View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11976_low_18 (Length: 302)

Name: NF11976_low_18
Description: NF11976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11976_low_18
NF11976_low_18
[»] chr1 (75 HSPs)
chr1 (1-189)||(15884405-15884593)
chr1 (189-292)||(47955305-47955409)
chr1 (192-292)||(17518555-17518653)
chr1 (189-244)||(8108993-8109048)
chr1 (190-292)||(41082909-41083011)
chr1 (183-244)||(48105116-48105177)
chr1 (184-244)||(44911019-44911079)
chr1 (181-244)||(28633711-28633774)
chr1 (189-244)||(49284408-49284463)
chr1 (189-247)||(13589656-13589713)
chr1 (190-244)||(48190771-48190825)
chr1 (180-244)||(9347116-9347180)
chr1 (188-244)||(32163043-32163099)
chr1 (188-244)||(48191355-48191411)
chr1 (189-244)||(39692000-39692055)
chr1 (188-247)||(47955605-47955664)
chr1 (186-247)||(17518299-17518359)
chr1 (193-242)||(22149701-22149750)
chr1 (193-242)||(42611188-42611237)
chr1 (190-245)||(20371352-20371406)
chr1 (193-292)||(31847898-31847997)
chr1 (188-247)||(31848189-31848248)
chr1 (188-247)||(41083208-41083266)
chr1 (193-244)||(50430081-50430132)
chr1 (193-247)||(1176839-1176893)
chr1 (190-244)||(6002237-6002291)
chr1 (188-246)||(8108719-8108777)
chr1 (186-244)||(19008750-19008808)
chr1 (189-279)||(22149402-22149490)
chr1 (190-244)||(27172116-27172169)
chr1 (190-243)||(20480613-20480665)
chr1 (188-244)||(26815119-26815175)
chr1 (188-244)||(28634157-28634213)
chr1 (187-243)||(39690791-39690847)
chr1 (193-241)||(46823846-46823894)
chr1 (192-244)||(50526472-50526524)
chr1 (183-246)||(1177016-1177079)
chr1 (189-244)||(4692433-4692488)
chr1 (191-242)||(13918869-13918920)
chr1 (189-244)||(20480167-20480221)
chr1 (189-240)||(27172545-27172596)
chr1 (193-244)||(48104681-48104732)
chr1 (189-244)||(48313792-48313847)
chr1 (185-244)||(50615621-50615679)
chr1 (185-244)||(50623449-50623507)
chr1 (190-244)||(6703894-6703948)
chr1 (5-55)||(12611460-12611510)
chr1 (190-244)||(13918446-13918500)
chr1 (193-242)||(22149580-22149630)
chr1 (190-244)||(26814694-26814748)
chr1 (189-239)||(50615239-50615289)
chr1 (189-239)||(50623067-50623117)
chr1 (181-242)||(6703451-6703512)
chr1 (195-243)||(17518481-17518530)
chr1 (189-242)||(50429655-50429708)
chr1 (188-240)||(999529-999580)
chr1 (192-244)||(6002894-6002946)
chr1 (188-244)||(9347551-9347606)
chr1 (188-243)||(44911438-44911493)
chr1 (189-244)||(46824278-46824333)
chr1 (213-244)||(49285055-49285086)
chr1 (190-240)||(1176717-1176766)
chr1 (189-239)||(19007734-19007783)
chr1 (190-244)||(21687025-21687079)
chr1 (190-240)||(49317752-49317801)
chr1 (190-240)||(49318170-49318219)
chr1 (140-189)||(15881578-15881630)
chr1 (193-242)||(42611616-42611665)
chr1 (191-244)||(47498495-47498547)
chr1 (195-243)||(47955434-47955483)
chr1 (176-240)||(999098-999161)
chr1 (190-238)||(21687473-21687520)
chr1 (193-240)||(31848019-31848067)
chr1 (191-242)||(46056904-46056953)
chr1 (188-240)||(50949569-50949621)
[»] chr7 (68 HSPs)
chr7 (190-292)||(3687608-3687710)
chr7 (186-287)||(9412281-9412383)
chr7 (189-247)||(9412022-9412080)
chr7 (184-244)||(44600135-44600195)
chr7 (186-244)||(13863309-13863367)
chr7 (190-244)||(44599489-44599543)
chr7 (190-247)||(13772898-13772955)
chr7 (184-244)||(8643766-8643826)
chr7 (188-244)||(10533032-10533088)
chr7 (188-244)||(37889259-37889315)
chr7 (186-245)||(9034863-9034922)
chr7 (181-244)||(37888824-37888887)
chr7 (189-244)||(37972396-37972451)
chr7 (190-244)||(9035293-9035347)
chr7 (186-244)||(20418884-20418942)
chr7 (187-244)||(13772638-13772695)
chr7 (184-244)||(16198977-16199037)
chr7 (186-238)||(23686723-23686775)
chr7 (184-244)||(46816311-46816371)
chr7 (189-244)||(3205093-3205148)
chr7 (189-236)||(13863964-13864011)
chr7 (189-244)||(17156966-17157021)
chr7 (189-244)||(20419324-20419379)
chr7 (189-244)||(22740155-22740210)
chr7 (189-240)||(29292921-29292972)
chr7 (190-247)||(3687353-3687411)
chr7 (186-243)||(6908209-6908265)
chr7 (187-244)||(37971957-37972014)
chr7 (191-247)||(8953886-8953941)
chr7 (185-241)||(29293349-29293405)
chr7 (189-244)||(13744233-13744287)
chr7 (193-244)||(18863970-18864021)
chr7 (189-244)||(30857904-30857959)
chr7 (191-241)||(5735253-5735303)
chr7 (190-244)||(13741557-13741611)
chr7 (188-242)||(18864404-18864457)
chr7 (193-247)||(27096339-27096392)
chr7 (193-247)||(27181911-27181964)
chr7 (191-245)||(39983700-39983754)
chr7 (190-244)||(48359320-48359373)
chr7 (190-243)||(23686421-23686473)
chr7 (190-243)||(35079960-35080012)
chr7 (189-242)||(38826915-38826968)
chr7 (188-245)||(42419028-42419084)
chr7 (190-242)||(18925062-18925114)
chr7 (188-244)||(33628660-33628716)
chr7 (190-244)||(3204669-3204721)
chr7 (194-244)||(18925229-18925280)
chr7 (193-244)||(22740591-22740641)
chr7 (193-247)||(27096168-27096223)
chr7 (193-247)||(27182080-27182135)
chr7 (192-247)||(29291808-29291863)
chr7 (192-247)||(33628397-33628451)
chr7 (193-240)||(38191265-38191312)
chr7 (193-243)||(6908485-6908534)
chr7 (191-244)||(18925322-18925373)
chr7 (194-247)||(38191387-38191440)
chr7 (195-243)||(9412202-9412251)
chr7 (190-247)||(29292038-29292095)
chr7 (189-230)||(34235737-34235778)
chr7 (192-245)||(34235977-34236030)
chr7 (189-238)||(42418590-42418639)
chr7 (190-244)||(5349733-5349784)
chr7 (195-242)||(13772793-13772841)
chr7 (188-242)||(15567276-15567327)
chr7 (190-238)||(27096047-27096094)
chr7 (190-238)||(27182209-27182256)
chr7 (208-244)||(35080223-35080259)
[»] chr2 (64 HSPs)
chr2 (188-292)||(30190921-30191026)
chr2 (189-292)||(6171408-6171511)
chr2 (189-287)||(11883622-11883721)
chr2 (176-247)||(20347461-20347532)
chr2 (189-287)||(24832330-24832429)
chr2 (185-247)||(11883923-11883985)
chr2 (186-244)||(26841583-26841641)
chr2 (188-244)||(2639482-2639538)
chr2 (193-292)||(40469680-40469780)
chr2 (189-244)||(18296693-18296748)
chr2 (186-244)||(5378657-5378715)
chr2 (186-244)||(41790912-41790970)
chr2 (189-244)||(2638819-2638874)
chr2 (189-244)||(37720203-37720258)
chr2 (193-279)||(15920781-15920867)
chr2 (190-244)||(17850978-17851032)
chr2 (190-244)||(26842238-26842292)
chr2 (191-244)||(18296077-18296130)
chr2 (190-247)||(30191222-30191279)
chr2 (193-246)||(32673141-32673193)
chr2 (188-244)||(5379959-5380015)
chr2 (193-244)||(7591204-7591255)
chr2 (193-244)||(8851151-8851202)
chr2 (189-244)||(8851582-8851637)
chr2 (189-247)||(26737481-26737537)
chr2 (192-242)||(6325349-6325399)
chr2 (190-244)||(16910827-16910881)
chr2 (190-244)||(26737781-26737835)
chr2 (189-242)||(6495723-6495776)
chr2 (190-247)||(40469427-40469484)
chr2 (190-287)||(43495562-43495658)
chr2 (190-242)||(6171156-6171207)
chr2 (188-244)||(7664246-7664302)
chr2 (187-247)||(17346032-17346091)
chr2 (192-247)||(18055050-18055103)
chr2 (188-244)||(20347161-20347217)
chr2 (186-242)||(29230278-29230334)
chr2 (195-242)||(40469607-40469655)
chr2 (193-240)||(5793450-5793497)
chr2 (193-244)||(26692820-26692871)
chr2 (193-247)||(43495481-43495535)
chr2 (190-244)||(7664673-7664727)
chr2 (189-247)||(43495308-43495366)
chr2 (190-243)||(32672842-32672895)
chr2 (195-243)||(32673020-32673069)
chr2 (195-242)||(11883751-11883799)
chr2 (184-244)||(16911269-16911328)
chr2 (190-242)||(40221313-40221364)
chr2 (197-240)||(6324924-6324967)
chr2 (186-244)||(7979563-7979619)
chr2 (193-247)||(17345736-17345788)
chr2 (193-247)||(18055169-18055224)
chr2 (193-244)||(18055316-18055367)
chr2 (185-244)||(18750126-18750184)
chr2 (190-244)||(7591850-7591904)
chr2 (193-243)||(15321515-15321565)
chr2 (195-243)||(6171334-6171383)
chr2 (186-246)||(15321388-15321446)
chr2 (195-243)||(20347341-20347390)
chr2 (195-243)||(26737657-26737706)
chr2 (193-242)||(29343584-29343633)
chr2 (195-243)||(30191051-30191100)
chr2 (191-243)||(6495468-6495519)
chr2 (192-244)||(19141446-19141497)
[»] chr8 (65 HSPs)
chr8 (190-292)||(41662354-41662457)
chr8 (192-287)||(765736-765832)
chr8 (189-287)||(12281123-12281222)
chr8 (185-292)||(16928937-16929043)
chr8 (190-292)||(15156136-15156239)
chr8 (184-242)||(13026629-13026687)
chr8 (190-247)||(12281423-12281480)
chr8 (182-247)||(37752413-37752478)
chr8 (187-247)||(15155880-15155940)
chr8 (189-244)||(9823361-9823416)
chr8 (190-292)||(43245871-43245974)
chr8 (190-244)||(39724048-39724102)
chr8 (189-247)||(43246173-43246231)
chr8 (186-243)||(15042141-15042198)
chr8 (190-247)||(16929239-16929296)
chr8 (180-244)||(13936713-13936776)
chr8 (193-244)||(13027281-13027332)
chr8 (185-244)||(34498555-34498614)
chr8 (190-244)||(22851390-22851444)
chr8 (190-244)||(37752084-37752138)
chr8 (187-244)||(37396705-37396762)
chr8 (189-242)||(41662520-41662573)
chr8 (188-244)||(13937389-13937445)
chr8 (192-247)||(23123514-23123567)
chr8 (192-244)||(25438794-25438846)
chr8 (213-292)||(74936-75015)
chr8 (189-279)||(18020053-18020141)
chr8 (190-244)||(9822748-9822802)
chr8 (190-244)||(23123338-23123392)
chr8 (190-247)||(34313765-34313820)
chr8 (190-244)||(37397145-37397199)
chr8 (189-247)||(41662106-41662164)
chr8 (190-243)||(3463946-3463999)
chr8 (194-247)||(43162536-43162588)
chr8 (189-244)||(24473768-24473823)
chr8 (186-244)||(2856522-2856580)
chr8 (190-240)||(3307338-3307388)
chr8 (186-244)||(15444647-15444705)
chr8 (190-244)||(24473343-24473397)
chr8 (186-243)||(6198654-6198711)
chr8 (187-240)||(6199100-6199153)
chr8 (197-246)||(7127660-7127708)
chr8 (195-243)||(15156062-15156111)
chr8 (189-242)||(17431286-17431339)
chr8 (195-247)||(18019915-18019968)
chr8 (190-247)||(43162234-43162290)
chr8 (192-244)||(74688-74739)
chr8 (192-244)||(15442765-15442817)
chr8 (195-242)||(37752242-37752290)
chr8 (189-240)||(6092776-6092825)
chr8 (189-244)||(11007828-11007883)
chr8 (189-244)||(20861638-20861693)
chr8 (187-242)||(22786837-22786892)
chr8 (193-243)||(22786936-22786987)
chr8 (191-242)||(22851958-22852009)
chr8 (193-244)||(34498125-34498176)
chr8 (182-244)||(3463634-3463694)
chr8 (190-244)||(9623502-9623556)
chr8 (204-246)||(9930837-9930879)
chr8 (193-239)||(37669958-37670004)
chr8 (195-243)||(12281252-12281301)
chr8 (189-237)||(9465606-9465653)
chr8 (256-292)||(37752181-37752217)
chr8 (195-242)||(41662281-41662329)
chr8 (195-242)||(43245999-43246047)
[»] scaffold0110 (3 HSPs)
scaffold0110 (187-292)||(45758-45863)
scaffold0110 (189-247)||(45536-45593)
scaffold0110 (195-243)||(45684-45733)
[»] chr3 (59 HSPs)
chr3 (190-292)||(20968971-20969073)
chr3 (190-247)||(10293906-10293963)
chr3 (189-245)||(47871121-47871176)
chr3 (188-244)||(48159895-48159951)
chr3 (190-292)||(10293608-10293711)
chr3 (189-247)||(20968717-20968775)
chr3 (190-243)||(1927772-1927825)
chr3 (190-247)||(18875188-18875245)
chr3 (188-244)||(40848961-40849017)
chr3 (186-242)||(47665907-47665963)
chr3 (188-243)||(1101182-1101237)
chr3 (185-244)||(3644783-3644842)
chr3 (193-279)||(17372438-17372525)
chr3 (188-243)||(18874880-18874935)
chr3 (188-243)||(45060872-45060927)
chr3 (189-244)||(53687887-53687942)
chr3 (190-244)||(42672978-42673031)
chr3 (190-244)||(47666335-47666389)
chr3 (190-244)||(48160333-48160387)
chr3 (187-244)||(1928434-1928490)
chr3 (190-243)||(8314013-8314066)
chr3 (190-279)||(17372298-17372387)
chr3 (186-243)||(27238461-27238518)
chr3 (187-243)||(8315083-8315138)
chr3 (191-243)||(22429159-22429211)
chr3 (187-239)||(42455787-42455839)
chr3 (190-245)||(13657445-13657500)
chr3 (184-247)||(14015688-14015751)
chr3 (186-244)||(21895653-21895712)
chr3 (193-244)||(27238900-27238951)
chr3 (189-244)||(40848520-40848574)
chr3 (190-244)||(3353128-3353181)
chr3 (190-244)||(10348799-10348853)
chr3 (186-244)||(14015964-14016021)
chr3 (190-244)||(24485460-24485513)
chr3 (190-244)||(42673296-42673349)
chr3 (189-243)||(53766580-53766634)
chr3 (195-243)||(20968897-20968946)
chr3 (187-243)||(1100912-1100968)
chr3 (193-244)||(13657621-13657673)
chr3 (193-247)||(14015867-14015923)
chr3 (190-238)||(45060596-45060644)
chr3 (193-247)||(1101087-1101141)
chr3 (186-244)||(17372594-17372650)
chr3 (189-244)||(26007181-26007235)
chr3 (186-241)||(26007622-26007677)
chr3 (188-242)||(3353553-3353606)
chr3 (190-244)||(9027033-9027086)
chr3 (190-244)||(21896511-21896564)
chr3 (193-247)||(26540694-26540747)
chr3 (190-240)||(42627550-42627599)
chr3 (194-243)||(4947263-4947312)
chr3 (195-247)||(4947386-4947439)
chr3 (195-243)||(10293735-10293784)
chr3 (187-244)||(36180990-36181047)
chr3 (188-244)||(47870821-47870877)
chr3 (183-244)||(53766156-53766217)
chr3 (189-241)||(17441066-17441118)
chr3 (195-242)||(18875017-18875065)
[»] chr6 (38 HSPs)
chr6 (188-292)||(3403940-3404045)
chr6 (189-292)||(21031978-21032081)
chr6 (180-244)||(33828980-33829044)
chr6 (188-244)||(33829636-33829692)
chr6 (190-244)||(3403717-3403771)
chr6 (189-247)||(18241853-18241911)
chr6 (188-244)||(10039674-10039729)
chr6 (190-292)||(18242107-18242210)
chr6 (185-292)||(30388315-30388421)
chr6 (190-247)||(11656779-11656836)
chr6 (186-247)||(13579648-13579708)
chr6 (183-239)||(21032285-21032341)
chr6 (189-244)||(7654548-7654603)
chr6 (181-287)||(31598229-31598335)
chr6 (193-247)||(3825530-3825583)
chr6 (190-244)||(10087858-10087912)
chr6 (190-244)||(33974299-33974353)
chr6 (190-279)||(30388062-30388150)
chr6 (184-245)||(33655114-33655174)
chr6 (181-240)||(31598732-31598790)
chr6 (190-244)||(22684358-22684411)
chr6 (190-244)||(22754657-22754710)
chr6 (189-247)||(23250591-23250648)
chr6 (195-247)||(2762611-2762664)
chr6 (195-247)||(10039840-10039893)
chr6 (195-242)||(3403867-3403915)
chr6 (195-247)||(12714436-12714488)
chr6 (195-242)||(30388242-30388290)
chr6 (197-247)||(21032107-21032158)
chr6 (191-242)||(22755091-22755142)
chr6 (189-244)||(29074372-29074426)
chr6 (189-244)||(29079136-29079190)
chr6 (189-244)||(29106945-29106999)
chr6 (193-240)||(32734000-32734047)
chr6 (193-243)||(33658566-33658617)
chr6 (195-243)||(18242033-18242082)
chr6 (190-247)||(33971994-33972050)
chr6 (195-246)||(11656608-11656660)
[»] scaffold0802 (3 HSPs)
scaffold0802 (190-292)||(1371-1474)
scaffold0802 (190-247)||(1118-1175)
scaffold0802 (195-243)||(1297-1346)
[»] chr4 (67 HSPs)
chr4 (190-292)||(16555768-16555871)
chr4 (181-244)||(56505684-56505747)
chr4 (187-247)||(16555512-16555572)
chr4 (193-292)||(13198606-13198707)
chr4 (188-292)||(3930431-3930535)
chr4 (188-244)||(50678777-50678833)
chr4 (189-247)||(13198903-13198961)
chr4 (187-244)||(28196343-28196400)
chr4 (194-247)||(49178813-49178866)
chr4 (189-244)||(24775783-24775838)
chr4 (189-244)||(28196773-28196828)
chr4 (189-244)||(36095816-36095871)
chr4 (193-244)||(36096475-36096526)
chr4 (186-244)||(9023240-9023298)
chr4 (189-247)||(18077199-18077257)
chr4 (190-244)||(32703650-32703704)
chr4 (189-279)||(35393741-35393830)
chr4 (186-244)||(39744465-39744523)
chr4 (190-244)||(50679424-50679478)
chr4 (188-238)||(56506580-56506630)
chr4 (191-247)||(8181992-8182049)
chr4 (188-241)||(9380744-9380797)
chr4 (190-247)||(11241389-11241446)
chr4 (187-244)||(11241661-11241717)
chr4 (191-244)||(25161879-25161932)
chr4 (191-279)||(8488447-8488534)
chr4 (191-247)||(22681576-22681631)
chr4 (189-244)||(9023680-9023735)
chr4 (189-244)||(26207746-26207801)
chr4 (189-244)||(32703224-32703279)
chr4 (189-244)||(43051252-43051307)
chr4 (190-244)||(4239366-4239420)
chr4 (190-244)||(9380307-9380361)
chr4 (186-244)||(45830196-45830254)
chr4 (187-240)||(292779-292832)
chr4 (190-243)||(5206231-5206283)
chr4 (191-244)||(11529169-11529222)
chr4 (189-244)||(169012-169068)
chr4 (195-242)||(16555695-16555743)
chr4 (179-243)||(23540253-23540317)
chr4 (190-242)||(39086625-39086677)
chr4 (185-244)||(169439-169498)
chr4 (189-244)||(293217-293272)
chr4 (189-244)||(26207360-26207414)
chr4 (193-244)||(43050610-43050661)
chr4 (186-244)||(5205984-5206042)
chr4 (184-245)||(8182171-8182233)
chr4 (188-242)||(22681881-22681935)
chr4 (189-243)||(25225399-25225453)
chr4 (190-247)||(27304718-27304773)
chr4 (195-244)||(49178644-49178694)
chr4 (189-243)||(54508814-54508868)
chr4 (188-244)||(23539839-23539893)
chr4 (195-247)||(27304890-27304943)
chr4 (187-244)||(39744027-39744084)
chr4 (186-242)||(47219203-47219259)
chr4 (184-244)||(48405956-48406015)
chr4 (184-247)||(3930173-3930235)
chr4 (190-241)||(7603422-7603472)
chr4 (190-240)||(43292361-43292411)
chr4 (189-243)||(45828993-45829047)
chr4 (195-243)||(3930357-3930406)
chr4 (191-247)||(7603146-7603200)
chr4 (195-243)||(11241567-11241616)
chr4 (191-240)||(23433489-23433538)
chr4 (191-244)||(43292038-43292091)
chr4 (190-231)||(49178533-49178574)
[»] scaffold0192 (2 HSPs)
scaffold0192 (189-285)||(25327-25424)
scaffold0192 (195-242)||(25247-25295)
[»] chr5 (52 HSPs)
chr5 (188-292)||(25115755-25115860)
chr5 (188-292)||(25174847-25174952)
chr5 (190-292)||(18433015-18433118)
chr5 (189-279)||(18433281-18433371)
chr5 (186-247)||(25175148-25175209)
chr5 (186-245)||(25116060-25116119)
chr5 (186-244)||(12498563-12498621)
chr5 (186-244)||(18816948-18817006)
chr5 (190-244)||(18817611-18817665)
chr5 (187-244)||(12498928-12498985)
chr5 (185-279)||(22428929-22429021)
chr5 (187-244)||(26571164-26571221)
chr5 (186-246)||(5187828-5187888)
chr5 (189-292)||(26020449-26020553)
chr5 (193-301)||(34576870-34576977)
chr5 (186-240)||(16466746-16466800)
chr5 (187-244)||(22429196-22429252)
chr5 (188-244)||(11351427-11351483)
chr5 (196-247)||(16726084-16726135)
chr5 (189-244)||(19514963-19515018)
chr5 (193-244)||(21207229-21207280)
chr5 (188-247)||(33324835-33324894)
chr5 (188-242)||(31569905-31569958)
chr5 (191-244)||(22729440-22729492)
chr5 (190-243)||(23011079-23011131)
chr5 (187-244)||(26570726-26570783)
chr5 (190-279)||(34577129-34577217)
chr5 (186-242)||(43464194-43464249)
chr5 (193-244)||(3888662-3888713)
chr5 (189-244)||(11350807-11350861)
chr5 (189-244)||(37610201-37610255)
chr5 (189-244)||(37780319-37780373)
chr5 (189-244)||(41383167-41383221)
chr5 (193-244)||(43463759-43463809)
chr5 (190-244)||(3888239-3888293)
chr5 (195-243)||(25115885-25115934)
chr5 (195-243)||(25174977-25175026)
chr5 (189-242)||(34147512-34147565)
chr5 (193-241)||(34576991-34577040)
chr5 (193-244)||(9665560-9665609)
chr5 (195-242)||(18433143-18433191)
chr5 (190-242)||(37780744-37780796)
chr5 (187-243)||(41382890-41382945)
chr5 (193-240)||(2817152-2817199)
chr5 (193-247)||(9869735-9869790)
chr5 (190-236)||(12441320-12441364)
chr5 (190-244)||(19514525-19514580)
chr5 (193-243)||(23011383-23011432)
chr5 (190-243)||(9665828-9665879)
chr5 (188-244)||(10098941-10098996)
chr5 (193-240)||(23011261-23011309)
chr5 (189-244)||(34147140-34147193)
[»] scaffold0319 (3 HSPs)
scaffold0319 (190-292)||(6648-6750)
scaffold0319 (189-247)||(6393-6451)
scaffold0319 (195-242)||(6575-6623)
[»] scaffold0001 (5 HSPs)
scaffold0001 (185-247)||(438925-438987)
scaffold0001 (188-247)||(439196-439255)
scaffold0001 (189-247)||(183660-183717)
scaffold0001 (193-243)||(183367-183416)
scaffold0001 (193-240)||(183544-183592)
[»] scaffold0002 (1 HSPs)
scaffold0002 (180-292)||(411911-412024)
[»] scaffold0328 (2 HSPs)
scaffold0328 (190-244)||(6795-6849)
scaffold0328 (190-244)||(6152-6206)
[»] scaffold0176 (2 HSPs)
scaffold0176 (183-244)||(20043-20104)
scaffold0176 (189-244)||(19620-19674)
[»] scaffold0535 (1 HSPs)
scaffold0535 (189-240)||(10011-10062)
[»] scaffold0069 (1 HSPs)
scaffold0069 (190-245)||(50506-50560)
[»] scaffold0041 (1 HSPs)
scaffold0041 (189-244)||(38695-38750)
[»] scaffold0017 (1 HSPs)
scaffold0017 (190-244)||(185274-185328)
[»] scaffold0009 (1 HSPs)
scaffold0009 (189-247)||(205686-205743)
[»] scaffold0376 (2 HSPs)
scaffold0376 (190-247)||(7597-7653)
scaffold0376 (189-244)||(7454-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (190-247)||(17153-17209)
scaffold0015 (190-247)||(16853-16908)
[»] scaffold1221 (2 HSPs)
scaffold1221 (184-244)||(1505-1564)
scaffold1221 (193-247)||(1781-1834)
[»] scaffold0035 (1 HSPs)
scaffold0035 (191-247)||(72967-73023)
[»] scaffold0029 (2 HSPs)
scaffold0029 (189-245)||(9904-9960)
scaffold0029 (187-243)||(10320-10374)
[»] scaffold0460 (2 HSPs)
scaffold0460 (189-240)||(329-380)
scaffold0460 (190-244)||(763-816)
[»] scaffold0598 (2 HSPs)
scaffold0598 (191-243)||(6877-6927)
scaffold0598 (192-242)||(6609-6659)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 15884593 - 15884405
Alignment:
Q  1 tttcttgagattcttccttattttcaatgctacaagcatgaagaggaaaaaggatagtaaggcaaatattttggaatccatggagaaaggtgtattataa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15884593 tttcttgagattcttccttattttcagtgctacaagcatgaagaggaaaaaggatagtaaggcaaatattttggaatccatggagaaaggtgtagtataa 15884494  T
Q  101 atgtcaaggttcacaaagataaaacgaaatagaagtatttgagattacatgagatgtggaaaaaccaactaaatgtgtattataattta 189  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15884493 atgtcaaggttcacaaagataaaacgaaatagaaggatttgagattacatgagatgtggaaaaaccaactaaatgtgtattataattta 15884405  T

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Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 47955305 - 47955409
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||    
T  47955305 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 47955404  T
Q  288 ctctg 292  Q
     ||||    
T  47955405 ttctg 47955409  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 17518653 - 17518555
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctctct 291  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||||| |||    
T  17518653 cttaattgcacttttccccct-atcttttgccaattgtgcgattttgcaccccctcttttttttgagcaattttgca-cccatctttttgccccctttct 17518556  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 8109048 - 8108993
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8109048 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 41082909 - 41083011
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctct 289  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||         ||| ||||||||||||||||||||||||||| |    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctctttttttttagcgattttgcaccccatctttttgcccccttt 41083008  T
Q  290 ctg 292  Q
    |||    
T  41083009 ctg 41083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 48105177 - 48105116
Alignment:
Q  183 taatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  48105177 taattttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

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Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 44911019 - 44911079
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  44911019 aatttaggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 28633711 - 28633774
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  28633711 tataatataggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 49284408 - 49284463
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  49284408 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 13589713 - 13589656
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  13589713 aggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 48190771 - 48190825
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

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Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 9347116 - 9347180
Alignment:
Q  180 ttataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||| ||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  9347116 ttatatttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 32163099 - 32163043
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  32163099 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 48191411 - 48191355
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  48191411 taggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 39692055 - 39692000
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  39692055 aggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 47955664 - 47955605
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||    
T  47955664 taggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 17518299 - 17518359
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  17518299 tttaggcttaattgcacctttcccc-ttatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 42611188 - 42611237
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 31847898 - 31847997
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctctctg 292  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||| ||| |         |||| ||||||||||| ||||||||||||||| ||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatattttttttgagcgattttgcacccgatctttttgccccctttctg 31847997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 31848248 - 31848189
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||| ||| |||||||||  |||||| |||||||||||||||||    
T  31848248 taggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc 31848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 41083266 - 41083208
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||    
T  41083266 taggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 6002237 - 6002291
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 8108719 - 8108777
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    |||| |||||||||||||||| || |||||||||  |||||||||||||||||||||||    
T  8108719 taggtttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct 8108777  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 19008808 - 19008750
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||    
T  19008808 tttaggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacccc 19008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 22149402 - 22149490
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  22149402 aggcttaattgcacttttccccc-tatc-tttggtaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 22149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 27172116 - 27172169
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  20480665 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 26815175 - 26815119
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||    
T  26815175 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 26815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 28634213 - 28634157
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  28634213 taggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 28634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 39690791 - 39690847
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||| |||||||||| |||| ||| ||| |||||||||||||||||||||||    
T  39690791 ttaggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 1177079 - 1177016
Alignment:
Q  183 taatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    |||| |||| |||||||||||||||| || ||||||| || |||||||| ||||||||||||||    
T  1177079 taatctaggtttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 4692488 - 4692433
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |||| |||  |||||||||||||| ||||||||||||    
T  4692488 aggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||| || |||  |||||||||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 20480167 - 20480221
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  20480167 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 27172596 - 27172545
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  27172596 aggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgca 27172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 48104681 - 48104732
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcacccc 48104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 48313847 - 48313792
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||| |||||| ||| ||||||||||| |||||||| ||||||||||||    
T  48313847 aggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 50615679 - 50615621
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50615679 attttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 50623507 - 50623449
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50623507 attttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 6703948 - 6703894
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| |||  |||||||||||||| ||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12611460 - 12611510
Alignment:
Q  5 ttgagattcttccttattttcaatgctacaagcatgaagaggaaaaaggat 55  Q
    ||||||||||||| |||||||| ||| ||||| ||||||||||||||||||    
T  12611460 ttgagattcttccctattttcagtgcaacaagtatgaagaggaaaaaggat 12611510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 13918446 - 13918500
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| || | |||  |||||||||||||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  193 ttaattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 26814694 - 26814748
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 50615239 - 50615289
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  50615239 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 50623067 - 50623117
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    ||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  50623067 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 6703451 - 6703512
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||| ||||||||||||||||||||| || | |||  ||| |||||||||||||||||||||    
T  6703451 tatattttaggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacc 6703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 50429655 - 50429708
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||| |||||||||| ||||  ||||| |||||||||||||||||||    
T  50429655 aggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 999580 - 999529
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||||||||| |||   ||||||||||||||||||||||    
T  999580 taggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||  || ||||||||  ||||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 9347606 - 9347551
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |||||| ||  |||||||||||||| ||||||||||||    
T  9347606 taggcttaattgcactttcccccct-atagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 44911493 - 44911438
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||| ||||||||| |||| |||| |||  ||||||||||||||||||||||||||    
T  44911493 taggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccc 44911438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 46824333 - 46824278
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| || | |||  |||||||||||||| ||||||||||||    
T  46824333 aggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcacccc 46824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 244
Target Start/End: Complemental strand, 49285086 - 49285055
Alignment:
Q  213 tatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcacccc 49285055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||| |||||| || |||||| |||||||||||||||||    
T  1176717 ggcttaattgcactttcccccct-atattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 19007734 - 19007783
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||||||||||    
T  19007734 aggcttaattgcactttcccccct-atagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||| ||||||||  ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 49317752 - 49317801
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||||||| |||  |||||||||||||| ||||||||    
T  49317752 ggcttaattgcacttttccccc-tatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 49318219 - 49318170
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||| |||||| ||  |||||||||||||||||||||||    
T  49318219 ggcttaattgcactttcccccct-atagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 15881630 - 15881578
Alignment:
Q  140 tgagattacatgagatgtgga-aaaaccaacta--aatgtgtattataattta 189  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||||||||||    
T  15881630 tgagattacatgagatggggataaaaccaactagtaatgtgtattataattta 15881578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 42611665 - 42611616
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||| ||| |||  |||| ||||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacc 42611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 47955434 - 47955483
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  47955434 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 47955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 999098 - 999161
Alignment:
Q  176 tgtattataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||  || ||| ||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  999098 tgtattatttttaaggtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||||||    
T  21687520 ggcttaatagcacttttccccct-ataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgca 240  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||| ||||  |||||||||| |||| ||||||||||||||    
T  46056904 gcttaattgcactttccccc--tatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 50949621 - 50949569
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||| |||||||||||| ||||| |||  |||| ||||||||||||||||||    
T  50949621 taggcataattgcactttccccccctatagtttgtcaattgtgcgattttgca 50949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 9e-30; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 3687710 - 3687608
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctct 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||| |    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttttgcccccttt 3687611  T
Q  290 ctg 292  Q
    |||    
T  3687610 ctg 3687608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 9412383 - 9412281
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccc 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||||||||    
T  9412383 tttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccc 9412284  T
Q  285 cct 287  Q
    |||    
T  9412283 cct 9412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 9412022 - 9412080
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9412022 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 44600195 - 44600135
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  44600195 aattaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 13863309 - 13863367
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  13863309 tttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 44599489 - 44599543
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 13772955 - 13772898
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 8643826 - 8643766
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||    
T  8643826 aatttaggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 10533032 - 10533088
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 37889315 - 37889259
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  37889315 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 9034863 - 9034922
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||    
T  9034863 tttaggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 37888824 - 37888887
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  37888824 tatatttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 37972451 - 37972396
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  37972451 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 20418884 - 20418942
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  20418884 tttaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 13772638 - 13772695
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||    
T  13772638 ttaggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 16199037 - 16198977
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  16199037 aattaaggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcacccc 16198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 23686775 - 23686723
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  23686775 tttaggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 46816371 - 46816311
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||| |||||| ||||||||||||||||    
T  46816371 aatttaggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 3205148 - 3205093
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  3205148 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 13864011 - 13863964
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattt 236  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13864011 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 17156966 - 17157021
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  17156966 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 20419379 - 20419324
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  20419379 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 22740155 - 22740210
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  22740155 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 29292921 - 29292972
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  29292921 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 3687353 - 3687411
Alignment:
Q  190 ggcttaattgcacttttccccct-tatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 6908209 - 6908265
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  6908209 tttaggcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 37971957 - 37972014
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| ||| | |  |||||||||||||||||||||||||||    
T  37971957 ttaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| ||||||||  |||||||| |||||||||||||||    
T  8953941 gcttaattgcacttttccccct-atcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 29293405 - 29293349
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    |||| |||||||||||| ||||||||| |||  ||||||||||||||||||||||||    
T  29293405 attttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 13744287 - 13744233
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  13744287 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 18863970 - 18864021
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 30857959 - 30857904
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||  | ||||||||||| ||||||||| ||||||||||||    
T  30857959 aggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacccc 30857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    ||||||||||||||||| ||| ||||||| || ||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 13741557 - 13741611
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| ||||||||| |||  ||| |||||||||||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcacccc 13741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 18864457 - 18864404
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| |||||||||||| ||  |||||||||||||||||||||||||    
T  18864457 taggcttaattgtacttttccccct-atagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  27181911 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 39983700 - 39983754
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    ||||||||||||||||||||||||||||||   |||| |||||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcaccccc 39983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 23686421 - 23686473
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  23686421 ggcttaattgcacttttccccc-tatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttccccc-tatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 38826968 - 38826915
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||| ||||||||| |||  |||| ||||||||||||||||||||    
T  38826968 aggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacc 38826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 42419084 - 42419028
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||| |||||||||||||||||||| ||  ||||||||||||||| ||||||||||||    
T  42419084 taggtttaattgcacttttccccct-atagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||  || |||||||||| |||||||| ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 33628716 - 33628660
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| |||||||||||| |||  |||||||| | |||||||||||||||||||||    
T  33628716 taggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 3204669 - 3204721
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| ||||  |||  |||||||||||||||||||||||||||    
T  3204669 ggcttaattgcactttccccc--tatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 18925280 - 18925229
Alignment:
Q  194 taattgcacttttcccccttatctttt-gccaattgtgcgattttgcacccc 244  Q
    |||||| |||||| |||| |||||||| ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||||    
T  22740641 ttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 27096168 - 27096223
Alignment:
Q  193 ttaattgcacttttcccccttatcttttg-ccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||||| ||||||    
T  27096168 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 27182135 - 27182080
Alignment:
Q  193 ttaattgcacttttcccccttatcttttg-ccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||||| ||||||    
T  27182135 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27182080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 29291808 - 29291863
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||| | || |||||||||  |||| |||||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctc 29291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 33628397 - 33628451
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||| || ||||||||||| |||||||| |||||||| ||||||    
T  33628397 cttaattgcacttttctcc-ttatcttttgctaattgtgcaattttgcatcccctc 33628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 38191265 - 38191312
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||||||    
T  38191265 ttaattgcacttttcctctttatcttttgctaattatgcgattttgca 38191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||| |||||| || |||||| ||||||||||||||||||||    
T  6908534 ttaattgcactttcccccct-attttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |  ||| |||||| |||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 38191387 - 38191440
Alignment:
Q  194 taattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  38191387 taattgcactttttcccct-atctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 9412251 - 9412202
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||||||    
T  9412251 aattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 9412202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 29292095 - 29292038
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||  ||  || ||||||| |||||||||||||| |||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctc 29292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 34235737 - 34235778
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtg 230  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  34235737 aggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 34236030 - 34235977
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||||||| | |||||||   |||||||||| ||||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 42418590 - 42418639
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||||| |||||||||||| |||  ||||| |||||||||||||||    
T  42418590 aggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 5349784 - 5349733
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| |||   |||||||||  |||||||||||||||||||||    
T  5349784 ggcttaattgcactttcccc---tatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 13772841 - 13772793
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  13772841 aattacacttttgccccttatctttttgctaattgtgcgattttgcacc 13772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 15567327 - 15567276
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||| ||||||||||||||||||| ||||||||||   | |||||||||||||||    
T  15567327 taggtttaattgcacttttcccccctatcttttgc---tagtgcgattttgcacc 15567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||||||||||| |||||| || |||||| |||||||||||||||    
T  27096047 ggcttaattgcactttcccccct-atattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||||||||||| |||||| || |||||| |||||||||||||||    
T  27182256 ggcttaattgcactttcccccct-atattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 35080259 - 35080223
Alignment:
Q  208 ccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||  |||||||||||||||||||||    
T  35080259 ccccttatcttttgttaattgtgcgattttgcacccc 35080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 30190921 - 30191026
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccc 286  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||||||||||    
T  30190921 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 30191020  T
Q  287 tctctg 292  Q
    | ||||    
T  30191021 tttctg 30191026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 6171511 - 6171408
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||           ||||||||||||||||||||||||||||||||     
T  6171511 aggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccctctttttttttgagcaattttgcaccccatctttttgccccctt 6171412  T
Q  289 tctg 292  Q
    ||||    
T  6171411 tctg 6171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 11883622 - 11883721
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||    
T  11883622 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgccccct 11883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 20347532 - 20347461
Alignment:
Q  176 tgtattataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20347532 tgtaatataataaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 20347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 24832330 - 24832429
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||         |||| |||||||||||||||||||||||||||    
T  24832330 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccct 24832429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 11883985 - 11883923
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  11883985 attttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 26841583 - 26841641
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  26841583 tttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 2639538 - 2639482
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  2639538 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 40469780 - 40469680
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctctct 291  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||         |||| ||||||||||||||||||||||||||| |||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 40469681  T
Q  292 g 292  Q
    |    
T  40469680 g 40469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 18296748 - 18296693
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18296748 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 5378657 - 5378715
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  5378657 tttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 41790970 - 41790912
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  41790970 tttaggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 2638819 - 2638874
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  2638819 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 37720203 - 37720258
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  37720203 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 15920781 - 15920867
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    |||||| |||||||||| | |||||||||  ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcaattttgcaccccatctttt 15920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 17850978 - 17851032
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 30191279 - 30191222
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 32673193 - 32673141
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  32673193 ttaattgcactttttcccct-atcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 5380015 - 5379959
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||    
T  5380015 taggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 8851151 - 8851202
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 8851637 - 8851582
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  8851637 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 26737481 - 26737537
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||    
T  26737481 aggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 6325399 - 6325349
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 16910827 - 16910881
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 26737835 - 26737781
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 6495776 - 6495723
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||| || |||||||||  |||||||||||||||||||    
T  6495776 aggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 40469427 - 40469484
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||| | ||||||| | |||||||||| ||||||||||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 43495658 - 43495562
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    |||||||||||||||| || ||| || |||||| ||||||||||||||||| ||||||        |||| |||||||||||||||||||||| ||||    
T  43495658 ggcttaattgcactttcccacct-atattttgctaattgtgcgattttgcatcccctcttttttttgagcgattttgcaccccatctttttgcgccct 43495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  6171156 ggcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 7664246 - 7664302
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||    
T  7664246 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 7664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 17346091 - 17346032
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||| ||||    
T  17346091 ttaggcttaattgcactttttcct-ttatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||||||||||||    
T  18055050 cttaattgcacttttcccccta--cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 20347161 - 20347217
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||| |||||||||||  |||||||||  |||||||||||||||||||||    
T  20347161 taggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 29230278 - 29230334
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||||||| |  ||||||||| |||||||| |||||||||||    
T  29230278 tttaggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 5793450 - 5793497
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgca 5793497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  43495535 ttaattgcacttttccccct-atctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 7664727 - 7664673
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 43495308 - 43495366
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||| | ||| |||||| |||||||||||||| || ||||||    
T  43495308 aggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 32672842 - 32672895
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||   ||||||||||||  ||||||||||||||||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 16911328 - 16911269
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| |||||||||||||||  ||||| ||  |||||||||||||||||||||||||||    
T  16911328 aatttaagcttaattgcactttcgcccct-atagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  40221313 ggcttaattgcacctttccccct-atcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 6324924 - 6324967
Alignment:
Q  197 ttgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||| |||  |||||||||||||||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgca 6324967  T

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Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 7979563 - 7979619
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||| ||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  7979563 tttaggctttattgcacttttccc--ttatagtttgacaattgtgcgattttgcacccc 7979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcaccccctc 17345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 18055169 - 18055224
Alignment:
Q  193 ttaattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| | || |||  |||||||||||||||||||||||||||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctc 18055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 18055367 - 18055316
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||| |||  || |||||| ||||||||||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcacccc 18055316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 18750184 - 18750126
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||| |||||||||||||| ||||||| ||  |||| ||||||||||||||||||||||    
T  18750184 atttaagcttaattgcacttctccccct-atagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 7591904 - 7591850
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||  |||| | | ||||||||| ||||||||||||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 15321515 - 15321565
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||  ||| |||||||| |||| |||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 6171383 - 6171334
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  6171383 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 6171334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 15321388 - 15321446
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    ||||| |||||||||||||||||||  |||||||||  |||||||| |||||||| |||||    
T  15321388 tttagacttaattgcacttttcccc--tatcttttgttaattgtgcaattttgcatcccct 15321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 20347390 - 20347341
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  20347390 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 20347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||| |  ||||||||| |||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 30191051 - 30191100
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  30191051 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 30191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||| || |||| ||||  ||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 19141446 - 19141497
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||| |||| |||  |||||||||||||| ||||||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcacccc 19141497  T

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Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 41662457 - 41662354
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 41662358  T
Q  289 tctg 292  Q
    ||||    
T  41662357 tctg 41662354  T

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Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 765736 - 765832
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 287
Target Start/End: Original strand, 12281123 - 12281222
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||         |||| |||||||||||||||||||||||||||    
T  12281123 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgccccct 12281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 16928937 - 16929043
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccc 284  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||        ||||  |||||||||||||||||||||||    
T  16928937 atttaggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctcttttttttgagc-gttttgcaccccatctttttgccc 16929035  T
Q  285 cctctctg 292  Q
    ||| ||||    
T  16929036 cctttctg 16929043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 15156239 - 15156136
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||     
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctt 15156140  T
Q  289 tctg 292  Q
    ||||    
T  15156139 tctg 15156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 13026629 - 13026687
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13026629 aatttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 12281480 - 12281423
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 37752478 - 37752413
Alignment:
Q  182 ataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  37752478 ataattttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 15155880 - 15155940
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  15155880 ttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 9823416 - 9823361
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  9823416 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 43245871 - 43245974
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    ||||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 43245970  T
Q  289 tctg 292  Q
    ||||    
T  43245971 tctg 43245974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 39724102 - 39724048
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 43246231 - 43246173
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  43246231 aggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 15042141 - 15042198
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  15042141 tttaggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 16929296 - 16929239
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 13936713 - 13936776
Alignment:
Q  180 ttataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  13936713 ttataatgaaggcttaattgcacttttccccct-atcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 34498614 - 34498555
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  34498614 atttaggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 22851390 - 22851444
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 37396705 - 37396762
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||||||||||||||    
T  37396705 ttaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 41662520 - 41662573
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  41662520 aggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 13937445 - 13937389
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  13937445 taggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 23123567 - 23123514
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  23123567 cttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 75015 - 74936
Alignment:
Q  213 tatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctctctg 292  Q
    |||||||||| ||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||| ||||    
T  75015 tatcttttgctaattgtgcgattttgcaccccctctttttttttagcgattttgcaccccatctttttgccccctttctg 74936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 18020141 - 18020053
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    |||||||||||||||||| |||  |||||||||  ||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  18020141 aggcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 18020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9822748 - 9822802
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 34313765 - 34313820
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  34313765 ggcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctc 34313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 37397199 - 37397145
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 41662106 - 41662164
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| ||| |||| |||||||||  ||||||||||||||||||||||||    
T  41662106 aggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  194 taattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  43162588 taattgcacttttccccct-atcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 24473823 - 24473768
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||  || |||  |||||||||||||||||||||||||||    
T  24473823 aggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 2856522 - 2856580
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||| | |||||| || |||  |||||||||||||||||||||||||||    
T  2856522 tttaggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcacccc 2856580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 15444705 - 15444647
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| |||||||||||||| |||| |||  ||| |||||||||||||||||||||||    
T  15444705 tttaggtttaattgcactttttccccctataatttaccaattgtgcgattttgcacccc 15444647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 24473343 - 24473397
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| |||| |||  ||||||||||||| |||||||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 6198654 - 6198711
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  6198654 tttaggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccc 6198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 6199153 - 6199100
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||||||  || |||  |||||||||||||||||||||||    
T  6199153 ttaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgca 6199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  197 ttgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  7127660 ttgcacttttccccct-atcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 17431286 - 17431339
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||| ||||    
T  17431286 aggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacc 17431339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  195 aattgcacttttcccccttatcttttgcc-aattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||    
T  43162234 ggcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |  ||||||||| |||||||||||||||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 15442765 - 15442817
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||| ||||||||| ||| ||| |||||||||| |||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcacccc 15442817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 6092776 - 6092825
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  6092776 aggcttaattgca-ttttccccct-atcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 11007883 - 11007828
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| ||  |||||||||| ||||||||| |||||||| ||||    
T  11007883 aggcttaattgcactttcccttcttatcttttaccaattgtgagattttgctcccc 11007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 20861693 - 20861638
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| |||| |||| |||  | |||||||||||||||||||||||||    
T  20861693 aggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcacccc 20861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 22786837 - 22786892
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||| |||||||||||||| |||| |||||||| | ||||||| |||||||||||    
T  22786837 ttaggtttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 22786936 - 22786987
Alignment:
Q  193 ttaattgcacttttcccccttatct-tttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||||||||    
T  22786936 ttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccc 22786987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||| | |||||  || ||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 34498125 - 34498176
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 34498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 3463634 - 3463694
Alignment:
Q  182 ataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| || |||||||||| ||||||||  |||||||| ||||||||||||    
T  3463634 ataatttaggcttaattaca-ttttccccct-atcttttgttaattgtgcaattttgcacccc 3463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9623502 - 9623556
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| | |  |||  |||||||||||||||||||||||||||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcacccc 9623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 9930879 - 9930837
Alignment:
Q  204 tttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    ||||||||||||||||||  |||||||||||||||||| ||||    
T  9930879 tttcccccttatcttttgttaattgtgcgattttgcactccct 9930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 37669958 - 37670004
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||    
T  37669958 ttaattgcacttttcctccttatcttttgttaattgtgcaattttgc 37670004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 12281252 - 12281301
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||||||    
T  12281252 aattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 12281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 9465606 - 9465653
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgatttt 237  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||    
T  9465606 aggcttaattgcacttttcctcc-tatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 37752181 - 37752217
Alignment:
Q  256 gagcaattttgcaccccatctttttgccccctctctg 292  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  37752181 gagcgattttgcaccccatctttttgccccctttctg 37752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 41662329 - 41662281
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||| |||||| |||||||||||||| ||||    
T  41662329 aattgcacttttgccccttatctttttgctaattgtgcgattttacacc 41662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 43245999 - 43246047
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  43245999 aattacacttttgccccttatctttttgctaattgtgcgattttgcacc 43246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 45863 - 45758
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgcccc 285  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||    
T  45863 ttaggcttaattgcacttttccccct-atcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 45765  T
Q  286 ctctctg 292  Q
    || ||||    
T  45764 ctttctg 45758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 45536 - 45593
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  45536 aggcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 45733 - 45684
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  45733 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 45684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 20969073 - 20968971
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctct 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |         |||| ||||||||||||||||||||||||||| |    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccctttttttttttgagcgattttgcaccccatctttttgcccccttt 20968974  T
Q  290 ctg 292  Q
    |||    
T  20968973 ctg 20968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 10293963 - 10293906
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 47871176 - 47871121
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  47871176 aggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 48159895 - 48159951
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  48159895 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 10293608 - 10293711
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    |||||||||||| ||||  ||| ||||||||| |||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 10293707  T
Q  289 tctg 292  Q
    ||||    
T  10293708 tctg 10293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 20968717 - 20968775
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||    
T  20968717 aggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 18875245 - 18875188
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctc 18875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 40849017 - 40848961
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  40849017 taggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 47665907 - 47665963
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    ||||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  47665907 tttaggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 1101237 - 1101182
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  1101237 taggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 3644842 - 3644783
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||| ||||||||||||| |||||  |||||||||||||||||||||    
T  3644842 attttggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 279
Target Start/End: Complemental strand, 17372525 - 17372438
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||| |||||||| | || |||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  17372525 ttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctcttttttttgagcaattttgcaccccatctttt 17372438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 18874880 - 18874935
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  18874880 taggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 45060927 - 45060872
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||    
T  45060927 taggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 53687887 - 53687942
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  53687887 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||| ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 48160387 - 48160333
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| ||||| |||  |||||||||||||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 1928490 - 1928434
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  1928490 ttaggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 17372298 - 17372387
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||| ||| |||| ||| |||||| |||||||||||||||||||||||         |||| |||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttttttgagcgattttgcaccccatctttt 17372387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 27238461 - 27238518
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||| ||||||||| | |||  ||||||||||||||||||||||||||    
T  27238461 tttaggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 8315138 - 8315083
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||    
T  8315138 ttaggcttaattgcactttcccccct-atattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 42455787 - 42455839
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    ||||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  42455787 ttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 13657445 - 13657500
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    ||||||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcaccccc 13657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 14015688 - 14015751
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||| ||||||||||||||  || |||||||||| |||| ||||||||||||||| ||||    
T  14015688 aatttaggtttaattgcacttttttcctttatcttttgtcaatcgtgcgattttgcacctcctc 14015751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 21895653 - 21895712
Alignment:
Q  186 tttaggcttaattgcacttttccccct-tatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||| |||||||||||||    
T  21895653 tttaggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 40848520 - 40848574
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  40848520 aggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 10348853 - 10348799
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| || | |||  |||||||||||||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcacccc 10348799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 14016021 - 14015964
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| |||||||||||||||  ||| ||||||||| |||||||||||||||||||||    
T  14016021 tttaggtttaattgcacttttcatcct-atcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 24485513 - 24485460
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  24485513 ggcttaattgcacttttctccct-atagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 42673349 - 42673296
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||    
T  42673349 ggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 53766634 - 53766580
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||||||||||| |||  ||||| |||||||| |||||||||||    
T  53766634 aggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 1100912 - 1100968
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||| ||||||||||||| ||| || |||||||||| |||||||||||||| |||||    
T  1100912 ttagacttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 14015923 - 14015867
Alignment:
Q  193 ttaattgcactttt-cccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccct-atctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 17372650 - 17372594
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||||||||  ||| |||| | |||||||||||||||||||||    
T  17372650 tttaagcttaattgcacttttcccc--tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 26007181 - 26007235
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||||||| |||  |||| ||||||||||||||||||||||    
T  26007181 aggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 26007677 - 26007622
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    |||||| |||||||||||||| |||| |||  |||||||||||| |||||||||||    
T  26007677 tttaggtttaattgcactttttccccctatagtttgccaattgtacgattttgcac 26007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 3353606 - 3353553
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||| ||| |||||||||||||||| ||  |||||||||||||||||||||||||    
T  3353606 taggtttagttgcacttttccccct-atagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  9027086 ggcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||| ||||| || ||||| ||||||||||||||||||||||    
T  21896564 ggcttaattgcattttttcccct-atattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| ||||| || ||||| ||||||||| |||||||||||||||    
T  26540694 ttaattgcacttttgcccct-attttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  42627599 ggcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  194 taattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||| ||| ||| |||||  ||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 4947386 - 4947439
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||  |||||||| ||||||||||||||||||||| |||||    
T  4947386 aattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 10293735 - 10293784
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  10293735 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 10293784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 36181047 - 36180990
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| || |||  ||||  ||||||||||||||| |||||    
T  36181047 ttaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 47870821 - 47870877
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcg-attttgcacccc 244  Q
    ||||||||||||||||||| |||| |||||||||| |||| |||| ||||||||||||    
T  47870821 taggcttaattgcactttttcccc-tatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 53766156 - 53766217
Alignment:
Q  183 taatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| || |||||||||||||| || | |||  |||| ||||||||||||||||||||||    
T  53766156 taattttggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcacccc 53766217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 17441118 - 17441066
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    ||||||||||||| |||||| |  |||||||||  ||||||||||||||||||    
T  17441118 aggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 292
Target Start/End: Complemental strand, 3404045 - 3403940
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccc 286  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||         |||| ||||||||||||||||||||||||||    
T  3404045 taggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 3403946  T
Q  287 tctctg 292  Q
    | ||||    
T  3403945 tttctg 3403940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 21031978 - 21032081
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||    
T  21031978 aggcttaattgcacttttccccctaa-cttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 21032076  T
Q  288 ctctg 292  Q
     ||||    
T  21032077 ttctg 21032081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 33828980 - 33829044
Alignment:
Q  180 ttataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  33828980 ttatatttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 33829692 - 33829636
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  33829692 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 18241853 - 18241911
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  18241853 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 10039674 - 10039729
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  10039674 taggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 18242210 - 18242107
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 18242111  T
Q  289 tctg 292  Q
    ||||    
T  18242110 tctg 18242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 30388421 - 30388315
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccc 284  Q
    ||||||| ||||||| |||||| |||| |||||||||| |||||||||||||||||||||||         |||| |||||||||||||||||||| |||    
T  30388421 atttaggtttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct-ttttttttgagcgattttgcaccccatctttttaccc 30388323  T
Q  285 cctctctg 292  Q
    ||| ||||    
T  30388322 cctttctg 30388315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 11656836 - 11656779
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctc 11656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 13579708 - 13579648
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||||    
T  13579708 tttaggcttaattgcacttttctccct-atcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 21032341 - 21032285
Alignment:
Q  183 taatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgc 239  Q
    |||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  21032341 taatctaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 7654603 - 7654548
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  7654603 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 31598335 - 31598229
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc-cctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||| ||||||||||| | ||||||| || ||||||||| ||||||||||||||||||||  ||         ||||||||||||||||||||||||    
T  31598335 tataattaaggcttaattgtatttttccctct-atcttttgctaattgtgcgattttgcacccttcttttttttttgagcaattttgcaccccatctttt 31598237  T
Q  280 tgccccct 287  Q
    ||||||||    
T  31598236 tgccccct 31598229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccct-atattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 33974353 - 33974299
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 30388062 - 30388150
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||| || |||        |||| |||||||||||||||||||    
T  30388062 ggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcagcctctcttttttttgagcgattttgcaccccatctttt 30388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 33655174 - 33655114
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||| |||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||    
T  33655174 aattaaggcttaattgcacttgtcccc-ttatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 31598790 - 31598732
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||| ||| ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  31598790 tataattaaggtttaattgcacttttccccc-tatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 22684411 - 22684358
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  22684411 ggcttaattgcacttttcccc-ttatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 22754657 - 22754710
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  22754657 ggcttaattgcacttttcccc-ttatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 23250591 - 23250648
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||| ||||| |||||||| |||||||| ||| ||||||||||||    
T  23250591 aggcttaattgcactttttcccct-atcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  195 aattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| |||||||||  ||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  197 ttgcacttttcccccttatctt-ttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22755142 - 22755091
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||| ||||  |||| ||||| ||||||||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcacc 22755091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 29074426 - 29074372
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||| |||||| ||  |||||||||||||||||||||||||||    
T  29074426 aggcttaattgctctttcccccct-atagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 29079190 - 29079136
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||| |||||| ||  |||||||||||||||||||||||||||    
T  29079190 aggcttaattgctctttcccccct-atagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 29106999 - 29106945
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||| |||||| ||  |||||||||||||||||||||||||||    
T  29106999 aggcttaattgctctttcccccct-atagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 32734047 - 32734000
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||| || |||  |||||||||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 32734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 33658566 - 33658617
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||||| ||| ||||||||| ||||||||||| |||||||||||    
T  33658566 ttaattgcacttttgccctttatctttttgccaattgtgcaattttgcaccc 33658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 18242082 - 18242033
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  18242082 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 18242033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 33971994 - 33972050
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| ||||| ||||||||  |||||| |||||||||||||||||    
T  33971994 ggcttaattgcagtttttcccct-atcttttgttaattgtacgattttgcaccccctc 33972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccccct 246  Q
    |||||||||||| |||| |||| |||||  |||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 1474 - 1371
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 1375  T
Q  289 tctg 292  Q
    ||||    
T  1374 tctg 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 16555871 - 16555768
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||         |||| |||||||||||||||||||||||||||     
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 16555772  T
Q  289 tctg 292  Q
    ||||    
T  16555771 tctg 16555768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 56505684 - 56505747
Alignment:
Q  181 tataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  56505684 tataatataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 16555512 - 16555572
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16555512 ttaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 13198606 - 13198707
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc--nnnnnnnngagcaattttgcaccccatctttttgccccctctc 290  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||||||||||| ||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttc 13198705  T
Q  291 tg 292  Q
    ||    
T  13198706 tg 13198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 292
Target Start/End: Complemental strand, 3930535 - 3930431
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccc 286  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||    
T  3930535 taggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccc 3930437  T
Q  287 tctctg 292  Q
    | ||||    
T  3930436 tttctg 3930431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 50678777 - 50678833
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  50678777 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 13198961 - 13198903
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  13198961 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 28196343 - 28196400
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  28196343 ttaggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  194 taattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 24775838 - 24775783
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  24775838 aggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 28196828 - 28196773
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  28196828 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 36095816 - 36095871
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  36095816 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 9023240 - 9023298
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  9023240 tttaggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 18077257 - 18077199
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||    
T  18077257 aggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 32703704 - 32703650
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 35393830 - 35393741
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||        |||| |||||||||||||||||||    
T  35393830 aggcttaattgcacttttcaccct-atcttttgctaattgtgcgaatttgcaccccctcttttttatgagcgattttgcaccccatctttt 35393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 39744523 - 39744465
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  39744523 tttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 56506630 - 56506580
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttg 238  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  56506630 taggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  191 gcttaattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 9380797 - 9380744
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  9380797 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 11241389 - 11241446
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 11241717 - 11241661
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  11241717 ttaggcttaattgtacttttccccct-atcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 8488534 - 8488447
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcc-ttatctttttctaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 8488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  22681576 gcttaattgcactttcccccct-atcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 9023735 - 9023680
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  9023735 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 26207801 - 26207746
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||||||| |||  |||||||||||||||||||||||||||    
T  26207801 aggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 32703224 - 32703279
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||    
T  32703224 aggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 43051307 - 43051252
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  43051307 aggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 45830254 - 45830196
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||||    
T  45830254 tttaggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 292779 - 292832
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| ||||||||    
T  292779 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgca 292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 5206283 - 5206231
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 169012 - 169068
Alignment:
Q  189 aggcttaattgcacttttc-ccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  169012 aggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 23540317 - 23540253
Alignment:
Q  179 attataatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||  |||||||||||||||||| ||| |||  |||| |||||||||||||||||||||    
T  23540317 attataattatggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 39086677 - 39086625
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 169498 - 169439
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||| ||||||||| |||  |||| ||||||||||||||||||||||    
T  169498 attttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 293272 - 293217
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  293272 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 26207360 - 26207414
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||    
T  26207360 aggcttaattgcactttcccccct-atagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 43050610 - 43050661
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||  || |||||||| |||||||||||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 5205984 - 5206042
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| || |||||||||  ||||  |||||||||||||||    
T  5205984 tttaggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 8182233 - 8182171
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccc 245  Q
    |||| ||||||||||||||||||| ||| ||| |||| || ||||||||||||||||||||||    
T  8182233 aattaaggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 22681935 - 22681881
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||| | |||||||||  |||||||| ||||||||||    
T  22681935 taggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 25225453 - 25225399
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||| |  | | |||||||||||||||||||||||||||||||    
T  25225453 aggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  27304718 ggcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 54508814 - 54508868
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||| || |  ||||||||||||||||| ||||||||||||    
T  54508814 aggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 23539839 - 23539893
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||||  |||  |||||||||||||||||||||||||||    
T  23539839 taggcttaattgcactttccccc--tatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 39744027 - 39744084
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||| |||| |||  ||| |||||||||||||||| ||||||    
T  39744027 ttaggcttaattgcactttttccccctatagtttaccaattgtgcgattttccacccc 39744084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 47219259 - 47219203
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||| ||||||||| ||||| ||  |||||||||| |||||||||||||||||||    
T  47219259 tttaggtttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 48405956 - 48406015
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||||    
T  48405956 aattaaggcttaattgcacttttccccc-tatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3930173 - 3930235
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||| ||||||||||||||||| |||| ||||||||   |||| |||||||||||||||||||    
T  3930173 aattttggcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 7603472 - 7603422
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcac 241  Q
    ||||||||||||||||| ||||| |||||||  |||||||||||||||||||    
T  7603472 ggcttaattgcactttttcccct-atctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 43292411 - 43292361
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||| ||||||||| | |  |||||||||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgca 43292361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 45828993 - 45829047
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||    
T  45828993 aggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtaccc 45829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 3930406 - 3930357
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  3930406 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 3930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 7603146 - 7603200
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||  ||||||||   |||||||| |||||||||||||||    
T  7603146 gcttaattgcacttttcccc--tatctttttttaattgtgcaattttgcaccccctc 7603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 11241616 - 11241567
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcaccc 243  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  11241616 aatttcacttttgccccttatctttttgctaattgtgcgattttgcaccc 11241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 23433538 - 23433489
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||| | || ||||||||||| ||||||||||||| ||||    
T  23433538 gcttaattgcacttctgcctcttatcttttgtcaattgtgcgattgtgca 23433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 43292038 - 43292091
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||  ||| |||  |||| ||||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcacccc 43292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 49178533 - 49178574
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgc 231  Q
    |||||||||||||||||| ||| |||||||||| ||||||||    
T  49178533 ggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 25424 - 25327
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgcccc 285  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||         |||| |||||||||||||||||||||||||    
T  25424 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 25327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 25115755 - 25115860
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc-tcnnnnnnnngagcaattttgcaccccatctttttgccccc 286  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |         |||| ||||||||||||||||||||||||||    
T  25115755 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25115854  T
Q  287 tctctg 292  Q
    | ||||    
T  25115855 tttctg 25115860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 292
Target Start/End: Original strand, 25174847 - 25174952
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc-tcnnnnnnnngagcaattttgcaccccatctttttgccccc 286  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |         |||| ||||||||||||||||||||||||||    
T  25174847 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccc 25174946  T
Q  287 tctctg 292  Q
    | ||||    
T  25174947 tttctg 25174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 18433015 - 18433118
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||         |||| |||||||||||||||||||||||||||     
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 18433114  T
Q  289 tctg 292  Q
    ||||    
T  18433115 tctg 18433118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 18433371 - 18433281
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  18433371 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 25175209 - 25175148
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  25175209 tttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 25116119 - 25116060
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  25116119 tttaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 12498563 - 12498621
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  12498563 tttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 18816948 - 18817006
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  18816948 tttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 12498985 - 12498928
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  12498985 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 22428929 - 22429021
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||        ||||||||||||||||||||||||    
T  22428929 atttaggcttaattgcactttcccccct-atcttttgctaattgtgcgattttgcaccccatc-tttttttgagcaattttgcaccccatctttt 22429021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 26571221 - 26571164
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  26571221 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 5187888 - 5187828
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccct 246  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  5187888 tttaggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 26020449 - 26020553
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccct 287  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||||||| ||         |||| |||||||||| ||||||||||||||||    
T  26020449 aggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccct 26020548  T
Q  288 ctctg 292  Q
     ||||    
T  26020549 ttctg 26020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 34576870 - 34576977
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttttgccccctctctg 292  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||| |||||| ||        |||| ||||||||||||||||||||||||||| ||||    
T  34576870 ttaattgcactttcccccct-atcttttgctaattgtgcgattttacaccccatcttttttttgagcgattttgcaccccatctttttgccccctttctg 34576968  T
Q  293 cttctccac 301  Q
     || |||||    
T  34576969 attttccac 34576977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 16466800 - 16466746
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  16466800 tttaggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 22429252 - 22429196
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  22429252 ttaggcttaattgcatttttccccct-atcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 11351483 - 11351427
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  11351483 taggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  196 attgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 19515018 - 19514963
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  19515018 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 33324894 - 33324835
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||  ||| ||||||||| |||||||| ||||||||||||||||    
T  33324894 taggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 31569905 - 31569958
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  31569905 taggtttaattgcacttttccccct-atcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccct-ataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 23011079 - 23011131
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  23011079 ggcttaattgcatttttcccc-ttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 26570726 - 26570783
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| |||||||||||| |||  |||| ||||||||||||||||||||||    
T  26570726 ttaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcacccc 26570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 34577217 - 34577129
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctttt 279  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||| ||        |||| |||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccct-atcttttgctaattgtgtgattttgcaccccatcttttttttgagcgattttgcaccccatctttt 34577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 43464249 - 43464194
Alignment:
Q  186 tttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  43464249 tttaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 3888713 - 3888662
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcacccc 3888662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 11350807 - 11350861
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||    
T  11350807 aggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 37610201 - 37610255
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37610201 aggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 37780319 - 37780373
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37780319 aggcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 41383221 - 41383167
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||| |||||||||||| || |||||| |||||||||||||||||||||    
T  41383221 aggcttaattgaacttttccccct-attttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 43463759 - 43463809
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  43463759 ttaattgcacttttcccc-ttatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 3888239 - 3888293
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| |||||||| |||  |||||||||||| ||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcacccc 3888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 34147565 - 34147512
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||||||||| |||| |||  |||| ||||||||||||||||||||    
T  34147565 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  193 ttaattgcacttttcccccttatc-ttttgccaattgtgcgattttgcac 241  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  195 aattgcacttttcccccttatc-ttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 37780796 - 37780744
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||| ||||||||||| |||  ||||| |||||||||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 41382890 - 41382945
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  41382890 ttaggtttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 2817152 - 2817199
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||| || |||  |||||||||||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 2817199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 9869790 - 9869735
Alignment:
Q  193 ttaattgcacttttcccccttatcttttg-ccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||| |||| | ||||||  ||||||||||||||||||||||||||    
T  9869790 ttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctc 9869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattt 236  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  12441364 ggcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 19514525 - 19514580
Alignment:
Q  190 ggcttaattgcacttttccccct-tatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||| ||| ||||||||||  ||||||||||||||||||||    
T  23011432 ttaattgcactttttccc-ttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 9665879 - 9665828
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  9665879 ggcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 10098996 - 10098941
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| |||||||||||||||| ||| ||  |||| ||||||||||||||||||||||    
T  10098996 taggtttaattgcacttttcctcct-atagtttgtcaattgtgcgattttgcacccc 10098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 23011309 - 23011261
Alignment:
Q  193 ttaattgcacttttcccccttatctttt-gccaattgtgcgattttgca 240  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||    
T  23011309 ttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 34147140 - 34147193
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||||||  ||||  |||  ||||||||||||||||||||||    
T  34147140 aggcttaattgcacttttccc--ttatagtttatcaattgtgcgattttgcacccc 34147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 6750 - 6648
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcaattttgcaccccatctttttgccccctc 288  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||     
T  6750 ggcttaattgcacttttccccct-atcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 6652  T
Q  289 tctg 292  Q
    ||||    
T  6651 tctg 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 6393 - 6451
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  6393 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  195 aattgcacttttcccccttatctttt-gccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 438925 - 438987
Alignment:
Q  185 atttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  438925 attttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 439255 - 439196
Alignment:
Q  188 taggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  439255 taggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc 439196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 183717 - 183660
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||||    
T  183717 aggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  183367 ttaattgcacttttccccct-atcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 183592 - 183544
Alignment:
Q  193 ttaattgcacttttcccccttatcttttg-ccaattgtgcgattttgca 240  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  183592 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 292
Target Start/End: Original strand, 411911 - 412024
Alignment:
Q  180 ttataattta--ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcaattttgcaccccatctt 277  Q
    ||||||||||  |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||         ||| ||||||||||| |||||    
T  411911 ttataatttatgggcttaattgcactttaccccct-atcttttgtcaattgtgcgattttgcaccccctcttttttttaagcgattttgcaccctatctt 412009  T
Q  278 tttgccccctctctg 292  Q
    |||||||||| ||||    
T  412010 tttgccccctttctg 412024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||  |||||||||| |||||||||||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 20104 - 20043
Alignment:
Q  183 taatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||    
T  20104 taatataggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgcccccc 20043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 19620 - 19674
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||| |||||||| | ||  |||||||||||||||||||||||||||    
T  19620 aggcttaattgcaattttccccat-atagtttgccaattgtgcgattttgcacccc 19674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 10011 - 10062
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  10011 aggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  50560 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 38750 - 38695
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  38750 aggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||||| || |||  |||||||||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 205686 - 205743
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  205686 aggcttaattgcatttttctccct-atcttttgctaattgtgcgattttgcaccccctc 205743  T

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Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||    
T  7653 ggcttaattgcactttttcccct-atcttttgctaattgtgcgattttgtaccccctc 7597  T

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Target: scaffold0376; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 7454 - 7508
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  7454 aggcttaattgcactttttcccct-atcttttgctaattatgcgattttgcacccc 7508  T

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Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||    
T  17209 ggcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctc 17153  T

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Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 16853 - 16908
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||  ||||||||  |||||||||| |||||||||||| |||||||||||    
T  16853 ggcttaattgcctttttcccc--tatcttttgctaattgtgcgattatgcaccccctc 16908  T

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Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 1505 - 1564
Alignment:
Q  184 aatttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||| ||||||||||||||||| || || ||||||||||||||||| |||||||||||||    
T  1505 aattttggcttaattgcactttttcctct-atcttttgccaattgtgtgattttgcacccc 1564  T

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Target: scaffold1221; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  193 ttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||| ||||    
T  1834 ttaattgcacttttccccct-atcttttgtttattgtgcgattttgcacctcctc 1781  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 72967 - 73023
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccctc 247  Q
    ||||||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctc 73023  T

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Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 9904 - 9960
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccccc 245  Q
    |||||||||||||||||| |||| |||  |||||||||||||||||||| |||||||    
T  9904 aggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

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Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 10374 - 10320
Alignment:
Q  187 ttaggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||| ||||||||||||  |||  |||||||||||| |||||||||||||    
T  10374 ttaggcttaatagcacttttcccc--tatagtttgccaattgtccgattttgcaccc 10320  T

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Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 329 - 380
Alignment:
Q  189 aggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgca 240  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  329 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 380  T

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Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 816 - 763
Alignment:
Q  190 ggcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacccc 244  Q
    ||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||    
T  816 ggcttaattgcactttttcccct-atagtttgccaattgtgcgattttgcacccc 763  T

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Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  191 gcttaattgcacttttcccccttatcttttgccaattgtgcgattttgcaccc 243  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  6927 gcttaattgcactttcccccct-atcttttgccaattgtgc-attttgcaccc 6877  T

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Target: scaffold0598; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  192 cttaattgcacttttcccccttatcttttgccaattgtgcgattttgcacc 242  Q
    |||||||||||| ||||||| |||||||||  ||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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