View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11977_low_72 (Length: 216)
Name: NF11977_low_72
Description: NF11977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11977_low_72 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12404821 - 12404621
Alignment:
| Q |
1 |
ccgccactcaccacctccctgacccaccattaaagacggcgcgtgtttctcacctcccaccatgtgaaccatctctctatgaatacactccatgtgagga |
100 |
Q |
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| T |
12404821 |
ccgccactcaccacctccctgacccaccattaaagacggcgcgtgtttctcacctcccaccatgtgaaccatctctctatgaatacactccatgtgagga |
12404722 |
T |
|
| Q |
101 |
tcagaaaaggtcattgaggttctctagaaagaaacttatctaccgggagagacactgtcccttaccggaggagactctccggtgtagaataccagctccg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12404721 |
tcagaaaaggtcattgaggttctctagaaagaaacttatctaccgggagagacactgtcccttaccggaggagactctccggtgtagaataccagctccg |
12404622 |
T |
|
| Q |
201 |
t |
201 |
Q |
| |
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| |
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|
| T |
12404621 |
t |
12404621 |
T |
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