View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11977_high_47 (Length: 291)
Name: NF11977_high_47
Description: NF11977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11977_high_47 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 8883025 - 8882762
Alignment:
| Q |
18 |
tttattatactattatagtagtaatatgaggtgttttattttgaattaggattcattagaatctccacaagaaggtcgccttccagatgccaaacaaggt |
117 |
Q |
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| T |
8883025 |
tttattatactattatagtagtaatatgaggtgttttattttgaattaggattcattggaatctccacaagaaggtcgccttccagatgccaaacaaggt |
8882926 |
T |
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| Q |
118 |
aattaaatcatgttgttcaatcttgaaacttaactcaaaattacttaaaataagtatttcatttatcatatgaaaaactatatattatatttcaggcgca |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8882925 |
aattaaatcatgttgttcaatcttgaaacttaactcaaaattacttaaactaagtatttcatttatcatatgaaaaactatatattatatttcaggcgca |
8882826 |
T |
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| Q |
218 |
tcacatttaagagagatcttttatcgcatgggtctcactgataaagacattgtagctctctctg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8882825 |
tcacatttaagagagatcttttatcgcatgggtctcactgataaagacattgtagctctctctg |
8882762 |
T |
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