  ||| ||||||| ||||||||||||||||||||||||||||    
T  35818938 agaaatgatatttgcacaaccattttctaacaattttttgacaactttctctctc 35818992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 35937582 - 35937528
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||| ||||||||||||||||    
T  35937582 agaaatgatatttgtacaaccattttgtaacaacttttggacaactttctctctc 35937528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 38504171 - 38504224
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||| ||||||||  |||||||||||||||||||||||||    
T  38504171 agaaatgatatttgtacaaccattttgctacaattttttgacaactttctctct 38504224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 31666058 - 31666006
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||    
T  31666058 aaatgatatatgtacaaccattttgtgacaatttttagacaactttctttctc 31666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Complemental strand, 1332538 - 1332487
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||  | |||| ||||||| |||||||||||||||||||||||||    
T  1332538 agaaatgataattgtacaaccattttataacaattttttgacaactttctct 1332487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 10644872 - 10644817
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||||    
T  10644872 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctc 10644817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 10653851 - 10653799
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||||||||||||||| ||| ||||||  ||||||||||||||| ||||    
T  10653851 agaaatgatatatatacatccactttttaacaa--ttttgacaactttctttctc 10653799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Complemental strand, 43873761 - 43873710
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||| |||||    
T  43873761 agaaatgatatttgtacaaccattttgtgacaattttttgacaactctctct 43873710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 3650114 - 3650168
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||||| |||||||| |||||||||||||||    
T  3650114 agaaatgatatttgtacaaccaatttgtaataattttttaacaactttctctctc 3650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 10344325 - 10344379
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||| ||||| ||| ||||||| ||||||||||||||||    
T  10344325 agaaatgatatttgtacatctattttataataatttttggacaactttctctctc 10344379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 12659053 - 12659107
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  12659053 agaaatgatatttgtacaaccaatttttaacaactttttgacaactttctctctc 12659107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 14548893 - 14548839
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| ||| ||||||| ||||||||||||||||    
T  14548893 agaaatgatatttgtacaaccattttttaataatttttagacaactttctctctc 14548839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 20995128 - 20995074
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||||||||||| | |||||||||  ||||| |||||||||    
T  20995128 agaaatgatatttatacatccattttatgacaatttttgtacaaccttctctctc 20995074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 24116041 - 24116095
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||| |||| | ||||| ||||||| |||||||||||||||||||||| ||||    
T  24116041 agaaattatatttgtacattcattttgcaacaattttttgacaactttctttctc 24116095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 29509267 - 29509321
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  29509267 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 29509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 34970208 - 34970262
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||||  | ||||||||||| |||||||||||||||||||||    
T  34970208 agaaatgatatttgtacaatccttttgtaacaactttttgacaactttctctctc 34970262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 34996430 - 34996376
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  34996430 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 34996376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 45101397 - 45101451
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||    
T  45101397 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctc 45101451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 7814662 - 7814609
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | || | ||||||| |||||||||| ||||||||||||||||    
T  7814662 agaaatgatatttttagaaccattttttaacaattttgtgacaactttctctct 7814609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 6105504 - 6105452
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||||||| | |||| |||||||||||||||||||||    
T  6105504 aaatgatatttgtacaaccatttttttacaactttttgacaactttctctctc 6105452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 39153752 - 39153700
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||  | ||||| ||||||||||||||||||||||||||    
T  39153752 agaaatgatatttgtaccacaattttctaacaattttttgacaactttctctc 39153700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 42130999 - 42131051
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| |||||| ||||| || ||||| |||| ||||||||||||||||    
T  42130999 aaatgatatttatacaaccattctgcaacaacttttggacaactttctctctc 42131051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 2790178 - 2790232
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaactttctctctc 2790232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 35823045 - 35822990
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||    
T  35823045 agaaatgatatttgtacatccattttctaacaatttttatgacaactttctctctc 35822990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 36352657 - 36352602
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  36352657 agaaatgatatatgtacaaccattttgtaacaacttttgtgacaactttctctctc 36352602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 46829480 - 46829535
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||    
T  46829480 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctc 46829535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 19426581 - 19426635
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||    
T  19426581 agaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctc 19426635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 28081852 - 28081798
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||| |||||||| |||||||||||||||    
T  28081852 agaaatgatatttgtacaaccattttgtaataatttttttacaactttctctctc 28081798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 33212043 - 33212097
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||||||| ||||||    
T  33212043 agaaatgatatttgtacaaccattttctaacaattttttgacaactttatctctc 33212097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 40842406 - 40842460
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||| ||||| ||||| ||||||||||||||||||||    
T  40842406 agaaatgatatttgtacatccactttgtgacaatcttttgacaactttctctctc 40842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 41815150 - 41815200
Alignment:
Q  610 atgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  41815150 atgatatatgtacaaccaatttctaacaattttttgacaactttctctctc 41815200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 660
Target Start/End: Original strand, 41890529 - 41890582
Alignment:
Q  607 gaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||| | |||||| |||||| |||||||||||||||| ||||||||||    
T  41890529 gaaatgatatttgtacatcaattttgcaacaattttttgacaattttctctctc 41890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 37899283 - 37899228
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| |  ||||||||||||| ||||||||| |||||||||||||||||    
T  37899283 agaaatgatatttgaacatccattttgtgacaatttttgtgacaactttctctctc 37899228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 42584803 - 42584858
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||||| |||| ||||||| |||||| |||| |||||||||||||||||    
T  42584803 agaaatgatatatgtacaaccattttctaacaacttttgtgacaactttctctctc 42584858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 9055268 - 9055322
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  9055268 agaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctc 9055322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 23761060 - 23761114
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||| ||||| | | || |||||||||||||||||||||    
T  23761060 agaaatgatatatgtacatcgattttttgataactttttgacaactttctctctc 23761114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 24267717 - 24267663
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| | |||| |||| ||||||||||||||||    
T  24267717 agaaatgatatatgtacatccactttttgacaacttttagacaactttctctctc 24267663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 36920805 - 36920858
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||  ||||||| ||||||||||||||||||||||||||||    
T  36920805 agaaatgatatttgtactaccatttt-taacaattttttgacaactttctctctc 36920858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 40077255 - 40077309
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||| |||| | |||| | ||||||||||||||||| ||||||||||||||||    
T  40077255 agaaattatatttgtacaactattttgtaacaatttttagacaactttctctctc 40077309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 656
Target Start/End: Original strand, 49128724 - 49128774
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctc 656  Q
    ||||||||||| |||||| |||||||||||||| ||||||| |||| ||||    
T  49128724 agaaatgatatttatacaaccattttgtaacaactttttgataactctctc 49128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 6269369 - 6269422
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||| | |||| ||||||| ||||||||||| |||||||||||||||||    
T  6269369 aaatgatatttgtacaaccattttataacaatttttgtgacaactttctctctc 6269422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 651
Target Start/End: Complemental strand, 25940702 - 25940657
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaact 651  Q
    ||||||||||| | |||| ||||||||||||||||||| |||||||    
T  25940702 agaaatgatatttgtacaaccattttgtaacaatttttagacaact 25940657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 30941179 - 30941232
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||| ||| ||||||||||||||| || ||||||||||||    
T  30941179 agaaatgatatttgtacaaccactttgtaacaatttttagataactttctctct 30941232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 655
Target Start/End: Original strand, 41966333 - 41966382
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttct 655  Q
    ||||||||||| | |||| ||| ||||| |||||||||||||||||||||    
T  41966333 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttct 41966382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 42276092 - 42276145
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||| | ||||| |||||||||||||| ||||||||||||    
T  42276092 agaaatgatatttgtacaactattttctaacaattttttgataactttctctct 42276145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 651
Target Start/End: Original strand, 42663085 - 42663130
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaact 651  Q
    ||||||||||| | |||||||||||||| |||| ||||||||||||    
T  42663085 agaaatgatatttgtacatccattttgtgacaactttttgacaact 42663130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 650
Target Start/End: Complemental strand, 32919050 - 32919006
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaac 650  Q
    ||||||||||| ||||||  |||||||| ||||||||||||||||    
T  32919050 agaaatgatatttatacaatcattttgtgacaattttttgacaac 32919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 48867000 - 48866948
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||    
T  48867000 agaaatgatatttgtacagccactttgtgacaactttttgacaactttctctc 48866948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 12489651 - 12489597
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||||||||||||||    
T  12489651 agaaatgatatatgtacatctgttttttaacaattttttgacaactttctctctc 12489597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 24611845 - 24611899
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||    
T  24611845 agaaatgatatatgtacatccactttttaacaactttttgacaactttctctctc 24611899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 24910204 - 24910150
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||||    
T  24910204 agaaatgatatatgtacatccactttttaacaattttttgacaattttctctctc 24910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 51193201 - 51193147
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||    
T  51193201 agaaatgatatttgtacatccattttataacaatttttggacaactttctctctc 51193147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 660
Target Start/End: Original strand, 18959003 - 18959059
Alignment:
Q  604 aaagaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||| ||||||||| |||| |||||||||| ||||||||||    
T  18959003 aaagaaatgatatttatacaaccattttgttacaactttttgacaattttctctctc 18959059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 52437495 - 52437550
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  52437495 agaaatgatatatatacaaccattttttaataatttttgtgacaactttctctctc 52437550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 18541121 - 18541067
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||    
T  18541121 agaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctc 18541067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 29632435 - 29632489
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||  ||||||||||||||||||||||| ||||||||||    
T  29632435 agaaatgatatttgtacatttattttgtaacaattttttgacaattttctctctc 29632489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 30530644 - 30530590
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||| ||||||||| |||| |||| ||||||||||||||||    
T  30530644 agaaatgatatttatacaaccattttgtgacaacttttagacaactttctctctc 30530590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 40610230 - 40610284
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| ||||||| |||||| | |||||||||||||||| |||||||||    
T  40610230 agaaatgatatttatacattcattttatgacaattttttgacaaccttctctctc 40610284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 49596236 - 49596290
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| | ||||||||||||||||||||||||||    
T  49596236 agaaatgatatttgtacaaccattttattacaattttttgacaactttctctctc 49596290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 49621364 - 49621418
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||| ||||||| ||||||||||||||||    
T  49621364 agaaatgatatttgtacaaccattttgtaataatttttagacaactttctctctc 49621418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 660
Target Start/End: Complemental strand, 1724303 - 1724248
Alignment:
Q  604 aaagaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||||| |||||||| ||| | |||| |||||||||||||||||||||    
T  1724303 aaagaaatgatatatgtacatccactttttgacaa-tttttgacaactttctctctc 1724248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 654
Target Start/End: Original strand, 39669807 - 39669855
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttc 654  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||    
T  39669807 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttc 39669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 9445109 - 9445160
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    |||||||||||   |||| |||||||||||||| ||||||||||||||||||    
T  9445109 agaaatgatattcgtacaaccattttgtaacaactttttgacaactttctct 9445160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 660
Target Start/End: Complemental strand, 44641978 - 44641919
Alignment:
Q  601 tctaaagaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||| ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  44641978 tctagagaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 44641919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 46003469 - 46003520
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||||| || ||||||||||| |||||||||| |||| |||||||    
T  46003469 agaaatgatatatgtatatccattttgtgacaattttttaacaattttctct 46003520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Original strand, 49906492 - 49906543
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||| | ||||| ||||||| |||||||||||||||| |||||||||    
T  49906492 aaatgatatttgtacattcattttgcaacaattttttgacaattttctctct 49906543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 1156480 - 1156534
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||| |||| | ||||| ||||||| || ||||||||||||||||||||||||    
T  1156480 agaaattatatttgtacattcattttgcaataattttttgacaactttctctctc 1156534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 3919301 - 3919355
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| | ||||||| ||||||||||||||||    
T  3919301 agaaatgatatttgtacaaccattttgttataatttttggacaactttctctctc 3919355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 7203914 - 7203860
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | || | |||||||| |||||||||| ||||||||||||||||    
T  7203914 agaaatgatatttgtataaccattttgcaacaatttttagacaactttctctctc 7203860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 11068426 - 11068480
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  11068426 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 11068480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11097954 - 11097900
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||| |||| ||||  |||||||||||||||    
T  11097954 agaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctc 11097900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 21433471 - 21433417
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctct 659  Q
    ||||||||||| | |||| |||||||||||||| |||| ||||||||||||||||    
T  21433471 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctct 21433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 26501296 - 26501350
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||||| || |||| ||||||||||||||||    
T  26501296 agaaatgatatttgtacaaccattttgtaataacttttggacaactttctctctc 26501350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 27810317 - 27810263
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  27810317 agaaatgatatttgtacaaccaatttctaacaactttttgacaactttctctctc 27810263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 30505406 - 30505352
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| ||||||||||||||||| ||||||||||    
T  30505406 agaaatgatatttgtacaaccaatttctaacaattttttgacaaatttctctctc 30505352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 36231776 - 36231722
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| ||||| ||| ||||||||||||||||    
T  36231776 agaaatgatatttgtacaaccattttgtgacaatatttagacaactttctctctc 36231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 36690642 - 36690588
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  36690642 agaaatgatatttgtacaaccaatttctcacaattttttgacaactttctctctc 36690588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 36706743 - 36706689
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  36706743 agaaatgatatttgtacaaccaatttctcacaattttttgacaactttctctctc 36706689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 43196159 - 43196105
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||  |||| |||||||||| ||||||||||    
T  43196159 agaaatgatatttgtacatccattttgctacaactttttgacaattttctctctc 43196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 44112455 - 44112509
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  44112455 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 44112509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 50226949 - 50226895
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||    
T  50226949 agaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctc 50226895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 46947982 - 46948035
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||||||||||| | |||| ||||||||||| ||||||||    
T  46947982 agaaatgatatttgtacatccattttatgacaactttttgacaaccttctctct 46948035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 29643486 - 29643433
Alignment:
Q  607 gaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||||| |||| ||||||| | ||||||||||||||||||||||||||    
T  29643486 gaaatgatatatgtacaaccattttctgacaattttttgacaactttctctctc 29643433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 11785356 - 11785410
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||| ||||    
T  11785356 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctc 11785410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 28965910 - 28965856
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||    
T  28965910 agaaatgatatttgtacaaccattttgttacaactttttgacaactttctctctc 28965856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 8778942 - 8778890
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||    
T  8778942 agaaatgatatttgtacaaccattttttaacaactttttgacaactttctctc 8778890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 3821379 - 3821433
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  3821379 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 3821433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 9954549 - 9954603
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||    
T  9954549 agaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctctc 9954603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 16743336 - 16743282
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| ||| ||||||| ||||||||||||||||    
T  16743336 agaaatgatatttgtacaaccattttttaataatttttagacaactttctctctc 16743282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 17835613 - 17835667
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| || |||| |||||| |||||||||||||||||||||    
T  17835613 agaaatgatatttgtacaacccttttctaacaactttttgacaactttctctctc 17835667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 18792502 - 18792448
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| | |||| ||||| |||||||||||||||    
T  18792502 agaaatgatatatctacatccactttttgacaactttttaacaactttctctctc 18792448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 19789146 - 19789092
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| | |||| |||||||||||||||||||||    
T  19789146 agaaatgatatttgtacaaccattttattacaactttttgacaactttctctctc 19789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 25554246 - 25554300
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||  ||||||||| |||||||||||||||    
T  25554246 agaaatgatatttgtacaaccattttgtggcaatttttttacaactttctctctc 25554300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 25924934 - 25924880
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  25924934 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 25924880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 22492097 - 22492044
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||||| |||| ||||||||| | || || |||||||||||||||||    
T  22492097 agaaatgatatatgtacaaccattttgtgataacttcttgacaactttctctct 22492044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 14094914 - 14094966
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  14094914 aaatgatatttgtacagccaatttctaacaactttttgacaactttctctctc 14094966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 21506339 - 21506391
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||||||| | |||| |||||||||||||||||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctc 21506391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 34490350 - 34490402
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||||||| ||||||||||| ||||| ||||||||||    
T  34490350 aaatgatatttgtacaaccattttttaacaatttttagacaattttctctctc 34490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 108432 - 108486
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| ||||||||||||||||||||||||||    
T  108432 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctctc 108486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 11335372 - 11335318
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||    
T  11335372 agaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctc 11335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 35376621 - 35376567
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| ||||||||| ||||||||||||||||    
T  35376621 agaaatgatatttgtacaaccattttgtgacaatttttagacaactttctctctc 35376567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 39604316 - 39604262
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||  |||||||||||||||||||||||||||    
T  39604316 agaaatgatatttgtacaaccatttttcaacaattttttgacaactttctctctc 39604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 660
Target Start/End: Original strand, 41369595 - 41369652
Alignment:
Q  603 taaagaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||| ||||||||| | |||| ||||||| ||| ||||||||||||||||||||||||    
T  41369595 taaaaaaatgatatttgtacaaccattttctaataattttttgacaactttctctctc 41369652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 658
Target Start/End: Original strand, 5398919 - 5398971
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||| ||||| ||||||||||||||||||||||||    
T  5398919 agaaatgatatttgtacaaccactttgtgacaattttttgacaactttctctc 5398971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 29573426 - 29573371
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||||    
T  29573426 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctc 29573371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 657
Target Start/End: Original strand, 47849673 - 47849724
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctct 657  Q
    ||||||||||| | |||| ||||||||| | |||||||||||||||||||||    
T  47849673 agaaatgatatttgtacaaccattttgtgataattttttgacaactttctct 47849724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 48352997 - 48353052
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| |||||| |||| |||||||||||||||||    
T  48352997 agaaatgatatttgtacatccattttttaacaacttttgtgacaactttctctctc 48353052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 52714734 - 52714789
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttt-tgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| ||||||||||| ||| |||||||||||||    
T  52714734 agaaatgatatttgtacatccattttctaacaatttttgtgataactttctctctc 52714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 462471 - 462417
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| |||| |||| ||||||||||||||||    
T  462471 agaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctc 462417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 2482744 - 2482690
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||||| |||| ||||  |||||||||||||||    
T  2482744 agaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctc 2482690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 20215949 - 20216003
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||||| ||||||||| ||||||||||||||||    
T  20215949 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctc 20216003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 30805673 - 30805619
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | ||| ||||||||| ||||| ||||||||||||| |||||||    
T  30805673 agaaatgatatttgtacctccattttgcaacaactttttgacaacttcctctctc 30805619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 37215301 - 37215247
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| |||||| ||| ||| | ||||||||||||||||||||| ||||    
T  37215301 agaaatgatatttatacaaccactttcttacaattttttgacaactttctgtctc 37215247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 37754448 - 37754502
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||| ||||| ||| ||||||| ||||||||||||||||    
T  37754448 agaaatgatatttgtacatctattttataataatttttggacaactttctctctc 37754502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 40159908 - 40159854
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  40159908 agaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 40159854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 41877689 - 41877743
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||  |||| |||||||||||||||||||||    
T  41877689 agaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctc 41877743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 47056596 - 47056542
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | | || |||||||| |||||||||| ||||||||||||||||    
T  47056596 agaaatgatatttgtgcaaccattttgcaacaatttttggacaactttctctctc 47056542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 48179123 - 48179069
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| | ||||| ||||| ||||||||||||||||||||||    
T  48179123 agaaatgatatttgtacaactattttctaacagttttttgacaactttctctctc 48179069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 49761256 - 49761202
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||||||||  |||||||||||||||    
T  49761256 agaaatgatatttgtacaaccattttctaacaatttttgtacaactttctctctc 49761202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 51032694 - 51032640
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| |||||| |||||||||| ||||||||||    
T  51032694 agaaatgatatttgtacaaccattttctaacaactttttgacaattttctctctc 51032640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 53718050 - 53718103
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| || ||||||||||||| ||||  ||||||||||||||||||||    
T  53718050 agaaatgatatttaaacatccattttgtgacaa-cttttgacaactttctctctc 53718103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 53932461 - 53932407
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||||| ||||||||| |||||||||| |||||    
T  53932461 agaaatgatatttgtacaaccattttgtgacaatttttggacaactttcactctc 53932407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 12792639 - 12792692
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | |||| ||| ||||| ||||||||| |||||||||||||||    
T  12792639 agaaatgatatttgtacaaccactttgtgacaatttttagacaactttctctct 12792692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 26452791 - 26452738
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaa-ttttttgacaactttctctctc 660  Q
    |||||||||||||||| ||||||| |||||| |||| | |||||||||||||||    
T  26452791 aaatgatatatatacaaccattttctaacaacttttgttacaactttctctctc 26452738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 47988554 - 47988501
Alignment:
Q  607 gaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  47988554 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 47988501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 47997841 - 47997788
Alignment:
Q  607 gaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  47997841 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 47997788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 48007128 - 48007075
Alignment:
Q  607 gaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    |||||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  48007128 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctc 48007075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 34271560 - 34271508
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| ||| |||||||||| ||||||| |||||||||||    
T  34271560 agaaatgatatttgtacaaccactttgtaacaactttttgataactttctctc 34271508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Original strand, 46003706 - 46003758
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||||||| ||| | ||||| ||||||||||||||||||    
T  46003706 agaaatgatatttgtacatccactttcttacaatcttttgacaactttctctc 46003758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 48649583 - 48649635
Alignment:
Q  608 aaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||| | |||| ||| ||| |||||| |||||||||||||||||||||    
T  48649583 aaatgatatttgtacaaccactttctaacaactttttgacaactttctctctc 48649635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 72239 - 72187
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||| |||||||||||||| |||| ||||||||||||||    
T  72239 agaaatgatatttgtacaaccattttgtaacaacttttagacaactttctctc 72187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 404747 - 404802
Alignment:
Q  604 aaagaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||||| | ||||  |||||| ||||||||||||||||||||| |||||    
T  404747 aaagaaatgatatgtgtacaatcattttttaacaattttttgacaactttttctct 404802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 11639 - 11693
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||||| |||||||| ||| | |||| ||||| |||||||||||||||    
T  11639 agaaatgatatatctacatccactttttgacaactttttaacaactttctctctc 11693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 27133 - 27079
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||  ||||||| ||||||||||||||||||||    
T  27133 agaaatgatatttgtacaaccatttcttaacaatcttttgacaactttctctctc 27079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 155907 - 155961
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||||||| | |||| |||||||||||||||||||||    
T  155907 agaaatgatatttgtacaaccattttattacaactttttgacaactttctctctc 155961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 199267 - 199321
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||| ||| ||| | ||||||||||||||||||||||||||    
T  199267 agaaatgatatttgtacaaccactttattacaattttttgacaactttctctctc 199321  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 6428 - 6482
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctctc 660  Q
    ||||||||||| | |||||||||||| | |||| ||||||||||| |||||||||    
T  6428 agaaatgatatttgtacatccattttatgacaactttttgacaacattctctctc 6482  T

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Target: scaffold0687 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 659
Target Start/End: Original strand, 7061 - 7114
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctct 659  Q
    ||||||||||| | || | ||||||| |||||||||| ||||||||||||||||    
T  7061 agaaatgatatttttagaaccattttttaacaattttgtgacaactttctctct 7114  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 658
Target Start/End: Complemental strand, 190952 - 190900
Alignment:
Q  606 agaaatgatatatatacatccattttgtaacaattttttgacaactttctctc 658  Q
    ||||||||||| | |||||||| ||| | | ||||||||||||||||||||||    
T  190952 agaaatgatatgtctacatccactttatgataattttttgacaactttctctc 190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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