View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11977_low_49 (Length: 284)

Name: NF11977_low_49
Description: NF11977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11977_low_49
NF11977_low_49
[»] chr7 (55 HSPs)
chr7 (50-269)||(48645545-48645764)
chr7 (51-269)||(2441098-2441321)
chr7 (50-270)||(10345265-10345473)
chr7 (44-269)||(45290298-45290523)
chr7 (51-269)||(13449607-13449819)
chr7 (50-269)||(9864560-9864769)
chr7 (51-273)||(37415249-37415470)
chr7 (44-269)||(45286887-45287112)
chr7 (52-270)||(22611552-22611754)
chr7 (51-116)||(8277218-8277283)
chr7 (151-273)||(16165816-16165939)
chr7 (15-116)||(11919645-11919747)
chr7 (50-116)||(26557730-26557796)
chr7 (50-116)||(35961331-35961397)
chr7 (51-116)||(4543028-4543093)
chr7 (164-269)||(8277057-8277162)
chr7 (164-269)||(11919803-11919908)
chr7 (52-116)||(4595828-4595892)
chr7 (151-269)||(11397973-11398092)
chr7 (207-267)||(37166128-37166188)
chr7 (166-269)||(4542868-4542971)
chr7 (207-270)||(9132741-9132804)
chr7 (195-270)||(14683413-14683488)
chr7 (170-269)||(20594334-20594433)
chr7 (51-269)||(23224731-23224948)
chr7 (50-116)||(4695712-4695778)
chr7 (51-269)||(6603530-6603744)
chr7 (51-116)||(4547100-4547165)
chr7 (164-269)||(4595947-4596052)
chr7 (196-269)||(4695552-4695625)
chr7 (164-269)||(9271403-9271508)
chr7 (164-269)||(17730885-17730990)
chr7 (151-273)||(5796620-5796742)
chr7 (96-273)||(7227595-7227774)
chr7 (158-264)||(26136061-26136166)
chr7 (158-264)||(26144441-26144546)
chr7 (195-269)||(26557570-26557644)
chr7 (208-269)||(4546940-4547001)
chr7 (210-267)||(20080702-20080759)
chr7 (212-269)||(35961162-35961219)
chr7 (207-267)||(3067958-3068018)
chr7 (157-269)||(13842711-13842822)
chr7 (51-130)||(44017603-44017682)
chr7 (50-107)||(17731060-17731117)
chr7 (228-273)||(5242152-5242198)
chr7 (50-108)||(5826533-5826591)
chr7 (50-108)||(8398066-8398124)
chr7 (211-265)||(10469219-10469273)
chr7 (50-108)||(11825180-11825238)
chr7 (50-108)||(26153400-26153458)
chr7 (50-103)||(11397878-11397931)
chr7 (118-215)||(18562424-18562520)
chr7 (132-176)||(17730997-17731040)
chr7 (132-176)||(26557682-26557725)
chr7 (132-176)||(35961281-35961324)
[»] chr3 (96 HSPs)
chr3 (50-269)||(52200082-52200301)
chr3 (49-269)||(16184490-16184712)
chr3 (52-269)||(43809749-43809968)
chr3 (50-269)||(10885026-10885250)
chr3 (50-273)||(28007878-28008100)
chr3 (152-273)||(55031904-55032029)
chr3 (152-273)||(55034764-55034889)
chr3 (51-269)||(35412679-35412890)
chr3 (55-271)||(8461307-8461514)
chr3 (51-269)||(538996-539211)
chr3 (51-269)||(18641580-18641797)
chr3 (51-269)||(18644576-18644793)
chr3 (14-269)||(30690905-30691155)
chr3 (65-269)||(54461184-54461381)
chr3 (51-269)||(2873733-2873949)
chr3 (51-269)||(24125668-24125884)
chr3 (51-269)||(11190696-11190911)
chr3 (54-269)||(24128945-24129158)
chr3 (50-176)||(31549453-31549579)
chr3 (132-269)||(10106487-10106624)
chr3 (51-269)||(54723911-54724126)
chr3 (50-269)||(52309431-52309640)
chr3 (51-269)||(7486740-7486956)
chr3 (51-269)||(28266086-28266303)
chr3 (44-269)||(53815997-53816222)
chr3 (59-273)||(32287135-32287352)
chr3 (51-269)||(6922689-6922905)
chr3 (51-176)||(43927116-43927234)
chr3 (150-269)||(19301412-19301530)
chr3 (164-269)||(16244042-16244147)
chr3 (149-269)||(19304595-19304714)
chr3 (51-267)||(23298423-23298638)
chr3 (164-269)||(45896550-45896655)
chr3 (166-269)||(2775651-2775754)
chr3 (166-269)||(2778894-2778997)
chr3 (207-270)||(11784934-11784997)
chr3 (166-269)||(25584846-25584949)
chr3 (207-270)||(37408849-37408912)
chr3 (195-269)||(6434729-6434803)
chr3 (51-269)||(50461359-50461573)
chr3 (51-116)||(2775814-2775879)
chr3 (51-116)||(2779056-2779121)
chr3 (164-269)||(20728567-20728672)
chr3 (164-269)||(29343794-29343899)
chr3 (51-116)||(45896710-45896775)
chr3 (164-269)||(49742839-49742944)
chr3 (165-269)||(10902109-10902213)
chr3 (56-116)||(49742724-49742784)
chr3 (210-269)||(10881649-10881708)
chr3 (210-269)||(43927004-43927063)
chr3 (50-116)||(10902269-10902335)
chr3 (195-269)||(27092063-27092137)
chr3 (124-273)||(30219886-30220034)
chr3 (50-269)||(47051665-47051881)
chr3 (52-116)||(16244202-16244266)
chr3 (118-273)||(17546022-17546176)
chr3 (207-267)||(25442822-25442882)
chr3 (207-266)||(46885112-46885171)
chr3 (50-116)||(10881809-10881875)
chr3 (50-116)||(20728444-20728510)
chr3 (53-115)||(41977331-41977393)
chr3 (207-273)||(52990865-52990931)
chr3 (51-116)||(25585006-25585071)
chr3 (50-130)||(3306077-3306157)
chr3 (226-270)||(17141576-17141620)
chr3 (55-130)||(12541113-12541188)
chr3 (208-271)||(17039986-17040049)
chr3 (51-130)||(28327672-28327751)
chr3 (51-130)||(28330997-28331076)
chr3 (158-264)||(22416749-22416854)
chr3 (195-265)||(31549345-31549415)
chr3 (195-269)||(35751610-35751684)
chr3 (208-269)||(3840686-3840747)
chr3 (208-269)||(9392903-9392964)
chr3 (207-264)||(12561197-12561254)
chr3 (195-267)||(17528712-17528784)
chr3 (207-267)||(17531619-17531679)
chr3 (149-256)||(22993602-22993708)
chr3 (207-270)||(34983816-34983879)
chr3 (207-270)||(54720139-54720202)
chr3 (228-270)||(15195286-15195328)
chr3 (227-269)||(41977170-41977212)
chr3 (209-267)||(48064000-48064058)
chr3 (229-271)||(3292943-3292986)
chr3 (50-108)||(2279441-2279499)
chr3 (46-108)||(4250635-4250697)
chr3 (50-108)||(10960136-10960194)
chr3 (50-108)||(10963643-10963701)
chr3 (50-108)||(10967152-10967210)
chr3 (50-108)||(30157853-30157911)
chr3 (195-269)||(47055095-47055169)
chr3 (50-108)||(47055253-47055311)
chr3 (90-139)||(19301116-19301165)
chr3 (60-116)||(3840846-3840902)
chr3 (52-108)||(18883461-18883517)
chr3 (241-269)||(25486307-25486335)
[»] chr2 (67 HSPs)
chr2 (50-269)||(25820666-25820885)
chr2 (50-269)||(25138750-25138970)
chr2 (51-269)||(24235162-24235381)
chr2 (51-269)||(24238434-24238653)
chr2 (50-273)||(26365996-26366206)
chr2 (44-148)||(10601037-10601142)
chr2 (50-269)||(13971724-13971933)
chr2 (49-273)||(29440557-29440778)
chr2 (51-269)||(37279500-37279715)
chr2 (44-269)||(5105793-5106007)
chr2 (51-269)||(9185248-9185463)
chr2 (50-269)||(31427364-31427580)
chr2 (44-273)||(25870846-25871073)
chr2 (51-273)||(25874243-25874462)
chr2 (51-269)||(9188476-9188691)
chr2 (51-269)||(25959513-25959727)
chr2 (51-269)||(8888702-8888917)
chr2 (51-269)||(11347718-11347934)
chr2 (195-269)||(42368676-42368750)
chr2 (164-269)||(40781538-40781643)
chr2 (55-269)||(30274596-30274807)
chr2 (161-273)||(22021130-22021246)
chr2 (207-270)||(22630906-22630969)
chr2 (207-273)||(16179189-16179255)
chr2 (51-257)||(33310745-33310947)
chr2 (50-116)||(43723926-43723992)
chr2 (164-269)||(31585874-31585979)
chr2 (51-116)||(40781698-40781763)
chr2 (164-269)||(43723766-43723871)
chr2 (207-270)||(37937196-37937259)
chr2 (50-116)||(6826997-6827063)
chr2 (51-269)||(38015585-38015799)
chr2 (195-269)||(43207855-43207929)
chr2 (59-116)||(42368531-42368588)
chr2 (214-273)||(10600977-10601036)
chr2 (207-266)||(12219865-12219924)
chr2 (226-273)||(45493152-45493199)
chr2 (51-130)||(45499182-45499261)
chr2 (226-273)||(45500894-45500941)
chr2 (207-273)||(17877168-17877234)
chr2 (164-269)||(5666584-5666688)
chr2 (208-269)||(6826837-6826898)
chr2 (59-116)||(31585762-31585819)
chr2 (151-269)||(45457228-45457347)
chr2 (207-267)||(1386399-1386459)
chr2 (149-269)||(36808359-36808481)
chr2 (207-267)||(40259116-40259176)
chr2 (64-116)||(43207715-43207767)
chr2 (51-130)||(40677583-40677662)
chr2 (50-116)||(13137114-13137180)
chr2 (158-256)||(16790686-16790783)
chr2 (92-265)||(9966229-9966404)
chr2 (195-259)||(13137017-13137081)
chr2 (195-267)||(27266857-27266929)
chr2 (50-116)||(15470684-15470750)
chr2 (228-270)||(17874585-17874627)
chr2 (207-259)||(3875363-3875415)
chr2 (164-247)||(15470546-15470629)
chr2 (50-108)||(1503246-1503304)
chr2 (50-108)||(1506450-1506508)
chr2 (53-115)||(5666745-5666806)
chr2 (50-108)||(13518538-13518596)
chr2 (50-108)||(45454098-45454156)
chr2 (50-108)||(45457386-45457444)
chr2 (132-176)||(5666695-5666738)
chr2 (132-176)||(6826949-6826992)
chr2 (132-176)||(43723878-43723921)
[»] chr8 (41 HSPs)
chr8 (50-273)||(5538592-5538815)
chr8 (51-269)||(18721109-18721319)
chr8 (50-273)||(23643897-23644118)
chr8 (49-273)||(22173753-22173965)
chr8 (51-269)||(16953858-16954072)
chr8 (57-273)||(45155098-45155311)
chr8 (50-176)||(5980114-5980240)
chr8 (50-269)||(14421826-14422040)
chr8 (151-273)||(33883268-33883392)
chr8 (61-269)||(43681707-43681908)
chr8 (58-273)||(25231158-25231372)
chr8 (59-269)||(25591310-25591517)
chr8 (209-273)||(21279747-21279811)
chr8 (51-268)||(18824218-18824431)
chr8 (164-269)||(20887616-20887721)
chr8 (51-116)||(23597439-23597504)
chr8 (207-270)||(33419736-33419799)
chr8 (195-273)||(17931058-17931136)
chr8 (90-273)||(10663976-10664156)
chr8 (151-269)||(14589540-14589659)
chr8 (51-268)||(18825711-18825924)
chr8 (164-269)||(12583089-12583197)
chr8 (195-269)||(36710600-36710674)
chr8 (51-116)||(20887776-20887841)
chr8 (208-273)||(38248376-38248441)
chr8 (207-267)||(10498190-10498250)
chr8 (50-116)||(12583252-12583318)
chr8 (195-269)||(25594621-25594695)
chr8 (207-264)||(23619340-23619397)
chr8 (165-257)||(5584330-5584422)
chr8 (195-270)||(8911729-8911804)
chr8 (208-269)||(2560634-2560695)
chr8 (158-267)||(31284757-31284865)
chr8 (210-269)||(5980292-5980351)
chr8 (208-259)||(12516429-12516480)
chr8 (50-108)||(30645721-30645779)
chr8 (207-269)||(44027069-44027131)
chr8 (51-108)||(10664191-10664248)
chr8 (208-269)||(13196938-13196999)
chr8 (44-115)||(5584247-5584319)
chr8 (52-108)||(31986523-31986579)
[»] chr5 (56 HSPs)
chr5 (50-273)||(21332497-21332722)
chr5 (50-273)||(21335516-21335740)
chr5 (51-269)||(42063006-42063229)
chr5 (51-269)||(22936763-22936975)
chr5 (50-269)||(4099348-4099555)
chr5 (161-269)||(14375723-14375833)
chr5 (51-269)||(31863799-31864015)
chr5 (49-269)||(14015960-14016176)
chr5 (161-273)||(22131310-22131422)
chr5 (50-269)||(7625187-7625403)
chr5 (50-116)||(7271262-7271328)
chr5 (51-269)||(43491840-43492056)
chr5 (51-116)||(41876577-41876642)
chr5 (139-269)||(26752608-26752739)
chr5 (149-269)||(41306442-41306565)
chr5 (207-270)||(26907431-26907494)
chr5 (50-269)||(30066393-30066621)
chr5 (208-269)||(7271100-7271161)
chr5 (208-269)||(20055858-20055919)
chr5 (208-269)||(33552205-33552266)
chr5 (51-116)||(34832008-34832073)
chr5 (90-142)||(28441314-28441366)
chr5 (207-271)||(40583331-40583395)
chr5 (207-270)||(23044225-23044288)
chr5 (166-265)||(41876699-41876798)
chr5 (50-176)||(28787142-28787263)
chr5 (226-273)||(18952773-18952820)
chr5 (50-140)||(10629423-10629513)
chr5 (158-264)||(12058420-12058525)
chr5 (195-269)||(26895568-26895642)
chr5 (50-116)||(33552365-33552431)
chr5 (207-264)||(12088047-12088104)
chr5 (207-264)||(34132959-34133016)
chr5 (207-264)||(34143190-34143247)
chr5 (207-267)||(11959154-11959214)
chr5 (52-116)||(39192574-39192638)
chr5 (164-265)||(34831852-34831953)
chr5 (211-273)||(39192410-39192472)
chr5 (14-103)||(41306314-41306401)
chr5 (151-265)||(21915211-21915324)
chr5 (51-269)||(37215129-37215340)
chr5 (161-219)||(31575552-31575609)
chr5 (232-269)||(28787330-28787367)
chr5 (56-121)||(40915985-40916050)
chr5 (226-258)||(17664646-17664678)
chr5 (234-270)||(26292874-26292910)
chr5 (49-113)||(32838116-32838180)
chr5 (137-173)||(33320818-33320854)
chr5 (50-101)||(2453536-2453587)
chr5 (50-108)||(3195328-3195386)
chr5 (50-108)||(19686417-19686475)
chr5 (50-108)||(30764472-30764530)
chr5 (50-108)||(34652581-34652639)
chr5 (226-267)||(17748526-17748567)
chr5 (134-173)||(9690950-9690990)
chr5 (132-176)||(39192526-39192569)
[»] chr4 (80 HSPs)
chr4 (51-273)||(15432158-15432380)
chr4 (49-273)||(18911578-18911807)
chr4 (50-269)||(37103030-37103254)
chr4 (50-269)||(5681511-5681726)
chr4 (51-269)||(12238349-12238558)
chr4 (51-269)||(27014347-27014561)
chr4 (54-274)||(34017609-34017824)
chr4 (51-269)||(5706476-5706693)
chr4 (50-270)||(3797637-3797847)
chr4 (50-270)||(35510074-35510291)
chr4 (61-269)||(33408154-33408355)
chr4 (50-269)||(19820811-19821014)
chr4 (51-269)||(34319740-34319955)
chr4 (51-266)||(5670664-5670876)
chr4 (51-266)||(5672982-5673194)
chr4 (51-269)||(44808778-44808993)
chr4 (164-269)||(52006464-52006569)
chr4 (50-269)||(33927056-33927272)
chr4 (165-278)||(15445299-15445412)
chr4 (51-116)||(38283302-38283367)
chr4 (52-269)||(56195611-56195824)
chr4 (51-266)||(40616629-40616843)
chr4 (139-269)||(52530842-52530973)
chr4 (50-116)||(3720594-3720660)
chr4 (195-269)||(39501732-39501806)
chr4 (164-269)||(27676988-27677093)
chr4 (164-269)||(38283422-38283527)
chr4 (51-116)||(40902896-40902961)
chr4 (164-269)||(40903016-40903121)
chr4 (207-270)||(11195758-11195821)
chr4 (158-273)||(46955406-46955520)
chr4 (50-116)||(12786356-12786422)
chr4 (50-116)||(19827655-19827721)
chr4 (195-269)||(19864481-19864555)
chr4 (195-269)||(24150756-24150830)
chr4 (51-269)||(29324909-29325122)
chr4 (195-269)||(39498393-39498467)
chr4 (195-269)||(40795086-40795160)
chr4 (50-116)||(40795246-40795312)
chr4 (164-269)||(19827499-19827604)
chr4 (59-116)||(27676876-27676933)
chr4 (165-269)||(15429790-15429894)
chr4 (165-269)||(15436404-15436508)
chr4 (56-116)||(24043957-24044017)
chr4 (207-270)||(21419871-21419934)
chr4 (207-270)||(25962141-25962204)
chr4 (207-270)||(40493343-40493406)
chr4 (226-269)||(48415524-48415567)
chr4 (51-269)||(48637589-48637806)
chr4 (195-269)||(12782988-12783062)
chr4 (195-269)||(15812100-15812174)
chr4 (50-116)||(52006343-52006409)
chr4 (207-264)||(18673058-18673115)
chr4 (44-116)||(48415331-48415403)
chr4 (50-256)||(56198950-56199153)
chr4 (50-192)||(15429668-15429798)
chr4 (50-192)||(15436282-15436412)
chr4 (226-269)||(3719207-3719250)
chr4 (226-269)||(24044136-24044179)
chr4 (207-270)||(30392651-30392714)
chr4 (210-269)||(44164866-44164925)
chr4 (195-265)||(19859486-19859556)
chr4 (207-269)||(29544850-29544912)
chr4 (209-269)||(15164277-15164337)
chr4 (226-270)||(53009553-53009597)
chr4 (210-269)||(49270763-49270822)
chr4 (50-108)||(10386180-10386238)
chr4 (50-116)||(15445177-15445243)
chr4 (228-273)||(53094587-53094633)
chr4 (55-116)||(44165026-44165087)
chr4 (50-108)||(10248062-10248120)
chr4 (195-269)||(15405045-15405119)
chr4 (50-108)||(18860014-18860072)
chr4 (124-273)||(8877393-8877543)
chr4 (51-108)||(24150916-24150973)
chr4 (63-116)||(49270924-49270977)
chr4 (132-176)||(3720546-3720589)
chr4 (132-176)||(12786308-12786351)
chr4 (50-110)||(26060742-26060802)
chr4 (132-176)||(44164978-44165021)
[»] chr1 (41 HSPs)
chr1 (51-269)||(1950269-1950493)
chr1 (44-269)||(27536346-27536569)
chr1 (51-269)||(6070781-6070991)
chr1 (51-273)||(2794309-2794528)
chr1 (51-269)||(28111142-28111357)
chr1 (51-269)||(20398939-20399154)
chr1 (49-269)||(37183685-37183901)
chr1 (51-259)||(3796650-3796854)
chr1 (164-269)||(45941502-45941607)
chr1 (50-116)||(2405755-2405821)
chr1 (139-256)||(21434383-21434499)
chr1 (50-267)||(42022728-42022940)
chr1 (51-269)||(45960568-45960782)
chr1 (195-269)||(49498461-49498535)
chr1 (139-269)||(31204924-31205054)
chr1 (51-116)||(45941662-45941727)
chr1 (165-269)||(21107225-21107329)
chr1 (165-269)||(21111092-21111196)
chr1 (165-269)||(21114432-21114536)
chr1 (196-268)||(23021888-23021960)
chr1 (50-269)||(29643043-29643259)
chr1 (50-116)||(21110970-21111036)
chr1 (50-116)||(41058114-41058180)
chr1 (164-269)||(41058235-41058340)
chr1 (164-270)||(2405594-2405700)
chr1 (207-273)||(27354920-27354986)
chr1 (209-270)||(905663-905724)
chr1 (151-256)||(16060886-16060992)
chr1 (55-116)||(49852955-49853016)
chr1 (166-266)||(21018402-21018502)
chr1 (151-256)||(16056720-16056826)
chr1 (110-192)||(11666879-11666962)
chr1 (50-116)||(21018279-21018345)
chr1 (55-108)||(23021747-23021800)
chr1 (51-108)||(49498324-49498381)
chr1 (213-269)||(673052-673108)
chr1 (51-130)||(23441095-23441174)
chr1 (151-219)||(7635783-7635849)
chr1 (151-256)||(16062132-16062238)
chr1 (154-219)||(34065082-34065149)
chr1 (132-176)||(2405707-2405750)
[»] scaffold1208 (1 HSPs)
scaffold1208 (14-269)||(269-518)
[»] scaffold0035 (2 HSPs)
scaffold0035 (51-269)||(62601-62821)
scaffold0035 (207-266)||(63946-64005)
[»] scaffold0381 (1 HSPs)
scaffold0381 (51-269)||(5222-5436)
[»] scaffold1785 (1 HSPs)
scaffold1785 (51-259)||(1-211)
[»] scaffold0005 (1 HSPs)
scaffold0005 (51-273)||(293103-293318)
[»] scaffold0690 (1 HSPs)
scaffold0690 (55-269)||(7538-7750)
[»] scaffold1063 (1 HSPs)
scaffold1063 (50-261)||(2593-2797)
[»] scaffold0962 (1 HSPs)
scaffold0962 (132-269)||(3182-3320)
[»] chr6 (53 HSPs)
chr6 (51-266)||(23384573-23384787)
chr6 (51-265)||(9954053-9954263)
chr6 (58-269)||(3596609-3596819)
chr6 (137-219)||(24371354-24371435)
chr6 (50-269)||(17106441-17106648)
chr6 (51-269)||(2379316-2379531)
chr6 (50-190)||(23008226-23008360)
chr6 (50-190)||(23780004-23780138)
chr6 (58-273)||(14281348-14281562)
chr6 (151-269)||(9839316-9839432)
chr6 (50-116)||(23842611-23842677)
chr6 (61-273)||(13005271-13005482)
chr6 (165-269)||(20185830-20185934)
chr6 (165-269)||(22150057-22150161)
chr6 (207-270)||(4512561-4512624)
chr6 (124-274)||(22561058-22561206)
chr6 (166-273)||(30655526-30655633)
chr6 (210-268)||(11125676-11125734)
chr6 (14-116)||(11187985-11188086)
chr6 (51-116)||(30655693-30655758)
chr6 (55-269)||(1125562-1125773)
chr6 (207-270)||(26896235-26896298)
chr6 (51-269)||(26942256-26942473)
chr6 (195-273)||(6513338-6513416)
chr6 (195-273)||(32109750-32109828)
chr6 (59-116)||(11729161-11729218)
chr6 (51-108)||(23381993-23382050)
chr6 (158-267)||(24155294-24155402)
chr6 (207-267)||(13947106-13947166)
chr6 (209-273)||(19476084-19476148)
chr6 (226-269)||(5738079-5738122)
chr6 (186-265)||(10290062-10290141)
chr6 (158-264)||(18855953-18856058)
chr6 (50-116)||(23848017-23848083)
chr6 (158-270)||(24410383-24410494)
chr6 (195-266)||(11402346-11402417)
chr6 (207-270)||(24400264-24400327)
chr6 (50-108)||(10290228-10290286)
chr6 (207-264)||(28230685-28230743)
chr6 (211-268)||(2372340-2372397)
chr6 (208-269)||(28107764-28107825)
chr6 (56-176)||(5737890-5738005)
chr6 (163-273)||(2846385-2846498)
chr6 (50-140)||(5260020-5260110)
chr6 (153-256)||(13021176-13021277)
chr6 (229-269)||(23847855-23847894)
chr6 (238-269)||(28111773-28111804)
chr6 (50-108)||(3826644-3826702)
chr6 (50-108)||(5618031-5618089)
chr6 (50-108)||(14966466-14966524)
chr6 (50-108)||(34502588-34502646)
chr6 (207-256)||(7128398-7128447)
chr6 (132-176)||(10290170-10290213)
[»] scaffold2073 (1 HSPs)
scaffold2073 (57-269)||(694-905)
[»] scaffold1755 (1 HSPs)
scaffold1755 (50-269)||(205-443)
[»] scaffold0250 (1 HSPs)
scaffold0250 (51-273)||(19476-19696)
[»] scaffold0080 (2 HSPs)
scaffold0080 (164-273)||(27189-27298)
scaffold0080 (50-116)||(27355-27421)
[»] scaffold0427 (1 HSPs)
scaffold0427 (44-269)||(3601-3826)
[»] scaffold0218 (1 HSPs)
scaffold0218 (195-270)||(10492-10567)
[»] scaffold0520 (4 HSPs)
scaffold0520 (195-269)||(8183-8257)
scaffold0520 (50-116)||(1361-1427)
scaffold0520 (58-116)||(8039-8097)
scaffold0520 (167-269)||(1485-1586)
[»] scaffold0412 (1 HSPs)
scaffold0412 (51-269)||(215-431)
[»] scaffold0015 (2 HSPs)
scaffold0015 (164-265)||(198235-198336)
scaffold0015 (50-116)||(198389-198454)
[»] scaffold0007 (3 HSPs)
scaffold0007 (164-269)||(248602-248707)
scaffold0007 (50-116)||(248764-248830)
scaffold0007 (51-173)||(92620-92739)
[»] scaffold0002 (2 HSPs)
scaffold0002 (149-273)||(99155-99277)
scaffold0002 (149-270)||(118365-118484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (207-270)||(2981-3044)
[»] scaffold0009 (1 HSPs)
scaffold0009 (211-273)||(241580-241642)
[»] scaffold0126 (1 HSPs)
scaffold0126 (158-269)||(14247-14357)
[»] scaffold0757 (3 HSPs)
scaffold0757 (50-116)||(5596-5662)
scaffold0757 (195-269)||(5436-5510)
scaffold0757 (132-176)||(5548-5591)
[»] scaffold0270 (1 HSPs)
scaffold0270 (195-269)||(27-101)
[»] scaffold0056 (1 HSPs)
scaffold0056 (225-273)||(67519-67567)
[»] scaffold0048 (1 HSPs)
scaffold0048 (207-267)||(15498-15558)
[»] scaffold0191 (1 HSPs)
scaffold0191 (207-270)||(3999-4062)
[»] scaffold0233 (1 HSPs)
scaffold0233 (151-256)||(10038-10142)
[»] scaffold0045 (1 HSPs)
scaffold0045 (50-269)||(89854-90070)
[»] scaffold0038 (1 HSPs)
scaffold0038 (207-264)||(31183-31241)
[»] scaffold1809 (2 HSPs)
scaffold1809 (164-269)||(150-254)
scaffold1809 (59-116)||(309-366)
[»] scaffold0084 (2 HSPs)
scaffold0084 (207-267)||(19366-19426)
scaffold0084 (207-267)||(29451-29511)
[»] scaffold0065 (1 HSPs)
scaffold0065 (211-266)||(58661-58716)
[»] scaffold0807 (1 HSPs)
scaffold0807 (207-269)||(2049-2111)
[»] scaffold0066 (1 HSPs)
scaffold0066 (195-269)||(57553-57627)
[»] scaffold0996 (1 HSPs)
scaffold0996 (50-139)||(1742-1831)
[»] scaffold0360 (1 HSPs)
scaffold0360 (50-108)||(6521-6579)
[»] scaffold0034 (1 HSPs)
scaffold0034 (139-212)||(48313-48385)
[»] scaffold0014 (1 HSPs)
scaffold0014 (52-108)||(228881-228937)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 48645764 - 48645545
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48645764 tccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggatgtataaaatattttgatgcctgaggcagttgatttgatttgattgcaa 48645665  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  48645664 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagatgagactagatctttcgaatcatcgatgttcccctaattggtatactgc 48645565  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  48645564 acctattcttatgaatgatt 48645545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 2441098 - 2441321
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatat--tttga--tgcc-cgaggcagttgatttgatttgatt 145  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |  ||| |  |||| | |||||||||||| | |||||||    
T  2441098 ccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgtataaattttcttttaaattgccactaggcagttgattgg-tttgatt 2441196  T
Q  146 gcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggta 243  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||| |  |||  |||||||||||| ||| ||||||| |||||||||||    
T  2441197 gcaataaaagtaaataacagaaaataaagatagttttggaaaa-ataaggagagagatgagatcaggtctttcgaatcatcgatgttctcctaattggta 2441295  T
Q  244 tactgcacctattcttatgaatgatt 269  Q
    |||||||||||||| ||| |||||||    
T  2441296 tactgcacctattcgtattaatgatt 2441321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 10345473 - 10345265
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |          || ||||||||||| |||||     
T  10345473 tccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt---------gtagatttgatttgtttgca- 10345384  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||||||| | |||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  10345383 taaaagtaa-tgacagaaaataaagattggttttaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgc 10345286  T
Q  250 acctattcttatgaatgattc 270  Q
    |||||||||||||||||||||    
T  10345285 acctattcttatgaatgattc 10345265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 269
Target Start/End: Original strand, 45290298 - 45290523
Alignment:
Q  44 tatcgttcca-cgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatt 140  Q
    |||||||||| |||||||| ||||||||||||| ||  |||||  | |||||||||||||| |||| |  ||| |  ||||||||||||| | |||| ||    
T  45290298 tatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtt 45290397  T
Q  141 tgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaat 238  Q
    ||      |||||| ||||||| |||||||||||||||   |||||||  ||| | ||||||| ||| ||||||||||||| |||  |||||||||||||    
T  45290398 tgc-----ataaaattaaataaacagaaaataaagatagagttggaaagaataagagagagatgagattaggtctttcgaatcatctatgttcccctaat 45290492  T
Q  239 tggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||    
T  45290493 tggtatactgcacctattcttatgaatgatt 45290523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 13449607 - 13449819
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||| ||||||||||||| ||| | |||| |||||||||||||||||||||  |||||| |       | || |  ||||||||||||||| |    
T  13449607 ccacgaggactatgttaatctcaatttagcagtaaagtaaatatttaggatgtataaataattttgttt------gtagat--tttgatttgattgca-t 13449697  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||| ||||||| |||||||||||||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||| ||||||||||||||||||    
T  13449698 aaaattaaataaacagaaaataaagatagttttggaaaagacaaggagagagatgagaacaggtctttcgaatcatcgatggtcccctaattggtatact 13449797  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  13449798 gcacctattcgtattaatgatt 13449819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 9864560 - 9864769
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||  |          || |||||||||||||||| |    
T  9864560 tccatgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtgtaaattattttttt---------tgtagatttgatttgattgc-a 9864649  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| |||||||||||||| ||||||  | || ||||||||   ||||||| |||  ||||||||| || |||  ||||  |||||||||||||||| |    
T  9864650 taaaattaaataacagaaaagaaagattcggttagaaaatatgaagagagatgagatcaggtctttcaaatcatctatgtatccctaattggtatactac 9864749  T
Q  250 acctattcttatgaatgatt 269  Q
    |||||||| ||| |||||||    
T  9864750 acctattcgtattaatgatt 9864769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 37415249 - 37415470
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||| |  ||| |  |||||   ||||| | |||| ||||          
T  37415249 ccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgtataaatttcttttagttgccctgagcagtagttttggtttgc----- 37415343  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| |||||  ||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||    
T  37415344 ataaaattaaataaacagaatgtaaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatac 37415443  T
Q  247 tgcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||||    
T  37415444 tgcacctattcttatgaatgattctct 37415470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 269
Target Start/End: Original strand, 45286887 - 45287112
Alignment:
Q  44 tatcgttcca-cgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatt 140  Q
    |||||||||| |||||||| ||||||||||||| ||  |||||  | |||||||||||||| |||| |  ||| |  ||||||||||||| | |||| ||    
T  45286887 tatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtt 45286986  T
Q  141 tgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaat 238  Q
    ||      |||||| ||||||| |||||||||||||||   |||||||  ||| | ||||||| ||| ||||||||||||| |||  ||||| |||||||    
T  45286987 tgc-----ataaaattaaataaacagaaaataaagatagagttggaaagaataagagagagatgagattaggtctttcgaatcatctatgtttccctaat 45287081  T
Q  239 tggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||    
T  45287082 tggtatactgcacctattcttatgaatgatt 45287112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 270
Target Start/End: Original strand, 22611552 - 22611754
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaata 151  Q
    |||||||||| ||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||| |           | ||||||||||||| ||| ||    
T  22611552 cacgaggactttgttaatctcaatttagcaatatagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgatggca-ta 22611639  T
Q  152 aaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcac 251  Q
    ||| ||| | |||||||||||||||  ||||  | ||||    || |||| ||  ||||||||||||| |||||||||||||||||||| |||||||||     
T  22611640 aaattaa-tgacagaaaataaagattggttttaagaataa---gatagatgagtttaggtctttcgaatcattgatgttcccctaattgatatactgcat 22611735  T
Q  252 ctattcttatgaatgattc 270  Q
    |||||||||||||||||||    
T  22611736 ctattcttatgaatgattc 22611754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8277283 - 8277218
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  8277283 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 8277218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 273
Target Start/End: Complemental strand, 16165939 - 16165816
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||||||||||||||||||    
T  16165939 aaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactg 16165841  T
Q  249 cacctattcttatgaatgattctct 273  Q
    ||||||||  ||| |||||||||||    
T  16165840 cacctatttgtattaatgattctct 16165816  T

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Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 11919645 - 11919747
Alignment:
Q  15 actaaatactatcgaagtagtnnnnnnnntatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatatt 113  Q
    |||||||||||||||||||||        ||| ||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  11919645 actaaatactatcgaagtagtaaaaaaaatatagttcccacgaggactgtattaatctcaatttagaaataaagtaaatatttaggatgtataaattatt 11919744  T
Q  114 ttg 116  Q
    |||    
T  11919745 ttg 11919747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 26557796 - 26557730
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  26557796 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 26557730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 35961397 - 35961331
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  35961397 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 35961331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 4543093 - 4543028
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  4543093 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 4543028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 8277162 - 8277057
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||    
T  8277162 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaagcatctatgttcccctaattggtataatgcacctattcttatga 8277063  T
Q  264 atgatt 269  Q
    ||||||    
T  8277062 atgatt 8277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 11919803 - 11919908
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||| |||||||||||||||    
T  11919803 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattcttatga 11919902  T
Q  264 atgatt 269  Q
    ||||||    
T  11919903 atgatt 11919908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 4595828 - 4595892
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  4595828 cacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 4595892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 11397973 - 11398092
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaata-tatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||| ||||||  ||||||||| |  ||| ||||||| ||| ||||||||||||  ||| ||||||||||||||||||||||||    
T  11397973 aaaagtaaataacagaaaat-aagatagttttggaaaagacaatgagagagatgagattaggtctttcgattcatcgatgttcccctaattggtatactg 11398071  T
Q  249 cacctattcttatgaatgatt 269  Q
     |||||||| ||| |||||||    
T  11398072 tacctattcgtattaatgatt 11398092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 37166128 - 37166188
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  37166128 taggtctttcgaatcatttatgttcccctaattggtatactgcacctattcttgtgaatga 37166188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 4542971 - 4542868
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  ||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  4542971 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttccgaatcatctatgttcccctaattggtatactgcacctattcttatgaat 4542872  T
Q  266 gatt 269  Q
    ||||    
T  4542871 gatt 4542868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 9132741 - 9132804
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  9132741 taggtctttcgaatcatctatgttcccctaattggtatactgcacatattcttatgaatgattc 9132804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 14683413 - 14683488
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  14683413 gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattcttatgaatgattc 14683488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 20594433 - 20594334
Alignment:
Q  170 taaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||    
T  20594433 taaagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacgtattcttatgaatgatt 20594334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 23224731 - 23224948
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||| ||||| ||| |||||  |||||| |||||||||||||| |  ||| |  ||||| ||||||| | |||| ||||          
T  23224731 ccacgaggactgtgttaatttcaatttagcaataaggtaaataattaggatgtataaatttcttttagttgccctaggcagtagttttggtttgc----- 23224825  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| |||||  ||||||||   |||||||  ||  | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||    
T  23224826 ataaaattaaataaacagaatgtaaagatagagttggaaagaatgagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatac 23224925  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||| |||||||||||||||||    
T  23224926 tgcacatattcttatgaatgatt 23224948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 4695778 - 4695712
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||| |||||||    
T  4695778 tccacgaggactgtgttaatctaaatttagcaataaagtaaatatttaggatgtataaattattttg 4695712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 6603744 - 6603530
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | || |||||||||| | |||||||     |||     
T  6603744 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgtccgaggcagtagttttgatt-----gca- 6603651  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggaga--gataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||| |  ||| |||  | |||||||||| ||| |||||||||||||||||||||||    
T  6603650 taaatttaaataacagaaaataa-gatagttttggaaaagacaaggacaaagatgagatcaagtctttcgaatcatcgatgttcccctaattggtatact 6603552  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  6603551 gcacctattcgtattaatgatt 6603530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 4547165 - 4547100
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||||| |||||||    
T  4547165 ccacgaggactgtgttaatctcagtttagcaataaagtaaatatttaggatgtataaattattttg 4547100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 4595947 - 4596052
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||| ||| |||||||||||    
T  4595947 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatacttcacatattcttatga 4596046  T
Q  264 atgatt 269  Q
    ||||||    
T  4596047 atgatt 4596052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 4695625 - 4695552
Alignment:
Q  196 agagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||| |||| |||||||||||| |||  || ||||||||||||||||||||||||||||||||| |||||||    
T  4695625 agagatgagaccaggtctttcgaatcatctatattcccctaattggtatactgcacctattcttatcaatgatt 4695552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 9271403 - 9271508
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||| ||| ||| |||  ||||||||||||||||||||||||||||||||||||||    
T  9271403 agaaaatatagatttggttagaaaatatgaagagagatgagaacaggtatttagaatcatctatgttcccctaattggtatactgcacctattcttatga 9271502  T
Q  264 atgatt 269  Q
    ||||||    
T  9271503 atgatt 9271508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 17730990 - 17730885
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  | |||||||||| |||  ||||| ||||||||||||||||||||||||||||||||    
T  17730990 agaaaatatagatttggttagaaaatatgaagagagatgagatcatgtctttcgaatcatctatgtttccctaattggtatactgcacctattcttatga 17730891  T
Q  264 atgatt 269  Q
    ||||||    
T  17730890 atgatt 17730885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 273
Target Start/End: Complemental strand, 5796742 - 5796620
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgca 250  Q
    |||||||||||||||||||||||| | ||||| ||||| |||||||||||| |||||| |||||||||  | ||   |||||||||||||||| ||  ||    
T  5796742 aaaagtaaataacagaaaataaagtt-tgtttagaaaagatatggagagatgagactaagtctttcgagtcctttgggttcccctaattggtacacaaca 5796644  T
Q  251 ccta-ttcttatgaatgattctct 273  Q
    |||| |||||| |||| |||||||    
T  5796643 cctatttcttaagaataattctct 5796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 273
Target Start/End: Complemental strand, 7227774 - 7227595
Alignment:
Q  96 taggatgtataaaa--tattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatat 193  Q
    |||||||| |||||  ||||||| ||||| ||||||| |||||||||||||||||  |||  ||||||||||||| ||||||| |  || ||||||||      
T  7227774 taggatgtgtaaaagttattttgttgccctaggcagtagatttgatttgattgcataaaatttaaataacagaaagtaaagattttattagaaaatatgg 7227675  T
Q  194 ggagagataagactaggtctttcgaa-ccattgatgttcccctaattggtatactgcaccta-ttcttatgaatgattctct 273  Q
      ||||||  ||  |||||||||||| ||  ||  |||||||| |||||||||||||||||| |||||| ||||||||||||    
T  7227674 aaagagatgggatcaggtctttcgaatcctctg--gttcccctgattggtatactgcacctatttcttacgaatgattctct 7227595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 26136061 - 26136166
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  26136061 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 26136159  T
Q  258 ttatgaa 264  Q
    || ||||    
T  26136160 ttgtgaa 26136166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 26144441 - 26144546
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  26144441 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 26144539  T
Q  258 ttatgaa 264  Q
    || ||||    
T  26144540 ttgtgaa 26144546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 26557644 - 26557570
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||  |||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  26557644 gagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattcttatgaatgatt 26557570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 4547001 - 4546940
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||||| ||||||||| ||||||||||||||||||||||||||||    
T  4547001 aggtctttcgaatcatctatgtttccctaattgatatactgcacctattcttatgaatgatt 4546940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 20080702 - 20080759
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||    
T  20080702 gtctttcgaatcatctatgttcccctaattggtatactgcacctattcttctgaatga 20080759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 35961219 - 35961162
Alignment:
Q  212 ctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  35961219 ctttcgaatcatctatgttcctctaattggtatactgcacctattcttatgaatgatt 35961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 3067958 - 3068018
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||||||||| |||||||    
T  3067958 taggtctttcgaatcatctatgttcccctaattgttatactgcacctattcttgtgaatga 3068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 13842822 - 13842711
Alignment:
Q  157 aaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctatt 256  Q
    ||||||||||||||||||||  ||||  | |||| |  ||||||| |||  |||||||||||| ||| ||| ||||| ||||||||||||||||||||||    
T  13842822 aaataacagaaaataaagattggttttaagaata-agagagagatgagatcaggtctttcgaatcatcgatattcccgtaattggtatactgcacctatt 13842724  T
Q  257 cttatgaatgatt 269  Q
    | ||| |||||||    
T  13842723 cgtattaatgatt 13842711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 44017603 - 44017682
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||| ||||| ||| ||||| || |||||||||||||| |||| ||||||  |||| ||||||||    
T  44017603 ccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaaattattttagtgcctgaggcagt 44017682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 17731117 - 17731060
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataa 107  Q
    ||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||||||    
T  17731117 tccacaaggactgtgttaatctcagtttagcaataaagtgaatatttaggatgtataa 17731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 5242152 - 5242198
Alignment:
Q  228 gttcccctaattggtatactgcaccta-ttcttatgaatgattctct 273  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  5242152 gttcccttaattggtatactgcacctatttcttacgaatgattctct 5242198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 5826533 - 5826591
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  5826533 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 5826591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 8398124 - 8398066
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  8398124 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 8398066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 10469273 - 10469219
Alignment:
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    ||||||||| |||  |||||||||||||| ||| ||||||||||||||| |||||    
T  10469273 tctttcgaatcatctatgttcccctaattagtacactgcacctattcttgtgaat 10469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 11825180 - 11825238
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  11825180 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 11825238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 26153458 - 26153400
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  26153458 tccacgaggactgtgttaatctcaacttagcaataaagttaatatataggatgtgtaaa 26153400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 11397878 - 11397931
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgt 103  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| ||||||||    
T  11397878 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgt 11397931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 18562424 - 18562520
Alignment:
Q  118 tgcccgaggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtcttt 215  Q
    ||||| ||| ||| |||||| |||||||||| ||||| | ||| ||||||||||||||| || || |||||||||  ||||||| |||| | ||||||    
T  18562424 tgccctaggtagtagatttggtttgattgca-taaaaattaatgacagaaaataaagatttgattagaaaatatagagagagatgagaccatgtcttt 18562520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 17731040 - 17730997
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  17731040 gatttgatttgattgca-taaaattaaataacataaaataaagat 17730997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 26557725 - 26557682
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  26557725 gatttgatttgattgca-taaaattaaataacataaaataaagat 26557682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 35961324 - 35961281
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  35961324 gatttgatttgattgca-taaaattaaataacataaaataaagat 35961281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 52200301 - 52200082
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52200301 tccacgaggactgtgttaatttcaatttagcaataaagtaaatattaaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 52200202  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  52200201 taaaaataaataacagaaaataaagatatgtttgaaaaatatatggagagatgagactaggtctttcgaatcattgatgttcccctaattggtatactgc 52200102  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  52200101 acctattcttatgaatgatt 52200082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 49 - 269
Target Start/End: Original strand, 16184490 - 16184712
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16184490 ttccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaaatattttgatgcctgaggcagttgatttgatttgattgca 16184589  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaa-tatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||||||||||| | ||||||||||||  |||||||||  ||| | ||||||| |||  |||||||||||| ||| ||||||||||||||||||||||    
T  16184590 ataaaagtaaataaaaaaaaataaagatagttttggaaaagaataggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatac 16184689  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  16184690 tgcacctattcttatgaatgatt 16184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 43809968 - 43809749
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaata 151  Q
    |||| ||||||||||||| | ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43809968 cacggggactgtgttaattttaatttagcaataaagtaaatatttaggatgtataaaatattttgatgcccgaggcagtagatttgatttgattgcaata 43809869  T
Q  152 aaagtaaataacagaaaataaagatatgtttggaaaa-tatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||||||||||| ||||||||||||  |||||||||  ||| | ||||||| |||  |||||||||||| ||| |||||||||||||||||||||||||    
T  43809868 aaagtaaataacataaaataaagatagttttggaaaagaataggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgc 43809769  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||| ||||||||||||||    
T  43809768 acctactcttatgaatgatt 43809749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 10885250 - 10885026
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgat 144  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||  | ||||||  |||| | ||| |||||||| | ||||||    
T  10885250 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggtagttgattgg-tttgat 10885152  T
Q  145 tgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatgga-gagataagactaggtctttcgaaccattgatgttcccctaattggta 243  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||  | ||||| ||||||||||||||||| |||  ||||||||||||||||||    
T  10885151 tgcaataaaagtaaataacagaaaataaagatagttttggaaaatatatataagagatgagactaggtctttcgaatcatctatgttcccctaattggta 10885052  T
Q  244 tactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||    
T  10885051 tactgcacctattcttatgaatgatt 10885026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 28007878 - 28008100
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||  ||||  ||||||| ||||||||||||||||     
T  28007878 tccacgaggactatgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttgccttaggcagtagatttgatttgattgc- 28007976  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||||||| ||| ||||||||||||||| || ||  |||  ||| | ||||||| ||| ||||||||||||| |||  ||||||||| |||| |||||||    
T  28007977 ataaaagt-aatgacagaaaataaagat-tggttctaaagaataagagagagatgagattaggtctttcgaatcatctatgttccccaaatttgtatact 28008074  T
Q  248 gcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||| |||||||    
T  28008075 gcacctattcttatgaattattctct 28008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 55031904 - 55032029
Alignment:
Q  152 aaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcac 251  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  55031904 aaagtaaatatcagaaaataaagatatgtttggaaaatatacggagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcac 55032003  T
Q  252 ct----attcttatgaatgattctct 273  Q
    ||    ||||||||||||||||||||    
T  55032004 ctattcattcttatgaatgattctct 55032029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 152 - 273
Target Start/End: Original strand, 55034764 - 55034889
Alignment:
Q  152 aaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcac 251  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  55034764 aaagtaaatatcagaaaataaagatatgtttggaaaatacatggagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcac 55034863  T
Q  252 ct----attcttatgaatgattctct 273  Q
    ||    ||||||||||||||||||||    
T  55034864 ctattcattcttatgaatgattctct 55034889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 35412890 - 35412679
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||| ||||||| |          || ||||||||||||||||| |    
T  35412890 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttgttt---------gtagatttgatttgattgca-t 35412801  T
Q  151 aaaagtaaataac-agaaaataaagatatgtttggaaaatatat--ggagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||| |||||||  ||||||||| ||||  ||||||||||||||  |||||||| ||||||||||||||||  |||  ||||||| ||||||||||||||    
T  35412800 aaaattaaataaatagaaaataaggatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcctctaattggtatact 35412701  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  35412700 gcacctattcttatgaatgatt 35412679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 55 - 271
Target Start/End: Original strand, 8461307 - 8461514
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaa 154  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||| |          || ||||||||||||||||| |||||    
T  8461307 gaggaatgtgttaatctcaatttagaaataaagtaaatatttaggatttataaattattttgttt---------gtagatttgatttgattgca-taaaa 8461396  T
Q  155 gtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacct 253  Q
     ||||||| |||||||||||||||  ||||||||| |||  ||||||| ||| ||||||||||||| |||  ||||| ||||||||||||||||||||||    
T  8461397 ttaaataaacagaaaataaagatagttttggaaaagataaagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacct 8461496  T
Q  254 attcttatgaatgattct 271  Q
    |||||| |||||||||||    
T  8461497 attcttgtgaatgattct 8461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 539211 - 538996
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| |||||||||||||| | |||| ||||      ||    
T  539211 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcccgaggcagtagttttggtttgc-----at 539117  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  |||||||| |||| | ||||||| ||| ||||||||||||| |||  ||||| ||||||||||||||||     
T  539116 aaaattaaataaacagaatataaagatagttttggaaagtataagagagagatgagattaggtctttcgaatcatatatgtttccctaattggtatacta 539017  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||||||||||||| |||||||    
T  539016 cacctattcttataaatgatt 538996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 18641580 - 18641797
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaata-ttttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| || ||||| |||| |  |||| ||||| |||||||| | |||| ||||      |    
T  18641580 ccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgc-----a 18641674  T
Q  150 taaaagtaaataa-cagaaaataaagatatgtttggaaaatat--atggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||  |||||||||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  18641675 taaaattaaataaacagaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatac 18641774  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  18641775 tgcacctattcttatgaatgatt 18641797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 18644576 - 18644793
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaata-ttttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| || ||||| |||| |  |||| ||||| |||||||| | |||| ||||      |    
T  18644576 ccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgc-----a 18644670  T
Q  150 taaaagtaaataa-cagaaaataaagatatgtttggaaaatat--atggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||  |||||||||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  18644671 taaaattaaataaacagaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatac 18644770  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  18644771 tgcacctattcttatgaatgatt 18644793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 30691155 - 30690905
Alignment:
Q  14 cactaaatactatcgaagtagtnnnnnnnntatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatat 112  Q
    ||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||    
T  30691155 cactaaatactatcgaagtagtaaaaa---tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattat 30691059  T
Q  113 tttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactagg 210  Q
    ||| ||||| ||| |||| | |||| ||||      |||||| ||||||| ||||| |||||||||  ||||||||  ||| | |||||||||||  |||    
T  30691058 tttaatgcctgagacagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagttttggaaagaataagagagagataagatcagg 30690964  T
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  30690963 tctttcgaatcatctatgtttccctaattggtatactgcacctattcttatgaatgatt 30690905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 54461381 - 54461184
Alignment:
Q  65 ttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaataa-c 163  Q
    ||||||||||| ||| |||||| ||||||||||||||||| ||| ||||||| |          || ||||||||||||||||| ||||| ||||||| |    
T  54461381 ttaatctcaatttagcaataaagtaaatatttaggatgtaaaaattattttgttt---------gtagatttgatttgattgca-taaaattaaataaac 54461292  T
Q  164 agaaaataaagatatgtttggaaa--atatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttat 261  Q
    ||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||  |||  ||||||||| ||| ||||||||||||||||||||||    
T  54461291 agaaaataaagatagttttggaaactatatatggagagatgagactaggtctttcgagtcatcaatgttccccaaatgggtatactgcacctattcttat 54461192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 2873949 - 2873733
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||| ||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      ||    
T  2873949 ccacgaggactgtgttaatcttaatttagcaataatgttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----at 2873855  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg---gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||| |||||||||||| |||||||||   |||||||  ||| |   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  2873854 aaaattaaataacagaatataaagatagagttggaaagaataagagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 2873755  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  2873754 gcacctattcttatgaatgatt 2873733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 24125884 - 24125668
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |  ||| |  ||||| ||||||| | |||| ||||          
T  24125884 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgc----- 24125790  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||||| |||||||||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  ||||| ||||||||||||||||    
T  24125789 ataaaattaaataacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatact 24125690  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  24125689 gcacctattcttatgaatgatt 24125668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 11190911 - 11190696
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||| ||||| ||||||||||| ||| |||||  | |||| ||||||||| |||| |||||| |||||||||||||||| |||| ||||      ||    
T  11190911 ccacgagaactgtattaatctcaatttagtaataaggttaatacttaggatgtgtaaattattttaatgcccgaggcagttgttttggtttgc-----at 11190817  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||| ||    
T  11190816 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattg 11190717  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  11190716 cacctattcttatgaatgatt 11190696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 24129158 - 24128945
Alignment:
Q  54 cgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgcaata 151  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |  ||| |  ||||| ||||||| | |||| ||||      |||    
T  24129158 cgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgc-----ata 24129064  T
Q  152 aaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgca 250  Q
    ||| |||||||||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  ||||| |||||||||||||||||||    
T  24129063 aaattaaataacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgca 24128964  T
Q  251 cctattcttatgaatgatt 269  Q
    |||||||||||||||||||    
T  24128963 cctattcttatgaatgatt 24128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 31549579 - 31549453
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||  | ||| ||||||| ||||||||||||||||     
T  31549579 tccacgatgactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttaccctaggcagtagatttgatttgattgc- 31549481  T
Q  149 ataaaagtaaataacagaaaataaagat 176  Q
    |||||||||||||||| |||||||||||    
T  31549480 ataaaagtaaataacataaaataaagat 31549453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 10106487 - 10106624
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgt 229  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||  ||||||||||||||  ||||||| ||||||||||||| ||| |||  ||||    
T  10106487 gatttgatttgattgca-taaaattaaataaacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaatcatctatgt 10106585  T
Q  230 tcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    | || |||||||||||||||||||||||||||||||||||    
T  10106586 ttcc-taattggtatactgcacctattcttatgaatgatt 10106624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 54724126 - 54723911
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||||| |||||||| ||||| ||| |||||| | |||||||||||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  54724126 ccacgaggaccgtgttaatttcaatttagcaataaagttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 54724032  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  ||||||| |||| |||  |||||||| ||||||||||||||    
T  54724031 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcaggtcttccgaatcatctatgttcccataattggtatactg 54723932  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  54723931 cacctattcttatgaatgatt 54723911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 52309431 - 52309640
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||  ||||||| ||||| ||| |||||| ||||||||||||||||||||| ||||||| |          || ||||| |||||||||||     
T  52309431 tccacgaggacaatgttaatttcaatttagcaataaagtaaatatttaggatgtataaattattttgttt---------gtagatttaatttgattgca- 52309520  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||  ||||||||| |||||||||||  | || ||||||||   ||||||| |||  |||||||||||| ||   |||||||||||||||||||| |||    
T  52309521 taaatttaaataacataaaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcaactatgttcccctaattggtatattgc 52309620  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  52309621 acctattcttatgaatgatt 52309640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 7486956 - 7486740
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    |||| |||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  ||| |  ||||| ||||||| | ||||    | |||||    
T  7486956 ccacaaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttttaattgccctaggcagtagttttg----ggttgca 7486861  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
     ||||| |||||||||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  7486860 -taaaattaaataacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 7486762  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  7486761 gcacctattcttatgaatgatt 7486740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 28266303 - 28266086
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||||||||||| |||| |  ||| |  ||||| ||||||| | |||| ||||          
T  28266303 ccacgaggactgtgttaatctcaatttagcaataagctaaatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgc----- 28266209  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||    
T  28266208 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatac 28266109  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||| ||||||||||||    
T  28266108 tgcacctatttttatgaatgatt 28266086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 269
Target Start/End: Complemental strand, 53816222 - 53815997
Alignment:
Q  44 tatcgttcca-cgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatt 140  Q
    |||||||||| |||||||| ||||||||||||| ||  |||||  | |||||||||||||| |||| |  ||| |  ||||||||||||| | |||| ||    
T  53816222 tatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtt 53816123  T
Q  141 tgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaat 238  Q
    ||      |||||| ||||||| |||||||||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||    
T  53816122 tgc-----ataaaattaaataaacagaaaataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaat 53816028  T
Q  239 tggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||    
T  53816027 tggtatactgcacctattcttatgaatgatt 53815997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 32287135 - 32287352
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaa 158  Q
    ||||||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  ||||||||||| | | |||||||     ||| ||||| |||    
T  32287135 actgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgcccgaggcaatagttttgatt-----gca-taaaattaa 32287228  T
Q  159 ataa-cagaaaataaagatatgtttggaaaatatatggagagata--------agactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| |||||||||||||||  ||||||||| ||  ||||||| |        |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  32287229 ataaacagaaaataaagatagttttggaaaagattaggagagagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 32287328  T
Q  250 acctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||    
T  32287329 acctattcttatgaatgattctct 32287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 6922905 - 6922689
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgat-gcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||| |||||||||||||||||| ||| |||||| | |||||||||||||| |||| ||||||| | ||  |||| ||| | |||| ||||      |    
T  6922905 ccacgaagactgtgttaatctcaatttagcaataaagttaatatttaggatgtgtaaattattttgtttgcgtgaggtagtagttttggtttgc-----a 6922811  T
Q  150 taaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||| ||||||| ||||| |||||||||   ||| |||  ||| | ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  6922810 taaaattaaataaacagaatataaagatagagttgaaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 6922711  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  6922710 gcacctattcttatgaatgatt 6922689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 43927234 - 43927116
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| |     ||  | |||||||||||||||||| ||    
T  43927234 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtt----tag--atttgatttgatttgattgc-at 43927142  T
Q  151 aaaagtaaataacagaaaataaagat 176  Q
    |||| |||||||||| ||||||||||    
T  43927141 aaaattaaataacaggaaataaagat 43927116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 19301412 - 19301530
Alignment:
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa-ccattgatgttcccctaattggtatactg 248  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||  ||| |||||| || ||| || ||||    
T  19301412 taaaattaaataacagaaaataaagatttgtttgaaaaatatat-gagagatgagactaggtctttcgaatcctctga-gttcccgtatttgctacactg 19301509  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  19301510 cacctattcttatgaatgatt 19301530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 16244147 - 16244042
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  16244147 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 16244048  T
Q  264 atgatt 269  Q
    ||||||    
T  16244047 atgatt 16244042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 19304595 - 19304714
Alignment:
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa-ccattgatgttcccctaattggtatact 247  Q
    |||||| ||||||| |||||||||| || |||||||||||||||| ||||||| |||||||||||||| || ||  ||| ||||||||  |||||| |||    
T  19304595 ataaaattaaataatagaaaataaatatttgtttggaaaatatat-gagagatgagactaggtctttcaaatcctctga-gttcccctgcttggtacact 19304692  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  19304693 gcacctattcttatgaatgatt 19304714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 267
Target Start/End: Original strand, 23298423 - 23298638
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||||||||||| |||| |  ||| |  ||||| ||||||| | |||| ||||          
T  23298423 ccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgc----- 23298517  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| ||| ||||||||||||| |||  | |||||| |||||||||| |    
T  23298518 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagattaggtctttcgaatcatctaagttcccttaattggtatgc 23298617  T
Q  247 tgcacctattcttatgaatga 267  Q
    |||||||||||||||||||||    
T  23298618 tgcacctattcttatgaatga 23298638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 45896655 - 45896550
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  45896655 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 45896556  T
Q  264 atgatt 269  Q
    ||||||    
T  45896555 atgatt 45896550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 2775754 - 2775651
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  2775754 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaat 2775655  T
Q  266 gatt 269  Q
    ||||    
T  2775654 gatt 2775651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 2778997 - 2778894
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  2778997 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaat 2778898  T
Q  266 gatt 269  Q
    ||||    
T  2778897 gatt 2778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 11784997 - 11784934
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  11784997 taggtctttcgaatcatcgatgttcccctaattggtatactgcacatattcttatgaatgattc 11784934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 25584949 - 25584846
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  25584949 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaat 25584850  T
Q  266 gatt 269  Q
    ||||    
T  25584849 gatt 25584846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 37408912 - 37408849
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  37408912 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgattc 37408849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 6434729 - 6434803
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| ||| ||||||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  6434729 gagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctatttttatgaatgatt 6434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 50461359 - 50461573
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| || ||| | |||| |  ||| | ||||||||||||| | |||||||     |||     
T  50461359 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctatgatatgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 50461452  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||||||||||    
T  50461453 taaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatact 50461551  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  50461552 gcacctattcgtattaatgatt 50461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 2775879 - 2775814
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  2775879 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 2775814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 2779121 - 2779056
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  2779121 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 2779056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 20728567 - 20728672
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||||| |||||||||||    
T  20728567 agaaaatatagatttgattagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattcttatga 20728666  T
Q  264 atgatt 269  Q
    ||||||    
T  20728667 atgatt 20728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 29343794 - 29343899
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||    
T  29343794 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattcttatga 29343893  T
Q  264 atgatt 269  Q
    ||||||    
T  29343894 atgatt 29343899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 45896775 - 45896710
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  45896775 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 45896710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 49742839 - 49742944
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  49742839 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatattgcacctattcttatga 49742938  T
Q  264 atgatt 269  Q
    | ||||    
T  49742939 acgatt 49742944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 10902213 - 10902109
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    |||||||||||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||| |||||| |||||||||||    
T  10902213 gaaaataaagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcaccgattcttatgaa 10902114  T
Q  265 tgatt 269  Q
    |||||    
T  10902113 tgatt 10902109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 49742724 - 49742784
Alignment:
Q  56 aggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  49742724 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 49742784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 10881708 - 10881649
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  10881708 gtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 10881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 43927063 - 43927004
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  43927063 gtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 43927004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 10902335 - 10902269
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  10902335 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttg 10902269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 27092137 - 27092063
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  27092137 gagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattcttattaatgatt 27092063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 30219886 - 30220034
Alignment:
Q  124 aggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccat 223  Q
    |||||||||||||| ||||||||||  |||  |||||||| |||| ||||| | || || || |||||  | |||||| |||  | |||||||||| |||    
T  30219886 aggcagttgatttggtttgattgcataaaatttaaataactgaaagtaaaggtttgattagagaatatgag-agagatgagatcatgtctttcgaatcat 30219984  T
Q  224 tgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
      | |||||||||||||||  |||||||||||||||||||||||||||||    
T  30219985 ctaagttcccctaattggtcaactgcacctattcttatgaatgattctct 30220034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 47051881 - 47051665
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||| ||||||||||||| ||| ||||| || ||||| ||| |||| |||| |  ||| | ||||||||||||| | || |   ||  ||||    
T  47051881 tccacgaggactatgttaatctcaatttagcaataacattaatatctagcatgtgtaaatttcttttagtgcccgaggcagtaggttgg---tg--tgca 47051787  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatata-tg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      |||||||||||||||||||||| ||||  ||||||||| | | || ||||||| |||  |||||||||||| |||  |||||||||||| ||||||||    
T  47051786 taaaaagtaaataacagaaaataa-gatagttttggaaaagacaatgagagagatgagatcaggtctttcgaatcatctatgttcccctaactggtatac 47051688  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||||||||| ||| |||||||    
T  47051687 tgcacctattcgtattaatgatt 47051665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 16244266 - 16244202
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  16244266 cacgaggaccgtgttaatctcaatttagtaataaagtaaatatttaggatgtataaattattttg 16244202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 273
Target Start/End: Complemental strand, 17546176 - 17546022
Alignment:
Q  118 tgcccgaggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcg 217  Q
    ||||| || |||| |||||  |||||||||| ||||| ||||||| |||||||||| || || || ||||||||   ||||||| |||  || |||||||    
T  17546176 tgccctagacagtagatttagtttgattgca-taaaactaaataatagaaaataaatatttgattagaaaatatggagagagatgagatcagatctttcg 17546078  T
Q  218 aaccattgatgttcccctaattggtatactgcaccta-ttcttatgaatgattctct 273  Q
    || | ||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17546077 aatc-ttctggttcccctaattggtatactgcacctatttcttatgaatgattctct 17546022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 25442822 - 25442882
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||||||| |||||||    
T  25442822 taggtctttcgaatcatttatgttcccctaattggtatattgcacctattcttgtgaatga 25442882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 46885171 - 46885112
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||    
T  46885171 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatg 46885112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 10881875 - 10881809
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  10881875 tccacgaggactgtgttaatatcaatttagcaataaagtaaatatttaggatatataaattattttg 10881809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 20728444 - 20728510
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| ||||||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||||||    
T  20728444 tccatgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttg 20728510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 41977393 - 41977331
Alignment:
Q  53 acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatatttt 115  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||| ||||||    
T  41977393 acgaggactgtgttaatcttaatttagcaataaaataaatatttaggatatataaattatttt 41977331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 52990931 - 52990865
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||||||| |||  ||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  52990931 taggtctttcgaatcatctatgttcccctaattggtataccgcacctattcttgtgaatgagtctct 52990865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 25585071 - 25585006
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||| ||  |||||||||| ||||||||||||||||||||| |||||||    
T  25585071 ccacaaggactgtgttaatcttaacttagaaataaagtaaatatttaggatgtataaattattttg 25585006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 3306157 - 3306077
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| |||| |||||| ||||| ||||||||    
T  3306157 tccacgaggactgtgttaatctcaacctagcaataaagttaatatctaggatgtgtaaattattttaatgcctgaggcagt 3306077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 17141620 - 17141576
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  17141620 atgttcccctaattggtatattgcacctattcttatgaatgattc 17141576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 12541113 - 12541188
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| ||||||||    
T  12541113 gaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagt 12541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 17039986 - 17040049
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattct 271  Q
    |||||||||||| ||| ||||||||| ||||||||||||  ||| |||||||||||||||||||    
T  17039986 aggtctttcgaatcatcgatgttcccttaattggtatacaacacttattcttatgaatgattct 17040049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 28327751 - 28327672
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||| ||||| ||| ||||| || |||||||||||||| |||| ||||||  |||| ||||||||    
T  28327751 ccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaaattattttagtgcctgaggcagt 28327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 28331076 - 28330997
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||| ||||| ||| ||||| || |||||||||||||| |||| ||||||  |||| ||||||||    
T  28331076 ccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaaattattttagtgcctgaggcagt 28330997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 22416749 - 22416854
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  |||||||||||||||||||||||||| |||||    
T  22416749 aataacagaaaataaagattggttttaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattc 22416847  T
Q  258 ttatgaa 264  Q
    || ||||    
T  22416848 ttgtgaa 22416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 31549415 - 31549345
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||||||||  |||||||| ||| |||  | ||| ||||||||||||||||||||||||||||||||||    
T  31549415 gagagataagatcaggtcttttgaatcatctaagtttccctaattggtatactgcacctattcttatgaat 31549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 35751684 - 35751610
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| ||| ||||||||||||||| ||||||||||||| ||| ||| |||||||    
T  35751684 gagagatgagatcaggtctttcgaatcatcgatgttcccctaatttgtatactgcaccttttcgtattaatgatt 35751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 3840747 - 3840686
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||||||||||||||| |||||| ||||||||||||| |||||||    
T  3840747 aggtctttcgaatcatccatgttcccctaattgatatactacacctattcttataaatgatt 3840686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 9392964 - 9392903
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||| ||| |||  |||||||||||||||||||||| ||||||| |||||||||||||    
T  9392964 aggtcttttgaatcatctatgttcccctaattggtatactacacctatacttatgaatgatt 9392903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 12561197 - 12561254
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  ||||||||||||||| |||||||||||||||||| ||||    
T  12561197 taggtctttcgaatcatctatgttcccctaattgatatactgcacctattcttgtgaa 12561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 17528712 - 17528784
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||| ||| |||||| |||||| |||  ||||||||||||||| |||||||||| ||||||| |||||||    
T  17528712 gagagatgagattaggtcgttcgaatcatctatgttcccctaattgatatactgcacatattcttgtgaatga 17528784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 17531619 - 17531679
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    |||||| |||||| |||  ||||||| |||||||||||||||||||||||||| |||||||    
T  17531619 taggtcgttcgaatcatctatgttcctctaattggtatactgcacctattcttgtgaatga 17531679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 22993602 - 22993708
Alignment:
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||||| ||||||| ||  | ||||| ||||| |||  ||||||| ||||||||||||||||| | |  | |||||||||||||||| ||||    
T  22993602 ataatagtaaataatagaaaattaaagt-tgtttagaaaagatagagagagatgagactaggtctttcgaatcctctaagttcccctaattggtacactg 22993700  T
Q  249 cacctatt 256  Q
    ||||||||    
T  22993701 cacctatt 22993708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 34983816 - 34983879
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||  ||  |||||||||| |||||||||| |||||||||||| ||||||||||    
T  34983816 taggtctttcgaatgatctatgttcccctgattggtataccgcacctattcttgtgaatgattc 34983879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 54720202 - 54720139
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  ||||| || ||||||||||| ||||||||||||| ||||||||||    
T  54720202 taggtctttcgaatcatctatgtttccataattggtatattgcacctattcttgtgaatgattc 54720139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 15195286 - 15195328
Alignment:
Q  228 gttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  15195286 gttcccctaattggtatactgcacatattcttataaatgattc 15195328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 41977212 - 41977170
Alignment:
Q  227 tgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  41977212 tgttctcctaattggtatactgcacttattcttatgaatgatt 41977170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 48064000 - 48064058
Alignment:
Q  209 ggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    |||| |||||| |||  ||||||||||||||||||||||||| |||||||| |||||||    
T  48064000 ggtcgttcgaatcatctatgttcccctaattggtatactgcatctattcttgtgaatga 48064058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 3292943 - 3292986
Alignment:
Q  229 ttcccctaattggtatactgcaccta-ttcttatgaatgattct 271  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  3292943 ttcccctaattggtatattgcacctatttcttatgaatgattct 3292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 2279441 - 2279499
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  2279441 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 2279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 4250697 - 4250635
Alignment:
Q  46 tcgttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||| ||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  4250697 tcgtaccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 4250635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10960194 - 10960136
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  10960194 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 10960136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10963701 - 10963643
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  10963701 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 10963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10967210 - 10967152
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  10967210 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 10967152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 30157853 - 30157911
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  30157853 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 30157911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 47055169 - 47055095
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  |||||||| ||| | ||||||||||||||||| ||| |||||||    
T  47055169 gagagatgagatcaggtctttcgaatcatctatgttcccataactagtatactgcacctattcgtattaatgatt 47055095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 47055311 - 47055253
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||| ||||||||||||||| |||||||||  | ||||| |||||||| ||||    
T  47055311 tccacgaggattgtgttaatctcaatttagaaataacgttaatatctaggatgtgtaaa 47055253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 19301116 - 19301165
Alignment:
Q  90 aatatttaggatgtataaaatattttgatgcccgaggcagttgatttgat 139  Q
    |||||| ||||||| |||| ||||||||| ||||||||||| ||||||||    
T  19301116 aatattcaggatgtgtaaattattttgattcccgaggcagtagatttgat 19301165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 3840902 - 3840846
Alignment:
Q  60 ctgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||| |||||  ||| |||||||||| |||||||||||||| |||||| |||||||    
T  3840902 ctgtggtaatcgtaatttagaaataaagtaaatatttaggatctataaattattttg 3840846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 18883517 - 18883461
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  18883517 cacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 18883461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 25486335 - 25486307
Alignment:
Q  241 gtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||    
T  25486335 gtatactgcacctattcttatgaatgatt 25486307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 25820666 - 25820885
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25820666 tccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggatgtataaaatatttttatgcccgaggcagttgatttgatttgattgcaa 25820765  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  25820766 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagatgagactaggtctttcgaatcatcgatgttcccctaattgatatactgc 25820865  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  25820866 acctattcttatgaatgatt 25820885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 25138750 - 25138970
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||| | ||||||||||||||| ||| |||||| |||||| |||||||||||||| |||||||  ||||| ||||||| ||||||||||||||||     
T  25138750 tccacgagaaatgtgttaatctcaatttagcaataaagtaaatacttaggatgtataaattattttgtttgccctaggcagtagatttgatttgattgc- 25138848  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||| | ||||||| |||  ||||||||||||  || ||| || ||||||||||||||||    
T  25138849 ataaaattaaataacataaaataaagatttgtttggaaaatataagagagagatgagatcaggtctttcgaattatcgatatttccctaattggtatact 25138948  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||| ||||    
T  25138949 gcacctattcttatgaacgatt 25138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 24235381 - 24235162
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||| ||||||||| |||| ||||||  ||||||||||||| | |||| ||||||||||||    
T  24235381 ccacgaggactgtgttaatctcaatttagcaataaggttaatacttaggatgtgtaaattattttagtgcccgaggcagtagttttggtttgattgcaat 24235282  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||||||||||||||||||||||||    ||| |||  ||| | || |||| |||  ||||||||||||  ||  ||||||||||||||||||||||||    
T  24235281 aaaagtaaataacagaaaataaagatcgaattgaaaagaataagagaaagatgagatcaggtctttcgaattatctatgttcccctaattggtatactgc 24235182  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  24235181 acctattcttatgaatgatt 24235162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 24238653 - 24238434
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||| ||||||||| |||| ||||||  |||||||| |||| | |||| ||||||||||||    
T  24238653 ccacgaggactgtgttaatctcaatttagcaataaggttaatacttaggatgtgtaaattattttagtgcccgagacagtagttttggtttgattgcaat 24238554  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||||||||||||||||||||||||    |||||||  ||| | || |||| |||  ||||||||||||  ||  ||||||||||||||||||||||||    
T  24238553 aaaagtaaataacagaaaataaagatcgaattggaaagaataagagaaagatgagatcaggtctttcgaattatctatgttcccctaattggtatactgc 24238454  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  24238453 acctattcttatgaatgatt 24238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 26366206 - 26365996
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||||   | |||||| ||||||||||||||||||||| ||||||| |            ||  | |||||||||||||    
T  26366206 tccacgaggactgtgttaatctcaattcggcaataaagtaaatatttaggatgtataaattattttgtt------------tg--tagatttgattgcaa 26366121  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatat-ggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    ||||||||||||||||||||||||||||  ||||||||||||||  ||||||| ||||||||||||| |||  ||  |||||||||||||||||||| ||    
T  26366120 taaaagtaaataacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaattatctatgttcccctaattggtatagtg 26366021  T
Q  249 cacctattcttatgaatgattctct 273  Q
     ||||||||||||||||||||||||    
T  26366020 tacctattcttatgaatgattctct 26365996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 10601142 - 10601037
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttg 142  Q
    |||||||| |||||||||||||||||| ||||| ||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10601142 tatcgttcacacgaggactgtgttaatttcaatttagcaataaagtaaatatttaagatgtataaaatattttgatgcccgaggcagttgatttgatttg 10601043  T
Q  143 attgca 148  Q
    ||||||    
T  10601042 attgca 10601037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 13971724 - 13971933
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||| ||||||||||||| ||| |||||| | ||||||||||||||||||| ||||||| |          || |||||||||||||||||     
T  13971724 tccacgaggactttgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttgttt---------gtagatttgatttgattgca- 13971813  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| ||||||||| |||||  |||| || || ||||||||   ||||||| | |  |||||||||||| |||  ||||||||||||||||||||||||    
T  13971814 taaaattaaataacataaaatgtagatttggttagaaaatatgaagagagatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgc 13971913  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  13971914 acctattcttatgaatgatt 13971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 273
Target Start/End: Complemental strand, 29440778 - 29440557
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||          
T  29440778 ttccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc----- 29440684  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||  ||||||||  | | | ||||||| |||  |||||||||||  |||  ||||| |||||||||||||||    
T  29440683 ataaaattaaataaacagaatataaagatagttttggaaagaaaaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatac 29440584  T
Q  247 tgcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||||    
T  29440583 tgcacctattcttatgaatgattctct 29440557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 37279500 - 37279715
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||||||||||||||||||||  || |||||| | |||||||||||||| |||| ||||||  |||| ||||||||  ||||  || | ||||| |    
T  37279500 ccacgaggactgtgttaatctcaattcagcaataaagttaatatttaggatgtgtaaattattttagtgcctgaggcagt--attt--ttggtttgca-t 37279594  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||    
T  37279595 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactg 37279694  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  37279695 cacctattcttatgaatgatt 37279715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 269
Target Start/End: Complemental strand, 5106007 - 5105793
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttg 142  Q
    |||||||| ||| |||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||| |           | ||||| |||||    
T  5106007 tatcgttctcacaaggactgtgttaatctcaatttagaaataaagtaaatattcaggatgtataaattattttgtt-----------tagattttatttg 5105919  T
Q  143 attgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggt 242  Q
    |||||| ||||| ||||||||| ||||||||||| || || ||||||||   ||||||| |||  ||||||||| ||  ||  |||||||||||||||||    
T  5105918 attgca-taaaattaaataacataaaataaagatttggttagaaaatatgaagagagatgagatcaggtctttcaaattatctatgttcccctaattggt 5105820  T
Q  243 atactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||| |||||||||||    
T  5105819 atactgcacctattcatatgaatgatt 5105793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 9185248 - 9185463
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||||||||||||||||||||  || |||||| | |||||||||||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  9185248 ccacgaggactgtgttaatctcaattcagcaataaagttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 9185342  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||    
T  9185343 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactg 9185442  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||| |||||||||||||||||    
T  9185443 cacatattcttatgaatgatt 9185463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 31427364 - 31427580
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||| |||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  ||| | ||||||||||||| | |||||||     |||    
T  31427364 tccacgaagactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtggttttgatt-----gca 31427458  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||||||||||||||||    
T  31427459 taaaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatac 31427557  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||||||||| ||| |||||||    
T  31427558 tgcacctattcgtattaatgatt 31427580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 273
Target Start/End: Complemental strand, 25871073 - 25870846
Alignment:
Q  44 tatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttg 142  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||    
T  25871073 tatcgttcctacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttg 25870974  T
Q  143 attgcaataaaagtaaataacagaaaataaagatatgtttggaaa--atatatggagagataagactaggtctttcgaaccattgatgttcccctaattg 240  Q
          |||||| |||||||  |||||||||||||  ||||||||  ||| |  ||||||| |||  |||||||||||  |||  ||||| |||||||||    
T  25870973 -----cataaaattaaataaacgaaaataaagataattttggaaaagataaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattg 25870879  T
Q  241 gtatactgcacctattcttatgaatgattctct 273  Q
    |||| || ||||||||||| |||||||||||||    
T  25870878 gtatgctacacctattcttgtgaatgattctct 25870846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 25874462 - 25874243
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||| | |||||||| | |||| ||||      ||    
T  25874462 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgtctgaggcagtagttttggtttgc-----at 25874368  T
Q  151 aaaagtaaataacagaaaataaagatatgtttgg--aaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| |||||||  |||||||||||||  |||||  || ||| |  ||||||| |||  |||||||||||  |||  ||||| ||||||||||||||||     
T  25874367 aaaattaaataaacgaaaataaagataattttggtaaagataaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatacta 25874268  T
Q  249 cacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||    
T  25874267 cacctattcttatgaatgattctct 25874243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 9188476 - 9188691
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||| |||||||||||||||||  || |||||  | |||||||||||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  9188476 ccacgagtactgtgttaatctcaattcagcaataaggttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 9188570  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| |||||  ||||||||  ||||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||    
T  9188571 aaaattaaataaacagaatgtaaagatagttttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactg 9188670  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  9188671 cacctattcttatgaatgatt 9188691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 25959513 - 25959727
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||| |||||||||||||||||| ||| |||||  | || ||||||||||| |||| ||||||  |||  |||||||| | |||| ||||      ||    
T  25959513 ccacgatgactgtgttaatctcaatttagcaataaggttaacatttaggatgtgtaaattattttagtgcttgaggcagtagttttggtttgc-----at 25959607  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||||| ||||| |||||||||  ||||||||| |    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  25959608 aaaattaaataaacagaatataaagatagttttggaaaagaataagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 25959707  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  25959708 acctattcttatgaatgatt 25959727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 8888917 - 8888702
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  || | ||||| ||||||| | |||| ||||      ||    
T  8888917 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttagttgccctaggcagtagttttggtttgc-----at 8888823  T
Q  151 aaaagtaaat-aacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||| |||| || |||||||||   |||||||  ||| | ||||||| ||| |||||||||| || |||  |||||||||||||||||||||||    
T  8888822 aaaattaaatcaacataatataaagatagagttggaaagaataagagagagatgagattaggtctttcaaatcatctatgttcccctaattggtatactg 8888723  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  8888722 cacctattcttatgaatgatt 8888702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 11347718 - 11347934
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  |||||| |||||||||||||| |  ||| |  ||||| ||||||| | |||| |||| ||       
T  11347718 ccacgaggactgtgttaatctcaatttagcaataaggtaaataattaggatgtataaatttcttttagttgccctaggcagtagttttggtttgctta-- 11347815  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
      |||||||||||||||||||||| ||||   |||||||  ||  | || |||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  11347816 --aaaagtaaataacagaaaataa-gatagagttggaaagaatgagagatagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 11347912  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||| ||||||||||||||||||    
T  11347913 gcatctattcttatgaatgatt 11347934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 42368676 - 42368750
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||  ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42368676 gagagataagatcaggtctttcaaatcatttatgttcccctaattggtatactgcacctattcttatgaatgatt 42368750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 40781643 - 40781538
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  40781643 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 40781544  T
Q  264 atgatt 269  Q
    ||||||    
T  40781543 atgatt 40781538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 30274596 - 30274807
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaataaa 153  Q
    ||||||||||||||||||||| ||| |||||  ||||||| ||||||||||||| |  ||| | || | |||||||| | |||| ||||      |||||    
T  30274596 gaggactgtgttaatctcaatttagcaataacgtaaatatataggatgtataaatttcttttagtgactgaggcagtagttttggtttgc-----ataaa 30274690  T
Q  154 agtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    | ||||||| ||||| |||||||||  ||||||||| |    ||||||| |||  | |||||||||| |||  |||||| ||||||||||||||||||||    
T  30274691 attaaataaacagaatataaagatagttttggaaaagaataagagagatgagagcatgtctttcgaatcatctatgttctcctaattggtatactgcacc 30274790  T
Q  253 tattcttatgaatgatt 269  Q
    |||||||||||||||||    
T  30274791 tattcttatgaatgatt 30274807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 22021246 - 22021130
Alignment:
Q  161 aacagaaaataaagatatgtttggaaaatatatggagagata----agactaggtctttcgaaccattgatgttcccctaattggtatactgcacctatt 256  Q
    |||||||||||||||||  ||||| ||| ||| ||||||| |    |||  |||||||||||| |||  ||||| |||||||||||||||||||||||||    
T  22021246 aacagaaaataaagatagttttggtaaagataaggagagagagatgagataaggtctttcgaatcatctatgttaccctaattggtatactgcacctatt 22021147  T
Q  257 cttatgaatgattctct 273  Q
    |||||||||||||||||    
T  22021146 cttatgaatgattctct 22021130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 22630969 - 22630906
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  22630969 taggtctttcgaatcatttatgttcccttaattggtatactgcacctattcttatgaatgattc 22630906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 16179255 - 16179189
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16179255 taggtctttcgaatcatcgatgttcccctaattggtatactgcatatattcttatgaatgattctct 16179189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 257
Target Start/End: Complemental strand, 33310947 - 33310745
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  33310947 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 33310854  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||||||||||    
T  33310853 taaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatact 33310755  T
Q  248 gcacctattc 257  Q
    ||| ||||||    
T  33310754 gcaactattc 33310745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 43723992 - 43723926
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  43723992 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 43723926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 31585874 - 31585979
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||    
T  31585874 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattcttatga 31585973  T
Q  264 atgatt 269  Q
    ||||||    
T  31585974 atgatt 31585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 40781763 - 40781698
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  40781763 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 40781698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 43723871 - 43723766
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||    
T  43723871 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattcttatga 43723772  T
Q  264 atgatt 269  Q
    ||||||    
T  43723771 atgatt 43723766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 37937196 - 37937259
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  37937196 taggtctttcgaatcatcgatgttcccctaattggtataccgcacctattcttgtgaatgattc 37937259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 6827063 - 6826997
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  6827063 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttg 6826997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 38015799 - 38015585
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  38015799 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 38015706  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||| | ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||| ||||||    
T  38015705 taaatttaaataacagaaaatga-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattgatatact 38015607  T
Q  248 gcacctattcttatgaatgatt 269  Q
    | |||||||| ||| |||||||    
T  38015606 gaacctattcgtattaatgatt 38015585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 43207855 - 43207929
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  43207855 gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattcttatgaatgatt 43207929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 42368531 - 42368588
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  42368531 actgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 42368588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 10601036 - 10600977
Alignment:
Q  214 ttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  10601036 ttcgaatcatcgatgttcccctaattgatatactgcacctatttttatgaatgattctct 10600977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 12219924 - 12219865
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||    
T  12219924 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatg 12219865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 45493152 - 45493199
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45493152 atgtttccctaattggtatactgcacctattcttatgaatgattctct 45493199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 45499182 - 45499261
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| ||||||||    
T  45499182 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagt 45499261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 45500894 - 45500941
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45500894 atgtttccctaattggtatactgcacctattcttatgaatgattctct 45500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 17877234 - 17877168
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||||||| ||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||    
T  17877234 taggtctttcgaatcatcgatgctcccctaattgatatattgcacctattcttattaatgattctct 17877168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 5666688 - 5666584
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  ||||||||||||  ||  |||||||||||||||||||||||||| |||||||||||    
T  5666688 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat-atctatgttcccctaattggtatactgcacatattcttatga 5666590  T
Q  264 atgatt 269  Q
    ||||||    
T  5666589 atgatt 5666584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 6826898 - 6826837
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||| ||||||||||||||||||||||||||| ||||||||||||    
T  6826898 aggtctttcgaatcatctatgctcccctaattggtatactgcacctatttttatgaatgatt 6826837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 31585762 - 31585819
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  31585762 actgtgttaatctcaatttagaaataaagtaaatatctaggatgtataaattattttg 31585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 45457347 - 45457228
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| |||  | ||||||||||||| |||||||    
T  45457347 aaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatctaagttcccctaattgttatactg 45457249  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||||||||| ||| |||||||    
T  45457248 cacctattcgtattaatgatt 45457228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 1386399 - 1386459
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| ||||||| |||||||    
T  1386399 taggtctttcgaatcatctatgttcccctaattggtatactgcacttattcttgtgaatga 1386459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 36808359 - 36808481
Alignment:
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    |||||| ||||||| ||||||||||| |||  ||||||||| ||| ||||||| |  |||  ||||||||| || | || | |||||||||||||||| |    
T  36808359 ataaaattaaataaacagaaaataaa-atagttttggaaaagataaggagagagatgagatcaggtctttcaaatcctttaagttcccctaattggtaca 36808457  T
Q  246 ctgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||    
T  36808458 ctgcacctattcttatgaatgatt 36808481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 40259116 - 40259176
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    |||||| |||||| |||  |||||||||||||||||||||||||||||||||| |||||||    
T  40259116 taggtcgttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatga 40259176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 43207715 - 43207767
Alignment:
Q  64 gttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  43207715 gttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 43207767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 40677583 - 40677662
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||||||||||||||||| ||||| ||| ||||| || |||||||||||||| |||| ||||||  |||| ||||||||    
T  40677583 ccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaaattattttagtgcctgaggcagt 40677662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 13137180 - 13137114
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||| ||||||||||| ||| |||||| ||||||||||| || |||||| |||||||    
T  13137180 tccacgaggactgtcttaatctcaatttagcaataaagtaaatatttagaatatataaattattttg 13137114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 16790686 - 16790783
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctatt 256  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  16790686 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16790783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 265
Target Start/End: Original strand, 9966229 - 9966404
Alignment:
Q  92 tatttaggatgtataaaa--tattttgat--gcccgaggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaa 187  Q
    ||||||||||||||||||  ||||||| |  || | |||||||||||| | ||||||| || ||||||||| ||||| |||||||||||  ||||  ||     
T  9966229 tatttaggatgtataaaagttattttgttttgctctaggcagttgattgg-tttgattaca-taaaagtaactaacataaaataaagattggttttaaag 9966326  T
Q  188 atatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    | ||| | ||||||| |||  | |||||| ||| |||  |||||||||||||||||||| |||||||||||||||||||    
T  9966327 a-ataagagagagatgagatcaagtcttttgaatcatctatgttcccctaattggtatattgcacctattcttatgaat 9966404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 13137081 - 13137017
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattctt 259  Q
    ||||||| |||  |||||||||||| |||  |||||||||||||||||||||| |||||||||||    
T  13137081 gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattctt 13137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 27266929 - 27266857
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||| |||  ||||||||| || |||  |||||||||||||||||||| |||| ||||||||||||||||    
T  27266929 gagagatgagatcaggtctttcaaatcatctatgttcccctaattggtataatgcagctattcttatgaatga 27266857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 15470750 - 15470684
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||| ||||| ||| |||||  | |||||||||||||| |||| |||||||    
T  15470750 tccacgaggactgtgttaatttcaatttagcaataaggttaatatttaggatgtgtaaattattttg 15470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 17874585 - 17874627
Alignment:
Q  228 gttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  17874585 gttcccctaattggtacactgcacctattcttgtgaatgattc 17874627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 3875415 - 3875363
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattctt 259  Q
    ||||||||||||| ||   |||||||||||||||||||||||||| |||||||    
T  3875415 taggtctttcgaatcacctatgttcccctaattggtatactgcacatattctt 3875363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 15470629 - 15470546
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  15470629 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 15470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 1503246 - 1503304
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  1503246 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 1503304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 1506450 - 1506508
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  1506450 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 1506508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 5666806 - 5666745
Alignment:
Q  53 acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatatttt 115  Q
    |||||||||| ||| |||||||| ||| |||||| ||| ||||||||||||||||| ||||||    
T  5666806 acgaggactgcgttgatctcaatttagcaataaagtaa-tatttaggatgtataaattatttt 5666745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 13518596 - 13518538
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  13518596 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 13518538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 45454156 - 45454098
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| ||||    
T  45454156 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaa 45454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 45457444 - 45457386
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| ||||    
T  45457444 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaa 45457386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 5666738 - 5666695
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  5666738 gatttgatttgattgca-taaaattaaataacataaaataaagat 5666695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 6826992 - 6826949
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  6826992 gatttgatttgattgca-taaaattaaataacataaaataaagat 6826949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 43723921 - 43723878
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  43723921 gatttgatttgattgca-taaaattaaataacataaaataaagat 43723878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 5538592 - 5538815
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  5538592 tccatgaggactgtgttaatttcaatttagaaataaagtaaatatttaggatgtataaaatattttgatgcctggggtagttgatttgatttgattgcaa 5538691  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  5538692 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagatgagactaggtcttttgaatcattgatgttccccaaattggtatactgc 5538791  T
Q  250 acctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||    
T  5538792 acctattcttatgaatgattctct 5538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 18721109 - 18721319
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| ||||||| |          || ||||||||||||||||| |    
T  18721109 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttgttt---------gtagatttgatttgattgca-t 18721198  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatgga-gagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| |||||||||||||||   |||||||||||||  | ||||| ||||||||||||||||| |||  |||||||||||||||||||||||    
T  18721199 aaaattaaataaacagaaaataaagatagtgttggaaaatatatataagagatgagactaggtctttcgaatcatctatgttcccctaattggtatactg 18721298  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  18721299 cacctattcttatgaatgatt 18721319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 23644118 - 23643897
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||  | ||| ||||||     | |||||||||||     
T  23644118 tccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttttccctaggcag-----tagatttgattgc- 23644025  T
Q  149 ataaaagtaaat-aacagaaaataaagatatgtttggaaaatatatg--gagagataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    |||||| ||||| |||||||||||||||||  ||||||||| ||| |  ||||||| | |  ||||| |||||| ||| |||||||||||||||||||||    
T  23644024 ataaaattaaataaacagaaaataaagatagttttggaaaagataaggagagagatgatatcaggtcgttcgaatcatcgatgttcccctaattggtata 23643925  T
Q  246 ctgcacctattcttatgaatgattctct 273  Q
    |||||| | ||  |||||||||||||||    
T  23643924 ctgcacttctttgtatgaatgattctct 23643897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 49 - 273
Target Start/End: Original strand, 22173753 - 22173965
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| |           | |||||||||||||||||    
T  22173753 ttccacgaggacagtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgattgca 22173841  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
     ||||| |||||||||| ||||||||||  | || ||||||||   ||||||| |||  |||||||||||| ||| |||||||||||||||||||||||     
T  22173842 -taaaattaaataacaggaaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatacta 22173940  T
Q  249 cacctattcttatgaatgattctct 273  Q
    ||||||||  ||| ||| |||||||    
T  22173941 cacctatttgtattaattattctct 22173965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 16954072 - 16953858
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||||||||||||||||||||  |  |||||  | |||||||||||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  16954072 ccacgaggactgtgttaatctcaattcaacaataacgttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 16953978  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| |||||||||||| |||||||||  ||||||||  ||| | ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  16953977 aaaattaaataacagaatataaagatagttttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 16953878  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  16953877 acctattcttatgaatgatt 16953858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 45155098 - 45155311
Alignment:
Q  57 ggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagt 156  Q
    |||| |||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  ||||||||||||| | |||||||     ||| ||||| |    
T  45155098 ggaccgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgcccgaggcagtagttttgatt-----gca-taaaatt 45155191  T
Q  157 aaataa-cagaaaataaagatatgtttggaaaatatatggagaga--taagactaggtctttcgaaccattgatgttcccctaattggtatactgcacct 253  Q
    |||||| |||||||||||||||  ||||||||| ||| |||||||  | |||  |||||||||||| |||  |||||||||||||||||||| |||||||    
T  45155192 aaataaacagaaaataaagatagttttggaaaagataaggagagagctgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacct 45155291  T
Q  254 attcttatgaatgattctct 273  Q
    ||||||||||||||||||||    
T  45155292 attcttatgaatgattctct 45155311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 5980114 - 5980240
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||  ||| | ||||||| ||||||||| |||| |     
T  5980114 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttgctctaggcagtagatttgattagatttc- 5980212  T
Q  149 ataaaagtaaataacagaaaataaagat 176  Q
    |||||| ||||||||| |||||||||||    
T  5980213 ataaaattaaataacataaaataaagat 5980240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 14422040 - 14421826
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |       | || |  |||||||||||||| |    
T  14422040 tccacgaggactgtgttaatctcaatttagtaataaagtaaatatttaggatgtataaattattttgtt------tgtagat--tttgatttgattgc-a 14421950  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatat----atggagagataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    ||||| |||||||||| |||| ||||||  ||||||||| ||    |  ||||||| |||  |||||||||||| |||  ||||||||||||||| ||||    
T  14421949 taaaattaaataacaggaaat-aagatagttttggaaaagataaagagagagagatgagatcaggtctttcgaatcatctatgttcccctaattgatata 14421851  T
Q  246 ctgcacctattctta-tgaatgatt 269  Q
    ||||||||||||||| |||||||||    
T  14421850 ctgcacctattcttactgaatgatt 14421826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 33883268 - 33883392
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagaga--taagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||||||||||  ||||||||| |||  ||||||  | ||  || |||||||||| |||  ||||| |||||||||||||||||    
T  33883268 aaaagtaaataacagaaaataaagatagttttggaaaagataaagagagaggtgagtttaagtctttcgaatcatctatgtttccctaattggtatactg 33883367  T
Q  249 cacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||    
T  33883368 cacctattcttatgaatgattctct 33883392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 269
Target Start/End: Original strand, 43681707 - 43681908
Alignment:
Q  61 tgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaat 160  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| |||| ||||||| |           | ||||||||||||||||| ||||| |||||    
T  43681707 tgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttgtttt---------tagatttgatttgattgca-taaaattaaat 43681796  T
Q  161 aac-agaaaataaagatatgtttggaaaatatat--ggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    ||  ||||||||||||||  |||| |||||||||  |||||||| ||||||||||||||||  | |  | |||||||||||||||||||| ||| |||||    
T  43681797 aaatagaaaataaagatagttttgaaaaatatatatggagagatgagactaggtctttcgagtcttcaaggttcccctaattggtatactacacttattc 43681896  T
Q  258 ttatgaatgatt 269  Q
    ||||||||||||    
T  43681897 ttatgaatgatt 43681908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 25231372 - 25231158
Alignment:
Q  58 gactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagta 157  Q
    |||||||||||||||||| ||| |||||  | ||||||||||||| ||||| |||||  ||||| || ||||| | || ||||     ||| ||||  ||    
T  25231372 gactgtgttaatctcaatttagcaataagtttaatatttaggatggataaattatttcaatgcctgaagcagtagtttagatt-----gca-taaagtta 25231279  T
Q  158 aataa-cagaaaataaagatatgtttggaaaatatatggagagata----agactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    ||||| |||||||||||||||  ||||||||| |||  |||||| |    |||  |||||||||||| |||  |||||||||||||||||||||||||||    
T  25231278 aataaacagaaaataaagataattttggaaaagataaagagagagagttgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacc 25231179  T
Q  253 tattcttatgaatgattctct 273  Q
    |||||||||||||||||||||    
T  25231178 tattcttatgaatgattctct 25231158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 269
Target Start/End: Original strand, 25591310 - 25591517
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaa 158  Q
    ||||||||||||||||| |||  ||||  | |||||||||||||| |||| ||||||  |||| |||| ||| | |||||||||    ||  ||||||||    
T  25591310 actgtgttaatctcaatttagcgataaggttaatatttaggatgtgtaaattattttagtgcctgaggtagtagttttgatttg----cataaaaagtaa 25591405  T
Q  159 ataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||| ||||| |||||||||  ||||||||| |    ||||||| |||  |||| ||||||| |||  |||||||||||||||||||||||||||||||     
T  25591406 ataaacagaatataaagatagttttggaaaagaataagagagatgagatcaggtgtttcgaatcatctatgttcccctaattggtatactgcacctattt 25591505  T
Q  258 ttatgaatgatt 269  Q
    ||||||||||||    
T  25591506 ttatgaatgatt 25591517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 21279747 - 21279811
Alignment:
Q  209 ggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21279747 ggtctttcgaatcatcgatgttcccctaattggtatactgcacctattcttatgaatgattctct 21279811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 268
Target Start/End: Original strand, 18824218 - 18824431
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  18824218 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 18824311  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||| ||||||| ||| |||||||||||||||||||||||    
T  18824312 taaatttaaataacagaaaataa-gatagttttggaaaagaaaaggagagagatgagatcaggtatttcgaatcatcgatgttcccctaattggtatact 18824410  T
Q  248 gcacctattcttatgaatgat 268  Q
    |||||||||| ||| ||||||    
T  18824411 gcacctattcgtattaatgat 18824431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 20887721 - 20887616
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  20887721 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 20887622  T
Q  264 atgatt 269  Q
    ||||||    
T  20887621 atgatt 20887616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 23597504 - 23597439
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  23597504 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 23597439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 33419799 - 33419736
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  33419799 taggtctttcgaatcatttatgttcccctaatttgtatactgcacctattcttatgaatgattc 33419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 17931136 - 17931058
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||| ||| ||||||||||||| ||| |||||| || ||||||||||| |||||||||||||||||||||||||||    
T  17931136 gagagatgagattaggtctttcgaatcatcgatgtttccgtaattggtatattgcacctattcttatgaatgattctct 17931058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 273
Target Start/End: Complemental strand, 10664156 - 10663976
Alignment:
Q  90 aatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaa 188  Q
    |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      |||||| ||||||| ||||| |||||||||  ||||||||     
T  10664156 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagttttggaaag 10664062  T
Q  189 tatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
     | | | ||||||| |||  |||||||||||  |||  ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10664061 aaaaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattcttatgaatgattctct 10663976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 14589540 - 14589659
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||| ||||||| ||||  ||||||||| | | ||||||| |  ||| ||||| ||||||| ||| ||||||||||||||||||||||||    
T  14589540 aaaagtaaataacataaaataa-gatagttttggaaaagacaaggagagagatgagattaggtatttcgaatcatcgatgttcccctaattggtatactg 14589638  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||||||||| ||| |||||||    
T  14589639 cacctattcgtattaatgatt 14589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 268
Target Start/End: Original strand, 18825711 - 18825924
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | |||| ||||||||  ||||    |||||| |     
T  18825711 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcctgaggcagta-attt----tgattgta- 18825804  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||||||||||    
T  18825805 taaatttaaataacagaaaataa-gatagttttggaaaagaaaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatact 18825903  T
Q  248 gcacctattcttatgaatgat 268  Q
    |||||||||| ||| ||||||    
T  18825904 gcacctattcgtattaatgat 18825924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 12583197 - 12583089
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattg---atgttcccctaattggtatactgcacctattctta 260  Q
    |||||||| |||| || || ||||||||   ||||||| |||| |||||||||||| |||     |||||||||||||||||||||||||||||||||||    
T  12583197 agaaaatatagatttggttagaaaatatgaagagagatgagaccaggtctttcgaatcatgatctatgttcccctaattggtatactgcacctattctta 12583098  T
Q  261 tgaatgatt 269  Q
    |||||||||    
T  12583097 tgaatgatt 12583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 36710600 - 36710674
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  36710600 gagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattcgtattaatgatt 36710674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 20887841 - 20887776
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||    
T  20887841 ccacaaggactgtgttaatctcaatttagaaataaaggaaatatttaggatgtataaattattttg 20887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 38248376 - 38248441
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    |||||||||||| |||  |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  38248376 aggtctttcgaatcatctatgttcccctaattggtatattgcacatattcttatgaatgattctct 38248441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 10498190 - 10498250
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||    
T  10498190 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatga 10498250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 12583318 - 12583252
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||| ||||||||||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  12583318 tccacgaggactatgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttg 12583252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 25594621 - 25594695
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  || ||||||||||| |||||||||||||||||||||||||||||    
T  25594621 gagagatgagatcaggtctttcgaatcatctatcttcccctaattagtatactgcacctattcttatgaatgatt 25594695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 23619340 - 23619397
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  23619340 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaa 23619397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 5584330 - 5584422
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  5584330 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 8911804 - 8911729
Alignment:
Q  195 gagagataagactaggtctttcgaaccat-tgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||  ||||||||||||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8911804 gagagataagtttaggtctttcgaatcctctga-gttcccctaattggtatactgcacctattcttgtgaatgattc 8911729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 2560695 - 2560634
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||| |  ||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  2560695 aggtctttcaagtcatcgatgtttctctaattggtatactgcacctattcttatgaatgatt 2560634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 31284865 - 31284757
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  |||||| |||||| |||  ||||||||||||||||||||| ||||||||||    
T  31284865 aataacagaaaataaagattggttttaagaata-agagagagatgagtttaggtcattcgaatcatctatgttcccctaattggtataccgcacctattc 31284767  T
Q  258 ttatgaatga 267  Q
    || |||||||    
T  31284766 ttgtgaatga 31284757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 5980292 - 5980351
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||| |||  |||||||| ||||||||||||| |||||||||||||| ||||||    
T  5980292 gtctttcgaatcatctatgttcccttaattggtatactacacctattcttatggatgatt 5980351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 12516429 - 12516480
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattctt 259  Q
    |||||||||||| |||  || |||||||||||||||||||||||||||||||    
T  12516429 aggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 12516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 30645779 - 30645721
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| ||||||| |||||||| ||||    
T  30645779 tccacgaggactgtgttaatctcaacttagcaataaagtaaatatataggatgtgtaaa 30645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 44027069 - 44027131
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||| |||  ||||||||||||||| |||| ||||| ||||||| |||||||||    
T  44027069 taggtctttcgaatcatctatgttcccctaattgatataatgcacatattcttgtgaatgatt 44027131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 10664248 - 10664191
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| ||||    
T  10664248 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaa 10664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 13196999 - 13196938
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||| || |||  |||||| | ||||||||||||||||| |||||||||||||||||    
T  13196999 aggtctttcaaatcatctatgttctcttaattggtatactgcacttattcttatgaatgatt 13196938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 5584247 - 5584319
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatatttt 115  Q
    |||||||| |||||||||||||||||| ||||| ||| |||||  | |||||||||||||| |||| ||||||    
T  5584247 tatcgttctcacgaggactgtgttaatttcaatttagcaataaggttaatatttaggatgtgtaaattatttt 5584319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 31986579 - 31986523
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  31986579 cacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 31986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 21332497 - 21332722
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21332497 tccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagaatgaataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 21332596  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaa-atatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||||||||||||||||||||||||||  ||||||||   ||| | ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||    
T  21332597 taaaagtaaataacagaaaataaagatagttttggaaaggaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 21332696  T
Q  248 gcacctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||||    
T  21332697 gcacctattcttatgaatgattctct 21332722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 21335516 - 21335740
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21335516 tccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagaatgtataaaatatttt-atgcccgaggcagttgatttgatttgattgcaa 21335614  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaa-atatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||||||||||||| ||||||||||||  ||||||||   ||| | ||||||| |||| | |||||||||| |||  |||||||||||||| |||||||    
T  21335615 taaaagtaaataacataaaataaagatagttttggaaaggaataagcgagagatgagaccaagtctttcgaatcatctatgttcccctaatttgtatact 21335714  T
Q  248 gcacctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||||    
T  21335715 gcacctattcttatgaatgattctct 21335740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 42063229 - 42063006
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgatt 145  Q
    ||||||||||| |||||||||||||  || |||||| |||||||||| |||||||||||  | ||||||  |||| | |||||||||||||| |||||||    
T  42063229 ccacgaggactatgttaatctcaattcagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggcagttgatttg-tttgatt 42063131  T
Q  146 gcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtat 244  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||| ||||||||||||| ||| |||  ||||| |||||||||||||    
T  42063130 gcaataaaagtaaataacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaatcatctatgtttccctaattggtat 42063031  T
Q  245 actgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||    
T  42063030 actgcacctattcttatgaatgatt 42063006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 22936763 - 22936975
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||| ||||||| |          || ||||||||||||||||| |    
T  22936763 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttgttt---------gtagatttgatttgattgca-t 22936852  T
Q  151 aaaagtaaataa-cagaaaa-taaagatatgtttggaaaatat--atggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||| ||||||| ||||||| ||||||||  ||||||||||||  |||||||||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  22936853 aaaattaaataaacagaaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatac 22936952  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  22936953 tgcacctattcttatgaatgatt 22936975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 4099348 - 4099555
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||| |||||| ||||||| |           | |||||||||||||||||     
T  4099348 tccacgaggactgtgttaatatcaatttagcaataaagtaaatatttaggatatataaattattttgtt-----------tagatttgatttgattgca- 4099435  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| ||||||||| |||||||||||  | || ||||||||   || |||| ||||||||||||||||| |||  ||||||||||||||||||||||||    
T  4099436 taaaattaaataacataaaataaagattcggttagaaaatatgaagaaagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgc 4099535  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  4099536 acctattcttatgaatgatt 4099555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 14375723 - 14375833
Alignment:
Q  161 aacagaaaataaagatatgtttggaaaatat--atggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattct 258  Q
    |||||||||||||||||  ||||||||||||  |||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||||||| |    
T  14375723 aacagaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctatttt 14375822  T
Q  259 tatgaatgatt 269  Q
    |||||||||||    
T  14375823 tatgaatgatt 14375833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 31864015 - 31863799
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||| |  ||| |  ||||| |||| || | |||| ||||          
T  31864015 ccacgaggactgagttaatctcaatttagcaataaagtaaatatttaggatgtataaatttcttttagttgccctaggc-gtagttttggtttgc----- 31863922  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| || || |||||||||   |||||||  ||| | ||||||| ||||||||||||||||| |||  ||||||||||||||| |||||    
T  31863921 ataaaattaaataaacataatataaagatagagttggaaagaataagagagagatgagactaggtctttcgaatcatctatgttcccctaattgatatac 31863822  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  31863821 tgcacctattcttatgaatgatt 31863799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 269
Target Start/End: Original strand, 14015960 - 14016176
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgc 147  Q
    ||||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     ||    
T  14015960 ttccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gc 14016054  T
Q  148 aataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    | ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||||||||    
T  14016055 a-taaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtata 14016152  T
Q  246 ctgcacctattcttatgaatgatt 269  Q
     ||||||||||| ||| |||||||    
T  14016153 gtgcacctattcgtattaatgatt 14016176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 22131422 - 22131310
Alignment:
Q  161 aacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattctta 260  Q
    ||||||||||||||||   ||  ||||||||   ||||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||    
T  22131422 aacagaaaataaagattgattaagaaaatatggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattcgta 22131323  T
Q  261 tgaatgattctct 273  Q
    |||||||||||||    
T  22131322 tgaatgattctct 22131310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 7625403 - 7625187
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||    
T  7625403 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca 7625309  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  ||||||||| || ||| ||||||||||||||||||||||    
T  7625308 taaaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcaaatcatcgatgttcccctaattggtatac 7625210  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    | ||||||||  ||| |||||||    
T  7625209 tacacctatttgtattaatgatt 7625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 7271328 - 7271262
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  7271328 tccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgtataaattattttg 7271262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 43492056 - 43491840
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||| ||||| |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||  ||||| || |||     | | ||||||||| |    
T  43492056 ccacaaggaccgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttgccctagacag-----tagttttgattgc-a 43491963  T
Q  150 taaaagtaaat-aacagaaaataaagatatgtttggaaaa-tatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    ||||| ||||| || ||||||||||||||  |||||||||  ||| | ||||||| |||  |||||||||||| |||  ||||||||||||| ||||||     
T  43491962 taaaattaaataaatagaaaataaagatagttttggaaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaatcggtatat 43491863  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||| ||||| ||||||||||||    
T  43491862 tgcatctatttttatgaatgatt 43491840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 41876577 - 41876642
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  41876577 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 41876642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 269
Target Start/End: Original strand, 26752608 - 26752739
Alignment:
Q  139 tttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttccccta 236  Q
    |||||||||| ||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||| |||||||||||    
T  26752608 tttgattgca-taaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatttatgttccccta 26752706  T
Q  237 attggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||| |||||||||||||||    
T  26752707 attggtatactgcaccttttcttatgaatgatt 26752739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 41306442 - 41306565
Alignment:
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggaga--gataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    |||||| ||||||| |||||||||||||||  ||||||||| |||  ||||  |||||||   ||||||||||| |||  ||||||||||||||||||||    
T  41306442 ataaaattaaataaacagaaaataaagataattttggaaaagataaagagagagataagatcgggtctttcgaatcatctatgttcccctaattggtata 41306541  T
Q  246 ctgcacctattcttatgaatgatt 269  Q
    ||||||||||| ||||||||||||    
T  41306542 ctgcacctatttttatgaatgatt 41306565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 26907431 - 26907494
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  26907431 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgattc 26907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 30066621 - 30066393
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |          || |||||||||||||||| |    
T  30066621 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtt---------tgtagatttgatttgattgc-a 30066532  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatata----tgg---------------agagataagactaggtctttcgaaccattgatgtt 230  Q
    ||||| ||||||||| |||||||||||  |  | |||||||||    |||               |||||| |||  |||||||||||| |||  |||||    
T  30066531 taaaattaaataacataaaataaagattcggcttgaaaatatagatttggttagaaaatatgaaaagagatgagatcaggtctttcgaatcatctatgtt 30066432  T
Q  231 cccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30066431 cccctaattggtatactgcacctattcttatgaatgatt 30066393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 7271161 - 7271100
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  7271161 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 7271100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 20055919 - 20055858
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20055919 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 20055858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 33552266 - 33552205
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  33552266 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 33552205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 34832073 - 34832008
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  34832073 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 34832008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 28441314 - 28441366
Alignment:
Q  90 aatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttg 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28441314 aatatttaggatgtataaaatattttgatgcccgagggagttgatttgatttg 28441366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 40583395 - 40583331
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattct 271  Q
    ||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  40583395 taggtctttcgaatcctcgatgttctcctaattggtatactgcacctattcttatgaatgattct 40583331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 23044288 - 23044225
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  23044288 taggtcttttgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgattc 23044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 41876699 - 41876798
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  41876699 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaat 41876798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 28787142 - 28787263
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||| |||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||| |    |    | |||||||||||||||||| |    
T  28787142 tccacgaggaccgtgttagtctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttgtag----atttgatttgatttgattgc-a 28787236  T
Q  150 taaaagtaaataacagaaaataaagat 176  Q
    ||||| ||||||||| |||||||||||    
T  28787237 taaaattaaataacataaaataaagat 28787263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 18952820 - 18952773
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  18952820 atgttcccctaattggtatactgcacatattcttatgaatgattctct 18952773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 10629513 - 10629423
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatt 140  Q
    |||| ||||||||||||||||||||| ||  |||||||| | |||||||||||| |||| |||||| |||||  ||||||| |||||||||    
T  10629513 tccatgaggactgtgttaatctcaatttaacaataaaattattatttaggatgtgtaaattattttaatgcctaaggcagtagatttgatt 10629423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 12058420 - 12058525
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  12058420 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 12058518  T
Q  258 ttatgaa 264  Q
    || ||||    
T  12058519 ttgtgaa 12058525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 26895568 - 26895642
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  |||||||||||||||||||  |||||||||||||||||||||||    
T  26895568 gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatgttgcacctattcttatgaatgatt 26895642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 33552431 - 33552365
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||| |||||||    
T  33552431 tccacgaggactgtgttaatctcaatttaacaatagagtaaatatttaggatgtataaattattttg 33552365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 12088104 - 12088047
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  12088104 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaa 12088047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 34132959 - 34133016
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  34132959 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaa 34133016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 34143190 - 34143247
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  34143190 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaa 34143247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 11959154 - 11959214
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||    
T  11959154 taggtctttcgaatcatctatgttcccctaattggtataccgcacctattcttgtgaatga 11959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 39192638 - 39192574
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||| |||||| ||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  39192638 cacgaagactgtattaatctcaatttagcaataaattaaatatttaggatgtataaattattttg 39192574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 34831953 - 34831852
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccat-tgatgttcccctaattggtatactgcacctattcttatg 262  Q
    |||||||| |||| || || ||||||||   ||||||| ||| ||||||||||||| | | ||| |||||||||||||||||| ||||||||||||||||    
T  34831953 agaaaatatagatttggttagaaaatatgaagagagatgagattaggtctttcgaatcttctga-gttcccctaattggtataatgcacctattcttatg 34831855  T
Q  263 aat 265  Q
    |||    
T  34831854 aat 34831852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 39192472 - 39192410
Alignment:
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||| |||  ||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  39192472 tctttcgaatcatcaatgttcccctaattgatataatgcacgtattcttatgaatgattctct 39192410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 41306314 - 41306401
Alignment:
Q  14 cactaaatactatcgaagtagtnnnnnnnntatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgt 103  Q
    ||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||| ||| |||||  ||||||||||||||||    
T  41306314 cactaaatactatcgaagtagtaaaaa---tatcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgt 41306401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 21915324 - 21915211
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa-ccattgatgttcccctaattggtatactgc 249  Q
    |||||||||||| ||||||||| ||| || |||||||| |||  |||||||  |||||||||||||||| || |||| |||||||||||||||| ||| |    
T  21915324 aaaagtaaataatagaaaataa-gat-tgattggaaaagatagagagagatgtgactaggtctttcgaatcctttga-gttcccctaattggtacactac 21915228  T
Q  250 accta-ttcttatgaat 265  Q
    ||||| |||||||||||    
T  21915227 acctatttcttatgaat 21915211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 37215340 - 37215129
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||     |||||  |||||||||||||||| |||| |  ||| |  ||||| ||||||| | |||| ||||          
T  37215340 ccacgaggactgtgttaatctcaat-----aataacgtaaatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgc----- 37215251  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| | | ||||||||||||| |||  | |||||| |||||||||||     
T  37215250 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgaaattaggtctttcgaatcatctaagttccc-taattggtatat 37215152  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  37215151 tgcacctattcttatgaatgatt 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31575609 - 31575552
Alignment:
Q  161 aacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa 219  Q
    |||| ||||||||| | ||||||||||| |||||||||||| |||||||||||||||||    
T  31575609 aacaaaaaataaagtt-tgtttggaaaagatatggagagatgagactaggtctttcgaa 31575552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 28787330 - 28787367
Alignment:
Q  232 ccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28787330 ccctaattggtatactgcacctattctgatgaatgatt 28787367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 40915985 - 40916050
Alignment:
Q  56 aggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcc 121  Q
    |||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| |||||    
T  40915985 aggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcc 40916050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 17664678 - 17664646
Alignment:
Q  226 atgttcccctaattggtatactgcacctattct 258  Q
    |||||||||||||||||||||||||||||||||    
T  17664678 atgttcccctaattggtatactgcacctattct 17664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 26292910 - 26292874
Alignment:
Q  234 ctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||||||||||||||||| ||||||||    
T  26292910 ctaattggtatactgcacctattcttatcaatgattc 26292874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 32838180 - 32838116
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatatt 113  Q
    ||||||||||||||||||||||||||| ||  |||||  | |||||||||||||| |||| ||||    
T  32838180 ttccacgaggactgtgttaatctcaatttatcaataaggttaatatttaggatgtgtaaattatt 32838116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 33320818 - 33320854
Alignment:
Q  137 gatttgattgcaataaaagtaaataacagaaaataaa 173  Q
    |||||| ||||||||||||||||||||||||||||||    
T  33320818 gatttggttgcaataaaagtaaataacagaaaataaa 33320854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 2453587 - 2453536
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggat 101  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||||||||||    
T  2453587 tccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggat 2453536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 3195386 - 3195328
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  3195386 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 3195328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 19686475 - 19686417
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  19686475 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 19686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 30764530 - 30764472
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  30764530 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 30764472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 34652581 - 34652639
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  34652581 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 34652639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 17748567 - 17748526
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||||||||||| ||||||||| || |||||||    
T  17748567 atgttcccctaattggtataccgcacctatttttgtgaatga 17748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 9690990 - 9690950
Alignment:
Q  134 tttgatttgattgcaataaaa-gtaaataacagaaaataaa 173  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  9690990 tttgatctgattgcaataaaaagtaaataacagaaaataaa 9690950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 39192569 - 39192526
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  39192569 gatttgatttgattgca-taaaattaaataacataaaataaagat 39192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 8e-64; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 15432380 - 15432158
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | ||||||||||||||| |    
T  15432380 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttgatttgattgca-t 15432282  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||||| |||||||||||||| |||||||||||||    ||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||    
T  15432281 aaaattaaataaacagaaaataaagatttgtttggaaaataataagagagatgagactaggtctttcgagtcatcgatgttcccctaattggtatactgc 15432182  T
Q  250 acctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||    
T  15432181 acctattcttatgaatgattctct 15432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 49 - 273
Target Start/End: Complemental strand, 18911807 - 18911578
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatat--tttga--tgcc-cgaggcagttgatttgatttga 143  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||| | |  |||||  |||| | |||||||||||| | |||||    
T  18911807 ttccacgaggactgtgttaatctcaatttagcaataaaaaaaatatttaggatgaataaattttcttttgaattgccactaggcagttgattgg-tttga 18911709  T
Q  144 ttgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggt 242  Q
    || ||||||| |||||||||||||||||||||||  ||||||||||||||  ||||||| ||||||||||||| ||| |||  |||||||||||||||||    
T  18911708 ttacaataaaggtaaataacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaatcatctatgttcccctaattggt 18911609  T
Q  243 atactgcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||||||||    
T  18911608 atactgcacctattcttatgaatgattctct 18911578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 37103030 - 37103254
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgat 144  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||  | ||||||  |||| | |||||||||||| | ||||||    
T  37103030 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggcagttgattgg-tttgat 37103128  T
Q  145 tgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatgga-gagataagactaggtctttcgaaccattgatgttcccctaattggta 243  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||  | ||||| |||||| |||||||||| |||  ||||| ||||||||||||    
T  37103129 tgcaataaaagtaaataatagaaaataaagatagttttggaaaatatatataagagatgagactaagtctttcgaatcatctatgtttccctaattggta 37103228  T
Q  244 tactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||    
T  37103229 tactgcacctattcttatgaatgatt 37103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 5681726 - 5681511
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgat-gcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||| ||||||||||    | |||||| ||||||||||||||||||||| ||||||| | ||||  |||||| ||||||||| |||||||    
T  5681726 tccacgaggactgtattaatctcaa----gcaataaagtaaatatttaggatgtataaattattttgtttgccctgggcagtagatttgattggattgca 5681631  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
     ||||| ||||||||| ||||||||||||  ||||||||| ||| |||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  5681630 -taaaattaaataacataaaataaagatagttttggaaaagataaggagagatgagactaggtctttcgaatcatcgatgttcccttaattggtatactg 5681532  T
Q  249 cacctattcttatgaatgatt 269  Q
     | ||||||||||||||||||    
T  5681531 aaactattcttatgaatgatt 5681511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 12238558 - 12238349
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||| |||||| ||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |           | ||||||||||||||||| |    
T  12238558 ccacgatgactgtattaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttta---------tagatttgatttgattgca-t 12238469  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||||||| ||||||||||||  ||||||||||||||  ||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||    
T  12238468 aaaattaaataacataaaataaagatagttttggaaaatatatatgagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgc 12238369  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  12238368 acctattcttatgaatgatt 12238349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 27014561 - 27014347
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||  |||| |||||||| | |||| ||||      ||    
T  27014561 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttagtgcctgaggcagtagttttggtttg-----cat 27014467  T
Q  151 aaaagtaaat-aacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||| |||| || |||||||||  ||||||||| |    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  27014466 aaaattaaataaacaaaatataaagatagttttggaaaagaataagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 27014367  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  27014366 acctattcttatgaatgatt 27014347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 34017609 - 34017824
Alignment:
Q  54 cgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaa 153  Q
    |||| ||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      |||||    
T  34017609 cgagcactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaa 34017703  T
Q  154 agtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    | |||||||||||| ||||||||| |||||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||||||    
T  34017704 attaaataacagaatataaagata-gtttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacc 34017802  T
Q  253 tattcttatgaatgattctctg 274  Q
    ||||||||||||||||| ||||    
T  34017803 tattcttatgaatgattttctg 34017824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 5706693 - 5706476
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaata-ttttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| || ||||| |||| |  |||| ||||| |||||||| | |||| ||||      |    
T  5706693 ccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgc-----a 5706599  T
Q  150 taaaagtaaataa-cagaaaataaagatatgtttggaaaatatat--ggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||||  |||||||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  5706598 taaaattaaataaacagaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatac 5706499  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  5706498 tgcacctattcttatgaatgatt 5706476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 50 - 270
Target Start/End: Original strand, 3797637 - 3797847
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |       | |  |  |||||||||||||||     
T  3797637 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt------gtatat--tttgatttgattgca- 3797727  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| |||||||||||||||||  |||  ||||||||| |||  ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  3797728 taaaattaaataacagaaaataac-atagttttggaaaagatagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 3797826  T
Q  250 acctattcttatgaatgattc 270  Q
    |||||||||||| ||||||||    
T  3797827 acctattcttattaatgattc 3797847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 35510291 - 35510074
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||||||  ||||| |||||||||| ||| |||| ||||     
T  35510291 tccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttgtttgccctaggcagttga-ttggtttgtttgc- 35510194  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||| ||| ||||||||||||||| || ||  || ||  |  ||||||| ||  ||||||||||||| |||  || |||||||||||||||||||     
T  35510193 ataaaagt-aatgacagaaaataaagat-tggttttaagattaagagagagatgagtttaggtctttcgaatcatctatattcccctaattggtatacta 35510096  T
Q  249 cacctattcttatgaatgattc 270  Q
    ||||||||||||||||||||||    
T  35510095 cacctattcttatgaatgattc 35510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 269
Target Start/End: Original strand, 33408154 - 33408355
Alignment:
Q  61 tgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaat 160  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |          || ||||||||||||||||| ||||| |||||    
T  33408154 tgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt---------gtagatttgatttgattgca-taaaattaaat 33408243  T
Q  161 aa-cagaaaataaagatatgtttggaaaatatatggagag--ataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    || || ||||||||||||  ||||||||||||||||||||  || ||  ||||||||||||| | |  | ||||||||||| ||||||||||||||||||    
T  33408244 aaacataaaataaagatagttttggaaaatatatggagagtgatgagtttaggtctttcgaatcctctaagttcccctaatcggtatactgcacctattc 33408343  T
Q  258 ttatgaatgatt 269  Q
    ||||||||||||    
T  33408344 ttatgaatgatt 33408355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 19821014 - 19820811
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |           | ||||||||||||| |||     
T  19821014 tccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgatagca- 19820927  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||||    |||||| |||||||||||  | || ||||||||   ||||||| |||  |||||||||||| |||   |||||||||||||||||||||||    
T  19820926 taaaa----ataacataaaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctttgttcccctaattggtatactgc 19820831  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  19820830 acctattcttatgaatgatt 19820811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 34319740 - 34319955
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  ||| | |||||||| |||| | |||||||     |||     
T  34319740 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttttagtgcccgagacagtagttttgatt-----gcat 34319834  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
     |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||| |||||||||||||    
T  34319835 aaaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatact 34319933  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  34319934 gcacctattcgtattaatgatt 34319955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 51 - 266
Target Start/End: Complemental strand, 5670876 - 5670664
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      ||    
T  5670876 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttg-----cat 5670782  T
Q  151 aaaagtaaat-aacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||| ||||||| |||||||||   |||||||  ||| | |||||||  ||  |||||||||||| |||  |||||||||||||||||||||||    
T  5670781 aaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactg 5670682  T
Q  249 cacctattcttatgaatg 266  Q
    ||| ||||||| ||||||    
T  5670681 cacatattcttgtgaatg 5670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 51 - 266
Target Start/End: Complemental strand, 5673194 - 5672982
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      ||    
T  5673194 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttg-----cat 5673100  T
Q  151 aaaagtaaat-aacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||| ||||||| |||||||||   |||||||  ||| | |||||||  ||  |||||||||||| |||  |||||||||||||||||||||||    
T  5673099 aaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactg 5673000  T
Q  249 cacctattcttatgaatg 266  Q
    ||| ||||||| ||||||    
T  5672999 cacatattcttgtgaatg 5672982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 44808778 - 44808993
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  44808778 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gcat 44808872  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggaga--gataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
     |||||||||||||||||||||| ||||  ||||||||| | | |||||  ||| |||  || ||||||||| ||| ||||||| ||||||||||||| |    
T  44808873 aaaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagaaagatgagatcagatctttcgaatcatcgatgttctcctaattggtatatt 44808971  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  44808972 gcacctattcgtattaatgatt 44808993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 52006464 - 52006569
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||| |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  52006464 agaaaatatagatttggttagaaaatatgaagagagatgagaccaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 52006563  T
Q  264 atgatt 269  Q
    ||||||    
T  52006564 atgatt 52006569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 33927272 - 33927056
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | || |   ||  ||||    
T  33927272 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtaggttgg---tg--tgca 33927178  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      |||||||||||||| ||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||||||||||||||||    
T  33927177 taaaaagtaaataacataaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatac 33927079  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||||||||| ||| |||||||    
T  33927078 tgcacctattcgtattaatgatt 33927056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 15445299 - 15445412
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  15445299 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaa 15445398  T
Q  265 tgattctctgcttc 278  Q
    ||||| ||| ||||    
T  15445399 tgattttctacttc 15445412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 38283302 - 38283367
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  38283302 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 38283367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 56195824 - 56195611
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||| ||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     ||| |    
T  56195824 cacgaggattgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca-t 56195731  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||||||||||||||||||    
T  56195730 aaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactg 56195632  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||||||||| ||| |||||||    
T  56195631 cacctattcgtattaatgatt 56195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 266
Target Start/End: Original strand, 40616629 - 40616843
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  |  ||||||||||||| |||| |  ||| |  ||||| ||||||| | |||| ||||          
T  40616629 ccacgaggactgtgttaatctcaatttagcaataacgttgatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgc----- 40616723  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||||||||||||    
T  40616724 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatac 40616823  T
Q  247 tgcacctattcttatgaatg 266  Q
    ||||||||||||||||||||    
T  40616824 tgcacctattcttatgaatg 40616843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 269
Target Start/End: Original strand, 52530842 - 52530973
Alignment:
Q  139 tttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttccccta 236  Q
    |||||||||| ||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  |||||||||||    
T  52530842 tttgattgca-taaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttccccta 52530940  T
Q  237 attggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||||    
T  52530941 attggtatactgcacctattcttatgaatgatt 52530973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 3720660 - 3720594
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  3720660 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 3720594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 39501806 - 39501732
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39501806 gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 39501732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 27676988 - 27677093
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  27676988 agaaaatatagatttggttagaaaatatgaagagagatgagataaggtctatcgaatcatttatgttcctctaattggtatactgcacctattcttatga 27677087  T
Q  264 atgatt 269  Q
    ||||||    
T  27677088 atgatt 27677093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 38283422 - 38283527
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||    
T  38283422 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattcttatga 38283521  T
Q  264 atgatt 269  Q
    ||||||    
T  38283522 atgatt 38283527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 40902896 - 40902961
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  40902896 ccacgaggactgtgttaatctcaatttagtaataaagtaaatatttaggatgtataaattattttg 40902961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 40903016 - 40903121
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||    
T  40903016 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttagaatcatctatgttcccctaattggtatactgcacctattcttatga 40903115  T
Q  264 atgatt 269  Q
    ||||||    
T  40903116 atgatt 40903121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 11195821 - 11195758
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  11195821 taggtctttcgaatcatctatgttcccctaattggtatactgcacatattcttatgaatgattc 11195758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 46955406 - 46955520
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| | | |||||| ||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||     
T  46955406 aataacagaaaataaagattggttttaagaataaaag-agagatgagattaggtcttttgaatcatcgatgttcccctaattggtatactgcacctattt 46955504  T
Q  258 ttatgaatgattctct 273  Q
     ||| |||||||||||    
T  46955505 gtattaatgattctct 46955520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 12786422 - 12786356
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||||||    
T  12786422 tccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttg 12786356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 19827721 - 19827655
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  19827721 tccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 19827655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 19864481 - 19864555
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  19864481 gagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacctattcttatgaatgatt 19864555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 24150830 - 24150756
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||    
T  24150830 gagagatgagatcaggtctttcgaatcatctgtgttcccctaattggtatactgcacctattcttatgaatgatt 24150756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 29325122 - 29324909
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  29325122 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 29325029  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||| ||||||||||| |    
T  29325028 taaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatcagatcaggtctttcgaatcatcgatgttccc-taattggtatatt 29324931  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||| ||| |||||||    
T  29324930 gcacctattcatattaatgatt 29324909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 39498467 - 39498393
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  39498467 gagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacctattcttatgaatgatt 39498393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 40795160 - 40795086
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||  |||||||||||| |||  ||||| |||||||||||||||| |||||||||||||||||||||    
T  40795160 gagagataagatcaggtctttcgaatcatctatgtttccctaattggtatactacacctattcttatgaatgatt 40795086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 40795312 - 40795246
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  40795312 tccacgaagactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 40795246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 19827604 - 19827499
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||| ||||| |||||||||||    
T  19827604 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtataatgcacatattcttatga 19827505  T
Q  264 atgatt 269  Q
    ||||||    
T  19827504 atgatt 19827499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 27676876 - 27676933
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  27676876 actgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 27676933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 15429790 - 15429894
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||| ||| |||  |||||||||||||||||||||| ||||||||||||||||    
T  15429790 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattcttatgaa 15429889  T
Q  265 tgatt 269  Q
    |||||    
T  15429890 tgatt 15429894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 15436404 - 15436508
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||| ||| |||  |||||||||||||||||||||| ||||||||||||||||    
T  15436404 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattcttatgaa 15436503  T
Q  265 tgatt 269  Q
    |||||    
T  15436504 tgatt 15436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24043957 - 24044017
Alignment:
Q  56 aggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  24043957 aggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 24044017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 21419934 - 21419871
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| ||| ||||||||||||||||||||||  ||||||||||| ||||||||||    
T  21419934 taggtctttcgaatcatcgatgttcccctaattggtataccacacctattcttgtgaatgattc 21419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 25962204 - 25962141
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  25962204 taggtctttcgaatcatcgatgttctcctaattggtataccgcacctattcttgtgaatgattc 25962141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 40493343 - 40493406
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| ||| ||||||||||||||||||||||  ||||||||||| ||||||||||    
T  40493343 taggtctttcgaatcatcgatgttcccctaattggtataccacacctattcttgtgaatgattc 40493406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 48415524 - 48415567
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  48415524 atgttcccctaattggtatactgcacctattcttatgaatgatt 48415567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 48637806 - 48637589
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||| |||| ||| |||||  ||||||||||||||||| ||| |  ||| |  ||||| ||||||| | |||| ||||          
T  48637806 ccacgaggactgtgttaatcccaatttagcaataaggtaaatatttaggatgtaaaaatttcttttagttgccctaggcagtagttttggtttgc----- 48637712  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| |||||  ||||||||   ||||| |  ||| | ||||||| |||  |||||||||||| |||  ||||| |||||||||||||||    
T  48637711 ataaaattaaataaacagaatgtaaagatagagttggagagaataagagagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatac 48637612  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||||||| |||||||||||||    
T  48637611 tgcacctatgcttatgaatgatt 48637589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 12783062 - 12782988
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  ||||||| |||||||||||||||||||||||||||| |||||||    
T  12783062 gagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattcttataaatgatt 12782988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 15812100 - 15812174
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||  ||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  15812100 gagagatgagatcaggtctttcgatacatcgatgttcccctaattggtatactgcacctattcgtattaatgatt 15812174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 52006343 - 52006409
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| |||  ||||| |||||||||||||| |||||| |||||||    
T  52006343 tccacgaggactgtgttaatctcaatttagcgataaagtaaatatttaggatatataaattattttg 52006409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 18673058 - 18673115
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||    
T  18673058 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaa 18673115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 48415331 - 48415403
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||| ||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||    
T  48415331 tatcgttctcacaaggactgtgttaatctcaatttagaaat-aagtaaatatttaggatgtataaattattttg 48415403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 256
Target Start/End: Complemental strand, 56199153 - 56198950
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | |||||||| |||| | || |   ||  ||||    
T  56199153 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgagacagtaggttgg---tg--tgca 56199059  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagact--aggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      |||||||||||| ||||||||| ||||  ||||||||| | | ||||||| | ||    |||||||||||| ||| ||||||||||||||||||||||    
T  56199058 taaaaagtaaataatagaaaataa-gatagttttggaaaagacaaggagagagatgaaatcaggtctttcgaatcatcgatgttcccctaattggtatac 56198960  T
Q  247 tgcacctatt 256  Q
    ||||||||||    
T  56198959 tgcacctatt 56198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 15429668 - 15429798
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||  ||||||||||| ||  |||||| ||||||||||||||||||||| ||||||| |           | |||||||||||||||| |    
T  15429668 tccacgaggactgatttaatctcaatttatcaataaagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgattgc-a 15429755  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatata 192  Q
    ||||| |||||||||| ||||||||||  |||| |||||||||    
T  15429756 taaaattaaataacaggaaataaagattcgttttgaaaatata 15429798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 15436282 - 15436412
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||  ||||||||||| ||  |||||| ||||||||||||||||||||| ||||||| |           | |||||||||||||||| |    
T  15436282 tccacgaggactgatttaatctcaatttatcaataaagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgattgc-a 15436369  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatata 192  Q
    ||||| |||||||||| ||||||||||  |||| |||||||||    
T  15436370 taaaattaaataacaggaaataaagattcgttttgaaaatata 15436412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 3719250 - 3719207
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  3719250 atgtttccctaattggtatactgcacctattcttatgaatgatt 3719207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 24044136 - 24044179
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  24044136 atgttcccctaattggtatactacacctattcttatgaatgatt 24044179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 30392714 - 30392651
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||| || |||  |||||||||||||||||||| |||||||||| |||||||||||||    
T  30392714 taggtctttccaatcatatatgttcccctaattggtatattgcacctatttttatgaatgattc 30392651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 44164925 - 44164866
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||| |||  |||||||||||||||||||||| ||| |||||||||||||||||    
T  44164925 gtctttcgaatcatctatgttcccctaattggtatactacacatattcttatgaatgatt 44164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 19859486 - 19859556
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    ||||||| |||  |||||||||||| |||  ||| |||||||||||||||||||||| |||||||||||||    
T  19859486 gagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacatattcttatgaat 19859556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 29544850 - 29544912
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||| ||| |||||||| |||||||||||| |||||||||| || |||||||||    
T  29544850 taggtctttcgaatcatcgatgttcctctaattggtatattgcacctattattgtgaatgatt 29544912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 15164337 - 15164277
Alignment:
Q  209 ggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||| ||| ||| |||| |||||||||||| ||| |||||||||||||||||||    
T  15164337 ggtctttcgaatcatcgatattcctctaattggtatattgcccctattcttatgaatgatt 15164277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 53009553 - 53009597
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||    
T  53009553 atgttcccctaattagtatactgcacctattcttgtgaatgattc 53009597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 49270822 - 49270763
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||| |||  || ||| ||||||||||||||||||| |||||||||||||||||    
T  49270822 gtctttcgaatcatctatattctcctaattggtatactgcacatattcttatgaatgatt 49270763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10386238 - 10386180
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | |||||||||||||| ||||    
T  10386238 tccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggatgtgtaaa 10386180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 15445177 - 15445243
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||  ||||||||||| ||| |||||| ||||||||||| ||||| ||| |||||||    
T  15445177 tccacgaggactgatttaatctcaatttagcaataaagtaaatatttagaatgtacaaattattttg 15445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 53094633 - 53094587
Alignment:
Q  228 gttcccctaattggtatactgcaccta-ttcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  53094633 gttcccctaattggtatactgcacctatttcttacgaatgattctct 53094587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 44165087 - 44165026
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||  ||||||||||| ||| |||||| |||||||||| |||||||||| |||||||    
T  44165087 gaggactgatttaatctcaatttagtaataaagtaaatatttatgatgtataaattattttg 44165026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10248120 - 10248062
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  10248120 tccacgaggactgtgttaatctcaaactagcaataaagttaatatctaggatgtgtaaa 10248062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 15405045 - 15405119
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  | ||||||||||||| |||||||||||||||  ||| |||||||    
T  15405045 gagagatgagatcaggtctttcgaatcatctaagttcccctaattgatatactgcacctatttgtattaatgatt 15405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 18860072 - 18860014
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  18860072 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 18860014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 8877393 - 8877543
Alignment:
Q  124 aggcagttgatttgatttgattgcaataaaagt--aaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaacc 221  Q
    ||||||| |||||| |||||||||| ||||| |  ||| ||| |||| ||||||| || || ||||||||  | |||||| |||  ||||||||| || |    
T  8877393 aggcagtagatttggtttgattgca-taaaattttaaagaacggaaagtaaagatttgattagaaaatatgag-agagatgagatcaggtctttcaaatc 8877490  T
Q  222 attgatgttcccctaattggtatactgcaccta-ttcttatgaatgattctct 273  Q
    ||  | ||||||||| || |||||||||||||| ||||||||||||| |||||    
T  8877491 atctaagttcccctatttagtatactgcacctatttcttatgaatgactctct 8877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 24150973 - 24150916
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| ||||    
T  24150973 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaa 24150916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 49270977 - 49270924
Alignment:
Q  63 tgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||| ||| |||||| | |||||||| |||||||||| |||||||    
T  49270977 tgttaatctcaatttagcaataaagtgaatatttatgatgtataaattattttg 49270924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 3720589 - 3720546
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  3720589 gatttgatttgattgca-taaaattaaataacataaaataaagat 3720546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 12786351 - 12786308
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  12786351 gatttgatttgattgca-taaaattaaataacataaaataaagat 12786308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 26060802 - 26060742
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaat 110  Q
    |||||||||||| ||||||||||||  ||| |||||  | ||||||||| |||||||||||    
T  26060802 tccacgaggactatgttaatctcaagttagcaataaggttaatatttagaatgtataaaat 26060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 44165021 - 44164978
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||    
T  44165021 gatttgatttgattgc-ataaaattaaataacaggaaataaagat 44164978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 1950269 - 1950493
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgatt 145  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||  | ||||||  |||| | |||||||||||| | |||||||    
T  1950269 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggcagttgattgg-tttgatt 1950367  T
Q  146 gcaataaaagtaaataacagaaaataaagatatgtttggaaaa-tatatgga-gagataagactaggtctttcgaaccattgatgttcccctaattggta 243  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||  | ||||| ||||||||||||||||| |||  ||||||||||||||||||    
T  1950368 gcaataaaagtaaataacagaaaataaagatagttttggaaaaatatatataagagatgagactaggtctttcgaatcatctatgttcccctaattggta 1950467  T
Q  244 tactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||    
T  1950468 tactgcacctattcttatgaatgatt 1950493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 269
Target Start/End: Original strand, 27536346 - 27536569
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgattt 141  Q
    |||||||| |||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |  ||| | ||||||||||||| | |||||||     
T  27536346 tatcgttcacacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt- 27536444  T
Q  142 gattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaatt 239  Q
        |||  |||||||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| |||||||||||||||    
T  27536445 ----gcataaaaagtaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaatt 27536539  T
Q  240 ggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||| ||| |||||||    
T  27536540 ggtatactgcacctattcgtattaatgatt 27536569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 6070781 - 6070991
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| | |         | |||||||||||||||||      
T  6070781 ccacaaggattgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttc---------tagatttgatttgattgcata 6070871  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggag--agataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||||||||||||| ||||  ||||||||| | | ||||  |||| |||  |||| ||||||| ||| ||||||||||||||||||||| ||    
T  6070872 aaaattaaataacagaaaataa-gatagttttggaaaagacaaggagcgagatgagatcaggtttttcgaatcatcgatgttcccctaattggtatattg 6070970  T
Q  249 cacctattcttatgaatgatt 269  Q
    ||||||||| ||| |||||||    
T  6070971 cacctattcgtattaatgatt 6070991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 2794528 - 2794309
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| |||||| ||| | |||||||| | |||| ||||      ||    
T  2794528 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgtctgaggcagtagttttggtttgc-----at 2794434  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  | | | ||||||| |||  |||||||||||  |||  ||||| |||||||||||||||||    
T  2794433 aaaattaaataaacagaatataaagatagttttggaaagaaaaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactg 2794334  T
Q  249 cacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||    
T  2794333 cacctattcttatgaatgattctct 2794309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 28111357 - 28111142
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| ||||||  || | |||||||| | |||| ||||      ||    
T  28111357 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttagtgtctgaggcagtagttttggtttgc-----at 28111263  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  || ||||||||| |||  |||||||||||||||||||||||    
T  28111262 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcagatctttcgaatcatctatgttcccctaattggtatactg 28111163  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  28111162 cacctattcttatgaatgatt 28111142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 20399154 - 20398939
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||| ||||||||||||||||| ||| |||||| | ||||| |||||||| |||| |  ||| | |||| |||||||| | |||| ||||      |    
T  20399154 ccacgagaactgtgttaatctcaatttagcaataaagttaatatctaggatgtgtaaatttcttttagtgcctgaggcagtagttttggtttgc-----a 20399060  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    ||||| ||||||||| ||||||||||||   |||||||  ||| | ||||||| |||  |||||||||||  |||  |||||||||||||||||||||||    
T  20399059 taaaattaaataacataaaataaagatagagttggaaagaataagagagagatgagatcaggtctttcgagtcatctatgttcccctaattggtatactg 20398960  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  20398959 cacctattcttatgaatgatt 20398939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 269
Target Start/End: Original strand, 37183685 - 37183901
Alignment:
Q  49 ttccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgc 147  Q
    ||||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     ||    
T  37183685 ttccacgaggactgtgttaatctcaatttagcaataatgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gc 37183779  T
Q  148 aataaaagtaaataacagaaaataaagatatgtttggaaaatata-tg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    | ||||  ||||||||||||||||| ||||  ||||||||| | | || ||||||| |||  |||||||||||| ||| |||||||||||||||||||||    
T  37183780 a-taaatttaaataacagaaaataa-gatagttttggaaaagacaatgagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtata 37183877  T
Q  246 ctgcacctattcttatgaatgatt 269  Q
    |||||||||||| ||| |||||||    
T  37183878 ctgcacctattcgtattaatgatt 37183901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 259
Target Start/End: Original strand, 3796650 - 3796854
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    |||||||||||||||||||||||||  || |||||  | |||||||||||||| |||| ||||||  |||  |||||||| | |||| ||||    ||      
T  3796650 ccacgaggactgtgttaatctcaattcagcaataagtttaatatttaggatgtgtaaattattttagtgcatgaggcagtagttttggtttg----cata 3796745  T
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||||||||||||| ||||||| ||||   |||||||  ||| | ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  3796746 aaaagtaaataacataaaataa-gatagagttggaaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgc 3796844  T
Q  250 acctattctt 259  Q
    ||||||||||    
T  3796845 acctattctt 3796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 45941607 - 45941502
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  45941607 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 45941508  T
Q  264 atgatt 269  Q
    ||||||    
T  45941507 atgatt 45941502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 2405821 - 2405755
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  2405821 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 2405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 21434383 - 21434499
Alignment:
Q  139 tttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa-ccattgatgttcccctaa 237  Q
    |||||||||| ||||| ||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||| |||||| ||  ||| |||| |||||    
T  21434383 tttgattgca-taaaattaaataacagaaagtaaagatttgcttggaaaatatatggagagatgagactaggtcattcgaatcctatga-gttctcctaa 21434480  T
Q  238 ttggtatactgcacctatt 256  Q
    |||||| ||| ||||||||    
T  21434481 ttggtacactacacctatt 21434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 267
Target Start/End: Complemental strand, 42022940 - 42022728
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||| |          || |||||||||||||||| |    
T  42022940 tccacgaggactgtgttaatctcaatttaacaataaagtaaatatttaggatgtataaattattttgtt---------tgtagatttgatttgattgc-a 42022851  T
Q  150 taaaagtaaat-aacagaaaataaagatatgtttggaaaatatatg----gagagataagactaggtctttcgaa-ccattgatgttcccctaattggta 243  Q
    ||||| ||||| |||| |||||||| |||  ||||||||| ||| |    ||||||| ||||||| ||||||||| ||  ||| ||||| |||||  |||    
T  42022850 taaaattaaataaacataaaataaatatagttttggaaaagataaggagagagagatgagactagatctttcgaatcctctga-gttcctctaatcagta 42022752  T
Q  244 tactgcacctattcttatgaatga 267  Q
    | ||||||||||||||||||||||    
T  42022751 tgctgcacctattcttatgaatga 42022728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 45960568 - 45960782
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | ||||||||||||| | |||||||     |||     
T  45960568 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-----gca- 45960661  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatg--gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    ||||  ||||||||||||||||| ||||  ||||||||| | | |  ||||||| |||  |||||||||||| ||| ||||||||||||||||||||| |    
T  45960662 taaatttaaataacagaaaataa-gatagttttggaaaagacaagaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtataat 45960760  T
Q  248 gcacctattcttatgaatgatt 269  Q
    |||||||||  ||| |||||||    
T  45960761 gcacctatttgtattaatgatt 45960782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 49498461 - 49498535
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| ||| ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  49498461 gagagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattcttatgaatgatt 49498535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 31205054 - 31204924
Alignment:
Q  139 tttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttccccta 236  Q
    |||||||||| ||||  ||||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| ||| ||||||||||||    
T  31205054 tttgattgca-taaatttaaataacagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtctttcgaatcatcgatgttccccta 31204957  T
Q  237 attggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||| ||| |||||||    
T  31204956 attggtatactgcacctattcgtattaatgatt 31204924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 45941727 - 45941662
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  45941727 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 45941662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 21107225 - 21107329
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||    
T  21107225 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcacctaattggtatactgcacctattcttatgaa 21107324  T
Q  265 tgatt 269  Q
    |||||    
T  21107325 tgatt 21107329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 21111092 - 21111196
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||    
T  21111092 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattcttatgaa 21111191  T
Q  265 tgatt 269  Q
    |||||    
T  21111192 tgatt 21111196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 21114432 - 21114536
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||    
T  21114432 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattcttatgaa 21114531  T
Q  265 tgatt 269  Q
    |||||    
T  21114532 tgatt 21114536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 23021888 - 23021960
Alignment:
Q  196 agagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgat 268  Q
    |||||| ||| ||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||    
T  23021888 agagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattcttatgaatgat 23021960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 29643043 - 29643259
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||| |||||| | | | | || ||||| |||| ||||||  || |||||||||| | ||||   ||  |||      
T  29643043 tccacgaggactgtgttaatctcaatttagcaataaagttattttctaagatgtgtaaattattttagtgtccgaggcagtaggtttg---tg--tgctt 29643137  T
Q  150 taaaagtaaataacagaaaataaagatat---gtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
     ||||||||||||||||||||||||| |    ||||  | |||| |  ||||||| ||  ||||||||||||| ||| ||||||||||||| | ||||||    
T  29643138 aaaaagtaaataacagaaaataaagaaagttggttttaagaata-agagagagatgagtttaggtctttcgaatcatcgatgttcccctaactagtatac 29643236  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||    
T  29643237 tgcacctattcttatgaatgatt 29643259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 21110970 - 21111036
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  21110970 tccacgaggactgtgttactctcaatttagcaataaagtaaatatttaggatgtataaattattttg 21111036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 41058114 - 41058180
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  41058114 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttg 41058180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 41058235 - 41058340
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||  ||| ||||||||||||| |||  ||||||| ||||||||||| ||||||||||||||||||    
T  41058235 agaaaatatagatttggttagaaaatatgaagagagaagagattaggtctttcgaatcatctatgttcctctaattggtatgctgcacctattcttatga 41058334  T
Q  264 atgatt 269  Q
    ||||||    
T  41058335 atgatt 41058340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 2405700 - 2405594
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||  ||||||||||||||||||||||||||| |||    
T  2405700 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttttcctaattggtatactgcacctattcttgtga 2405601  T
Q  264 atgattc 270  Q
    |||||||    
T  2405600 atgattc 2405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 27354920 - 27354986
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    |||||||||| || | | ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  27354920 taggtctttcaaatcctcgatgttctcctaattggtatattgcacctattcttatgaatgattctct 27354986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 905663 - 905724
Alignment:
Q  209 ggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||| |||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  905663 ggtctttcgaatcatctatgtttccctaattggtatactgcacttattcttatgaatgattc 905724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 16060886 - 16060992
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg--gagagataagactaggtctttcgaacca-ttgatgttcccctaattggtatact 247  Q
    |||| ||||||||||||||||||||| |||||||||||   |||  ||||||| ||||||||||||||||| || ||||| || |||||||||||| |||    
T  16060886 aaaattaaataacagaaaataaagat-tgtttggaaaagtaatggagagagatgagactaggtctttcgaatcatttgat-tttccctaattggtacact 16060983  T
Q  248 gcacctatt 256  Q
    |||||||||    
T  16060984 gcacctatt 16060992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 49852955 - 49853016
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  49852955 gaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 49853016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 266
Target Start/End: Original strand, 21018402 - 21018502
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||| |||||||| ||||||||||||||||    
T  21018402 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaatttgtatactgaacctattcttatgaat 21018501  T
Q  266 g 266  Q
    |    
T  21018502 g 21018502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 16056720 - 16056826
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatg--gagagataagactaggtctttcgaa-ccattgatgttcccctaattggtatact 247  Q
    |||| ||||||||||||||||||||| |||||||||||  ||||  ||||||| |||||||||||||||||  | ||||| |||||||||||| || |||    
T  16056720 aaaattaaataacagaaaataaagat-tgtttggaaaagttatggagagagatgagactaggtctttcgaatactttgat-ttcccctaattgatacact 16056817  T
Q  248 gcacctatt 256  Q
     ||||||||    
T  16056818 acacctatt 16056826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 11666879 - 11666962
Alignment:
Q  110 tattttgatgcccgaggcagttgatttgatttgattgc-aataaaagtaaataacagaaaataaagatatgtttggaaaatata 192  Q
    ||||||| ||||| ||||||| |||||| ||||||||| || |||| ||||||||||||| ||||||| || || |||||||||    
T  11666879 tattttgttgccctaggcagtagatttggtttgattgcaaaaaaaattaaataacagaaagtaaagatttgattagaaaatata 11666962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 21018279 - 21018345
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||||| |||||| ||  |||||| ||||||||||| || |||||| |||||||    
T  21018279 tccacgaggactgtgttaacctcaatttaacaataaagtaaatatttagaatatataaattattttg 21018345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 23021747 - 23021800
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||||| ||||||||||||| ||| ||| || |||||||||||||||||||||    
T  23021747 gaggactctgttaatctcaatttagcaatcaagtaaatatttaggatgtataaa 23021800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 49498324 - 49498381
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||||||| ||||||||||||||| ||| |||||  |||||||||||||||| ||||    
T  49498324 ccacgaggattgtgttaatctcaatttagcaataaggtaaatatttaggatgtgtaaa 49498381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 673052 - 673108
Alignment:
Q  213 tttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  ||||| |||||||||||||||||||||||||||| | |||||||    
T  673052 tttcgaatcatctatgtttccctaattggtatactgcacctattcttgtaaatgatt 673108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 23441095 - 23441174
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagt 130  Q
    ||||| ||||||||||||| ||||| | | ||||| || |||||||||||||| |||| ||||||  |||| ||||||||    
T  23441095 ccacggggactgtgttaatttcaatttggcaataagattaatatttaggatgtgtaaattattttagtgcctgaggcagt 23441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 7635849 - 7635783
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa 219  Q
    ||||||||||| |||||||||||| |  |||| ||||| |||  ||||||| |||||||||||||||||    
T  7635849 aaaagtaaatatcagaaaataaagtt--gtttagaaaagatagagagagattagactaggtctttcgaa 7635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 16062132 - 16062238
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatgga--gagataagactaggtctttcgaacca-ttgatgttcccctaattggtatact 247  Q
    |||| ||||||| ||||||||||||| |||||| ||||  ||||||  ||||| ||||||||||||||||| || ||||| || || ||||||||| |||    
T  16062132 aaaattaaataatagaaaataaagat-tgtttgaaaaagttatggaaagagatgagactaggtctttcgaatcatttgat-tttccataattggtacact 16062229  T
Q  248 gcacctatt 256  Q
     ||||||||    
T  16062230 acacctatt 16062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 34065082 - 34065149
Alignment:
Q  154 agtaaata-acagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaa 219  Q
    |||||||| ||| ||||||||||| ||||||||||| ||||||||||| |  |||||||||||||||||    
T  34065082 agtaaatagacaaaaaataaagat-tgtttggaaaagatatggagagagatgagactaggtctttcgaa 34065149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 2405750 - 2405707
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  2405750 gatttgatttgattgca-taaaattaaataacataaaataaagat 2405707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 269
Target Start/End: Complemental strand, 518 - 269
Alignment:
Q  14 cactaaatactatcgaagtagtnnnnnnnntatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatat 112  Q
    ||||||||||||||||||||||        ||||||||| ||||| ||||||||||||||||| |||||||||| |||||||||| |||||| |||||||    
T  518 cactaaatactatcgaagtagtaaaaa---tatcgttcccacgagaactgtgttaatctcaatttagaaataaagtaaatatttaagatgtaaaaaatat 422  T
Q  113 tttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaat-aacagaaaataaagatatgtttggaaaatatatggagagataagactaggt 211  Q
    ||||||||||||||||||||||||||||||      |||||| ||||| ||||||| |||||||||  ||||||||| |    ||||||  |||  || |    
T  421 tttgatgcccgaggcagttgatttgatttg-----cataaaattaaataaacagaatataaagatagttttggaaaagaataagagagacgagatcagat 327  T
Q  212 ctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  326 ctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgatt 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 62821 - 62601
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgatt 145  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||  | ||||||  |||| | |||||||||||| | |||||||    
T  62821 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggcagttgattgg-tttgatt 62723  T
Q  146 gcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    ||||||||||||||||||||||||||||||||  ||||||||  | | | ||||| | ||  |||||||||||| |||  ||||||||||||||||||||    
T  62722 gcaataaaagtaaataacagaaaataaagatagttttggaaagaaaaag-agagaga-gatcaggtctttcgaatcatctatgttcccctaattggtata 62625  T
Q  246 ctgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||    
T  62624 ctgcacctattcttatgaatgatt 62601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 64005 - 63946
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||||||| ||||||    
T  64005 taggtctttcgaatcatctatgttcccctaatcggtatactgcacctattcttgtgaatg 63946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 5222 - 5436
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||  |||| |||||||| | |||| ||||      ||    
T  5222 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttagtgcctgaggcagtagttttggtttg-----cat 5316  T
Q  151 aaaagtaaat-aacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||| |||| || |||||||||  ||||||||| |    ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||    
T  5317 aaaattaaataaacaaaatataaagatagttttggaaaagaataagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgc 5416  T
Q  250 acctattcttatgaatgatt 269  Q
    ||||||||||||||||||||    
T  5417 acctattcttatgaatgatt 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 51 - 259
Target Start/End: Complemental strand, 211 - 1
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaa--tattttga--tgcc-cgaggcagttgatttgatttgatt 145  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||  | ||||||  |||| | |||||||||||| | |||||||    
T  211 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaaagttcttttgaattgccactaggcagttgattgg-tttgatt 113  T
Q  146 gcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtata 245  Q
    |||||||||||||||||||||||||||||||| |||| | ||| | |  ||||||  |||  |||||||||||| |||  ||||||||||||||||||||    
T  112 gcaataaaagtaaataacagaaaataaagata-gttttggaaagaaaaagagaga-gagatcaggtctttcgaatcatctatgttcccctaattggtata 15  T
Q  246 ctgcacctattctt 259  Q
    ||||||||||||||    
T  14 ctgcacctattctt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 293318 - 293103
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||  |          || ||||||||||||||| | |    
T  293318 ccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttttttt---------gtagatttgatttgattgta-t 293229  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
    | || ||||||| |||||||||||||||  ||||||||| |||  |||||| |  |||  | |||||||||| |||  ||||||||||||||||||||||    
T  293228 ataattaaataaacagaaaataaagataattttggaaaagataaagagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatact 293129  T
Q  248 gcacctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||||    
T  293128 gcacctattcttatgaatgattctct 293103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 7538 - 7750
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaataaa 153  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |  ||| | ||||||||||||| | || |   ||  ||||  |||    
T  7538 gaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatttcttttagtgcccgaggcagtaggttgg---tg--tgcataaaa 7632  T
Q  154 agtaaataacagaaaataaagatatgtttggaaaata-tatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcac 251  Q
    ||||||||||||||||||||||||  |||| |||| | || | ||||||| |||  |||||||||||| |||  |||||||||||||||||||| |||||    
T  7633 agtaaataacagaaaataaagatagttttgaaaaagaataggagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcac 7732  T
Q  252 ctattcttatgaatgatt 269  Q
    ||||||||||||||||||    
T  7733 ctattcttatgaatgatt 7750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 261
Target Start/End: Complemental strand, 2797 - 2593
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| |       ||||   ||||||||| ||||||     
T  2797 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt------gcag---atttgatttaattgcac 2707  T
Q  150 taaaagtaaataa-cagaaaataaagatatgtttggaaaatatat--ggagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
     |||| ||||||| ||||||||||| |||   || ||||||||||  |||||||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  2706 -aaaattaaataaacagaaaataaaaatagtattagaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatac 2608  T
Q  247 tgcacctattcttat 261  Q
    |||||||||||||||    
T  2607 tgcacctattcttat 2593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 3182 - 3320
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgt 229  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||  ||||||||||||||  ||||||| ||||||||||||||||  |||  ||||    
T  3182 gatttgatttgattgca-taaaattaaataaacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtctttcgagtcatcaatgt 3280  T
Q  230 tcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  3281 tcccataattggtataatgcacctattcttatgaatgatt 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 266
Target Start/End: Original strand, 23384573 - 23384787
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |  ||| |  ||||| ||||||| | |||| ||||          
T  23384573 ccacgaggactgtgttaatttcaatttagaaataaagtaaatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgc----- 23384667  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| ||||| |||||||||   |||||||  ||| | ||||||| ||| ||||||||||||  |||  |||||||||||||||||||||    
T  23384668 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagattaggtctttcgattcatctatgttcccctaattggtatac 23384767  T
Q  247 tgcacctattcttatgaatg 266  Q
    ||||||||||||||||||||    
T  23384768 tgcacctattcttatgaatg 23384787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 9954263 - 9954053
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||||||||||||||||| ||| |||||  | |||||||||||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  9954263 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 9954169  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    |||| ||||||| ||||| |||||||||  ||||||||| |    ||||||| |||  || ||||||||| |||  ||||||||||||||||||||||||    
T  9954168 aaaattaaataaacagaatataaagatagttttggaaaagaataagagagatgagatcagctctttcgaatcatctatgttcccctaattggtatactgc 9954069  T
Q  250 acctattcttatgaat 265  Q
    ||||||||||||||||    
T  9954068 acctattcttatgaat 9954053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 269
Target Start/End: Original strand, 3596609 - 3596819
Alignment:
Q  58 gactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgcaataaaag 155  Q
    |||||||||||||||||| ||| |||||  ||||||||||||||||||||| |  ||| |  || || ||||||| | |||| ||||      ||||||     
T  3596609 gactgtgttaatctcaatttagcaataaggtaaatatttaggatgtataaatttcttttagttgtcctaggcagtagttttggtttgc-----ataaaat 3596703  T
Q  156 taaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacct 253  Q
    ||||||| |||||  |||||||||  |||||||  ||| | ||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  3596704 taaataaacagaatgtaaagatatagttggaaagaataagagagagatgagattaggtctttcgaatcatttatgttcccctaattggtatactgcacct 3596803  T
Q  254 attcttatgaatgatt 269  Q
    ||||||||||||||||    
T  3596804 attcttatgaatgatt 3596819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 24371435 - 24371354
Alignment:
Q  137 gatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaa 219  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  24371435 gatttgattgca-taaaagtaaataacagaaaataaagatttgtttggaaaatatatggagagatgagactaggtatttcgaa 24371354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 17106441 - 17106648
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||| ||| |||||||||||||| |   |||||| ||||||||||||||||||||| ||||||| |           | |||||||||||||||||     
T  17106441 tccacgaagacagtgttaatctcaatttcacaataaagtaaatatttaggatgtataaattattttgtt-----------tagatttgatttgattgca- 17106528  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgc 249  Q
    ||||| ||||||||| |||||||||||  | || ||||||||   ||||||| |||  | |||||||||| |||  |||||||||||||||||||| |||    
T  17106529 taaaattaaataacataaaataaagattcggttagaaaatatgaagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatattgc 17106628  T
Q  250 acctattcttatgaatgatt 269  Q
    || |||||||||||||||||    
T  17106629 acatattcttatgaatgatt 17106648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 2379531 - 2379316
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaat 150  Q
    ||||||||||  ||||||||||||| ||| |||||  | |||||||| ||||| |||| ||||||  |||| |||||||| | |||| ||||      ||    
T  2379531 ccacgaggacactgttaatctcaatttagcaataaggttaatatttaagatgtgtaaattattttagtgcctgaggcagtagttttggtttgc-----at 2379437  T
Q  151 aaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||| ||||||| ||||| |||||||||  ||||||||  ||| | ||||||| |||  ||||||||| || |||  |||||||||||||||||||||||    
T  2379436 aaaattaaataaacagaatataaagatagttttggaaagaataagagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatactg 2379337  T
Q  249 cacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||    
T  2379336 cacctattcttatgaatgatt 2379316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 23008360 - 23008226
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||| |||||||||||||||||||||  || |||||| | |||||||||||||| |||| ||||||||||||| || || | |||||||||      | |    
T  23008360 tccatgaggactgtgttaatctcaattaagcaataaagttaatatttaggatgtgtaaattattttgatgcccaagacaatagatttgatt------cca 23008267  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaata 190  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  23008266 taaaagtaaataacataaaataaagatttgtttggaaaata 23008226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 23780004 - 23780138
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    |||| |||||||||||||||||||||  || |||||| | |||||||||||||| |||| ||||||||||||| || || | |||||||||      | |    
T  23780004 tccatgaggactgtgttaatctcaattaagcaataaagttaatatttaggatgtgtaaattattttgatgcccaagacaatagatttgatt------cca 23780097  T
Q  150 taaaagtaaataacagaaaataaagatatgtttggaaaata 190  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  23780098 taaaagtaaataacataaaataaagatttgtttggaaaata 23780138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 14281348 - 14281562
Alignment:
Q  58 gactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagta 157  Q
    |||||||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  ||||| | ||||| | |||||||     ||| ||||| ||    
T  14281348 gactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgcccaacgcagtagttttgatt-----gca-taaaatta 14281441  T
Q  158 aataa-cagaaaataaagatatgtttggaaaatatatggagagata----agactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    ||||| |||||||||||||||  ||||||||| | | ||||||| |    | |  |||||||||||| |||  |||||||||||||||| ||||||||||    
T  14281442 aataaacagaaaataaagatagttttggaaaagaaaaggagagagagatgacatcaggtctttcgaatcatctatgttcccctaattgggatactgcacc 14281541  T
Q  253 tattcttatgaatgattctct 273  Q
    |||||||||||||||||||||    
T  14281542 tattcttatgaatgattctct 14281562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 9839316 - 9839432
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgca 250  Q
    |||| ||||||| ||||||||||| | ||||| ||||||||  | |||||| |||  |||||||||||| |||  |||||||||||||||||||||||||    
T  9839316 aaaattaaataaaagaaaataaagtt-tgtttagaaaatatgag-agagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgca 9839413  T
Q  251 cctattcttatgaatgatt 269  Q
    |||||||||||||||||||    
T  9839414 cctattcttatgaatgatt 9839432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 23842611 - 23842677
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  23842611 tccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgtataaattattttg 23842677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 13005482 - 13005271
Alignment:
Q  61 tgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagtaaat 160  Q
    ||||||||||||||| ||| ||||| || ||||| |||||||| |||| |||||   |||| |||||||| | |||||||     |||  |||| |||||    
T  13005482 tgtgttaatctcaatttagcaataagattaatatctaggatgtttaaattatttatttgcctgaggcagtagttttgatt-----gcag-aaaattaaat 13005389  T
Q  161 aa-cagaaaataaagatatgtttggaaaatatatggagagata----agactaggtctttcgaaccattgatgttcccctaattggtatactgcacctat 255  Q
    || ||||||||||| |||  ||||||||| ||| ||||||| |    |||  ||||||||| || |||  |||||||||||||||||||||| |||||||    
T  13005388 aaacagaaaataaaaatagttttggaaaagataaggagagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatacttcacctat 13005289  T
Q  256 tcttatgaatgattctct 273  Q
    ||||||||||||||||||    
T  13005288 tcttatgaatgattctct 13005271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 20185934 - 20185830
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   |||||||||||  |||| ||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  20185934 gaaaatatagatttggttagaaaatatgaagagagataagatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaa 20185835  T
Q  265 tgatt 269  Q
    |||||    
T  20185834 tgatt 20185830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 22150057 - 22150161
Alignment:
Q  165 gaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||| |||| || || ||||||||   |||||||||||  |||| ||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  22150057 gaaaatatagatttggttagaaaatatgaagagagataagatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaa 22150156  T
Q  265 tgatt 269  Q
    |||||    
T  22150157 tgatt 22150161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 4512624 - 4512561
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  4512624 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatgaatgattc 4512561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 274
Target Start/End: Original strand, 22561058 - 22561206
Alignment:
Q  124 aggcagttgatttgatttgattgcaataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaacca 222  Q
    |||||||||||| | |||||||||| ||||||||| |||||||||||||||||  ||||  || | ||| | ||||||| |||  ||||||||| || ||    
T  22561058 aggcagttgattgg-tttgattgca-taaaagtaactaacagaaaataaagattggtttaaaaga-ataagagagagatgagatcaggtctttcaaatca 22561154  T
Q  223 ttgatgttcccctaattggtatactgcacctattcttatgaatgattctctg 274  Q
    |  | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  22561155 tctacgttcccctaattggtatactgcacctattcttatgaatgattttctg 22561206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 30655633 - 30655526
Alignment:
Q  166 aaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||    
T  30655633 aaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacttattcttatgaat 30655534  T
Q  266 gattctct 273  Q
    ||||||||    
T  30655533 gattctct 30655526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 11125676 - 11125734
Alignment:
Q  210 gtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgat 268  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11125676 gtctttcgaatcatcgatgttcccctaattggtatactgcacctattcttatgaatgat 11125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 11187985 - 11188086
Alignment:
Q  14 cactaaatactatcgaagtagtnnnnnnnntatcgttcc-acgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatat 112  Q
    ||||||||||||||||||||||        ||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||    
T  11187985 cactaaatactatcgaagtagtaaaaaa--tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattat 11188082  T
Q  113 tttg 116  Q
    ||||    
T  11188083 tttg 11188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 30655758 - 30655693
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  30655758 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 30655693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 1125562 - 1125773
Alignment:
Q  55 gaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgcaataaa 153  Q
    ||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | |||| |||||||| | |||| ||||      |||||    
T  1125562 gaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagtgcctgaggcagtagttttggtttgc-----ataaa 1125656  T
Q  154 agtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    | ||||||| ||||| |||||||||  ||||||||| |    ||||||| |||  | |||||||||| |||| |||||| |||||||||||||||| |||    
T  1125657 attaaataaacagaatataaagatagttttggaaaagaacaagagagatgagagcatgtctttcgaatcatttatgttctcctaattggtatactggacc 1125756  T
Q  253 tattcttatgaatgatt 269  Q
    |||||||||||||||||    
T  1125757 tattcttatgaatgatt 1125773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 26896235 - 26896298
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  26896235 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatgattc 26896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 26942256 - 26942473
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||| ||||||||||||||||||  ||  |||||| ||||||||||||||||||||| |  ||| |  ||||| ||||||| | |||| ||||          
T  26942256 ccacgtggactgtgttaatctcaaattatcaataaagtaaatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgc----- 26942350  T
Q  149 ataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
    |||||| ||||||| || || |||||||||   |||||||  ||| | ||||||| |||  |||||||||||  |||  |||||||||||||||||||||    
T  26942351 ataaaattaaataaacaaaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgattcatctatgttcccctaattggtatac 26942450  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||||||||| |||||||||||    
T  26942451 tgcacctattcctatgaatgatt 26942473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 6513416 - 6513338
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||| |||  |||||||||||| |||  || |||||||||||| ||||||||||||||||||||||||||||||||    
T  6513416 gagagatgagatcaggtctttcgaatcatctatattcccctaattgatatactgcacctattcttatgaatgattctct 6513338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32109828 - 32109750
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||| |||  |||||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32109828 gagagatgagatcaggtctttcgaatcatcaatgttcccctaatttgtatgctgcacctattcttatgaatgattctct 32109750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 11729161 - 11729218
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  11729161 actgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 11729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23381993 - 23382050
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  23381993 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaa 23382050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 24155294 - 24155402
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  24155294 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatatatgttcccctaattggtatactgcacctattc 24155392  T
Q  258 ttatgaatga 267  Q
    || |||||||    
T  24155393 ttgtgaatga 24155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 13947166 - 13947106
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||    
T  13947166 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatga 13947106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 19476148 - 19476084
Alignment:
Q  209 ggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  19476148 ggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatgagtctct 19476084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 5738079 - 5738122
Alignment:
Q  226 atgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5738079 atgttcccctaattggtatactgcacctattcttatgaatgatt 5738122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 10290141 - 10290062
Alignment:
Q  186 aaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaat 265  Q
    |||||||  |||||||||||  |||||||||||| |||  ||||||||| |||||||||||||||| |||||||||||||    
T  10290141 aaatataaagagagataagatcaggtctttcgaatcatctatgttccccgaattggtatactgcacttattcttatgaat 10290062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 18855953 - 18856058
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  18855953 aataacagaaaataaagattggtttaaagaata-agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 18856051  T
Q  258 ttatgaa 264  Q
    || ||||    
T  18856052 ttgtgaa 18856058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 23848083 - 23848017
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||  | |||| ||||||||||||||||||||| |||||||    
T  23848083 tccacgaggactgtgttaatctcaatttaacactaaagtaaatatttaggatgtataaattattttg 23848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 24410494 - 24410383
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| |  ||||||| ||  ||||||||||||| |||  ||||| ||||||||||||||||||||||||||    
T  24410494 aataacagaaaataaagattggttttaagaata-agagagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattc 24410396  T
Q  258 ttatgaatgattc 270  Q
    || |||| |||||    
T  24410395 ttgtgaacgattc 24410383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 11402417 - 11402346
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    ||||||| |||  |||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||||    
T  11402417 gagagatgagatcaggtctttcgattcatctatgtttccctaattggtatactgcacctattcttatgaatg 11402346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 24400327 - 24400264
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||||||||||| |||| |||||    
T  24400327 taggtctttcgaatcatctatgtttccctaattggtatactgcacctattcttgtgaacgattc 24400264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 10290286 - 10290228
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||| ||| |||||| | |||||||||||| ||||||    
T  10290286 tccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatatataaa 10290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 28230743 - 28230685
Alignment:
Q  207 taggtctttcgaaccattgatgtt-cccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  28230743 taggtctttcgaatcatttatgttacccctaattggtatactgcacctattcttgtgaa 28230685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 2372397 - 2372340
Alignment:
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgat 268  Q
    ||||||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||    
T  2372397 tctttcgaatcatctatgttcccctagttggtatactgcacatattcttatgaatgat 2372340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 28107764 - 28107825
Alignment:
Q  208 aggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||| ||||||| |||  |||||||||||||||||||||| || ||||||||||||||||||    
T  28107764 aggtatttcgaatcatctatgttcccctaattggtatactacagctattcttatgaatgatt 28107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 5737890 - 5738005
Alignment:
Q  56 aggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaag 155  Q
    |||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |||||| ||||| |||||||| | |||| ||||      ||||||     
T  5737890 aggactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttaatgcctgaggcagtagttttggtttg-----cataaaat 5737984  T
Q  156 taaataacagaaaataaagat 176  Q
    ||||||||| |||||||||||    
T  5737985 taaataacataaaataaagat 5738005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 2846498 - 2846385
Alignment:
Q  163 cagaaaataaagatatgtttggaaaatatatggaga--gataagactaggtctttcgaaccattgatgttcccctaattggtatactgcaccta-ttctt 259  Q
    |||||||||||||||  ||||||||| ||| |||||  ||| |||  | |||||||||| | |  | || |||||||||||||||||||||||| |||||    
T  2846498 cagaaaataaagatagttttggaaaagataaggagatagatgagatcaagtctttcgaatcctctaagtccccctaattggtatactgcacctatttctt 2846399  T
Q  260 atgaatgattctct 273  Q
    | ||||||||||||    
T  2846398 acgaatgattctct 2846385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 5260110 - 5260020
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatt 140  Q
    ||||| |||||| ||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  ||||||||||||| | |||||||    
T  5260110 tccacaaggactatgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgcccgaggcagtagttttgatt 5260020  T

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Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 13021176 - 13021277
Alignment:
Q  153 aagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacc 252  Q
    ||||||||| |||||||||||| |  ||||  ||||||||  ||||||| ||| ||||||||| ||| | |  | |||||||||||||||| ||||||||    
T  13021176 aagtaaatagcagaaaataaagtt--gtttataaaatatagagagagatgagagtaggtcttttgaatcctctaagttcccctaattggtacactgcacc 13021273  T
Q  253 tatt 256  Q
    ||||    
T  13021274 tatt 13021277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 23847894 - 23847855
Alignment:
Q  229 ttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  23847894 ttcccctaattggtatactgcacctattc-tatgaatgatt 23847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 269
Target Start/End: Original strand, 28111773 - 28111804
Alignment:
Q  238 ttggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||||||||||||    
T  28111773 ttggtatactgcacctattcttatgaatgatt 28111804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 3826644 - 3826702
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    ||||| |||||||||||||||||||  ||| |||||| | |||||||||||||| ||||    
T  3826644 tccacaaggactgtgttaatctcaacttagcaataaagttaatatttaggatgtgtaaa 3826702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 5618031 - 5618089
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||||| ||||| || ||||| ||||    
T  5618031 tccacgaggactgtgttaatctcaacttagcaataaaattaatatctatgatgtgtaaa 5618089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 14966524 - 14966466
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  14966524 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 14966466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 34502646 - 34502588
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  34502646 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 34502588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 7128447 - 7128398
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctatt 256  Q
    ||||||||||||| |||  |||||||||||||||||||| ||||| ||||    
T  7128447 taggtctttcgaatcatctatgttcccctaattggtataatgcacatatt 7128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 10290213 - 10290170
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  10290213 gatttgatttgattgca-taaaattaaataacataaaataaagat 10290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 269
Target Start/End: Original strand, 694 - 905
Alignment:
Q  57 ggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaataaaagt 156  Q
    ||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  ||| ||||||||| | |||||||     ||| ||||| |    
T  694 ggactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgctcgaggcagtagttttgatt-----gca-taaaatt 787  T
Q  157 aaataac-agaaaataaagatatgtttggaaaatatatggagagata----agactaggtctttcgaaccattgatgttcccctaattggtatactgcac 251  Q
    ||||||  ||||||||||| ||  ||||||||| ||| |||||||||    | |  |||||||||||| |||  ||||||||||||||||||||||||||    
T  788 aaataaatagaaaataaaggtagttttggaaaagataaggagagatagatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcac 887  T
Q  252 ctattcttatgaatgatt 269  Q
    ||||||||||||||||||    
T  888 ctattcttatgaatgatt 905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 443 - 205
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg-atgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||  | ||| ||||||| |||| | |||||||||     
T  443 tccacgaggactgtgttaatctcaatttagcaatatagtaaatatttaggatgtataaattattttgttttccctaggcagtagattggttttgattgc- 345  T
Q  149 ataaaagtaaataacagaaaataa-------------------agatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgt 229  Q
    |||||| ||||||||| |||||||                   |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||    
T  344 ataaaattaaataacataaaataatgattcggttagaatttatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatatatgt 245  T
Q  230 tcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  244 tcccctaattggtatactgcacatattcttatgaatgatt 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 273
Target Start/End: Complemental strand, 19696 - 19476
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| | |||  | |||||||||||||  |||| |  ||| |  ||||| ||||||| | |||| ||||    ||    
T  19696 ccacgaggactgtgttaatctcaatttagcagtaacgttaatatttaggatgcgtaaatttcttttagttgccctaggcagtagttttggtttg----ca 19601  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
      |||||||||||||||||||||| ||||   |||||||  ||  | ||||||| |||  |||||||||||| |||  ||||||| ||||||||||||||    
T  19600 taaaaagtaaataacagaaaataa-gatagagttggaaagaatgagagagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatact 19502  T
Q  248 gcacctattcttatgaatgattctct 273  Q
    ||||||||||||||||||||||||||    
T  19501 gcacctattcttatgaatgattctct 19476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 273
Target Start/End: Complemental strand, 27298 - 27189
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||    
T  27298 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattcttatga 27199  T
Q  264 atgattctct 273  Q
    ||||||||||    
T  27198 atgattctct 27189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 27421 - 27355
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||| |||||||    
T  27421 tccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttg 27355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 269
Target Start/End: Original strand, 3601 - 3826
Alignment:
Q  44 tatcgttc-cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatt 140  Q
    |||||||| |||||||||||||||||||||||| ||| |||||  |||||| ||| |||||||||| |  ||| |  ||||| ||||||| | |||| ||    
T  3601 tatcgttctcacgaggactgtgttaatctcaatttagtaataaggtaaataattaagatgtataaatttcttttagttgccctaggcagtagttttggtt 3700  T
Q  141 tgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaat 238  Q
    ||      |||||| ||||||| |||||  ||||||||   |||||||  ||| | ||||||| |||  |||||||||||| |||  ||||| |||||||    
T  3701 tgc-----ataaaattaaataaacagaatgtaaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatgttaccctaat 3795  T
Q  239 tggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||||||||||||||||||||||    
T  3796 tggtatactgcacctattcttatgaatgatt 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 10567 - 10492
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||| || |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  10567 gagagatgagtctaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattcttgtgaatgattc 10492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 8183 - 8257
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    |||||||||||  |||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  8183 gagagataagatcaggtctttcgaatcatttatgtttccctaattggtatactacacctattcttatgaatgatt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 1361 - 1427
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||| ||||||||||||| ||| |||||| ||||||||||||| ||||||| |||||||    
T  1361 tccacgaggactctgttaatctcaatttagcaataaagtaaatatttaggacgtataaattattttg 1427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 8039 - 8097
Alignment:
Q  58 gactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||    
T  8039 gactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttg 8097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 1485 - 1586
Alignment:
Q  167 aaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    |||||||||| || || ||||||||   ||||||| |||  || ||||||||| |||  || ||||| ||||||||| ||||||||||||||||||||||    
T  1485 aaataaagatttggttagaaaatatgaagagagattagatcagatctttcgaatcatatattttccc-taattggtaaactgcacctattcttatgaatg 1583  T
Q  267 att 269  Q
    |||    
T  1584 att 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 431 - 215
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga--tgcccgaggcagttgatttgatttgattgca 148  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| |  ||||| ||||||| | |||| ||||  |       
T  431 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgtata-- 334  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatg-gagagataagactaggtctttcgaaccattgatgttcccctaattggtatact 247  Q
      |||||||||||||||||||||| ||||   |||||||  ||  | ||||||| |||  | |||||||||| |||  ||||||||||||||||||||||    
T  333 --aaaagtaaataacagaaaataa-gatagagttggaaagaatgagagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatact 237  T
Q  248 gcacctattcttatgaatgatt 269  Q
    ||||||||||||||||||||||    
T  236 gcacctattcttatgaatgatt 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 198336 - 198235
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  198336 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 198237  T
Q  264 at 265  Q
    ||    
T  198236 at 198235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 198454 - 198389
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  198454 tccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggat-tataaaatattttg 198389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 248707 - 248602
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  248707 agaaaatatagatttgattagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttatga 248608  T
Q  264 atgatt 269  Q
     |||||    
T  248607 gtgatt 248602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 248830 - 248764
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||| |||||||||||| |||||||    
T  248830 tccacgaggactgtgttgatctcaatttagcaataaagtaaatattaaggatgtataaattattttg 248764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 92739 - 92620
Alignment:
Q  51 ccacgaggactgtgttaatctcaatgtagaaataaaataaat-atttaggatgtataaaatattttgatgcccgaggcagttgatttgatttgattgcaa 149  Q
    ||||||||||||||||| ||||||  | | |||||| |  || ||||||||||| |||| ||||||| ||||| |||||||||    |||||| ||||||    
T  92739 ccacgaggactgtgttattctcaacttggcaataaagtttattatttaggatgtgtaaattattttgttgccctaggcagttg----gatttggttgcaa 92644  T
Q  150 taaaagtaaataacagaaaataaa 173  Q
    |||||   || |||||||||||||    
T  92643 taaaaagtaagaacagaaaataaa 92620  T

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Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 99155 - 99277
Alignment:
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||||||| ||||  ||||||||| ||  |||||||| |||| ||||||||| || | ||  | |||| |||||||||  ||||    
T  99155 ataaaagtaaataacagaaaataa-gatagttttggaaaagatgaggagagatgagaccaggtctttcaaatcttttgt-ttcctctaattggttcactg 99252  T
Q  249 cacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||    
T  99253 cacctattcttatgaatgattctct 99277  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 270
Target Start/End: Original strand, 118365 - 118484
Alignment:
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactg 248  Q
    |||||||||||||||||||||||| ||||  | ||||||| ||  |||||||| | |  |||||||||||| | |   | ||||| ||||||||  ||||    
T  118365 ataaaagtaaataacagaaaataa-gatagttctggaaaagatgaggagagatgatatcaggtctttcgaatcctctgt-ttcccttaattggtccactg 118462  T
Q  249 cacctattcttatgaatgattc 270  Q
    ||||||||||||||||||||||    
T  118463 cacctattcttatgaatgattc 118484  T

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Target: scaffold0321 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 2981 - 3044
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  2981 taggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttgtgaatgattc 3044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 241642 - 241580
Alignment:
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  241642 tctttcgaatcatctatgttcccctaattggtatactgcacctatttttatgaatgattctct 241580  T

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Target: scaffold0126 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 14247 - 14357
Alignment:
Q  158 aataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattc 257  Q
    |||||||||||||||||||  ||||  | |||| | | |||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||||||||     
T  14247 aataacagaaaataaagattggttttaagaataaaag-agagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattt 14345  T
Q  258 ttatgaatgatt 269  Q
     ||| |||||||    
T  14346 gtattaatgatt 14357  T

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Target: scaffold0757 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 5662 - 5596
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    |||||||||||||| ||||||||||| ||| |||||| |||||||||||||| |||||| |||||||    
T  5662 tccacgaggactgttttaatctcaatttagtaataaagtaaatatttaggatatataaattattttg 5596  T

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Target: scaffold0757; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 5510 - 5436
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  || |||||||||||| |||| |||||||||||||||||||||||    
T  5510 gagagatgagatcaggtctttcgaatcatctatattcccctaattgatatagtgcacctattcttatgaatgatt 5436  T

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Target: scaffold0757; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 5591 - 5548
Alignment:
Q  132 gatttgatttgattgcaataaaagtaaataacagaaaataaagat 176  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  5591 gatttgatttgattgca-taaaattaaataacataaaataaagat 5548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 27 - 101
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||| |||||||    
T  27 gagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattcgtattaatgatt 101  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 67519 - 67567
Alignment:
Q  225 gatgttcccctaattggtatactgcacctattcttatgaatgattctct 273  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  67519 gatgttcccctaattggtatactgcacctattgttatgattgattctct 67567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 15558 - 15498
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||    
T  15558 taggtctttcgaatcatctatgttcccctaattgggatactgcacctattcttgtgaatga 15498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 4062 - 3999
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgattc 270  Q
    ||||||||||||| |||  ||||| | |||||||||||||||||||||||||| ||||||||||    
T  4062 taggtctttcgaatcatctatgtttctctaattggtatactgcacctattcttgtgaatgattc 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 10142 - 10038
Alignment:
Q  151 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccat-tgatgttcccctaattggtatactgc 249  Q
    |||||||||||||| ||| |||| || ||||||||||| ||| |||||||| |||||| |||||| ||| | | ||| |||||||||||||||| |||||    
T  10142 aaaagtaaataacataaattaaatat-tgtttggaaaagataaggagagatgagactatgtcttttgaatcctctga-gttcccctaattggtacactgc 10045  T
Q  250 acctatt 256  Q
    |||||||    
T  10044 acctatt 10038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 90070 - 89854
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttga-tgcccgaggcagttgatttgatttgattgca 148  Q
    |||||||||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| |  ||| | |||| |||||||| | || |   ||  ||||    
T  90070 tccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatttgttttagtgcctgaggcagtaggttgg---tg--tgca 89976  T
Q  149 ataaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagata--agactaggtctttcgaaccattgatgttcccctaattggtatac 246  Q
      ||||| |||||||||||||||| ||||  ||||||||| | | ||||||| |  |||  |||||||||||| |||  | |||||||||||||||||||    
T  89975 taaaaagcaaataacagaaaataa-gatagttttggaaaacacaaggagagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatac 89877  T
Q  247 tgcacctattcttatgaatgatt 269  Q
    ||||| ||||| ||| |||||||    
T  89876 tgcacatattcgtattaatgatt 89854  T

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Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 31241 - 31183
Alignment:
Q  207 taggtctttcgaaccattgatgtt-cccctaattggtatactgcacctattcttatgaa 264  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  31241 taggtctttcgaatcatttatgttacccctaattggtatactgcacctattcttgtgaa 31183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 254 - 150
Alignment:
Q  164 agaaaataaagatatgtttggaaaatatatggagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatga 263  Q
    |||||||| |||| || || ||||||||   ||||||| |||  |||||||||||| |||  |||||||||||||||||||||| || || |||||||||    
T  254 agaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatatatgttcccctaattggtatactaca-ctgttcttatga 156  T
Q  264 atgatt 269  Q
    ||||||    
T  155 atgatt 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 366 - 309
Alignment:
Q  59 actgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttg 116  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||| ||||| |||||||    
T  366 actgtgttaatctcaatttagcaataaagtaaatatttaggatgaataaattattttg 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 19426 - 19366
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  |||||| ||| ||||||||||||||||||||||| |||||||    
T  19426 taggtctttcgaatcatctatgttcacctcattggtatactgcacctattcttgtgaatga 19366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 29511 - 29451
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatga 267  Q
    ||||||||||||| |||  ||||||||||||||  |||||||||||||||||| |||||||    
T  29511 taggtctttcgaatcatctatgttcccctaatttttatactgcacctattcttgtgaatga 29451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 58661 - 58716
Alignment:
Q  211 tctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatg 266  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| ||||||    
T  58661 tctttcgaatcatctatgttcccctaatttgtatactgcacctattcttgtgaatg 58716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 2049 - 2111
Alignment:
Q  207 taggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||||| ||| |||  |||||| || |||||||||| |||||||||||||||||||||||    
T  2049 taggtctttagaatcatctatgttctccgaattggtatattgcacctattcttatgaatgatt 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 57553 - 57627
Alignment:
Q  195 gagagataagactaggtctttcgaaccattgatgttcccctaattggtatactgcacctattcttatgaatgatt 269  Q
    ||||||| |||  |||||||||||| |||  |||||| | ||||||||||| |||||||||||||||||| ||||    
T  57553 gagagatgagatcaggtctttcgaatcatctatgttcacataattggtatattgcacctattcttatgaacgatt 57627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 1742 - 1831
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaaatattttgatgcccgaggcagttgatttgat 139  Q
    ||||| |||||||||||||||||||| ||| |||||  | ||||| |||||||| |||| ||||||  |||||||| |||| | ||||||    
T  1742 tccacaaggactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattattttagtgcccgagccagtagttttgat 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 6579 - 6521
Alignment:
Q  50 tccacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  6579 tccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 48313 - 48385
Alignment:
Q  139 tttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaatatatggagagataagactaggtc 212  Q
    |||||||||| ||||||||||||| | ||| |||||| | ||||| |||||||||||||||||| ||||||||||    
T  48313 tttgattgca-taaaagtaaataaacggaatataaaggt-tgtttagaaaatatatggagagatgagactaggtc 48385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 228937 - 228881
Alignment:
Q  52 cacgaggactgtgttaatctcaatgtagaaataaaataaatatttaggatgtataaa 108  Q
    |||||||||||||||||||||||  ||| |||||| | ||||| |||||||| ||||    
T  228937 cacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 228881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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