View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11978_low_1 (Length: 1052)

Name: NF11978_low_1
Description: NF11978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11978_low_1
NF11978_low_1
[»] chr8 (65 HSPs)
chr8 (1-1037)||(23245086-23246127)
chr8 (484-764)||(9235366-9235648)
chr8 (1-332)||(24063122-24063453)
chr8 (1-371)||(24015964-24016334)
chr8 (1-310)||(24073591-24073900)
chr8 (482-666)||(24528816-24529000)
chr8 (487-664)||(23288931-23289110)
chr8 (487-666)||(14698115-14698293)
chr8 (487-556)||(2873531-2873600)
chr8 (487-570)||(11830258-11830340)
chr8 (487-570)||(23389101-23389184)
chr8 (487-550)||(29346087-29346150)
chr8 (487-550)||(32684792-32684855)
chr8 (487-570)||(38703808-38703890)
chr8 (487-570)||(41509592-41509674)
chr8 (487-556)||(5566707-5566776)
chr8 (487-556)||(9305630-9305699)
chr8 (487-543)||(37545128-37545184)
chr8 (487-570)||(12478656-12478738)
chr8 (487-550)||(24331558-24331621)
chr8 (487-550)||(30872625-30872688)
chr8 (487-570)||(34227409-34227491)
chr8 (490-570)||(28786470-28786551)
chr8 (487-570)||(13572622-13572705)
chr8 (487-550)||(24768621-24768684)
chr8 (487-570)||(27637278-27637361)
chr8 (487-570)||(32393393-32393475)
chr8 (487-570)||(35990757-35990839)
chr8 (487-549)||(5642791-5642853)
chr8 (487-549)||(5644732-5644794)
chr8 (487-549)||(38711853-38711915)
chr8 (489-550)||(8442147-8442208)
chr8 (487-556)||(29211952-29212021)
chr8 (489-549)||(4944026-4944086)
chr8 (500-631)||(5600211-5600340)
chr8 (500-631)||(5640280-5640409)
chr8 (487-570)||(15935597-15935679)
chr8 (484-550)||(24375876-24375943)
chr8 (489-551)||(26367210-26367272)
chr8 (489-564)||(27702953-27703028)
chr8 (488-550)||(18029695-18029757)
chr8 (489-570)||(10328973-10329053)
chr8 (489-550)||(30221855-30221916)
chr8 (487-543)||(10761506-10761562)
chr8 (487-550)||(12719303-12719367)
chr8 (487-551)||(15568932-15568996)
chr8 (574-665)||(24375792-24375884)
chr8 (487-550)||(25653933-25653997)
chr8 (490-542)||(36637078-36637130)
chr8 (487-570)||(8626596-8626678)
chr8 (487-550)||(13174951-13175014)
chr8 (437-484)||(29427007-29427054)
chr8 (487-550)||(31974920-31974983)
chr8 (571-665)||(13373279-13373373)
chr8 (487-556)||(12936359-12936428)
chr8 (487-532)||(13558582-13558627)
chr8 (438-485)||(13980087-13980135)
chr8 (487-551)||(33958663-33958727)
chr8 (487-570)||(297691-297773)
chr8 (500-551)||(35839453-35839504)
chr8 (436-485)||(28786301-28786353)
chr8 (604-666)||(28786404-28786466)
chr8 (436-481)||(5600428-5600473)
chr8 (436-481)||(5640147-5640192)
chr8 (604-665)||(12719188-12719249)
[»] chr2 (62 HSPs)
chr2 (487-666)||(42223107-42223287)
chr2 (487-657)||(23381242-23381411)
chr2 (487-666)||(41906073-41906251)
chr2 (487-556)||(9419723-9419792)
chr2 (487-556)||(29949638-29949707)
chr2 (487-570)||(15543924-15544006)
chr2 (487-570)||(36525358-36525441)
chr2 (487-556)||(7007997-7008066)
chr2 (487-556)||(38949939-38950008)
chr2 (487-563)||(43830719-43830795)
chr2 (487-550)||(2526434-2526497)
chr2 (487-550)||(7318174-7318237)
chr2 (487-570)||(18048899-18048982)
chr2 (487-550)||(18756579-18756642)
chr2 (487-570)||(25103945-25104028)
chr2 (487-550)||(38127845-38127908)
chr2 (487-549)||(1975713-1975775)
chr2 (488-570)||(29883999-29884081)
chr2 (487-549)||(42794094-42794156)
chr2 (487-550)||(15580597-15580661)
chr2 (487-543)||(19253482-19253538)
chr2 (487-543)||(39373076-39373132)
chr2 (487-570)||(10071340-10071423)
chr2 (487-570)||(17188830-17188913)
chr2 (487-550)||(17886645-17886708)
chr2 (487-550)||(26498740-26498803)
chr2 (489-556)||(33315226-33315293)
chr2 (487-550)||(34831574-34831637)
chr2 (487-570)||(39752070-39752153)
chr2 (487-549)||(874436-874498)
chr2 (604-666)||(959678-959740)
chr2 (587-665)||(11478091-11478169)
chr2 (489-570)||(11915102-11915184)
chr2 (487-540)||(33218565-33218618)
chr2 (507-571)||(35791098-35791161)
chr2 (487-550)||(776504-776567)
chr2 (487-550)||(16303851-16303914)
chr2 (487-549)||(16590530-16590593)
chr2 (487-550)||(18755254-18755317)
chr2 (487-550)||(29096829-29096892)
chr2 (487-550)||(30497233-30497296)
chr2 (492-550)||(31377636-31377695)
chr2 (571-665)||(31989489-31989583)
chr2 (489-543)||(41100777-41100831)
chr2 (489-550)||(16204537-16204598)
chr2 (487-556)||(16260592-16260661)
chr2 (489-550)||(19272746-19272807)
chr2 (486-570)||(24217043-24217127)
chr2 (571-659)||(35791130-35791219)
chr2 (487-543)||(22846216-22846272)
chr2 (487-550)||(28781851-28781914)
chr2 (487-569)||(31260847-31260928)
chr2 (604-666)||(41567353-41567415)
chr2 (439-484)||(966566-966611)
chr2 (597-665)||(11915181-11915249)
chr2 (487-550)||(29878909-29878973)
chr2 (487-550)||(31989436-31989500)
chr2 (507-550)||(16138933-16138976)
chr2 (436-485)||(35790997-35791047)
chr2 (523-553)||(41567435-41567465)
chr2 (487-551)||(18155419-18155484)
chr2 (604-665)||(31397428-31397489)
[»] chr3 (62 HSPs)
chr3 (489-666)||(25124870-25125047)
chr3 (487-764)||(17030611-17030887)
chr3 (487-581)||(25158871-25158964)
chr3 (558-781)||(55257628-55257852)
chr3 (484-556)||(28735522-28735594)
chr3 (487-570)||(300250-300332)
chr3 (487-550)||(13041593-13041656)
chr3 (487-550)||(13049670-13049733)
chr3 (487-550)||(31293682-31293745)
chr3 (487-550)||(52839529-52839592)
chr3 (487-570)||(52962313-52962395)
chr3 (487-556)||(19111164-19111233)
chr3 (487-556)||(32721731-32721800)
chr3 (567-666)||(17582473-17582573)
chr3 (487-550)||(2985727-2985790)
chr3 (487-550)||(14870160-14870223)
chr3 (487-550)||(22817964-22818027)
chr3 (487-549)||(13439795-13439857)
chr3 (489-550)||(22438831-22438892)
chr3 (521-666)||(43426321-43426467)
chr3 (436-491)||(43426510-43426566)
chr3 (487-550)||(5572183-5572246)
chr3 (487-550)||(22447045-22447108)
chr3 (487-550)||(26770150-26770213)
chr3 (487-550)||(31073887-31073950)
chr3 (487-570)||(38703195-38703277)
chr3 (500-570)||(7226166-7226236)
chr3 (487-549)||(14004495-14004557)
chr3 (487-556)||(7670570-7670639)
chr3 (585-666)||(23070096-23070177)
chr3 (482-550)||(7272637-7272705)
chr3 (586-666)||(7308191-7308270)
chr3 (487-543)||(16897325-16897381)
chr3 (487-549)||(28298187-28298250)
chr3 (487-550)||(39218864-39218926)
chr3 (487-582)||(45007945-45008039)
chr3 (487-550)||(45151706-45151769)
chr3 (487-549)||(14220599-14220661)
chr3 (487-549)||(14224826-14224888)
chr3 (571-653)||(18359346-18359428)
chr3 (436-485)||(25124780-25124830)
chr3 (487-570)||(30226182-30226265)
chr3 (510-550)||(34314776-34314816)
chr3 (586-666)||(45008057-45008137)
chr3 (487-550)||(14155006-14155069)
chr3 (491-550)||(36727826-36727885)
chr3 (492-550)||(7308129-7308186)
chr3 (436-491)||(7308315-7308374)
chr3 (484-550)||(26932440-26932506)
chr3 (588-634)||(37050164-37050210)
chr3 (487-549)||(54571324-54571386)
chr3 (436-491)||(55257638-55257697)
chr3 (487-540)||(4658711-4658764)
chr3 (437-481)||(25158790-25158835)
chr3 (487-543)||(3505237-3505293)
chr3 (586-666)||(7013267-7013347)
chr3 (496-543)||(23070188-23070235)
chr3 (487-550)||(25024769-25024832)
chr3 (487-553)||(41423126-41423193)
chr3 (487-550)||(48689187-48689250)
chr3 (487-549)||(17582245-17582307)
chr3 (597-666)||(25159022-25159091)
[»] chr7 (82 HSPs)
chr7 (487-764)||(1853184-1853455)
chr7 (487-666)||(15635169-15635349)
chr7 (487-666)||(42957462-42957642)
chr7 (487-666)||(43393790-43393970)
chr7 (487-582)||(10931974-10932069)
chr7 (542-764)||(9689230-9689450)
chr7 (487-715)||(3092282-3092509)
chr7 (487-556)||(12005487-12005556)
chr7 (484-666)||(27484835-27485021)
chr7 (487-551)||(20055049-20055113)
chr7 (487-550)||(5864675-5864738)
chr7 (495-657)||(10975616-10975777)
chr7 (487-550)||(13263951-13264014)
chr7 (487-550)||(26254787-26254850)
chr7 (487-550)||(31307933-31307996)
chr7 (487-570)||(32199972-32200054)
chr7 (487-570)||(38192773-38192856)
chr7 (571-665)||(2936226-2936320)
chr7 (487-556)||(442617-442686)
chr7 (487-551)||(31863939-31864003)
chr7 (487-570)||(2240631-2240714)
chr7 (487-570)||(2241065-2241148)
chr7 (487-550)||(2300904-2300967)
chr7 (487-550)||(3401884-3401947)
chr7 (487-570)||(8391045-8391128)
chr7 (487-550)||(11576800-11576863)
chr7 (487-570)||(13592789-13592872)
chr7 (490-549)||(17155693-17155752)
chr7 (487-570)||(21444076-21444158)
chr7 (487-550)||(31749402-31749465)
chr7 (487-550)||(32946368-32946431)
chr7 (487-549)||(2514143-2514205)
chr7 (487-549)||(21522000-21522062)
chr7 (484-556)||(2936303-2936376)
chr7 (487-556)||(15721012-15721081)
chr7 (487-556)||(47370235-47370304)
chr7 (487-570)||(17051898-17051981)
chr7 (487-543)||(21022595-21022651)
chr7 (487-551)||(43707155-43707219)
chr7 (487-570)||(20164314-20164397)
chr7 (571-715)||(24812897-24813042)
chr7 (487-550)||(30632080-30632143)
chr7 (487-570)||(31750802-31750884)
chr7 (487-550)||(33441094-33441157)
chr7 (487-550)||(35158265-35158328)
chr7 (484-550)||(1572815-1572881)
chr7 (571-660)||(45687732-45687822)
chr7 (489-570)||(45687792-45687873)
chr7 (558-666)||(11625115-11625224)
chr7 (489-550)||(34258336-34258397)
chr7 (487-550)||(9689474-9689537)
chr7 (487-550)||(10067836-10067899)
chr7 (487-570)||(20089355-20089437)
chr7 (487-550)||(36374228-36374291)
chr7 (487-550)||(37913883-37913946)
chr7 (487-550)||(38130917-38130980)
chr7 (487-570)||(44448403-44448486)
chr7 (489-551)||(28696488-28696550)
chr7 (491-556)||(17167587-17167652)
chr7 (487-540)||(25571176-25571229)
chr7 (487-551)||(7967750-7967814)
chr7 (436-485)||(9689223-9689274)
chr7 (487-550)||(15011882-15011946)
chr7 (487-570)||(24812844-24812928)
chr7 (586-634)||(27082664-27082712)
chr7 (586-634)||(27195589-27195637)
chr7 (487-543)||(41380471-41380527)
chr7 (487-550)||(15994555-15994617)
chr7 (487-570)||(26202390-26202473)
chr7 (436-491)||(1853405-1853462)
chr7 (675-745)||(2936361-2936431)
chr7 (487-549)||(14187824-14187886)
chr7 (436-485)||(19377009-19377059)
chr7 (608-666)||(19377094-19377152)
chr7 (489-543)||(40938200-40938254)
chr7 (499-551)||(2624800-2624852)
chr7 (487-543)||(46146281-46146337)
chr7 (487-550)||(24233379-24233442)
chr7 (487-549)||(25601921-25601984)
chr7 (568-634)||(25601868-25601934)
chr7 (436-491)||(42957667-42957724)
chr7 (487-540)||(34436698-34436751)
[»] chr5 (60 HSPs)
chr5 (487-764)||(20355097-20355372)
chr5 (487-666)||(21144061-21144240)
chr5 (487-666)||(42778887-42779064)
chr5 (487-570)||(34309521-34309603)
chr5 (487-556)||(8855480-8855549)
chr5 (487-570)||(4561814-4561896)
chr5 (487-550)||(11721348-11721411)
chr5 (487-550)||(12148138-12148201)
chr5 (586-764)||(15399617-15399796)
chr5 (487-570)||(31312664-31312746)
chr5 (487-570)||(31920142-31920225)
chr5 (487-543)||(4414009-4414065)
chr5 (487-551)||(35687407-35687471)
chr5 (487-570)||(21039947-21040029)
chr5 (487-550)||(22756294-22756357)
chr5 (487-550)||(25233856-25233919)
chr5 (487-550)||(25298016-25298079)
chr5 (487-550)||(31567715-31567778)
chr5 (536-666)||(37869442-37869572)
chr5 (487-570)||(38874548-38874630)
chr5 (487-550)||(41123374-41123437)
chr5 (487-570)||(6896995-6897077)
chr5 (487-542)||(17885941-17885996)
chr5 (491-550)||(21125167-21125226)
chr5 (487-550)||(25962884-25962947)
chr5 (487-550)||(40765466-40765529)
chr5 (487-550)||(42368519-42368582)
chr5 (586-745)||(13153559-13153717)
chr5 (489-550)||(6117670-6117731)
chr5 (493-550)||(13153722-13153779)
chr5 (489-570)||(23188776-23188856)
chr5 (487-551)||(7577921-7577985)
chr5 (489-549)||(23159551-23159611)
chr5 (487-546)||(23108867-23108926)
chr5 (487-570)||(25088758-25088841)
chr5 (487-570)||(25146727-25146810)
chr5 (487-550)||(30916565-30916628)
chr5 (486-550)||(5818468-5818532)
chr5 (436-491)||(15399610-15399669)
chr5 (585-666)||(17668731-17668812)
chr5 (487-540)||(29691043-29691096)
chr5 (516-551)||(17190799-17190834)
chr5 (487-530)||(26243183-26243226)
chr5 (487-550)||(28796429-28796492)
chr5 (487-541)||(42097895-42097949)
chr5 (487-551)||(18231988-18232053)
chr5 (487-540)||(27330991-27331044)
chr5 (506-551)||(30907421-30907466)
chr5 (498-550)||(8861436-8861488)
chr5 (507-546)||(6527402-6527441)
chr5 (487-550)||(10819581-10819643)
chr5 (571-645)||(17190822-17190897)
chr5 (489-547)||(20628154-20628213)
chr5 (436-491)||(18232078-18232137)
chr5 (487-529)||(37217454-37217496)
chr5 (487-551)||(7653939-7654004)
chr5 (437-485)||(21143957-21144008)
chr5 (487-540)||(21180164-21180217)
chr5 (518-551)||(38083013-38083046)
chr5 (497-570)||(41958927-41959000)
[»] chr6 (41 HSPs)
chr6 (487-666)||(9662768-9662948)
chr6 (487-666)||(25166934-25167115)
chr6 (487-666)||(9044481-9044661)
chr6 (487-570)||(1227759-1227841)
chr6 (487-570)||(8237721-8237804)
chr6 (487-550)||(9222557-9222620)
chr6 (487-570)||(7321971-7322053)
chr6 (491-550)||(10343584-10343643)
chr6 (487-550)||(12292945-12293008)
chr6 (487-570)||(16659673-16659755)
chr6 (487-570)||(21544213-21544295)
chr6 (487-557)||(32216963-32217033)
chr6 (487-551)||(3108710-3108774)
chr6 (487-543)||(17158350-17158406)
chr6 (487-551)||(34414499-34414563)
chr6 (487-550)||(9234927-9234990)
chr6 (487-550)||(10546092-10546155)
chr6 (487-570)||(11107742-11107825)
chr6 (487-550)||(13729166-13729229)
chr6 (487-550)||(16119776-16119839)
chr6 (487-550)||(22495929-22495992)
chr6 (487-570)||(26475845-26475928)
chr6 (487-550)||(26882159-26882222)
chr6 (487-553)||(22362701-22362767)
chr6 (487-543)||(2270535-2270591)
chr6 (487-551)||(9676449-9676513)
chr6 (487-551)||(18591348-18591412)
chr6 (487-543)||(32603721-32603776)
chr6 (487-550)||(686521-686584)
chr6 (487-550)||(29942608-29942671)
chr6 (496-550)||(14291163-14291217)
chr6 (588-653)||(3816602-3816667)
chr6 (487-550)||(18274331-18274395)
chr6 (487-543)||(33708789-33708845)
chr6 (487-544)||(11197734-11197792)
chr6 (489-550)||(18592095-18592156)
chr6 (517-570)||(34077556-34077608)
chr6 (487-551)||(1208623-1208687)
chr6 (436-491)||(3816763-3816821)
chr6 (487-555)||(13462702-13462770)
chr6 (440-483)||(18274434-18274478)
[»] chr1 (46 HSPs)
chr1 (487-666)||(25059903-25060082)
chr1 (571-666)||(13436984-13437079)
chr1 (489-764)||(5469375-5469650)
chr1 (487-570)||(13436932-13437013)
chr1 (487-550)||(26190813-26190876)
chr1 (487-550)||(5932044-5932107)
chr1 (487-570)||(9209657-9209740)
chr1 (487-570)||(16420995-16421078)
chr1 (487-570)||(47641895-47641978)
chr1 (487-570)||(23161908-23161989)
chr1 (487-550)||(14909988-14910051)
chr1 (487-550)||(21770837-21770900)
chr1 (487-550)||(22387405-22387468)
chr1 (487-570)||(41189919-41190001)
chr1 (487-550)||(44961088-44961151)
chr1 (487-550)||(47231199-47231262)
chr1 (487-549)||(5457163-5457225)
chr1 (487-549)||(20158880-20158942)
chr1 (487-549)||(26399087-26399149)
chr1 (497-550)||(22152076-22152129)
chr1 (491-550)||(21853758-21853817)
chr1 (487-570)||(30147148-30147231)
chr1 (487-549)||(33864133-33864196)
chr1 (487-549)||(33916726-33916789)
chr1 (487-549)||(6284409-6284471)
chr1 (487-549)||(12126211-12126273)
chr1 (487-570)||(15336703-15336787)
chr1 (436-491)||(22315144-22315202)
chr1 (585-665)||(33864202-33864282)
chr1 (585-665)||(33916640-33916720)
chr1 (487-563)||(46528977-46529053)
chr1 (558-634)||(17890201-17890279)
chr1 (487-550)||(27665999-27666062)
chr1 (574-664)||(44228413-44228503)
chr1 (516-570)||(16639643-16639696)
chr1 (496-550)||(31883552-31883606)
chr1 (487-551)||(9240549-9240614)
chr1 (487-550)||(44228357-44228421)
chr1 (605-664)||(5882997-5883056)
chr1 (509-556)||(7261428-7261475)
chr1 (487-550)||(45195622-45195685)
chr1 (487-570)||(47979975-47980057)
chr1 (487-549)||(1701151-1701213)
chr1 (436-483)||(33465250-33465299)
chr1 (436-482)||(5469609-5469657)
chr1 (487-524)||(17890292-17890329)
[»] chr4 (61 HSPs)
chr4 (489-666)||(8809963-8810140)
chr4 (489-764)||(5283685-5283958)
chr4 (487-666)||(42161298-42161478)
chr4 (542-764)||(13555607-13555827)
chr4 (487-570)||(14121456-14121539)
chr4 (487-565)||(25244575-25244652)
chr4 (487-570)||(32682381-32682464)
chr4 (487-570)||(50773371-50773454)
chr4 (487-550)||(3652353-3652416)
chr4 (487-570)||(17696275-17696357)
chr4 (487-550)||(30919000-30919063)
chr4 (487-550)||(42056061-42056124)
chr4 (487-570)||(49166728-49166810)
chr4 (487-556)||(18510065-18510134)
chr4 (489-570)||(2032625-2032708)
chr4 (487-563)||(39152039-39152115)
chr4 (484-550)||(9780517-9780584)
chr4 (487-550)||(18165119-18165182)
chr4 (487-550)||(49296231-49296294)
chr4 (487-549)||(7913343-7913405)
chr4 (487-549)||(21507908-21507970)
chr4 (487-549)||(22854046-22854108)
chr4 (487-565)||(23184839-23184915)
chr4 (489-550)||(39133169-39133230)
chr4 (487-551)||(30409334-30409398)
chr4 (487-570)||(5514565-5514648)
chr4 (487-570)||(14574753-14574836)
chr4 (487-570)||(16589063-16589146)
chr4 (487-549)||(41325443-41325505)
chr4 (478-540)||(50719663-50719725)
chr4 (500-565)||(46088143-46088208)
chr4 (487-550)||(13555851-13555914)
chr4 (575-666)||(16875975-16876066)
chr4 (487-550)||(24675362-24675425)
chr4 (605-715)||(8678879-8678989)
chr4 (585-666)||(9780430-9780511)
chr4 (487-551)||(23091845-23091910)
chr4 (487-556)||(31856976-31857045)
chr4 (492-549)||(55927167-55927224)
chr4 (436-491)||(8810186-8810242)
chr4 (436-485)||(13555600-13555651)
chr4 (487-570)||(26040717-26040800)
chr4 (487-550)||(29104242-29104306)
chr4 (487-551)||(31226410-31226474)
chr4 (487-550)||(4102871-4102934)
chr4 (487-550)||(52194394-52194457)
chr4 (487-549)||(32681928-32681990)
chr4 (489-550)||(14946042-14946103)
chr4 (487-548)||(50604103-50604164)
chr4 (487-570)||(29172705-29172788)
chr4 (436-485)||(37589671-37589722)
chr4 (437-483)||(12324431-12324478)
chr4 (487-550)||(12388167-12388230)
chr4 (487-570)||(17251328-17251411)
chr4 (484-550)||(21744809-21744876)
chr4 (491-549)||(29700585-29700644)
chr4 (586-665)||(49277766-49277845)
chr4 (487-549)||(49533146-49533208)
chr4 (596-666)||(16734243-16734313)
chr4 (489-541)||(38926067-38926120)
chr4 (507-556)||(40568225-40568274)
[»] scaffold0004 (2 HSPs)
scaffold0004 (484-666)||(82227-82409)
scaffold0004 (487-550)||(212595-212658)
[»] scaffold0142 (1 HSPs)
scaffold0142 (487-634)||(34894-35042)
[»] scaffold0067 (2 HSPs)
scaffold0067 (516-666)||(25796-25942)
scaffold0067 (436-491)||(25986-26042)
[»] scaffold0002 (2 HSPs)
scaffold0002 (487-556)||(332146-332215)
scaffold0002 (487-550)||(432623-432686)
[»] scaffold0121 (1 HSPs)
scaffold0121 (487-550)||(12550-12613)
[»] scaffold0258 (1 HSPs)
scaffold0258 (487-550)||(18830-18893)
[»] scaffold0022 (1 HSPs)
scaffold0022 (487-570)||(63242-63324)
[»] scaffold0010 (1 HSPs)
scaffold0010 (489-556)||(145114-145181)
[»] scaffold0005 (1 HSPs)
scaffold0005 (487-570)||(242539-242622)
[»] scaffold0188 (2 HSPs)
scaffold0188 (607-776)||(13286-13453)
scaffold0188 (436-491)||(13391-13448)
[»] scaffold0026 (1 HSPs)
scaffold0026 (489-549)||(84258-84318)
[»] scaffold0430 (1 HSPs)
scaffold0430 (487-550)||(12713-12776)
[»] scaffold0289 (1 HSPs)
scaffold0289 (487-570)||(6807-6889)
[»] scaffold0154 (1 HSPs)
scaffold0154 (487-550)||(9303-9366)
[»] scaffold0003 (2 HSPs)
scaffold0003 (487-553)||(316515-316580)
scaffold0003 (604-665)||(306678-306738)
[»] scaffold1462 (1 HSPs)
scaffold1462 (491-556)||(199-264)


Alignment Details
Target: chr8 (Bit Score: 843; Significance: 0; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 843; E-Value: 0
Query Start/End: Original strand, 1 - 1037
Target Start/End: Original strand, 23245086 - 23246127
Alignment:
Q  1 acaacaatgaaattgcaacactcaagaatgcaccaatgaaggccataatgtacgcaaaaaagggaaggaatagtgccacaattacactactaactacaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23245086 acaacaatgaaattgcaacactcaagaatgcaccaatgaaggccataatgtacgcaaaaaagggaaggaatagtgccacaattacactactaactacaat 23245185  T
Q  101 tgttgttctaacaataatgctaataggcttgctcatgcatagatgccatttgtcctcgatagcaattgttattgggctgataagaatagcatattttgtg 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23245186 tgttgttctaacaataatgctaataggtttgctcatgcatagatgccatttatcctcgatagcaattgttattgggctgataagaatagcatattttgtg 23245285  T
Q  201 aaaggattaattacggtggaatagattgctattttagtacttatagtgcttatgggtaaatttaatgtgatttgtgacttcaaattatctccatacatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23245286 aaaggattaattacggtggaatagattgctattttagtacttatagtgcttatgggtaaatttaatgtgatttgtgacttcaaattatctccatacatca 23245385  T
Q  301 tgtagcctaaaatggcaattgttccatagatagtagcgcttaccacaaaacataccagcacaacctacaattggtgaaacatcacattgataagaaagat 400  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23245386 tgtagcctaaaatggcaatagttccatagatagtagcgcttaccacaaaacataccatcacaacctacaattggtgaaacatcacattgataagaaagat 23245485  T
Q  401 acctcgaaaacagactgaaaattataataaatatcagggttaatatatgttta-ccctgtaatattagcgatttctggtttaccccatgtaatttgaaga 499  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  23245486 acctcgaaaacagactgaaaattataataaatatcatggttaatatatgtttacccctgtaatattagcaatttccggtttacctcatgtaatttgaaga 23245585  T
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgac-aggggtaaaacgaa 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||    
T  23245586 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaacattgatgatatggcaaggggtaaaacgaa 23245685  T
Q  599 attatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattacatggttgaaatc 698  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||        ||||||||||||| |||||||||     
T  23245686 attatctcaaattacatggggcgaaagtaccttaaattttaaaatttaatgccatataggtccaaaat-caaaaaatcttcaaattacagggttgaaata 23245784  T
Q  699 gaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatatcaacactaaatattattcgctcattctagaaatg 798  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  23245785 gaaacaaatttttttactaaatagtaaaccggaaatcactaatattgcaggagggtaaacatatatcaaccctaaatattattcgctcattctataaatg 23245884  T
Q  799 aacgaaacatttcattatatcatactctctccgtcctaaaataactaacgtagttgatcaattcatatatattaagaaactatataaataaaaggagaaa 898  Q
    | |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23245885 agcgaaacatttcattatatcatactatctccctcctaaaataactaacgtagttgatcaattcatatatattaagaaactatataaataaaaggagaaa 23245984  T
Q  899 atttatttcctcaagaaaaaag---gataatannnnnnnaa-agagtacataaattctttaaatgaaagaaaaaataccttggaaaattgttttctttca 994  Q
    ||||||||||||||||||||||    ||| |        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23245985 atttatttcctcaagaaaaaagatatatatttttttttaaagagagtacataaattctttaaatgaaagaaaaaataccttggaaaattgttttctttca 23246084  T
Q  995 ctcatggaattgcgtattgtgggaagtaatgcatgaacattgt 1037  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23246085 ctcatggaattgcgtattgtgggaagtaatgcatgaacattgt 23246127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 484 - 764
Target Start/End: Original strand, 9235366 - 9235648
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatga 583  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||     
T  9235366 ccatgtaatttgaagaattttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacagggtggtaaaccgaaatatcgatgatatgt 9235465  T
Q  584 c-aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaa 682  Q
    | |||| |||| | ||||| | |||||||||||||||||||||||||||||| |||  ||||| ||||||| ||||||||||||        ||||||||    
T  9235466 caagggttaaaccaaaattctttcaaattacaaggggcgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaat-caaaaaatcttcaaa 9235564  T
Q  683 ttacatggttgaaatcgaaacaa--atttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
    ||||| |||||||||| ||||||   ||| |||||  |   ||||| |||||||||||||||||| ||| ||||||||||||||    
T  9235565 ttacagggttgaaatctaaacaattttttttttacagaggggtaaaccggaaatcactaatattacaggggggtaaacatatat 9235648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 24063122 - 24063453
Alignment:
Q  1 acaacaatgaaattgcaacactcaagaatgcaccaatgaaggccataatgtacgcaaaaaagggaaggaatagtgccacaattacactactaactacaat 100  Q
    |||||||||||||||| ||||||||||| |||||||| || |||||||||||  ||||||| ||||  |||||||| |||||||||||||| || |||||    
T  24063122 acaacaatgaaattgccacactcaagaaagcaccaataaaagccataatgtatccaaaaaatggaacaaatagtgcaacaattacactacttaccacaat 24063221  T
Q  101 tgttgttctaacaataatgctaataggcttgctcatgcatagatgccatttgtcctcgatagcaattgttattgggctgataagaatagcatattttgtg 200  Q
     | ||||||||| | |||||||| |||  | ||| |||||||||||||||| ||||| || ||| |  |||||||  |||| | ||||||||| ||||||    
T  24063222 ggatgttctaacgagaatgctaacaggtcttctcttgcatagatgccatttttcctcaatggcattgattattggagtgattacaatagcatactttgtg 24063321  T
Q  201 aaaggattaattacggtggaatagattgctattttagtacttatagtgcttatgggtaaatttaatgtgatttgtgacttcaaattatctccatacatca 300  Q
    |||||||||| ||  |||| ||| ||||||||||| ||||| ||  |  || | |||| ||||||||||||||| ||||| |||| ||||||| ||||||    
T  24063322 aaaggattaactattgtggtatatattgctatttttgtactgattttatttgttggtagatttaatgtgatttgagactttaaatgatctccaaacatca 24063421  T
Q  301 tgtagcctaaaatggcaattgttccatagata 332  Q
    |||| ||||| || || |  ||||||||||||    
T  24063422 tgtaacctaatatagccacggttccatagata 24063453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 24015964 - 24016334
Alignment:
Q  1 acaacaatgaaattgcaacactcaagaatgcaccaatgaaggccataatgtacgcaaaaaagggaaggaatagtgccacaattacactactaactacaat 100  Q
    ||||| |||| ||||| |||||||| || |||||||| || |||||||||||  ||||||| ||||  |||||||||||||  ||||| || || |||||    
T  24015964 acaaccatgacattgccacactcaaaaaagcaccaataaaagccataatgtatccaaaaaatggaacaaatagtgccacaaagacactgcttaccacaat 24016063  T
Q  101 tgttgttctaacaataatgctaataggcttgctcatgcatagatgccatttgtcctcgatagcaattgttattgggctgataagaatagcatattttgtg 200  Q
     | ||||||||  | ||||||||||||  | ||| |||||||||||||||| || || || ||| |  |||||||  |||| | ||||||||| || |||    
T  24016064 ggctgttctaatgagaatgctaataggtcttctcttgcatagatgccatttttcttcaatggcattgattattggagtgattataatagcatacttagtg 24016163  T
Q  201 aaaggattaattacggtggaatagattgctattttagtacttatagtgcttatgggtaaatttaatgtgatttgtgacttcaaattatctccatacatca 300  Q
    |||||||| ||||| |||| ||| ||||||| ||| |||||||| ||  || | |||| ||||||||||||||| |||||||||| ||| ||| ||||      
T  24016164 aaaggatttattactgtggtatatattgctaattttgtacttattgtatttgttggtagatttaatgtgatttgagacttcaaatgatccccaaacatgc 24016263  T
Q  301 tgtagcctaaaatggcaattgttccatagatagtagcgcttaccacaaaacataccagcacaacctacaat 371  Q
    |||||||||| |  || |  |||||||||||| | | |||| ||| ||| || ||||||| ||||| ||||    
T  24016264 tgtagcctaatacagctacggttccatagataattgtgcttgccataaagcaaaccagcaaaacctgcaat 24016334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 24073591 - 24073900
Alignment:
Q  1 acaacaatgaaattgcaacactcaagaatgcaccaatgaaggccataatgtacgcaaaaaagggaaggaatagtgccacaattacactactaactacaat 100  Q
    |||||||||| ||||| |  |||||||| |||||||| || |||||||||||  ||||||| ||||  |||||||||||||||||||| || | ||||||    
T  24073591 acaacaatgacattgccatgctcaagaaagcaccaataaaagccataatgtatccaaaaaatggaacaaatagtgccacaattacactgctgattacaat 24073690  T
Q  101 tgttgttctaacaataatgctaataggcttgctcatgcatagatgccatttgtcctcgatagcaattgttattgggctgataagaatagcatattttgtg 200  Q
      ||||||| |  | |||||| |  ||  | ||| |||||||||||||||||||||| || ||| |  |||||||  |||| |  |||||||| || |||    
T  24073691 gcttgttcttatgagaatgcttaagggtcttctcttgcatagatgccatttgtcctcaatggcattgattattggagtgattaccatagcatacttggtg 24073790  T
Q  201 aaaggattaattacggtggaatagattgctattttagtacttatagtgcttatgggtaaatttaatgtgatttgtgacttcaaattatctccatacatca 300  Q
    |||||| | ||||| |||| ||| ||||||||||| ||||| ||  |  || | |||| ||||||||||||||| ||||| |||| ||||||| ||||||    
T  24073791 aaaggagttattactgtggcatatattgctatttttgtactgattttatttgttggtagatttaatgtgatttgagactttaaatgatctccaaacatca 24073890  T
Q  301 tgtagcctaa 310  Q
    ||||||||||    
T  24073891 tgtagcctaa 24073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 482 - 666
Target Start/End: Original strand, 24528816 - 24529000
Alignment:
Q  482 ccccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatat 581  Q
    ||||||||||||||||  ||||| ||||| || ||||||||||||||||||||||||||||||||||| | |||| |||||||  |||||||||||||||    
T  24528816 ccccatgtaatttgaatctttttggttttagattttcatgaattttgactgtacaaaatcgatgatattacaggg-ggtaaactgaaatatcgatgatat 24528914  T
Q  582 gaca-ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |  | |||||||| ||| ||| ||| ||||||||| |||||||| ||| ||||| |||| ||||| ||||||  ||||| ||||||    
T  24528915 ggtagggggtaaaccgagattctctaaaattacaaagggcgaaaatactttaaattttataatttgatgccacgaaggtacaaaat 24529000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 487 - 664
Target Start/End: Original strand, 23288931 - 23289110
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat-gatagggtggtaaaccaaaatatcgatgatatgaca 585  Q
    |||||||||||||||||| ||||| ||  ||||||||| ||||| |||||||||| ||||||| |  ||||||   |||| |||||||||||||||||||    
T  23288931 tgtaatttgaagatttttggttttagaacttcatgaatattgaccgtacaaaatcaatgatatagcgagggtg---aaccgaaatatcgatgatatgaca 23289027  T
Q  586 gggg----taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaa 664  Q
    ||||    ||||  |||||| |||||||||||| ||| ||||||||||||||| |||  ||||| ||||||| ||||||||||    
T  23289028 ggggggattaaacagaaattctctcaaattacaggggacgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaa 23289110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 14698115 - 14698293
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    ||||||||||||||||||  ||||| || || |||||||||||| |||||||||| ||||||||  | || ||||| |  |||||||||||||||| |||    
T  14698115 tgtaatttgaagattttttattttgaacctttatgaattttgacagtacaaaatcaatgatatggcaagg-ggtaacctgaaatatcgatgatatggcag 14698213  T
Q  587 gggtaaaac-gaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||  |||| |||||| ||||||||||||| || | ||||||||||||| |||| || || ||||||| |||||| |||||    
T  14698214 ggggcaaactgaaattttctcaaattacaaaggacaaaagtaccttaaattttataa-ttgatgccatgaaggtctaaaat 14698293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 2873531 - 2873600
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  2873531 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 2873600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 11830258 - 11830340
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  11830258 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgataggg-ggtaaaccgaaat 11830340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 23389101 - 23389184
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||||  ||| |||||||| ||||    
T  23389101 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaaatcgaagatatgacgggggggtaaaccgaaat 23389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 29346087 - 29346150
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  29346087 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 29346150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 32684855 - 32684792
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  32684855 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 32684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 38703890 - 38703808
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||| ||||| |||||||| ||||    
T  38703890 tgtaatttgaagatttttggttttggaccttcatgaatttttactgtacaaaatcgaagatatggtaggg-ggtaaaccgaaat 38703808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 41509674 - 41509592
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||| |||| |||||||| ||||    
T  41509674 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatgacaggg-ggtaaaccgaaat 41509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 5566776 - 5566707
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  5566776 tgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatcgacgatatgacaggg 5566707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 9305699 - 9305630
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||| ||||    
T  9305699 tgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 9305630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 37545184 - 37545128
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  37545184 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 37545128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 12478656 - 12478738
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||| | |||||||||||| |||||||| ||||    
T  12478656 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgataggg-ggtaaaccgaaat 12478738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 24331621 - 24331558
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  24331621 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatg 24331558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 30872688 - 30872625
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  30872688 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatg 30872625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 34227409 - 34227491
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||  |||||  |||| |||||||||||||    
T  34227409 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatcgaacatatggcaggg-ggtaaaccaaaat 34227491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 490 - 570
Target Start/End: Complemental strand, 28786551 - 28786470
Alignment:
Q  490 aatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||  |||| | |||||||||||    
T  28786551 aatttgaagattctttgattttggaccttcatgaattttgactgtacaaaatcgatgatatggcagggagctaaaccaaaat 28786470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 13572622 - 13572705
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||||  |||| | |||||||||||    
T  13572622 tgtaatttaaagatttttggttttggaccttcatgaattttgacagtaaaaaatcgacgatatgtcagggggctaaaccaaaat 13572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 24768621 - 24768684
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| |||||| || || ||||||||||||||||||||||||| ||||||    
T  24768621 tgtaatttgaagatttttggttttgaaccttaatgaattttgactgtacaaaatcgaagatatg 24768684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 27637361 - 27637278
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||  ||||||  |||| | |||||||||||    
T  27637361 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcggcgatatggcagggggctaaaccaaaat 27637278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 32393393 - 32393475
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| || ||||||||| ||||||||||||| | |||||| ||||| |||||||| ||||    
T  32393393 tgtaatttgaagattttttgttttggacctttatgaattttaactgtacaaaatcaaagatatggtaggg-ggtaaaccgaaat 32393475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 35990839 - 35990757
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| | ||||||||||||||  ||||||||||||||| ||||||||||||  ||||||||||| |||||||| ||||    
T  35990839 tgtaatttgatgctttttagttttggatcttcatgaattttgacagtacaaaatcgaaaatatgataggg-ggtaaaccgaaat 35990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 5642791 - 5642853
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||| |||||    
T  5642791 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 5644732 - 5644794
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||| |||||    
T  5644732 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5644794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 38711915 - 38711853
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||||| |||||    
T  38711915 tgtaatttgaatatttttggttttggaccttcatgaattttgactgttcaaaatcgaagatat 38711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 489 - 550
Target Start/End: Complemental strand, 8442208 - 8442147
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||| ||||| ||||||||| |||||||||||||| |||| |||||||||||||||    
T  8442208 taatttgaagttttttggttttggaccttcatgaattttgagtgtataaaatcgatgatatg 8442147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 29211952 - 29212021
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||| | ||||||||| |||||||||||||||| ||||||||  |||||||| |||||    
T  29211952 tgtaatttgaagatttctggttttggaccttcatgaattttgactatacaaaatatatgatatggtaggg 29212021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 549
Target Start/End: Complemental strand, 4944086 - 4944026
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||| ||||||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  4944086 taatttgaatatttttagttttaaactttcatgaattttgacggtacaaaattgatgatat 4944026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 500 - 631
Target Start/End: Original strand, 5600211 - 5600340
Alignment:
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacaggggtaaaacgaaa 599  Q
    |||||||||||| || || |||||||||||||||||||||||||| |||||  || | |||||||  || |||| |||||||  |||||| ||  |||||    
T  5600211 tttttagttttgtacctttatgaattttgactgtacaaaatcgataatatggcagag-ggtaaactgaactatcaatgatatagcagggggaatccgaaa 5600309  T
Q  600 ttatctcaaattacaaggggcgaaagtacctt 631  Q
    || ||| ||||||  |||||||||||||||||    
T  5600310 ttctctaaaatta-taggggcgaaagtacctt 5600340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 500 - 631
Target Start/End: Complemental strand, 5640409 - 5640280
Alignment:
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacaggggtaaaacgaaa 599  Q
    |||||||||||| || || |||||||||||||||||||||||||| |||||  || | |||||||  || |||| |||||||  |||||| ||  |||||    
T  5640409 tttttagttttgtacctttatgaattttgactgtacaaaatcgataatatggcagag-ggtaaactgaactatcaatgatatagcagggggaatccgaaa 5640311  T
Q  600 ttatctcaaattacaaggggcgaaagtacctt 631  Q
    || ||| ||||||  |||||||||||||||||    
T  5640310 ttctctaaaatta-taggggcgaaagtacctt 5640280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 15935679 - 15935597
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||  |||||| ||||| ||| ||||||||||||||||||||||||| || |||||| ||||| |||||||| ||||    
T  15935679 tgtaatttgagaatttttggttttagaccttcatgaattttgactgtacaaaattgaagatatggtaggg-ggtaaaccgaaat 15935597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 24375943 - 24375876
Alignment:
Q  484 ccatgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||||||   |||||||| ||||||||||| ||||||||||||| |||||||||    
T  24375943 ccatgtaatttgaagattttttcattttggaccttcatgaatttcgactgtacaaaattgatgatatg 24375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 551
Target Start/End: Original strand, 26367210 - 26367272
Alignment:
Q  489 taatttgaagat-ttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  26367210 taatttgaagatcttttagttttggactt-catgaattttgaccgtacaaaatcaatgatatga 26367272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 564
Target Start/End: Complemental strand, 27703028 - 27702953
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaac 564  Q
    ||||||||||||| || | ||| ||||||||| ||||||||| |||||||||||||||||||| | || |||||||    
T  27703028 taatttgaagattgtttggtttagactttcataaattttgacggtacaaaatcgatgatatgacacggaggtaaac 27702953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 488 - 550
Target Start/End: Original strand, 18029695 - 18029757
Alignment:
Q  488 gtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||| ||| ||||| ||||||||| ||||||||||||||||||| ||||| |||||||||    
T  18029695 gtaattttaagtttttttgttttggaccttcatgaattttgactgtataaaattgatgatatg 18029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 10329053 - 10328973
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| || | ||||||||| |||||||||| | |||||||||||| |||||||||| || | |||||||||||||    
T  10329053 taatttgaagaattatggttttggaccttcatgaattataactgtacaaaattgatgatatgaaagtg-ggtaaaccaaaat 10328973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 30221855 - 30221916
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||| ||||| |||||| || ||||||||||||||| ||||||||||||| |||||    
T  30221855 taatttgaagttttttggttttgaaccttcatgaattttgaccgtacaaaatcgataatatg 30221916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 10761506 - 10761562
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    ||||| |||||||||||| ||||||||| || ||||||||||||| |||||||||||    
T  10761506 tgtaagttgaagattttttgttttggacctttatgaattttgactttacaaaatcga 10761562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 12719367 - 12719303
Alignment:
Q  487 tgtaatttg-aagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||| ||||||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  12719367 tgtaatttggaagatttttggttgtggacattcatgaattgtgactatacaaaatcgatgatatg 12719303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 15568996 - 15568932
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||| ||| |||||||| ||| || ||||||||||||| ||||||    
T  15568996 tgtaatttgaagatttttggttttagaccttcatgaaatttaacagtacaaaatcgataatatga 15568932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 574 - 665
Target Start/End: Complemental strand, 24375884 - 24375792
Alignment:
Q  574 gatgatatgacaggggtaaaac-gaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||| ||||||  |||| ||||||  ||||||||||||||| |||||||||| |||| |||  ||||| ||||||| |||||||||||    
T  24375884 gatgatatggcagggggtaaactgaaatttgctcaaattacaagggacgaaagtaccataaattttgtaatttgatgccatgaaggtccaaaa 24375792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 25653997 - 25653933
Alignment:
Q  487 tgtaatttgaagatttttagttttggact-ttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||| |||||||||||| ||||||    
T  25653997 tgtaatttgatgatttttggttttggacccttcatgaattttgacagtacaaaatcgaagatatg 25653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 36637078 - 36637130
Alignment:
Q  490 aatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcg 542  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| |||||||    
T  36637078 aatttgaatatttttagttttggacattcatgaattttgaccgtataaaatcg 36637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 8626596 - 8626678
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||  | ||||||||||||| ||||||||| || ||||||| | || |||||||||||||    
T  8626596 tgtaatttgatgatttttggttttggaactacatgaattttgaccgtacaaaattgaagatatgaga-ggaggtaaaccaaaat 8626678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 13174951 - 13175014
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||| |||||| | |||||| || ||||||||||||||| |||||||||||| ||||||    
T  13174951 tgtaatttgcagatttctggttttgaacattcatgaattttgaccgtacaaaatcgacgatatg 13175014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 437 - 484
Target Start/End: Original strand, 29427007 - 29427054
Alignment:
Q  437 gggttaatatatgtttaccctgtaatattagcgatttctggtttaccc 484  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  29427007 gggttaatacatgtttaccctgtaatattagcgatttcctgtttaccc 29427054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 31974983 - 31974920
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||  ||||||||| |||||| || ||||||||||||||||||||||||| || ||||||    
T  31974983 tgtaattcaaagatttttggttttgaaccttcatgaattttgactgtacaaaattgaagatatg 31974920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 13373373 - 13373279
Alignment:
Q  571 atcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    |||||||||||  |||||||| | || |||| |||||||||||||||||| ||| ||||||||| |||  ||||| ||||||  ||||| |||||    
T  13373373 atcgatgatatagcaggggtacaccggaattctctcaaattacaaggggcaaaaataccttaaattttgtaatttgatgccaggaaggttcaaaa 13373279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 12936428 - 12936359
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||| ||||| ||||||||| ||||| |||||||||  ||||||||| ||||| ||| ||||    
T  12936428 tgtaatttgaagttttttggttttggaccttcataaattttgaccatacaaaatcaatgatgtgacaggg 12936359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 13558582 - 13558627
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactg 532  Q
    |||||||||||||||||| |||||| || |||||||||||||||||    
T  13558582 tgtaatttgaagatttttggttttgtaccttcatgaattttgactg 13558627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 438 - 485
Target Start/End: Complemental strand, 13980135 - 13980087
Alignment:
Q  438 ggttaatatatgtttaccc-tgtaatattagcgatttctggtttacccc 485  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  13980135 ggttaatatatgtttacccctgtaatattagtgatttccggtttacccc 13980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 551
Target Start/End: Original strand, 33958663 - 33958727
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||  |||||  |||||||| ||||| ||||||||| |||||||||||| |||||||    
T  33958663 tgtaatttgaaattttttgattttggaccttcatcaattttgaccgtacaaaatcgaagatatga 33958727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 297691 - 297773
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||| |||| ||||| ||| ||||| |||||||  |||||||||||||  ||||| ||||| |||||||| ||||    
T  297691 tgtaatttgaagaattttggtttttgaccttcataaattttggttgtacaaaatcgaatatatggtaggg-ggtaaaccgaaat 297773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 551
Target Start/End: Original strand, 35839453 - 35839504
Alignment:
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||| ||||||||| ||||||||||||||  |||||||||||| |||||||    
T  35839453 tttttggttttggaccttcatgaattttgatagtacaaaatcgaagatatga 35839504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 28786301 - 28786353
Alignment:
Q  436 agggttaatatatgtttaccc---tgtaatattagcgatttctggtttacccc 485  Q
    |||||||||||||||| ||||   ||||||||||||||||||| |||||||||    
T  28786301 agggttaatatatgttcacccctctgtaatattagcgatttctagtttacccc 28786353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 604 - 666
Target Start/End: Complemental strand, 28786466 - 28786404
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||||| || ||| |||||||||||| ||| ||| || ||||||| ||||||||||||    
T  28786466 ctcaaattacagggagcggaagtaccttaaagtttgaaaattgatgccatgaaggtccaaaat 28786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 5600473 - 5600428
Alignment:
Q  436 agggttaatatatgtttaccctgtaatattagcgatttctggttta 481  Q
    |||||||||||||||||||||| ||||||||||  |||| ||||||    
T  5600473 agggttaatatatgtttaccctataatattagccgtttccggttta 5600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 436 - 481
Target Start/End: Original strand, 5640147 - 5640192
Alignment:
Q  436 agggttaatatatgtttaccctgtaatattagcgatttctggttta 481  Q
    |||||||||||||||||||||| ||||||||||  |||| ||||||    
T  5640147 agggttaatatatgtttaccctataatattagccgtttccggttta 5640192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 665
Target Start/End: Complemental strand, 12719249 - 12719188
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    |||||||||||||||||||||||| | | || ||| |||||| ||| ||| |||||||||||    
T  12719249 ctcaaattacaaggggcgaaagtatcatcaattttgaaatttgatgtcatgaaggtccaaaa 12719188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 7e-52; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 42223107 - 42223287
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca- 585  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||     
T  42223107 tgtaatttgaagaattttggttttggatcttcatgaattttgactgtacaaaatcgatgatatggtagggtggtaaaccgaaatattgatgatatgtcag 42223206  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||| |||  ||||| ||||||| ||||| ||||||    
T  42223207 ggggtaaaccgaaattctttcaaattacaaggggcgaaagtaccttaaattttgtaatttgatgccatgaaggttcaaaat 42223287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 487 - 657
Target Start/End: Original strand, 23381242 - 23381411
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgata-gggtggtaaaccaaaatatcgatgatatgaca 585  Q
    |||||||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||| | | | | || |||    
T  23381242 tgtaatttgaagcttttttattttggactttcatgaattttgactgcacaaaatcgatgatatgacaggggtggt-aaccaaaat-ttgctcaaattaca 23381339  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaag 657  Q
    || ||||| |||||||  |||||||||||||||||||||||||| |||| |||  ||||| |||||||||||    
T  23381340 ggagtaaatcgaaatttactcaaattacaaggggcgaaagtaccataaattttgtaatttgatgccataaag 23381411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 41906073 - 41906251
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca- 585  Q
    |||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||| ||||||  |||| |||||||  ||||||| |||||||| ||     
T  41906073 tgtaatttgaagatatttggttttcgaccttcatgaattttgactgtacaaaatcgacgatatggaaggg-ggtaaactgaaatatcaatgatatggcag 41906171  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||  |||||| |||||  |||||| || ||||||||||| ||| |||  ||||| ||||||||||||||||||||    
T  41906172 ggggtaaactgaaattctctcatgttacaa-ggtcgaaagtacctaaaattttgtaatttgatgccataaaggtccaaaat 41906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 9419792 - 9419723
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  9419792 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatcgaagatatgacaggg 9419723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 29949638 - 29949707
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  29949638 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggg 29949707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 15544006 - 15543924
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  15544006 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgataggg-ggtaaaccgaaat 15543924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 36525358 - 36525441
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||| || | |||||||| ||||    
T  36525358 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaattgatgatatgacagtggggtaaaccgaaat 36525441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 7008066 - 7007997
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  7008066 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtataaaatcgatgatatgacaggg 7007997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 38949939 - 38950008
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  38949939 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgataggg 38950008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 563
Target Start/End: Complemental strand, 43830795 - 43830719
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaa 563  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||    
T  43830795 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatataacaggggggtaaa 43830719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 2526434 - 2526497
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  2526434 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatg 2526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 7318174 - 7318237
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  7318174 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 7318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 18048899 - 18048982
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||   |||| |||||||| ||||    
T  18048899 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatagcaggggggtaaaccgaaat 18048982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 18756642 - 18756579
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  18756642 tgtaatttaaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 18756579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 25104028 - 25103945
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| | ||||||  |||| |||||||| ||||    
T  25104028 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatggcaggggggtaaaccgaaat 25103945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 38127845 - 38127908
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||    
T  38127845 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaattgaagatatg 38127908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 1975775 - 1975713
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  1975775 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 1975713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 488 - 570
Target Start/End: Original strand, 29883999 - 29884081
Alignment:
Q  488 gtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| ||||| |||| |||| ||||||||||||| |||||||||||||||||||||  |||| |||||||| ||||    
T  29883999 gtaatttgaagttttttggtttaggaccttcatgaattttggctgtacaaaatcgatgatatggaagggaggtaaaccgaaat 29884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 42794094 - 42794156
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  42794094 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 42794156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 15580661 - 15580597
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  15580661 tgtaatttgaagattttttgattttggaccttcatgaattttgaccgtacaaaatcgatgatatg 15580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 19253482 - 19253538
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  19253482 tgtaagttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 19253538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 39373076 - 39373132
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  39373076 tgtaatttgaagatttttggttttggaccttcatgaattttgactggacaaaatcga 39373132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 10071423 - 10071340
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| || |||||||||||| |||||||||||| ||||||| |||| | |||| ||||||    
T  10071423 tgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatcgacgatatgacagggagctaaatcaaaat 10071340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 17188913 - 17188830
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||| | || ||| ||||| | |||||||||||    
T  17188913 tgtagtttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcaacgacatggtagggggctaaaccaaaat 17188830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 17886708 - 17886645
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||  |||||||| ||||||||||||||||||||||||||    
T  17886708 tgtaatttgaagttttttggttttggatcttcatgaactttgactgtacaaaatcgatgatatg 17886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 26498803 - 26498740
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||    
T  26498803 tgtaatttgaagttttttggttttggaccttcatgaattttgactagacaaaatcgatgatatg 26498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 556
Target Start/End: Original strand, 33315226 - 33315293
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||| | ||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  33315226 taatttgaagatttatggttttggaccttcatggattttgacggtacaaaatcgatgatatggtaggg 33315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 34831574 - 34831637
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||| | ||||||    
T  34831574 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaaagatatg 34831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 39752153 - 39752070
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| || |||||||||||| |||||||||||| ||||||  |||| | |||||||||||    
T  39752153 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatcgacgatatggcagggggctaaaccaaaat 39752070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 874436 - 874498
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||| |||||    
T  874436 tgtaatttgaatatttttggttttagaccttcatgaattttgactgtacaaaatcgaagatat 874498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 604 - 666
Target Start/End: Original strand, 959678 - 959740
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  959678 ctcaaatttcaaggagcgaaagtaccttaaattttaaaatttaatgtcataaaggttcaaaat 959740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 587 - 665
Target Start/End: Complemental strand, 11478169 - 11478091
Alignment:
Q  587 gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||| |||  ||||| |||| || |||||||||||    
T  11478169 gggtaaaccgaaattatcccaaattacaagaggcgaaagtaccttaaattttgtaatttgatgctatgaaggtccaaaa 11478091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 489 - 570
Target Start/End: Original strand, 11915102 - 11915184
Alignment:
Q  489 taatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||| ||| ||||||||| |||||  |||||||||||| ||||| ||||||||| ||||||| |||||||||||    
T  11915102 taatttgaagattctttggttttggaccttcatagattttgactgtaaaaaattgatgatatggtagggtgataaaccaaaat 11915184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 33218618 - 33218565
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  33218618 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaat 33218565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 35791098 - 35791161
Alignment:
Q  507 ttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaata 571  Q
    |||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||| |||||    
T  35791098 ttttggaccttcatgaattttgactgtacaaaatcgatgatatggcaggg-ggtaaaccgaaata 35791161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 776567 - 776504
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| ||  |||||||| ||||||||||||||| |||||||||||| ||||||    
T  776567 tgtaatttgaagattgttgattttggaccttcatgaattttgacagtacaaaatcgaagatatg 776504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 16303914 - 16303851
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||| |||| ||||||||||||||||||||||||  |||||||||| | ||||||    
T  16303914 tgtaatttgaagaattttggttttggactttcatgaattttgagagtacaaaatcaaagatatg 16303851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 16590530 - 16590593
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||||||||||| | ||||| || |||||||||||||| |||||||||||||||||||    
T  16590530 tgtaatttgaagattttttggttttgcaccttcatgaattttgattgtacaaaatcgatgatat 16590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 18755317 - 18755254
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||| || | ||||||||| |||||||||||| ||||||||||||||| ||||||    
T  18755317 tgtaatttgaagacttatggttttggaccttcatgaattttaactgtacaaaatcgaagatatg 18755254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 29096829 - 29096892
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| |||||  |||||||| |||||||||||||| |||||||||| |||||||||    
T  29096829 tgtaatttgaagttttttgattttggaccttcatgaattttgattgtacaaaatagatgatatg 29096892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 30497233 - 30497296
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | ||||| ||| |||||||||||||| |||||||||| |||||||||    
T  30497233 tgtaatttgaagatttctggttttagaccttcatgaattttgaatgtacaaaatagatgatatg 30497296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 31377636 - 31377695
Alignment:
Q  492 tttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  31377636 tttgaagattcttttgttttgaactttcatgaattttgaccgtacaaaatcgatgatatg 31377695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 571 - 665
Target Start/End: Original strand, 31989489 - 31989583
Alignment:
Q  571 atcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    |||||||||||| ||||||||||  ||||||  |||| |||| | |||||||||||||| |||| |||  ||||| ||||||| |||||||||||    
T  31989489 atcgatgatatggcaggggtaaactgaaatttgctcatattatagggggcgaaagtaccataaattttgtaatttgatgccatgaaggtccaaaa 31989583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 41100777 - 41100831
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||    
T  41100777 taatttgaagatttatggttttggaccttcatgaattttgacagtacaaaatcga 41100831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 550
Target Start/End: Complemental strand, 16204598 - 16204537
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||| | ||||||    
T  16204598 taatttgaagaattttggttttggacattcatgaattttaactgtacaaaatcaaagatatg 16204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 16260592 - 16260661
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||| ||||||| |||||| || ||||||||||||||  ||| |||||||| ||||||||||||    
T  16260592 tgtaatttgatgatttttcgttttgaaccttcatgaattttgatagtataaaatcgaagatatgataggg 16260661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 19272746 - 19272807
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||| ||||| || ||||||    
T  19272746 taatttgaagatttttggttttagaccttcatgaattttgactgtaaaaaattgaagatatg 19272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 486 - 570
Target Start/End: Complemental strand, 24217127 - 24217043
Alignment:
Q  486 atgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||| | ||||||||||||| |||||  ||||| |||||||||||||    
T  24217127 atgtaatttgaagattctttggttttgaacttttatgaattttaattgtacaaaatcgacgatattgtaggg-ggtaaaccaaaat 24217043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 571 - 659
Target Start/End: Original strand, 35791130 - 35791219
Alignment:
Q  571 atcgatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggt 659  Q
    |||||||||||| |||||| |||| ||||||  ||||||||||||| |||||||||||||||||| |||  ||||| ||| ||| |||||    
T  35791130 atcgatgatatggcagggggtaaaccgaaatactctcaaattacaaagggcgaaagtaccttaaattttgtaatttgatggcatgaaggt 35791219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 22846272 - 22846216
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||| ||||| ||| ||||||||| ||| ||||||||||||||||||||||||    
T  22846272 tgtaatttaaagatctttggttttggaccttcttgaattttgactgtacaaaatcga 22846216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 28781914 - 28781851
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||  |||| ||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  28781914 tgtaatttgaagtattttggttttagaccttcatgaattttgaccgtacaaaatcgataatatg 28781851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 569
Target Start/End: Complemental strand, 31260928 - 31260847
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaa 569  Q
    |||||||| |||||||   ||||||| | ||||| ||||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  31260928 tgtaatttaaagatttacggttttggtccttcataaattt-gactgtacagaatcgatgatatgataggagggtaaaccaaaa 31260847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 604 - 666
Target Start/End: Complemental strand, 41567415 - 41567353
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||||| | ||||||||||||||||| ||| |||||| || |||||||| ||||||||    
T  41567415 ctcaaattacatgaggcgaaagtaccttaaattttgaaatttgataccataaagatccaaaat 41567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 439 - 484
Target Start/End: Original strand, 966566 - 966611
Alignment:
Q  439 gttaatatatgtttaccctgtaatattagcgatttctggtttaccc 484  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||    
T  966566 gttaatatatgtttatcatgtaatattaccgatttctggtttaccc 966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 597 - 665
Target Start/End: Original strand, 11915181 - 11915249
Alignment:
Q  597 aaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||| |||||||||||| ||||||||||| ||||||| |||  ||||| ||| ||| |||||||||||    
T  11915181 aaattctctcaaattacacggggcgaaagtgccttaaattttgtaatttgatgtcatgaaggtccaaaa 11915249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 29878973 - 29878909
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| ||| ||||| ||| || ||||||||||| |||||||||| |||||||||    
T  29878973 tgtaatttgaagattctttggttttagacctttatgaattttgattgtacaaaattgatgatatg 29878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 31989436 - 31989500
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||| | ||| ||||| ||| |||||||||| |||| |||||||||||||||||||    
T  31989436 tgtaatttgaagaatctttggttttcgaccttcatgaattatgaccgtacaaaatcgatgatatg 31989500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 550
Target Start/End: Original strand, 16138933 - 16138976
Alignment:
Q  507 ttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||    
T  16138933 ttttggaccttcatgaattttgactctacaaaatcgaagatatg 16138976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 35790997 - 35791047
Alignment:
Q  436 agggttaatatatgtttaccc-tgtaatattagcgatttctggtttacccc 485  Q
    |||||||||| || ||||||| ||||||||||||||||||| |||||||||    
T  35790997 agggttaatacatctttacccctgtaatattagcgatttcttgtttacccc 35791047  T

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Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 523 - 553
Target Start/End: Complemental strand, 41567465 - 41567435
Alignment:
Q  523 attttgactgtacaaaatcgatgatatgata 553  Q
    |||||||||||||||||||||||||||||||    
T  41567465 attttgactgtacaaaatcgatgatatgata 41567435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 18155484 - 18155419
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||| ||||||| ||| ||||||||| ||||| || ||||||| ||||||| |||||||||||    
T  18155484 tgtaattcgaagattctttggttttggaccttcataaactttgactatacaaaaccgatgatatga 18155419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 665
Target Start/End: Original strand, 31397428 - 31397489
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    |||||||||||||||||||||||| | |||| ||| |||||| | | ||| |||||||||||    
T  31397428 ctcaaattacaaggggcgaaagtatcataaattttgaaatttgacgtcatgaaggtccaaaa 31397489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 3e-48; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 489 - 666
Target Start/End: Complemental strand, 25125047 - 25124870
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca-gg 587  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||  |||| |||||||  |||||||||||||||| || ||    
T  25125047 taatttgaagatttttggtttttgaccttcatgaattttgactgtacaaaatcgatgatatggaaggg-ggtaaactgaaatatcgatgatatggcaggg 25124949  T
Q  588 ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||  |||||| || ||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  25124948 ggtaaactgaaattctcccaaattacaaggggcgaaagtaccttaaattttataatttgatgccatgaaggtccaaaat 25124870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 487 - 764
Target Start/End: Original strand, 17030611 - 17030887
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |  |||||||| |  |||||||||||||||| |||    
T  17030611 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaatgatatg-tcaggtggtaacctgaaatatcgatgatatggcag 17030709  T
Q  587 g-ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaatta 685  Q
    | |||||| | ||||| |||||| |||| ||||| |||||||||||||| |||  ||||| ||||||| ||||||||||||        |||| ||||||    
T  17030710 gaggtaaaccaaaattctctcaatttac-aggggtgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaatcaaaaaaatctttaaatta 17030808  T
Q  686 catggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
     | |||||||||| ||||||| || |||||     | |||| |||||||| ||||||||| |   ||||||||||||||    
T  17030809 gagggttgaaatcaaaacaaagttttttacaggggaataaaccggaaatcgctaatattacataggggtaaacatatat 17030887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 487 - 581
Target Start/End: Original strand, 25158871 - 25158964
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatat 581  Q
    ||||||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||  | || ||||||| ||||||||||||||||    
T  25158871 tgtaatttgaatattcttggttttggacattcatgaattttgactgtacaaaatcgatgatatggcaagg-ggtaaactaaaatatcgatgatat 25158964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 558 - 781
Target Start/End: Complemental strand, 55257852 - 55257628
Alignment:
Q  558 ggtaaaccaaaatatcgatgatatgacaggggt--aaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataa 655  Q
    |||||||  |||||||||||||||| |||||||  |||  |||||| | |||||||| ||||||||||||||||||||| |||  ||||| ||||||| |    
T  55257852 ggtaaactgaaatatcgatgatatggcaggggtgtaaactgaaattctatcaaattataaggggcgaaagtaccttaaattttgtaatttgatgccatga 55257753  T
Q  656 aggtccaaaatnnnnnnnntcttcaaattacatggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattata-ggagggt 754  Q
    |||||||||||        ||||||||||| | ||||| |||| |||||| ||| ||||| |    ||||| |||||||| ||||||||| | || ||||    
T  55257752 aggtccaaaat-aaaaaaatcttcaaattatagggttggaatctaaacaattttttttac-agggggtaaaccggaaatcgctaatattacagggggggt 55257655  T
Q  755 aaacatatatcaacactaaatattatt 781  Q
    |||||||||| ||| ||||||||||||    
T  55257654 aaacatatattaaccctaaatattatt 55257628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 484 - 556
Target Start/End: Original strand, 28735522 - 28735594
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||| ||||    
T  28735522 ccatgtaatttgaagatttttggttttggaccttcatgaattttggctgtacaaaatcgaagatatgacaggg 28735594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 300250 - 300332
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||    
T  300250 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatcataggg-ggtaaaccaaaat 300332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 13041656 - 13041593
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  13041656 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13041593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 13049733 - 13049670
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  13049733 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13049670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 31293745 - 31293682
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  31293745 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 31293682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 52839592 - 52839529
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  52839592 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 52839529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 52962313 - 52962395
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  52962313 tgtaatttgaaattttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgataggg-ggtaaacctaaat 52962395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 19111233 - 19111164
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||| ||||    
T  19111233 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtataaaatcgaagatatgacaggg 19111164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 32721800 - 32721731
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  32721800 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 32721731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 567 - 666
Target Start/End: Original strand, 17582473 - 17582573
Alignment:
Q  567 aaatatcgatgatatgacagg-ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    |||||||||| ||||| |||| |||||| ||||| | |||||||||||||||||||||||||||||||| |||  ||||| |||| || |||||||||||    
T  17582473 aaatatcgattatatggcaggaggtaaaccgaaaatctctcaaattacaaggggcgaaagtaccttaaattttgtaatttgatgctatgaaggtccaaaa 17582572  T
Q  666 t 666  Q
    |    
T  17582573 t 17582573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 2985790 - 2985727
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||    
T  2985790 tgtaatttgaagttttttggttttagaccttcatgaattttgactgtacaaaatcgatgatatg 2985727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 14870223 - 14870160
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||    
T  14870223 tgtaatttgaagatttttcgttttggacctttatgaattttgactgtacaaaatcgaagatatg 14870160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 22817964 - 22818027
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  22817964 tgtaatttgaagatttttggttttggaccttcatgaattttgactatacaaaatcgaagatatg 22818027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 13439857 - 13439795
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||    
T  13439857 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 13439795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 489 - 550
Target Start/End: Complemental strand, 22438892 - 22438831
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||    
T  22438892 taatttgaagatttttagttttggacatacatgaactttgactgtacaaaatcgattatatg 22438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 521 - 666
Target Start/End: Original strand, 43426321 - 43426467
Alignment:
Q  521 gaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacagggg--taaaacgaaattatctcaaattacaaggg 618  Q
    |||||||||||  |||||||||||||| ||  | || | |||||  |||||||||||||||| ||||||  |||| ||||||| |||||||||||| |||    
T  43426321 gaattttgactacacaaaatcgatgatgtggcaaggag-taaactgaaatatcgatgatatggcaggggggtaaaccgaaattctctcaaattacagggg 43426419  T
Q  619 gcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    || ||||||||||||| |||  ||||| |||| || |||||| |||||    
T  43426420 gcaaaagtaccttaaattttgtaatttgatgctatgaaggtctaaaat 43426467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 43426566 - 43426510
Alignment:
Q  436 agggttaatatatgtttaccct-gtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  43426566 agggttaatatatgtttacccccgtaatattagcgatttctggtttaccccatgtaa 43426510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 5572246 - 5572183
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||    
T  5572246 tgtaatttgaagatttttgattttggaccttcatgaattttgacagtacaaaatcgaagatatg 5572183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 22447108 - 22447045
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||| |||||    
T  22447108 tgtaatttgaagatttttagttttcgacatacatgaactttgactgtacaaaatcgattatatg 22447045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 26770213 - 26770150
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  26770213 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 26770150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 31073950 - 31073887
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||||| || ||||||    
T  31073950 tgtaatttgaagatttttggttttggaccttcatgaattttgaatgtacaaaattgaagatatg 31073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 38703277 - 38703195
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||| ||||||||||| ||||||||| ||| ||||||||||| |||||||||||| ||||||  |||| |||||||||||||    
T  38703277 tgtaatctgaagatttttggttttggaccttcgtgaattttgaccgtacaaaatcgaagatatggcaggg-ggtaaaccaaaat 38703195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 7226166 - 7226236
Alignment:
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||  |||| |||||||| ||||    
T  7226166 tttttggttttggaccttcatgaattttgaatgtacaaaatcgatgatatggcaggggggtaaaccgaaat 7226236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 14004557 - 14004495
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||| |||||    
T  14004557 tgtaatttgaaaatttttggttttgaactttcatgaattttgacagtacaaaatcgaagatat 14004495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 7670570 - 7670639
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||| ||| ||||||||| || |||||||||||||| |||||||||| ||||||| ||||    
T  7670570 tgtaatttgaagatatttggttttggaccttaatgaattttgactgaacaaaatcgaagatatgacaggg 7670639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 585 - 666
Target Start/End: Complemental strand, 23070177 - 23070096
Alignment:
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||| ||||| ||| ||  ||||| ||||||    
T  23070177 aggggtaaatcgaaattctctcaaattagaaggggcgaaagtaccttaaattttataatttgatgtcacgaaggttcaaaat 23070096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 482 - 550
Target Start/End: Original strand, 7272637 - 7272705
Alignment:
Q  482 ccccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| |||||||||||| ||||| ||||| ||  |||||||||| ||||||||||||||||||||||||    
T  7272637 ccccttgtaatttgaagttttttggttttagatcttcatgaattgtgactgtacaaaatcgatgatatg 7272705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 586 - 666
Target Start/End: Original strand, 7308191 - 7308270
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||| |||  ||||| ||||||| |||||| |||||    
T  7308191 ggggtaaaccgaaattctctcaaattaca-ggggcgaaagtaccttaaattttgtaatttgatgccatgaaggtcaaaaat 7308270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 16897381 - 16897325
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||    
T  16897381 tgtaatttgaagatttttggtttttgacctttatgaattttgactgtacaaaatcga 16897325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 28298250 - 28298187
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||| |||| ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  28298250 tgtaatttgatgattatttagttttagatcttcatgaattttgactgtacaaaatcgatgatat 28298187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 39218926 - 39218864
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||||||||    
T  39218926 tgtaatttgaagatttt-agttttggaccttcataaattttgaccgtataaaatcgatgatatg 39218864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 45007945 - 45008039
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatg 582  Q
    ||||||||||| ||||||||||||| || ||||||||||||||| |||||||||| | ||| ||  |||| ||||| |  ||||||||||||||||    
T  45007945 tgtaatttgaatatttttagttttgaaccttcatgaattttgaccgtacaaaatcaacgatttggcaggg-ggtaacctgaaatatcgatgatatg 45008039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 45151706 - 45151769
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||| ||||| ||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  45151706 tgtaatatgaagttttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatg 45151769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 14220661 - 14220599
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||| || |||||| ||||||||| ||||| |||||||||||||||||||||| |||||    
T  14220661 tgtaattttaatatttttggttttggaccttcataaattttgactgtacaaaatcgaagatat 14220599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 14224888 - 14224826
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||| || |||||| ||||||||| ||||| |||||||||||||||||||||| |||||    
T  14224888 tgtaattttaatatttttggttttggaccttcataaattttgactgtacaaaatcgaagatat 14224826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 571 - 653
Target Start/End: Complemental strand, 18359428 - 18359346
Alignment:
Q  571 atcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccat 653  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||  || | ||||||||||||| |||  ||||| |||||||    
T  18359428 atcgatgatatgacaggggtaatccgaaattctctcaaattacagcggactaaagtaccttaaattttgtaatttgatgccat 18359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 25124780 - 25124830
Alignment:
Q  436 agggttaatatatgttta-ccctgtaatattagcgatttctggtttacccc 485  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25124780 agggttaatatatgtttatccctgtaatattagcgatttctggttaacccc 25124830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 30226182 - 30226265
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||| ||| ||||||||  || |||||||||||| ||||||||| |||||||||| |||| ||||||| |||||    
T  30226182 tgtaatttgaagattatttggttttggatctttatgaattttgacggtacaaaattgatgatatgacaggg-ggtaaactaaaat 30226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 510 - 550
Target Start/End: Original strand, 34314776 - 34314816
Alignment:
Q  510 tggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34314776 tggaccttcatgaattttgactgtacaaaatcgatgatatg 34314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 586 - 666
Target Start/End: Original strand, 45008057 - 45008137
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||||| | |||||||||||||||||||||| ||||||| |||  ||||| ||||||  || |||||||||    
T  45008057 ggggtaaaccgaaattttatcaaattacaaggggcgaaagttccttaaattttgtaatttgatgccaagaatgtccaaaat 45008137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 14155069 - 14155006
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||   ||||||| |||||||||||| || |||||||||||| ||||||    
T  14155069 tgtaatttgaagatttttgcctttggaccttcatgaattttaaccgtacaaaatcgaagatatg 14155006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 36727885 - 36727826
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| | ||||||||| || ||||||||||| ||||||||||| ||||||||    
T  36727885 atttgaagatttctggttttggacctttatgaattttgattgtacaaaatcaatgatatg 36727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 7308129 - 7308186
Alignment:
Q  492 tttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||  ||||||||| ||||||||||||||| |||||||||| ||||||||    
T  7308129 tttgaagattttg-gttttggaccttcatgaattttgacagtacaaaatcaatgatatg 7308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 7308374 - 7308315
Alignment:
Q  436 agggttaatatatgtttaccc----tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||| ||    ||||||||||||||||||||||||||||| |||||    
T  7308374 agggttaatatatgtttaacccctctgtaatattagcgatttctggtttaccccctgtaa 7308315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 26932506 - 26932440
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| |||||| ||||||| | ||||||||| || |||||||||||| |||| ||||||||||||||    
T  26932506 ccatctaatttaaagatttctggttttggaccttgatgaattttgaccgtacgaaatcgatgatatg 26932440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 634
Target Start/End: Original strand, 37050164 - 37050210
Alignment:
Q  588 ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    |||||| |||||||  |||||||||||||||||||||||||||||||    
T  37050164 ggtaaatcgaaatttgctcaaattacaaggggcgaaagtaccttaaa 37050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 54571386 - 54571324
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||| ||||||| ||||| |||||| || ||||| ||||||||||||||| ||||||||||||    
T  54571386 tgtagtttgaagtttttttgttttgaaccttcataaattttgactgtacagaatcgatgatat 54571324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 55257638 - 55257697
Alignment:
Q  436 agggttaatatatgtttaccc----tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||    |||||||||||||||||| |||||||||| |||||    
T  55257638 agggttaatatatgtttaccccccctgtaatattagcgatttccggtttaccccctgtaa 55257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 4658764 - 4658711
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||||||||||||| ||| |||| || ||||||||||||||| |||||||||    
T  4658764 tgtaatttgaagatttctaggtttgaaccttcatgaattttgacagtacaaaat 4658711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 437 - 481
Target Start/End: Original strand, 25158790 - 25158835
Alignment:
Q  437 gggttaatatatgtttaccc-tgtaatattagcgatttctggttta 481  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  25158790 gggttaatatatgtttacccctgtaatattagcgatttttggttta 25158835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 3505293 - 3505237
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||| ||||||||| ||||||||| || |||||||||| | ||||||||||||    
T  3505293 tgtaatttaaagatttttggttttggacctttatgaattttgtccgtacaaaatcga 3505237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 586 - 666
Target Start/End: Complemental strand, 7013347 - 7013267
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| | ||||| |||||||||||| |||||||||||| |||||| |||  ||||| || |||| || |||||||||    
T  7013347 ggggtaaatctaaattctctcaaattacatggggcgaaagtatcttaaattttgtaatttgataccatgaaagtccaaaat 7013267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 23070235 - 23070188
Alignment:
Q  496 aagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  23070235 aagatttttgcttttggaccttcatgaattttgactgtataaaatcga 23070188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 25024832 - 25024769
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| |  |||||||| ||  ||||||||||| |||||||||||| ||||||    
T  25024832 tgtaatttgaagatttatgattttggacatttttgaattttgacagtacaaaatcgacgatatg 25024769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 553
Target Start/End: Complemental strand, 41423193 - 41423126
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatgata 553  Q
    |||||||| |||||| || | |||| ||| |||||||| |||||||||||||||| ||||||||||||    
T  41423193 tgtaatttaaagattatttgcttttagaccttcatgaaatttgactgtacaaaatagatgatatgata 41423126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 48689187 - 48689250
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| ||||||||| |||||||||  |||| |||||| || |||||||||||| ||||||    
T  48689187 tgtaatttaaagatttttggttttggaccgtcataaattttaaccgtacaaaatcgaagatatg 48689250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 17582245 - 17582307
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||| ||||||||| |||||| || ||||||||||||||   ||||||||| |||||||    
T  17582245 tgtaatttaaagatttttcgttttgaaccttcatgaattttgaaattacaaaatcaatgatat 17582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 597 - 666
Target Start/End: Original strand, 25159022 - 25159091
Alignment:
Q  597 aaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||| |||||||||||| | ||||||| ||||||||| |||  ||||| ||||||| || |||||||||    
T  25159022 aaattctctcaaattacaggaggcgaaaataccttaaattttgtaatttgatgccatgaacgtccaaaat 25159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 4e-47; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 487 - 764
Target Start/End: Original strand, 1853184 - 1853455
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||| | |||    
T  1853184 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggg-ggtaaa-cgaaatatcgatgataaggcag 1853281  T
Q  587 gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattac 686  Q
    |||   ||||||||| ||||||||| || ||| ||||||||||||||| ||| |||||| ||||||| ||||||||||||        ||||||||||||    
T  1853282 ggg-gtaacgaaattctctcaaatttcaggggacgaaagtaccttaaattttgaaatttgatgccatgaaggtccaaaat-caaaaaatcttcaaattac 1853379  T
Q  687 atggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
    | ||||| |||| |||||||||| ||||| |    ||||| |  ||||||||||||||| ||| ||||||||||||||    
T  1853380 aaggttggaatctaaacaaatttttttac-atgaggtaaaccaaaaatcactaatattacagg-gggtaaacatatat 1853455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 15635169 - 15635349
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||| ||||| |||||||||  | || |||||||| ||||||||||||||||  ||    
T  15635169 tgtaatttgaagatttttggttttggaccttcatgaattttaaccgtataaaatagatgatatggcatgg-ggtaaaccgaaatatcgatgatatggtag 15635267  T
Q  587 ggg--taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||  |||||||||||| |||||| ||| | |||||||||||||| |||| ||| |||||| ||| ||||||||| ||||||    
T  15635268 gggggtaaaacgaaattctctcaagttatagggggcgaaagtaccataaattttgaaatttgatggcataaaggttcaaaat 15635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 487 - 666
Target Start/End: Complemental strand, 42957642 - 42957462
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    |||||||||||||||||| ||||| ||| |||||||| ||||| ||||||||||| |||||||   ||||  ||||    ||||||||| ||||||||||    
T  42957642 tgtaatttgaagatttttggttttcgaccttcatgaactttgattgtacaaaatcaatgatatagcaggggagtaacatgaaatatcgaggatatgacag 42957543  T
Q  587 -gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
     ||||||| ||||||| |||||||||||||||| ||||||||||||||| |||  ||||| ||| ||| ||||||||||||    
T  42957542 agggtaaatcgaaattctctcaaattacaagggacgaaagtaccttaaattttgtaatttgatgtcatgaaggtccaaaat 42957462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 43393790 - 43393970
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca- 585  Q
    |||||||| ||||||||| ||||| ||| ||||||||||||||| |||||||||||| ||||||  |||| | |||||  ||||||||||| |||  ||     
T  43393790 tgtaatttaaagatttttggtttttgacattcatgaattttgaccgtacaaaatcgacgatatggaagggggataaactgaaatatcgatggtatagcag 43393889  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||  |||||| |||||  ||||||||| ||||||||||||||| |||  ||||| ||||||| ||||||||||||    
T  43393890 ggggtaaactgaaattctctcacgttacaagggtcgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaat 43393970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 10931974 - 10932069
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatg 582  Q
    ||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  10931974 tgtaatttgaagaattttggttttggaccttcatgaattttgattgtacaaaatcgatgatatgacagggtggtaaactgaaatatcgatgatatg 10932069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 542 - 764
Target Start/End: Complemental strand, 9689450 - 9689230
Alignment:
Q  542 gatgatatgatagggtggtaaaccaaaatatcgatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaa 640  Q
    ||||||||| ||||| |||||||| |||||| |||||||||  ||||| |||| ||||||| |||||||||||||||| | ||||||||||||| ||||     
T  9689450 gatgatatggtaggg-ggtaaaccgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagtaccttaaattttat 9689352  T
Q  641 aatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattacatggttgaaatcgaaacaaa-tttctttactaaatagtaaatcggaaatcacta 739  Q
    ||||| ||| ||| ||||||||||||        ||||||||||||| |||||||||| || |||| ||| |||||  |   ||||| |||||||| |||    
T  9689351 aatttgatgtcatgaaggtccaaaatcaaaaaaatcttcaaattacagggttgaaatctaaccaaattttttttac--aggggtaaaccggaaatcgcta 9689254  T
Q  740 atattataggagggtaaacatatat 764  Q
    |||||| | ||||||||||||||||    
T  9689253 atattaca-gagggtaaacatatat 9689230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 487 - 715
Target Start/End: Complemental strand, 3092509 - 3092282
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatat-gaca 585  Q
    ||||||||||||||||||   ||||||| ||||| |||||||||||||||||||||| ||||||| | || |||||| | ||||||| ||||||| ||      
T  3092509 tgtaatttgaagatttttgtatttggaccttcattaattttgactgtacaaaatcgacgatatgacatgg-ggtaaatcgaaatatcaatgatatggaag 3092411  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaatta 685  Q
    |||||||| || |||| |||||||||| | |||| |||||||||||||| |||| ||||| |||  || |||||  |||||        |||| ||||||    
T  3092410 ggggtaaaccgtaattctctcaaattatagggggtgaaagtaccttaaattttataatttgatgtaatgaaggtttaaaat-caaaaaatctttaaatta 3092312  T
Q  686 catggttgaaatcgaaacaaatttctttac 715  Q
    || |||||||||| |||||||||| |||||    
T  3092311 caaggttgaaatctaaacaaatttttttac 3092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 12005556 - 12005487
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12005556 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatcgaagatatgacaggg 12005487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 484 - 666
Target Start/End: Original strand, 27484835 - 27485021
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgata--- 580  Q
    |||||||||||||||||||||  |||||||  ||||||||||||||||||||||||| | |||||||  |  | |  |||| |||||||||||||||       
T  27484835 ccatgtaatttgaagatttttgattttggatcttcatgaattttgactgtacaaaattggtgatatggcaaagagagaaactaaaatatcgatgatatga 27484934  T
Q  581 -tgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
     ||| |||||||||  |||||| |||||||||| |  |||  |||||| |||||| |||  ||||||||||||| ||| ||||||||    
T  27484935 ttgataggggtaaactgaaattctctcaaattatagagggtaaaagtatcttaaattttttaatttaatgccatgaagatccaaaat 27485021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 20055113 - 20055049
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  20055113 tgtaatttgaagatttttggttttggactttcatgaattttgactgtacaaaattgaagatatga 20055049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 5864738 - 5864675
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  5864738 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 5864675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 495 - 657
Target Start/End: Original strand, 10975616 - 10975777
Alignment:
Q  495 gaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacagggg-taaa 593  Q
    |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||| | | | | || ||||||| ||||    
T  10975616 gaagatttttggttttcgactttcatgaactttgacagtacaaaatcgatgatatgataggg-ggtaaaccgaaat-ttgctcaaattacaggggctaaa 10975713  T
Q  594 acgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaag 657  Q
       |||||  ||||||||||||||| |||||||||| || | |||  ||||| |||||||||||    
T  10975714 cataaatttactcaaattacaagggacgaaagtaccatagattttgtaatttgatgccataaag 10975777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 13263951 - 13264014
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  13263951 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13264014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 26254850 - 26254787
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  26254850 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 26254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 31307933 - 31307996
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  31307933 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 31307996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 32200054 - 32199972
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||    
T  32200054 tgtaatttgaagttttttaattttggaccttcatgaactttgactgtacaaaatcgatgatatggtaggg-ggtaaaccgaaat 32199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 38192856 - 38192773
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||| |||||||| ||||| |||||||| ||||    
T  38192856 tgtaatttgaagttttttggttttggaccttcatgaattttgacagtacaaaatcaatgatatggtagggaggtaaaccgaaat 38192773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 2936320 - 2936226
Alignment:
Q  571 atcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||| |||  ||||| ||| ||| |||||| ||||    
T  2936320 atcgatgatatgacaggggtaaacccaaattctctcaaattacagggggcgaaagtaccttaaattttgtaatttgatgtcatgaaggtctaaaa 2936226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 442617 - 442686
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  442617 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 442686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 31864003 - 31863939
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  31864003 tgtaatttgaagttttttggttttggaccttcatgaatcttgactgtacaaaatcgatgatatga 31863939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 2240714 - 2240631
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||  ||||| ||||||||| ||||||||||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  2240714 tgtaatttgaaattttttggttttggaccttcatgaattttgacggtacaaaatcgatgatatggcaggggggtaaaccgaaat 2240631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 2241148 - 2241065
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||| |||||  |||| |||||||| ||||    
T  2241148 tgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatgtcaggggggtaaaccgaaat 2241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 2300904 - 2300967
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||    
T  2300904 tgtaatttgaagattcttgattttggaccttcatgaattttgactgtacaaaatcgatgatatg 2300967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 3401884 - 3401947
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  3401884 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 3401947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 8391045 - 8391128
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||| ||||||||  |||||||| ||||||||||||||||||||||||| |||||||||  ||||| ||||||| ||||    
T  8391045 tgtaatttgtagatttttgattttggaccttcatgaattttgactgtacaaaatagatgatatggcagggtcgtaaaccgaaat 8391128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 11576863 - 11576800
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||    
T  11576863 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacgaaatcgaagatatg 11576800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 13592789 - 13592872
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| ||| |||||| |||||||| ||||| |||||||| ||||    
T  13592789 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtataaaatcaatgatatggtagggaggtaaaccgaaat 13592872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 490 - 549
Target Start/End: Original strand, 17155693 - 17155752
Alignment:
Q  490 aatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  17155693 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 17155752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 21444158 - 21444076
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||| || ||||||| |||| |||||||||||||    
T  21444158 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtacaaaattgaagatatgacaggg-ggtaaaccaaaat 21444076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 31749402 - 31749465
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  31749402 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatg 31749465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 32946368 - 32946431
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  32946368 tgtaatttgaagttttttggttttggaccttcatgaattttaactgtacaaaatcgatgatatg 32946431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 2514205 - 2514143
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||    
T  2514205 tgtaatttgaagatttttgattttggaccttcgtgaattttgactgtacaaaatcgatgatat 2514143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 21522062 - 21522000
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  21522062 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatat 21522000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 2936376 - 2936303
Alignment:
Q  484 ccatgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||||| ||| ||||| ||| ||||| |||||||||||||||||||||||||||||| ||||    
T  2936376 ccatgtaatttgaagattctttggttttcgaccttcataaattttgactgtacaaaatcgatgatatgacaggg 2936303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 15721012 - 15721081
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  15721012 tgtaatttgatgatttttggttttggaccttcatgaattttgacagcacaaaatcgaagatatgataggg 15721081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 47370235 - 47370304
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  47370235 tgtaacttgaagattttttattttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 47370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 17051898 - 17051981
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||| ||||||  |||| |||||||||||||    
T  17051898 tgtaatttgaatattttttgattttggaccttcatgaattttgactgtacaaaatcgaagatatggcaggg-ggtaaaccaaaat 17051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 21022651 - 21022595
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  21022651 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcga 21022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 43707219 - 43707155
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||| | |||||||    
T  43707219 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaaagatatga 43707155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 20164397 - 20164314
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||| |||||   |||| |||||||| ||||    
T  20164397 tgtaatttgaatatttttggttttggaccttaatgaattttgactgtacaaaatcgaagatatagcaggggggtaaaccgaaat 20164314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 571 - 715
Target Start/End: Original strand, 24812897 - 24813042
Alignment:
Q  571 atcgatgatatgacagggg--taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnn 668  Q
    |||||||||||||||||||  |||| | ||||| | ||||||||||||||  |||||||||||||| |||  ||||| ||||| |||||||| ||||       
T  24812897 atcgatgatatgacagggggataaaccaaaattctttcaaattacaagggatgaaagtaccttaaattttgtaatttgatgccttaaaggtctaaaa-cc 24812995  T
Q  669 nnnnnntcttcaaattacatggttgaaatcgaaacaaatttctttac 715  Q
          ||||||||||||| |||||||||| |||||||||| |||||    
T  24812996 aaagaatcttcaaattacagggttgaaatctaaacaaatttttttac 24813042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 30632080 - 30632143
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| || ||||||    
T  30632080 tgtaatttgaagatttttggttttggaccttcatgaattttgactgcacaaaattgaagatatg 30632143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 31750802 - 31750884
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| ||||||  |||||||  |||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||    
T  31750802 tgtaatttgaaaattttttattttggatcttcatgaattttgactgtacaaaatcgaagatatgacaggg-ggtaaaccgaaat 31750884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 33441157 - 33441094
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | ||||||||| |||||||||||||| |||||||||| |||||||||    
T  33441157 tgtaatttgaagatttctggttttggaccttcatgaattttgattgtacaaaatagatgatatg 33441094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 35158265 - 35158328
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||    
T  35158265 tgtaatttgaagatttttgattttggaccttcatgaattttgactatacaaaatcgaagatatg 35158328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 1572815 - 1572881
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||| |||||||| ||||||||||||    
T  1572815 ccatgtaatttgaagatttctagttttggaccttcaagaactttgtctgtacaacatcgatgatatg 1572881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 571 - 660
Target Start/End: Complemental strand, 45687822 - 45687732
Alignment:
Q  571 atcgatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtc 660  Q
    ||||||||||||||||||| |||| | ||||| |||||||||| | |||| |||||||||||||| |||| ||||| ||||||| ||||||    
T  45687822 atcgatgatatgacaggggataaaccaaaattctctcaaattatagggggtgaaagtaccttaaattttataatttgatgccatgaaggtc 45687732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 45687873 - 45687792
Alignment:
Q  489 taatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||| |||||||||||||||||||| |||| | |||||||||||    
T  45687873 taatttgaagattatttcgttttagaccttcatgaattttgaccgtacaaaatcgatgatatgacaggg-gataaaccaaaat 45687792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 558 - 666
Target Start/End: Original strand, 11625115 - 11625224
Alignment:
Q  558 ggtaaaccaaaatatcgatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaa 656  Q
    |||||||| ||||||| ||||||||  ||||| |||| ||||||| || |||| |||||||||||||||||||||||| | |  ||||| ||| ||| ||    
T  11625115 ggtaaaccgaaatatcaatgatatggtagggggtaaaccgaaattctcacaaactacaaggggcgaaagtaccttaaattatgtaatttgatgtcatgaa 11625214  T
Q  657 ggtccaaaat 666  Q
    ||||||||||    
T  11625215 ggtccaaaat 11625224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 489 - 550
Target Start/End: Complemental strand, 34258397 - 34258336
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||| ||||| ||||| ||  |||||||||||||||||||||||||||||||||||    
T  34258397 taatttgaagtttttttgttttagatcttcatgaattttgactgtacaaaatcgatgatatg 34258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 9689537 - 9689474
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||  ||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||    
T  9689537 tgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatg 9689474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 10067836 - 10067899
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| |||||  |||||||| ||||| ||||||||| |||||||||||||||||||    
T  10067836 tgtaatttgaagtttttttattttggaccttcataaattttgaccgtacaaaatcgatgatatg 10067899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 20089437 - 20089355
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||  |||| | |||||||||||    
T  20089437 tgtaatttgaatatttttagttttggaccttc-tgaattttgacagtacacaatcgacgatatggcagggggctaaaccaaaat 20089355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 36374228 - 36374291
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  |||||||||| | ||||||    
T  36374228 tgtaatttgaagatttttggttttggaccttcatgaattttgatagtacaaaatcaaagatatg 36374291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 37913946 - 37913883
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| ||||||||| ||| ||||||||  |||||||||||||||| ||||||||||||||||||    
T  37913946 tgtagtttgaagatatttggttttggatcttcatgaattttgactttacaaaatcgatgatatg 37913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 38130917 - 38130980
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||| || | ||||||||||||| ||||||    
T  38130917 tgtaatttgaagatttttggttttggaccttcatgaatgttaattgtacaaaatcgaagatatg 38130980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 44448403 - 44448486
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| |  |||||||| ||||||||||||||| |||||||||||  ||||||  |||| | |||||||||||    
T  44448403 tgtaatttgaagatttctgattttggaccttcatgaattttgacagtacaaaatcggcgatatggcagggggctaaaccaaaat 44448486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 489 - 551
Target Start/End: Original strand, 28696488 - 28696550
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||| ||||| ||| |||||||| |||||| |||||||||| |||||||||    
T  28696488 taatttgaagatttttggtttttgacattcatgaactttgaccgtacaaaatcaatgatatga 28696550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 491 - 556
Target Start/End: Original strand, 17167587 - 17167652
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||| | ||||| ||||||||| ||||| |||||||||| ||||||||||||||||||| ||||    
T  17167587 atttgatgttttttggttttggacattcataaattttgactatacaaaatcgatgatatgacaggg 17167652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 25571229 - 25571176
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||    
T  25571229 tgtaatttgaagatttttggttttggacattcgtgaattttgacagtacaaaat 25571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 7967814 - 7967750
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||| ||||||| |||||||| ||||| ||||||||  ||||||||||||| |||||||||    
T  7967814 tgtaatttaaagatttctagttttgaacttttatgaatttcaactgtacaaaatctatgatatga 7967750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 9689223 - 9689274
Alignment:
Q  436 agggttaatatatgtttaccct--gtaatattagcgatttctggtttacccc 485  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  9689223 agggttaatatatgtttaccctctgtaatattagcgatttccggtttacccc 9689274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 15011882 - 15011946
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| ||| |||||| || | ||||||||||||| |||||||||||||||||||    
T  15011882 tgtaatttgaagattctttggttttgaacctgcatgaattttgacggtacaaaatcgatgatatg 15011946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 24812844 - 24812928
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| ||| ||| ||||| ||  ||||||||||||||||| ||| |||||||||||||| |||| | |||||||||||    
T  24812844 tgtaatttgaaaattcttttgttttagatcttcatgaattttgactgcacataatcgatgatatgacagggggataaaccaaaat 24812928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 586 - 634
Target Start/End: Complemental strand, 27082712 - 27082664
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||    
T  27082712 ggggtaaaccaaaattatctcaaattacagggggcgaaagtaccttaaa 27082664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 586 - 634
Target Start/End: Original strand, 27195589 - 27195637
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||    
T  27195589 ggggtaaaccaaaattatctcaaattacagggggcgaaagtaccttaaa 27195637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 41380471 - 41380527
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||  |||||||||||    
T  41380471 tgtaagttgaagattttttgttttggaccttcatgaattttgacattacaaaatcga 41380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 15994555 - 15994617
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||| ||||| |||||| ||||||    
T  15994555 tgtaatttgaagatttctagttttggaccttc-tgaattttgacagtacacaatcgacgatatg 15994617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 26202390 - 26202473
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||  |  ||||||| |||||| ||||||||||||||||||| || || | |||||||||||    
T  26202390 tgtaatttgaagttttttggttttgagccatcatgaaatttgaccgtacaaaatcgatgatatggtaaggggttaaaccaaaat 26202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 1853462 - 1853405
Alignment:
Q  436 agggttaatatatgtttaccc--tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||  ||||||||||| ||||| ||||||||| |||||||    
T  1853462 agggttaatatatgtttaccccctgtaatattagtgatttttggtttacctcatgtaa 1853405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 675 - 745
Target Start/End: Original strand, 2936361 - 2936431
Alignment:
Q  675 tcttcaaattacatggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatatta 745  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||   ||||||| ||||  |||||||||    
T  2936361 tcttcaaattacatggttgaaatctaaacaaatttttttacttaaagataaatcgaaaatttctaatatta 2936431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 14187886 - 14187824
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||| ||| || |||||||||||||||||||||| || |||||    
T  14187886 tgtaatttgaatatttttggttttagaccttaatgaattttgactgtacaaaattgaagatat 14187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 19377009 - 19377059
Alignment:
Q  436 agggttaatatatgtt-taccctgtaatattagcgatttctggtttacccc 485  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  19377009 agggttaatatatgttatcccctgtaatattagcgatttttggtttacccc 19377059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 608 - 666
Target Start/End: Original strand, 19377094 - 19377152
Alignment:
Q  608 aattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||||||||||||||||||||| |||  ||||| | ||||| ||||||||||||    
T  19377094 aattacaaggggcgaaagtaccttaaattttgtaatttgacgccatgaaggtccaaaat 19377152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 40938200 - 40938254
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||| ||||||||| ||||| ||| ||||||||||||||| ||||||||||||    
T  40938200 taatttaaagatttttggttttagaccttcatgaattttgacagtacaaaatcga 40938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 499 - 551
Target Start/End: Complemental strand, 2624852 - 2624800
Alignment:
Q  499 atttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||| |||||| || |||||||||||||| ||||||||||||| |||||||    
T  2624852 atttttggttttgtaccttcatgaattttgattgtacaaaatcgaagatatga 2624800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 46146337 - 46146281
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||   |||| ||||||||| ||||| ||||||||||||||||||||||    
T  46146337 tgtaatttgaattctttttgttttggaccttcataaattttgactgtacaaaatcga 46146281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 24233379 - 24233442
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||| |||||  ||||| ||||| ||| |||||||||||||||| || |||||||||||||||    
T  24233379 tgtaacttgaaattttttggttttagaccttcatgaattttgactatataaaatcgatgatatg 24233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 25601984 - 25601921
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||||||||||| | ||||  || |||||||||||||||||||||| || ||||||||    
T  25601984 tgtaatttgaagatttttcggttttaaacattcatgaattttgactgtacaatattgatgatat 25601921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 568 - 634
Target Start/End: Complemental strand, 25601934 - 25601868
Alignment:
Q  568 aatatcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    ||||| |||||||| ||| |||| || ||||||| ||| |||||||| ||||||||||||| |||||    
T  25601934 aatattgatgatataacatgggtgaaccgaaattctctaaaattacagggggcgaaagtacattaaa 25601868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 42957724 - 42957667
Alignment:
Q  436 agggttaatatatgtttaccc--tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||  ||||||||||| || ||| |||||||||| |||||    
T  42957724 agggttaatatatgtttaccccctgtaatattagtgaattccggtttaccccctgtaa 42957667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 34436698 - 34436751
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    ||||||||||||||||   ||||||||| ||||||||||||||  |||||||||    
T  34436698 tgtaatttgaagatttcaggttttggaccttcatgaattttgatagtacaaaat 34436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 487 - 764
Target Start/End: Original strand, 20355097 - 20355372
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca- 585  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||     
T  20355097 tgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgatgatatggtaggg-ggtaaaccaaaatatcgatgatattgcag 20355195  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaatta 685  Q
    |||||||| |||||||   |||||||||||||||| | ||||||||||| |||  ||||| ||||||| ||||| ||||||        |||||||||||    
T  20355196 ggggtaaaccgaaattccttcaaattacaaggggcaagagtaccttaaattttttaatttgatgccatcaaggttcaaaat-caaaaaatcttcaaatta 20355294  T
Q  686 catggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
    || | ||| |||| |||| ||||| |||||   |  ||||| || ||||||||||||||| ||| || |||||||||||    
T  20355295 caggattggaatctaaac-aatttttttaccggaaggtaaaccgaaaatcactaatattagagggggttaaacatatat 20355372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 487 - 666
Target Start/End: Complemental strand, 21144240 - 21144061
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    |||||||||||||||||||| ||||||| |||||||||||| || ||||||| | |||||||||  | || ||||||| |||||||||||||||||||||    
T  21144240 tgtaatttgaagatttttaggtttggaccttcatgaattttaaccgtacaaagtagatgatatggcaagg-ggtaaactaaaatatcgatgatatgacag 21144142  T
Q  587 -gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
     ||||||| | ||||| |||||||||||||||||| ||||||| | ||| |||  ||||| ||||||| ||||||||||||    
T  21144141 agggtaaaccaaaattctctcaaattacaaggggcaaaagtacatcaaattttgtaatttgatgccatgaaggtccaaaat 21144061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 42778887 - 42779064
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    ||||||||||||| |||  |||||  || ||||||||||||| |||||||||||| ||||||||  |||| ||||| |  ||||||||||||||||| ||    
T  42778887 tgtaatttgaagaatttcggttttaaaccttcatgaattttggctgtacaaaatcaatgatatggcaggg-ggtaacctgaaatatcgatgatatgatag 42778985  T
Q  587 gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    || |||| ||||||| ||||||||||||| |||||||||||||||||| |||  ||||| ||| ||| ||||||||||||    
T  42778986 ggataaaccgaaattctctcaaattacaa-gggcgaaagtaccttaaattttgtaatttgatgtcatgaaggtccaaaat 42779064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 34309603 - 34309521
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  34309603 tgtaatttgaagttttttagttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggg-ggtaaatcaaaat 34309521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 8855480 - 8855549
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  8855480 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggtaggg 8855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 4561896 - 4561814
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||    
T  4561896 tgtaatttgaagatttttggttttggatcttcatgaattttggctgtacaaaatcgaagatatgataggg-ggtaaaccgaaat 4561814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 11721348 - 11721411
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  11721348 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 11721411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 12148201 - 12148138
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  12148201 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 12148138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 586 - 764
Target Start/End: Complemental strand, 15399796 - 15399617
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat-nnnnnnnntcttcaaatt 684  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||| |||  || ||||||||||||         ||||||||||    
T  15399796 ggggtaaatcgaaattatctcaaattacaaggggcgaaagtaccttaaattttgtaatttgatgttatgaaggtccaaaataaaaaaaaatcttcaaatt 15399697  T
Q  685 acatggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
    ||| |||||  ||| |||||||||| |||||      ||||| | |||||| ||||||||| ||||| ||||||||||||    
T  15399696 acagggttgggatctaaacaaatttttttacatggaggtaaaccagaaatcgctaatattacaggagagtaaacatatat 15399617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 31312746 - 31312664
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||    
T  31312746 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatcgaagatatgacaggg-ggtaaaccgaaat 31312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 31920142 - 31920225
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||  |||| |||||||| ||||    
T  31920142 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatgtcaggggggtaaaccgaaat 31920225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 4414009 - 4414065
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4414009 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 4414065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 35687471 - 35687407
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||    
T  35687471 tgtaatttgaagatttttgattttggactttcataaattttgacggtacaaaatcgatgatatga 35687407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 21039947 - 21040029
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||   |||| |||||||||||||    
T  21039947 tgtaatttgaatattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatagcaggg-ggtaaaccaaaat 21040029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 22756357 - 22756294
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  22756357 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatg 22756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 25233919 - 25233856
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  25233919 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 25233856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 25298079 - 25298016
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  25298079 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 25298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 31567715 - 31567778
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||    
T  31567715 tgtaatttgaagatttttggttttggaccttcaagaattttgactgtacaaaatcaatgatatg 31567778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 536 - 666
Target Start/End: Original strand, 37869442 - 37869572
Alignment:
Q  536 aaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacagg-ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    |||||| ||||||||  |||| |||||||  |||||||||||||||| |||| ||||||  |||||| |||||||||| ||||||| |||||||||||||    
T  37869442 aaaatcaatgatatgggaggg-ggtaaactgaaatatcgatgatatggcaggaggtaaatagaaattctctcaaattataaggggcaaaagtaccttaaa 37869540  T
Q  635 atttaaaatttaatgccataaaggtccaaaat 666  Q
     |||  ||||| ||| ||| ||||||||||||    
T  37869541 ttttgtaatttgatgacatgaaggtccaaaat 37869572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 38874630 - 38874548
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||||||| ||  |||||||||||||| |||||||||||| |||||||| ||||    
T  38874630 tgtaatttgaagatttttggttttggaccttcatgaatgttagctgtacaaaatcgaagatatgataggg-ggtaaaccgaaat 38874548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 41123437 - 41123374
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||    
T  41123437 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatg 41123374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 6897077 - 6896995
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||  |||||||||||| ||||||| |||| |||||||| ||||    
T  6897077 tgtaatttgaagattttttgttttggaccttcataaattttgatagtacaaaatcgaagatatgacaggg-ggtaaaccgaaat 6896995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 17885996 - 17885941
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcg 542  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  17885996 tgtaatttgaagaattttggttttggactttcatgaattttgacagtacaaaatcg 17885941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 21125167 - 21125226
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21125167 atttgtagatttctagttttggaccttcatgaattttgactgtacaaaatagatgatatg 21125226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 25962884 - 25962947
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||| ||||||    
T  25962884 tgtaatttgaagatttttggttttggaccttcatgaattttgatagtacaaaatcgaagatatg 25962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 40765466 - 40765529
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  40765466 tgtaatttgaagttttttggttttggaccttcatgaattttgattgttcaaaatcgatgatatg 40765529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 42368519 - 42368582
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||| | ||||||    
T  42368519 tgtaatttgaagattttttgttttggcccttcatgaattttgactgtacaaaatcaaagatatg 42368582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 586 - 745
Target Start/End: Complemental strand, 13153717 - 13153559
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaatta 685  Q
    |||||||| ||||||| |||||||||||||||| |||||||||| |||| |||  | ||| |||| || ||||||||||||        |||||||||||    
T  13153717 ggggtaaaccgaaattctctcaaattacaagggacgaaagtaccgtaaattttgtattttgatgctatgaaggtccaaaat-aaagaaatcttcaaatta 13153619  T
Q  686 catggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatatta 745  Q
    || ||||| |||| |||||||||| |||||  |   ||||| |||||||| |||||||||    
T  13153618 caaggttggaatctaaacaaatttttttacagagatgtaaaccggaaatcgctaatatta 13153559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 6117670 - 6117731
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  6117670 taatttgaatatttttggttttggaccttcaagaattttgactgtacaaaatcgaagatatg 6117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 493 - 550
Target Start/End: Complemental strand, 13153779 - 13153722
Alignment:
Q  493 ttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| || |||||    
T  13153779 ttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaattatatg 13153722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 23188856 - 23188776
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||| ||||||||||| ||||| ||| ||||||||||||||| |||||||||||| ||||||| |||| |||||||| ||||    
T  23188856 taatatgaagatttttggttttagaccttcatgaattttgacagtacaaaatcgaagatatgacaggg-ggtaaaccgaaat 23188776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 7577985 - 7577921
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||| | |||||||    
T  7577985 tgtaatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatcaaagatatga 7577921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 549
Target Start/End: Original strand, 23159551 - 23159611
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  23159551 taatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatcgaagatat 23159611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 546
Target Start/End: Complemental strand, 23108926 - 23108867
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatga 546  Q
    |||||||||||||||| | ||||| ||| ||||||||||||||||||||||||| |||||    
T  23108926 tgtaatttgaagatttatggttttagaccttcatgaattttgactgtacaaaatagatga 23108867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 25088841 - 25088758
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| || |||||||||||| |||||||||| | ||||||  |||| | |||||||||||    
T  25088841 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatcaacgatatggcagggggctaaaccaaaat 25088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 25146810 - 25146727
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| || |||||||||||| |||||||||| | ||||||  |||| | |||||||||||    
T  25146810 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatcaacgatatggcagggggctaaaccaaaat 25146727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 30916565 - 30916628
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| |||||  || |||||||||||||| ||||||||||||| ||||||    
T  30916565 tgtaatttgaagatttttggttttataccttcatgaattttgattgtacaaaatcgaagatatg 30916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 5818468 - 5818532
Alignment:
Q  486 atgtaatttgaagattttt-agttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||| ||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||    
T  5818468 atgtagtttgaagattttttagttttggaccttcatga-ttttgactctacaaaatcgatgatatg 5818532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 15399610 - 15399669
Alignment:
Q  436 agggttaatatatgtttac---cctgtaatattagcgatttctggtttacc-ccatgtaa 491  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||    
T  15399610 agggttaatatatgtttactctcctgtaatattagcgatttctggtttacctccatgtaa 15399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 585 - 666
Target Start/End: Original strand, 17668731 - 17668812
Alignment:
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||| | ||||| |||||||||||| ||||||||||||||||||| |||||| ||| ||  ||| || |||||||||    
T  17668731 aggggtaaaccaaaattctctcaaattacagggggcgaaagtaccttaaattttaaattttgatatcatgaaagtccaaaat 17668812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 29691043 - 29691096
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  29691043 tgtaagttgaagattttttgttttggaccttcatgaattttgactttacaaaat 29691096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Original strand, 17190799 - 17190834
Alignment:
Q  516 ttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||||||||||||||||||||||||||||||||    
T  17190799 ttcatgaattttgactgtacaaaatcgatgatatga 17190834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 530
Target Start/End: Original strand, 26243183 - 26243226
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgac 530  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  26243183 tgtaatttgaagatttttggttttggaccttcatgaattttgac 26243226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 28796429 - 28796492
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| |||||| || |||||||||||||||  || |||||||| ||||||    
T  28796429 tgtaatttgaagatttttggttttgaaccttcatgaattttgaccatataaaatcgaagatatg 28796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 541
Target Start/End: Complemental strand, 42097949 - 42097895
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatc 541  Q
    |||||||||||||||||| |||||||||| || |||||||||||  |||||||||    
T  42097949 tgtaatttgaagatttttggttttggactgtcgtgaattttgacattacaaaatc 42097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 18232053 - 18231988
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||| |||||| ||| |||||| || |||||||||||||||| |||||||||||| ||||||    
T  18232053 tgtaatttaaagattctttggttttgaaccttcatgaattttgactctacaaaatcgataatatga 18231988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 27330991 - 27331044
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||||||||| ||||| ||||| ||| || ||||||||||||||||||||||    
T  27330991 tgtaatttgaagttttttggttttagacctttatgaattttgactgtacaaaat 27331044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 506 - 551
Target Start/End: Original strand, 30907421 - 30907466
Alignment:
Q  506 gttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||    
T  30907421 gttttggaccttcatgaattttgacagtacaaaatcgacgatatga 30907466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 498 - 550
Target Start/End: Complemental strand, 8861488 - 8861436
Alignment:
Q  498 gatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||  |||| ||| |||||||||||||||||||||||||||| ||||||    
T  8861488 gatttttgattttagaccttcatgaattttgactgtacaaaatcgaagatatg 8861436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 546
Target Start/End: Complemental strand, 6527441 - 6527402
Alignment:
Q  507 ttttggactttcatgaattttgactgtacaaaatcgatga 546  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  6527441 ttttggaccttcataaattttgactgtacaaaatcgatga 6527402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 10819643 - 10819581
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| |||| |||| |||||||||||| || |||||||||||| ||||||    
T  10819643 tgtaatttgaagttttttggttt-ggaccttcatgaatttttaccgtacaaaatcgaagatatg 10819581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 645
Target Start/End: Original strand, 17190822 - 17190897
Alignment:
Q  571 atcgatgatatgacaggg-gtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaattt 645  Q
    |||||||||||||||| | || || | |||||  ||| |||||||||||| |||||||||||||| ||||||||||    
T  17190822 atcgatgatatgacagagtgttaatcaaaattcgctctaattacaaggggtgaaagtaccttaaattttaaaattt 17190897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 20628213 - 20628154
Alignment:
Q  489 taatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgat 547  Q
    ||||||||||||| ||| |||||| || ||||||||||||||  ||||||||||||||||    
T  20628213 taatttgaagattatttggttttgaacattcatgaattttgatagtacaaaatcgatgat 20628154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 18232137 - 18232078
Alignment:
Q  436 agggttaatatatgtttaccc----tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||    ||||||||||| | ||||||||||||||| |||||    
T  18232137 agggttaatatatgtttaccccctctgtaatattagtggtttctggtttaccccctgtaa 18232078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 37217496 - 37217454
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttga 529  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||    
T  37217496 tgtaatttgaagatttttggttttggaccttcataaattttga 37217454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 551
Target Start/End: Original strand, 7653939 - 7654004
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||| ||||||| || | |||| |||||| ||| ||||||| |||||||||||||||||||||    
T  7653939 tgtaattcgaagattatttgattttagacttttatgtattttgattgtacaaaatcgatgatatga 7654004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 437 - 485
Target Start/End: Original strand, 21143957 - 21144008
Alignment:
Q  437 gggttaatatatgtttacc---ctgtaatattagcgatttctggtttacccc 485  Q
    ||||||||||||||||| |   ||||||||||||||||||||||| ||||||    
T  21143957 gggttaatatatgtttagcacactgtaatattagcgatttctggtctacccc 21144008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 21180164 - 21180217
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||| ||||| ||| | |||||| |||||||||||||||||| |||||||||    
T  21180164 tgtaatatgaaggtttctggttttgaactttcatgaattttgacagtacaaaat 21180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 38083046 - 38083013
Alignment:
Q  518 catgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||| ||||||||||||||||||||||||||||    
T  38083046 catgagttttgactgtacaaaatcgatgatatga 38083013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 497 - 570
Target Start/End: Original strand, 41958927 - 41959000
Alignment:
Q  497 agatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||| | ||||||||| || |||||||||||| |||||||||||| ||||||  | || | |||||||||||    
T  41958927 agatttctggttttggacctttatgaattttgacagtacaaaatcgacgatatggcaaggggctaaaccaaaat 41959000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 9662768 - 9662948
Alignment:
Q  487 tgtaatttgaa-gatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgac- 584  Q
    ||||||||||| ||||||| ||||||||| || |||||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||     
T  9662768 tgtaatttgaaagattttttgttttggacctttatgaattttgactgtacaaagtcgacgatatgataggg-ggtaaaccaaaatatcaatgatatgaca 9662866  T
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||||  |||||| |||||||||||| ||||| ||||||||||||| |||  ||||| ||| ||| ||||| ||||||    
T  9662867 aggggtaaactgaaattctctcaaattacagggggcaaaagtaccttaaattttgtaatttgatgtcatgaaggttcaaaat 9662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 25166934 - 25167115
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca 585  Q
    |||||||| |||||||||   |||||||| || ||||||||||||| ||||||||||||||||||| | || |||||||  ||||||||||  |||| |     
T  25166934 tgtaatttaaagatttttttattttggacctttatgaattttgactatacaaaatcgatgatatgacaagggggtaaactgaaatatcgatcctatggcg 25167033  T
Q  586 gg-ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    || |||||| ||||||| |||||||||||||||| ||||||||||||||| |||  ||||| ||||||| ||| ||||||||    
T  25167034 ggaggtaaaccgaaattctctcaaattacaagggacgaaagtaccttaaattttgtaatttgatgccatgaagatccaaaat 25167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 9044481 - 9044661
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaatttt-gactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca 585  Q
    ||||||||||||| ||||  |||||||| |||||||||||| |||| ||||||||||||||||||  | || |||||||  |||||||||||||||| ||    
T  9044481 tgtaatttgaagaattttgattttggaccttcatgaatttttgactatacaaaatcgatgatatggcaagg-ggtaaactgaaatatcgatgatatggca 9044579  T
Q  586 gggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||| |||| | ||||| |||||||||||  | || ||||||| |||||| | || ||||| ||||||| ||||||||||||    
T  9044580 gggggtaaaccaaaattctctcaaattacgggaggtgaaagtatcttaaattatataatttgatgccatgaaggtccaaaat 9044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 1227759 - 1227841
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  1227759 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgataggg-ggtaaaccgaaat 1227841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 8237721 - 8237804
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||    
T  8237721 tgtaatttgaagttttttggttttggtccttcatgaattttgactgtacaaaatcgatgatatggcaggggggtaaacccaaat 8237804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 9222620 - 9222557
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  9222620 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 9222557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 7322053 - 7321971
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||  ||||||||||| |||||||| ||||    
T  7322053 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtgcaaaatcgaatatatgataggg-ggtaaaccgaaat 7321971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 10343584 - 10343643
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  10343584 atttgaagatttttggttttgtactttcatgaattttgactgtacaaaatcgaagatatg 10343643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 12292945 - 12293008
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||    
T  12292945 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaattgaagatatg 12293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 16659755 - 16659673
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| |||||| ||||| |||||||| ||||    
T  16659755 tgtaatttgaagattttttattttggaccttcatgaattttgacagtacaaaatcgaagatatggtaggg-ggtaaaccgaaat 16659673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 21544213 - 21544295
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||| | |||||||||||| |||||||| ||||    
T  21544213 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgataggg-ggtaaaccgaaat 21544295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 32217033 - 32216963
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggt 557  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| | ||||||| |||||    
T  32217033 tgtaatttgaagagttttggttttggaccttcatgaattttgactgtacaaaatcaaagatatgacagggt 32216963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 3108774 - 3108710
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||||||| ||||| |||||||| |||| ||||||||||||||||    
T  3108774 tgtaatttgaagatttttggttttggaccttcattaattttgattgtataaaatcgatgatatga 3108710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 17158406 - 17158350
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  17158406 tgtaatttgaagatttttggttttggacctccatgaattttgactgtacaaaatcga 17158350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 34414563 - 34414499
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||    
T  34414563 tgtaacttgaagattttttgttttggaccttcatgaattttaactgtacaaaatcgaagatatga 34414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 9234927 - 9234990
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||| ||||||    
T  9234927 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaactcgaagatatg 9234990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 10546155 - 10546092
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  10546155 tgtaatttgaagttttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatg 10546092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 11107825 - 11107742
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| ||||||||||  |||||||||||| || |||||||||||| ||||||  |||| | |||||||||||    
T  11107825 tgtaatttgaagatttctagttttggaacttcatgaattttaacagtacaaaatcgacgatatggcagggggctaaaccaaaat 11107742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 13729229 - 13729166
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||| |||||||| |||||||||||| ||||||    
T  13729229 tgtaatttgaagatttttggttttggaccttcatgtattttgacagtacaaaatcgacgatatg 13729166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 16119776 - 16119839
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||| ||||||    
T  16119776 tgtaatttgaagatttttggatttggaccttcatgaattttgactatacaaaatcgaagatatg 16119839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 22495992 - 22495929
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| |||||||||||| ||||||    
T  22495992 tgtaatttgaagatttttggttttggaccttcaagaattttgacggtacaaaatcgaagatatg 22495929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 26475845 - 26475928
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||| |||||   |||| |||||||| ||||    
T  26475845 tgtaatttgaatatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatagcaggggggtaaaccgaaat 26475928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 26882159 - 26882222
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  26882159 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 26882222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 553
Target Start/End: Original strand, 22362701 - 22362767
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgata 553  Q
    ||||||||||||| || | ||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  22362701 tgtaatttgaagacttatggttttggaccttcatgaattttgaccgtacaaaatcgaagatatgata 22362767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 2270535 - 2270591
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  2270535 tgtaattcaaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 2270591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 9676513 - 9676449
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||| ||||||||| ||||||||  ||||||||||||||||||| |||||||| |||||||    
T  9676513 tgtaatttaaagatttttggttttggatcttcatgaattttgactgtataaaatcgaagatatga 9676449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 18591412 - 18591348
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||| |||||||||||||  |||||||| ||||||||||||||||||||||||| || |||||||    
T  18591412 tgtattttgaagatttttgattttggacattcatgaattttgactgtacaaaattgaagatatga 18591348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 32603776 - 32603721
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  32603776 tgtaatttgaagattttg-gttttggaccttcatgaattttgactgtacaaaatcga 32603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 686584 - 686521
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||||| ||||||    
T  686584 tgtaatttgaagatttttgattttggaccttcataaattttgactgtataaaatcgaagatatg 686521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 29942608 - 29942671
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||  |||||||| |||||||||| |||| |||||||||||| ||||||    
T  29942608 tgtaatttgaagatttttgattttggaccttcatgaattctgacagtacaaaatcgaagatatg 29942671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 496 - 550
Target Start/End: Original strand, 14291163 - 14291217
Alignment:
Q  496 aagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  14291163 aagatttttggttttggaccttcatgaattttgactatacaaaatcgaagatatg 14291217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 588 - 653
Target Start/End: Complemental strand, 3816667 - 3816602
Alignment:
Q  588 ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccat 653  Q
    |||||| | ||||| |||||||||||| ||||||||||||||||||| |||| ||||| |||||||    
T  3816667 ggtaaaccaaaattttctcaaattacagggggcgaaagtaccttaaattttataatttgatgccat 3816602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 18274395 - 18274331
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| || | ||||| |||||||| |||||| ||||||||||||||||||||||    
T  18274395 tgtaatttgaagattctttgattttgaactttcattaattttaactgtacaaaatcgatgatatg 18274331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 33708845 - 33708789
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcga 543  Q
    ||||||||||| ||||||  | |||||| ||||||||||||||||||||||||||||    
T  33708845 tgtaatttgaatatttttgatcttggaccttcatgaattttgactgtacaaaatcga 33708789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 544
Target Start/End: Original strand, 11197734 - 11197792
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgat 544  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||||| |||||||||||||    
T  11197734 tgtaatttgaagattgtttggatttagactttcatgaattttgaccgtacaaaatcgat 11197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 18592095 - 18592156
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| ||||||||| |||||| ||||||| |||| |||||| | ||||||    
T  18592095 taatttgaagatttttggttttggaccttcatggattttgattgtataaaatcaaagatatg 18592156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 34077608 - 34077556
Alignment:
Q  517 tcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||    
T  34077608 tcatgaattttgactgtacaaaatcgaagatatggtaggg-ggtaaaccgaaat 34077556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 1208687 - 1208623
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||| ||||||| || || ||||||||| || |||||| ||||||||||||||||||||| ||||    
T  1208687 tgtactttgaagtttcttggttttggacattgatgaatattgactgtacaaaatcgatgaaatga 1208623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 3816821 - 3816763
Alignment:
Q  436 agggttaatatatgtttaccct---gtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||| ||||||| |||   |||||||||||||||||||||||||||| |||||    
T  3816821 agggttaatacatgtttatcctcatgtaatattagcgatttctggtttaccccctgtaa 3816763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 555
Target Start/End: Original strand, 13462702 - 13462770
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagg 555  Q
    |||||||||||| ||||| ||| |  || ||||||||||||||||||| |||||| |||||||| ||||    
T  13462702 tgtaatttgaagctttttggttctaaaccttcatgaattttgactgtataaaatcaatgatatggtagg 13462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 440 - 483
Target Start/End: Complemental strand, 18274478 - 18274434
Alignment:
Q  440 ttaatatatgtttaccc-tgtaatattagcgatttctggtttacc 483  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||    
T  18274478 ttaatatatgtttacccctgtaatattagcgatgtctggtttacc 18274434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 6e-40; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 487 - 666
Target Start/End: Complemental strand, 25060082 - 25059903
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca- 585  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||  |||| ||||| |  |||||||||||||||||||     
T  25060082 tgtaatttgaagatttttagttttgaaccttcatgaattttgattgtacaaaatcaatgatatggcaggg-ggtaacctgaaatatcgatgatatgacag 25059984  T
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||||  |||||||||||||||||||||| ||||||||| |||  ||||| ||| | | ||||||||||||    
T  25059983 ggggtaaaccgaaatgctctcaaattacaaggggcgaaaataccttaaattttgtaatttgatgtcttgaaggtccaaaat 25059903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 571 - 666
Target Start/End: Original strand, 13436984 - 13437079
Alignment:
Q  571 atcgatgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| |||  ||||| ||| ||| ||||||||||||    
T  13436984 atcgatgatatgacaggggtaaaccaaaattctctcaaattacaaggggcgaaagtaccttaaattttgtaatttgatgtcatgaaggtccaaaat 13437079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 489 - 764
Target Start/End: Original strand, 5469375 - 5469650
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatat--gacag 586  Q
    |||||||||||||||||||||||||  ||||| |||||||||  |||||||||||||||||   | || | ||||   ||||||| |||||||   |  |    
T  5469375 taatttgaagatttttagttttggatcttcattaattttgaccatacaaaatcgatgatatagcaaggggataaattgaaatatcaatgatatagtaggg 5469474  T
Q  587 gggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattac 686  Q
    ||||||| ||||||| ||||| |||||| ||||| ||| ||||||||| |||  | ||| ||||||| ||||||||||||          ||||||||||    
T  5469475 gggtaaaccgaaattctctcatattacagggggcaaaaataccttaaattttgtagtttgatgccatgaaggtccaaaatcaaaaaaa-attcaaattac 5469573  T
Q  687 atggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
    | ||||| |||| |||||| ||| |||||   | |||||| |||||||| ||||||||| |||| |||||||||||||    
T  5469574 aaggttggaatctaaacaattttttttacaggaaagtaaaccggaaatcgctaatattaaagga-ggtaaacatatat 5469650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 13436932 - 13437013
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||| |||  |||||||||||||    
T  13436932 tgtaatttgaagattttttgttttagaccttcatgaattttgattgtacaaaatcgatgatatgacagg--ggtaaaccaaaat 13437013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 26190813 - 26190876
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  26190813 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 26190876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 5932044 - 5932107
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||    
T  5932044 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatg 5932107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 9209657 - 9209740
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||   |||| |||||||| ||||    
T  9209657 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatagcaggggggtaaaccgaaat 9209740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 16420995 - 16421078
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| ||||||||||| || |||||||||||| |||||||||||| ||||||  |||| | |||||||||||    
T  16420995 tgtaatttgaagatttctagttttggacctttatgaattttgacagtacaaaatcgacgatatggcagggggctaaaccaaaat 16421078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 47641978 - 47641895
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||||    
T  47641978 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtacaacatcaatgatatggtagggaggtaaaccgaaat 47641895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 23161908 - 23161989
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||  |||  |||||||||||||    
T  23161908 tgtaatttgaagatttttgattttggaccttcatgaattttgacggtacaaaatcgaagatatggcagg--ggtaaaccaaaat 23161989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 14910051 - 14909988
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| |||||  |||||||| |||||||||||| ||||||||||||||||||||||    
T  14910051 tgtaatttgaagttttttgcttttggaccttcatgaattttaactgtacaaaatcgatgatatg 14909988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 21770837 - 21770900
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||  | |||||||||||||||||||||||||||| ||||||    
T  21770837 tgtaatttgaagatttttggttttgtgccttcatgaattttgactgtacaaaatcgaagatatg 21770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 22387468 - 22387405
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  22387468 tgtaatttaaagatttttggttttggaccttcaagaattttgactgtacaaaatcgaagatatg 22387405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 41189919 - 41190001
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||| ||| |||||| |||||||| ||||||||||||||||||| ||||| |||||||| ||||    
T  41189919 tgtaatttgaagatttatggttttagaccttcatggattttgacggtacaaaatcgatgatatggtaggg-ggtaaaccgaaat 41190001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 44961088 - 44961151
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||||||||||||||| ||||||    
T  44961088 tgtaatttgaagattttttattttggaccttcatggattttgactgtacaaaatcgaagatatg 44961151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 47231199 - 47231262
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||| |||||    
T  47231199 tgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatg 47231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 5457163 - 5457225
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||| |||||    
T  5457163 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5457225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 20158942 - 20158880
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  20158942 tgtaatttgaatatttttggttttggaccttcatgaattttgaccgtacaaaatcgaagatat 20158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 26399149 - 26399087
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| || |||||    
T  26399149 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaattgaagatat 26399087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 22152129 - 22152076
Alignment:
Q  497 agatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  22152129 agatttttagttttgcacctttatgaattttgactgtacaaaatcgatgatatg 22152076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 21853817 - 21853758
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| ||||| ||||||||  |||||||||||||||| ||||||||||||||||||    
T  21853817 atttgaagttttttggttttggatcttcatgaattttgactatacaaaatcgatgatatg 21853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 30147148 - 30147231
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||| | ||||||||| || |||||||||||| |||||||||||| ||||||  |||  | |||||||||||    
T  30147148 tgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatcgacgatatggcaggaggctaaaccaaaat 30147231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 33864133 - 33864196
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||||||| ||| |||||| |  ||||||||||||||||||||||||||||||||||    
T  33864133 tgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatcgatgatat 33864196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 33916789 - 33916726
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||||||| ||| |||||| |  ||||||||||||||||||||||||||||||||||    
T  33916789 tgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatcgatgatat 33916726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 6284471 - 6284409
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| ||||||  |||||||| ||||||||||||||||| |||||||||| |||||    
T  6284471 tgtaatttgaatatttttgattttggaccttcatgaattttgactgcacaaaatcgaagatat 6284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 12126211 - 12126273
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||| |||||||  |||||||  |||||||||||||| |||||||||||||||||||    
T  12126211 tgtaatttgacgattttttattttggatcttcatgaattttgattgtacaaaatcgatgatat 12126273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 15336787 - 15336703
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtgg-taaaccaaaat 570  Q
    |||||||||||||||| |  |||||||| || |||||||||||| |||||||||||| ||||||  |||| || |||||||||||    
T  15336787 tgtaatttgaagatttctgattttggacctttatgaattttgacagtacaaaatcgacgatatggcaggggggctaaaccaaaat 15336703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 22315144 - 22315202
Alignment:
Q  436 agggttaatatatgtttac---cctgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||| || |||||    
T  22315144 agggttaatatatgtttactcccctgtaatattagcgatttctggtttactccctgtaa 22315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 585 - 665
Target Start/End: Original strand, 33864202 - 33864282
Alignment:
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||| ||||||| ||  |||||||| | ||||||| ||||||||| |||  ||||| |||||||||||||||||||    
T  33864202 aggggtaaaccgaaattctcgaaaattacaggaggcgaaaataccttaaattttgtaatttgatgccataaaggtccaaaa 33864282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 585 - 665
Target Start/End: Complemental strand, 33916720 - 33916640
Alignment:
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||| ||||||| ||  |||||||| | ||||||| ||||||||| |||  ||||| |||||||||||||||||||    
T  33916720 aggggtaaaccgaaattctcgaaaattacaggaggcgaaaataccttaaattttgtaatttgatgccataaaggtccaaaa 33916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 563
Target Start/End: Complemental strand, 46529053 - 46528977
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaa 563  Q
    |||||| |||||| |||| ||||||||| ||||||||||||| |||||||| ||||| ||||||  |||| ||||||    
T  46529053 tgtaatgtgaagaattttggttttggaccttcatgaattttggctgtacaatatcgaagatatggcagggaggtaaa 46528977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 558 - 634
Target Start/End: Complemental strand, 17890279 - 17890201
Alignment:
Q  558 ggtaaaccaaaatatcgatgatatgaca--ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    |||||||  |||||||||||||||||||  | |||||| ||||||| ||||||||||||| || || ||||||||||||    
T  17890279 ggtaaactgaaatatcgatgatatgacatagaggtaaaccgaaattctctcaaattacaatggacggaagtaccttaaa 17890201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 27665999 - 27666062
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||| ||| |||||||||||| || ||| |||||||| ||||||    
T  27665999 tgtaatttgaagatttttggttttcgaccttcatgaatttttacagtagaaaatcgaagatatg 27666062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 574 - 664
Target Start/End: Original strand, 44228413 - 44228503
Alignment:
Q  574 gatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaa 664  Q
    ||||||||| |||||| |||| |||||||  || |||||||| ||||||||||||||||||| ||| |||||| ||||||  ||||||||||    
T  44228413 gatgatatgccagggggtaaaccgaaatttgcttaaattaca-ggggcgaaagtaccttaaattttgaaatttgatgccacgaaggtccaaa 44228503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 516 - 570
Target Start/End: Complemental strand, 16639696 - 16639643
Alignment:
Q  516 ttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||| ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  16639696 ttcatggattttgactgtacaaaatcaataatatgataggg-ggtaaaccaaaat 16639643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 550
Target Start/End: Original strand, 31883552 - 31883606
Alignment:
Q  496 aagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| |||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  31883552 aagaattttggttttggaccatcatgaattttgactgtacaaaatcgaagatatg 31883606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 551
Target Start/End: Original strand, 9240549 - 9240614
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    ||||||||||||||| || | |||||||| || |||||||||||||||| |||||| |||||||||    
T  9240549 tgtaatttgaagattctttgattttggacctttatgaattttgactgtataaaatcaatgatatga 9240614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 44228357 - 44228421
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||| |||||| ||| ||||||||| |||||||||||||||||  |||||| |||||||||    
T  44228357 tgtaatttaaagattctttggttttggaccttcatgaattttgactgggcaaaattgatgatatg 44228421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 664
Target Start/End: Original strand, 5882997 - 5883056
Alignment:
Q  605 tcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaa 664  Q
    ||||||||  |||||||||||||||||||| |||||||||| ||| ||| ||||| ||||    
T  5882997 tcaaattatgaggggcgaaagtaccttaaattttaaaatttgatgtcatgaaggtacaaa 5883056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 556
Target Start/End: Original strand, 7261428 - 7261475
Alignment:
Q  509 ttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||| |||||||||||||  ||||||||||||||||||| ||||||    
T  7261428 ttggaccttcatgaattttgtttgtacaaaatcgatgatataataggg 7261475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 45195685 - 45195622
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | |||||| || ||||||||||||||  |||||||||| || |||||    
T  45195685 tgtaatttgaagatttctggttttgaaccttcatgaattttgatcgtacaaaatcaataatatg 45195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 47980057 - 47979975
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| |||||  |  ||||| ||||||||| ||||||||||||  |||||| | ||||||||||| ||||    
T  47980057 tgtaatttgaagattttttgttttaaatcttcataaattttgaccgtacaaaatcgaaaatatgaca-ggtggtaaaccgaaat 47979975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 1701213 - 1701151
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||| ||||||||| |||| |||| ||||||||||||||  ||||||| ||||| ||||    
T  1701213 tgtaatttaaagatttttggtttaggaccttcatgaattttgagcgtacaaactcgataatat 1701151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 33465250 - 33465299
Alignment:
Q  436 agggttaatatatgtttaccc--tgtaatattagcgatttctggtttacc 483  Q
    |||||||||||||||||||||  ||||||||||||| ||||| |||||||    
T  33465250 agggttaatatatgtttaccccttgtaatattagcggtttcttgtttacc 33465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 436 - 482
Target Start/End: Complemental strand, 5469657 - 5469609
Alignment:
Q  436 agggttaatatatgtttacc--ctgtaatattagcgatttctggtttac 482  Q
    ||||||||||||||||||||  || |||||||||||||||| |||||||    
T  5469657 agggttaatatatgtttacctcctttaatattagcgatttccggtttac 5469609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 524
Target Start/End: Complemental strand, 17890329 - 17890292
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaat 524  Q
    ||||||||||||||||||||||||| || |||||||||    
T  17890329 tgtaatttgaagatttttagttttgaaccttcatgaat 17890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 9e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 489 - 666
Target Start/End: Original strand, 8809963 - 8810140
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacaggg 588  Q
    ||||||||||||||||||||||| || |||||||||||| | ||||||||||| ||||||||| |||| ||||| |  |||||||||||| |||| ||||    
T  8809963 taatttgaagatttttagttttgaaccttcatgaattttaattgtacaaaatcaatgatatgacaggg-ggtaacctgaaatatcgatgacatgataggg 8810061  T
Q  589 g-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    | |||| ||||||| |||||||||||| ||| ||||||||||||||| |||| ||||| ||| ||| ||||||||||||    
T  8810062 ggtaaaccgaaattttctcaaattacacgggacgaaagtaccttaaattttataatttgatgtcatgaaggtccaaaat 8810140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 489 - 764
Target Start/End: Original strand, 5283685 - 5283958
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgaca-gg 587  Q
    |||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||| ||| | |||||| | |||||||||||||||  || ||    
T  5283685 taatttgaagatttttggttttgaaccttcatgaattttgactctacaaaatcgatgatatggtagag-ggtaaatcgaaatatcgatgatattgcaggg 5283783  T
Q  588 ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattaca 687  Q
    |||||| |||||||   |||||||||||||||| | ||||||||||| |||  ||||| ||||||| ||||| ||||||        |||||||||||||    
T  5283784 ggtaaaccgaaattccttcaaattacaaggggcaagagtaccttaaattttttaatttgatgccatgaaggttcaaaat-caaaaaatcttcaaattaca 5283882  T
Q  688 tggttgaaatcgaaacaaatttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatat 764  Q
     | ||| |||| |||| ||||| |||||   |  ||||| || ||||||||||||||| ||| || |||||||||||    
T  5283883 ggattggaatctaaac-aatttttttacaggaaggtaaaccgaaaatcactaatattagagggggttaaacatatat 5283958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 487 - 666
Target Start/End: Original strand, 42161298 - 42161478
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacag 586  Q
    ||||||||||||||||||  |||| ||| |||||||||||||   ||||||||| |||||||||| || | |||||||  |||||||||||||||| |||    
T  42161298 tgtaatttgaagatttttgatttttgaccttcatgaattttgtaggtacaaaattgatgatatgacagag-ggtaaactgaaatatcgatgatatggcag 42161396  T
Q  587 g--ggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |  |||||| ||||||| ||||||||||||||| |||||||||||||||| |||  ||||| ||||| | ||||||||||||    
T  42161397 gagggtaaatcgaaattctctcaaattacaaggagcgaaagtaccttaaattttgtaatttgatgccttcaaggtccaaaat 42161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 542 - 764
Target Start/End: Complemental strand, 13555827 - 13555607
Alignment:
Q  542 gatgatatgatagggtggtaaaccaaaatatcgatgatatgacagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaa 640  Q
    ||||||||| ||||| |||||||| |||||| |||||||||  ||||| |||| ||||||| |||||||||||||||| | ||||||||||||| ||||     
T  13555827 gatgatatggtaggg-ggtaaaccgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagtaccttaaattttat 13555729  T
Q  641 aatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattacatggttgaaatcgaaacaaa-tttctttactaaatagtaaatcggaaatcacta 739  Q
    ||||| ||| ||| ||||||||||||        ||||||||||||| |||||||||| || |||| ||| |||||  |   ||||| |||||||| |||    
T  13555728 aatttgatgtcatgaaggtccaaaatcaaaaaaatcttcaaattacagggttgaaatctaaccaaattttttttac--aggggtaaaccggaaatcgcta 13555631  T
Q  740 atattataggagggtaaacatatat 764  Q
    |||||| | ||||||||||||||||    
T  13555630 atattaca-gagggtaaacatatat 13555607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 14121539 - 14121456
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||    
T  14121539 tgtaatttgaagttttttggttttggactttcatgaattttgactgtacaaaatcgatgatatggcagggaggtaaatcaaaat 14121456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 487 - 565
Target Start/End: Complemental strand, 25244652 - 25244575
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaacc 565  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25244652 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgataggg-ggtaaacc 25244575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 32682464 - 32682381
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||    
T  32682464 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcaggggggtaaaccgaaat 32682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 50773371 - 50773454
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||| |||| |||||||| ||||    
T  50773371 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgacaggggggtaaaccgaaat 50773454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 3652353 - 3652416
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  3652353 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 3652416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 17696357 - 17696275
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||  |||| |||||||||||||    
T  17696357 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatggcaggg-ggtaaaccaaaat 17696275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 30919000 - 30919063
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  30919000 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 30919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 42056061 - 42056124
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  42056061 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 42056124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 49166728 - 49166810
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  49166728 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgataggg-ggtaaaccgaaat 49166810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 18510065 - 18510134
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  18510065 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg 18510134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 2032708 - 2032625
Alignment:
Q  489 taatttgaagattttta--gttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||    
T  2032708 taatttgaagatttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcaggggggtaaaccgaaat 2032625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 487 - 563
Target Start/End: Original strand, 39152039 - 39152115
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaa 563  Q
    |||||||||||||||||| |||||| |  ||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  39152039 tgtaatttgaagattttttgttttgaatcttcatgaattttgaccgtacaaaatcgatgatatagtagggtggtaaa 39152115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 9780584 - 9780517
Alignment:
Q  484 ccatgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  9780584 ccatgtaatttgaagattatttggttttggaccttcatgaattttgactgtagaaaatcgatgatatg 9780517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 18165182 - 18165119
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||||    
T  18165182 tgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatagatgatatg 18165119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 49296294 - 49296231
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  49296294 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 49296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 7913405 - 7913343
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  7913405 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 7913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 21507908 - 21507970
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  21507908 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 21507970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 22854046 - 22854108
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  22854046 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 22854108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 487 - 565
Target Start/End: Original strand, 23184839 - 23184915
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaacc 565  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  23184839 tgtaatttgaagatttttggttt-ggaccttcatgaattttgactgtacaaaatcgaagatatgacaggg-ggtaaacc 23184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 39133169 - 39133230
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  39133169 taatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatg 39133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 30409398 - 30409334
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||| ||||| ||||||||| |||||||||||| |||||| ||||||||||||||||    
T  30409398 tgtaatttgaagttttttggttttggaccttcatgaattttaactgtataaaatcgatgatatga 30409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 5514648 - 5514565
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||||||||| ||||||||| || |||||||||||||| |||||||||| || |||  |||| |||||||| ||||    
T  5514648 tgtaatttgaagatttttggttttggacctttatgaattttgactgcacaaaatcgaagaaatggcaggggggtaaaccgaaat 5514565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 14574753 - 14574836
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||| |||||||||||| ||||||||| ||| | |||||| ||||||||||||||| ||||||| |||| |||||||| ||||    
T  14574753 tgtaaattgaagatttttggttttggaccttcgttaatttttactgtacaaaatcgaagatatgacaggggggtaaacctaaat 14574836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 16589063 - 16589146
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||| |  |||| |||| | |||||||||||    
T  16589063 tgtaatttgaatatttatagttttggaccttcatgaattttgacagtacaaaatcgacggcatgacagggggctaaaccaaaat 16589146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 41325505 - 41325443
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||| |||||    
T  41325505 tgtaatttgaatatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatat 41325443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 478 - 540
Target Start/End: Original strand, 50719663 - 50719725
Alignment:
Q  478 tttaccccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaat 540  Q
    |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  50719663 tttaccccttataatttgaagatttttggttttggaccttcatgaattttgactgtacgaaat 50719725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 500 - 565
Target Start/End: Original strand, 46088143 - 46088208
Alignment:
Q  500 tttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaacc 565  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | || ||||||||    
T  46088143 tttttggttttcgaccttcatgaattttgactgtacaaaatcgatgatatgacatgggggtaaacc 46088208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 13555914 - 13555851
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||  ||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||    
T  13555914 tgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatg 13555851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 575 - 666
Target Start/End: Complemental strand, 16876066 - 16875975
Alignment:
Q  575 atgatatgacaggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||||| ||||| |||| ||||||| |||||||||||| ||| | ||| ||||||||| |||  ||||| |||||||||||||| |||||    
T  16876066 atgatatggcagggataaaccgaaattctctcaaattacaggggacaaaaataccttaaattttgtaatttgatgccataaaggtcgaaaat 16875975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 24675362 - 24675425
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||| ||| ||||||||| ||||||||||| || ||||||||||||| ||||||    
T  24675362 tgtaatttgaagatatttggttttggaccttcatgaatttcgattgtacaaaatcgaagatatg 24675425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 605 - 715
Target Start/End: Complemental strand, 8678989 - 8678879
Alignment:
Q  605 tcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattacatggttgaaatcgaaaca 704  Q
    |||||||||||| ||||||||||||||||| |||  ||||| ||||||| ||||||||||||        ||||||||||||| ||||  |||| |||||    
T  8678989 tcaaattacaagaggcgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaataaaaaaaatcttcaaattacaaggtttgaatctaaaca 8678890  T
Q  705 aatttctttac 715  Q
    | ||| |||||    
T  8678889 attttttttac 8678879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 585 - 666
Target Start/End: Complemental strand, 9780511 - 9780430
Alignment:
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||| |||||||||||||||||||| |||  |||||||||||||| |||  ||||| |||||||  ||||| |||||    
T  9780511 aggggtaaaccgaaattatctcaaattacaggggatgaaagtaccttaaattttttaatttgatgccatgtaggtcgaaaat 9780430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 23091910 - 23091845
Alignment:
Q  487 tgtaatttgaagattttt-agttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||||| || ||||| |||||||||| ||| |||||||||||||||    
T  23091910 tgtaatttgaagattttttagttttgaaccttcataaattttgactatacgaaatcgatgatatga 23091845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 31856976 - 31857045
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||| | ||||| ||| |||||||| |||||||||||||||| || |||||| |||||    
T  31856976 tgtaatttgaagatttctggttttagaccttcatgaactttgactgtacaaaattgaagatatggtaggg 31857045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 492 - 549
Target Start/End: Original strand, 55927167 - 55927224
Alignment:
Q  492 tttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||| ||| ||||||| |||||| |||||||||||||||||||| |||||||    
T  55927167 tttgaagattcttacttttggattttcattaattttgactgtacaaaatctatgatat 55927224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 8810242 - 8810186
Alignment:
Q  436 agggttaatatatgttta-ccctgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  8810242 agggttaatatatgtttatccctgtaatattagcgatttccggtttactccctgtaa 8810186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 13555600 - 13555651
Alignment:
Q  436 agggttaatatatgtttaccct--gtaatattagcgatttctggtttacccc 485  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  13555600 agggttaatatatgtttaccctctgtaatattagcgatttccggtttacccc 13555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 26040800 - 26040717
Alignment:
Q  487 tgtaatttgaagattttta-gttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||| || | ||||  |||| |||||||||||||    
T  26040800 tgtaatttgaagatttttttgttttggaccttcatgaattttgaccgtacaaaattgaagctatggcaggg-ggtaaaccaaaat 26040717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 29104242 - 29104306
Alignment:
Q  487 tgtaatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| | |||| ||| |||||||||||| ||||||||||||||| ||||||    
T  29104242 tgtaatttgaagattttttggttttagaccttcatgaattttaactgtacaaaatcgaagatatg 29104306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 31226474 - 31226410
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatga 551  Q
    |||||||||||||||||| ||||||||| |||||||||||||   |||||||||| | |||||||    
T  31226474 tgtaatttgaagatttttggttttggaccttcatgaattttggtcgtacaaaatcaaagatatga 31226410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 4102871 - 4102934
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||||||| ||||||| |||| ||  ||||||||| |||||||||||||||||| ||||||    
T  4102871 tgtaatttgaatatttttaattttagatcttcatgaatattgactgtacaaaatcgaagatatg 4102934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 52194457 - 52194394
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||| ||||| |||||| || || |||||||||||| |||||||||| ||||||||    
T  52194457 tgtaatttgaagttttttggttttgaacctttatgaattttgaccgtacaaaatcaatgatatg 52194394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 32681990 - 32681928
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||| ||||||||| |||||  || ||||||||||||||| |||||||||||| |||||    
T  32681990 tgtaatttaaagatttttggttttaaaccttcatgaattttgacagtacaaaatcgaagatat 32681928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 489 - 550
Target Start/End: Original strand, 14946042 - 14946103
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||| ||||||||| |||||||||||||| ||||||||||  || |||||||| ||||||    
T  14946042 taatttaaagatttttggttttggactttcaagaattttgacaatataaaatcgaagatatg 14946103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 487 - 548
Target Start/End: Complemental strand, 50604164 - 50604103
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgata 548  Q
    |||||||||||||||||| ||||||||| ||  |||||||||||  ||||||||||| ||||    
T  50604164 tgtaatttgaagatttttggttttggacctttgtgaattttgaccatacaaaatcgaagata 50604103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 29172788 - 29172705
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||||||||||||| ||| |||||| || ||| ||| ||||| ||||||||||| |||||||||  |||| |||||||||||||    
T  29172788 tgtaatttgaagattctttggttttgaaccttcgtgacttttggctgtacaaaatagatgatatggaaggg-ggtaaaccaaaat 29172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 37589722 - 37589671
Alignment:
Q  436 agggttaatatatgttta--ccctgtaatattagcgatttctggtttacccc 485  Q
    ||||||||||||||||||  |||||||||||||||| ||| |||||||||||    
T  37589722 agggttaatatatgtttatcccctgtaatattagcggtttttggtttacccc 37589671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 483
Target Start/End: Complemental strand, 12324478 - 12324431
Alignment:
Q  437 gggttaatatatgtttaccc-tgtaatattagcgatttctggtttacc 483  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  12324478 gggttaatatatgtttacccctgtaatattggcgaattctggtttacc 12324431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 12388167 - 12388230
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||| | ||||||||| ||||||||| ||||||||||||||  ||||||||| || ||||||    
T  12388167 tgtaatgtaaagatttttggttttggaccttcatgaattttgatagtacaaaattgaagatatg 12388230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 17251328 - 17251411
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||||| |||||  |||||||| ||| ||||||||||| ||| |||||| |||| ||| ||||  |||||||| ||||    
T  17251328 tgtaatttgaagttttttgattttggaccttcgtgaattttgacagtataaaatcaatgacatggtaggaaggtaaaccgaaat 17251411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 21744809 - 21744876
Alignment:
Q  484 ccatgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| |||||| |||||| ||| ||||||||| ||| | ||||||||| |||||||||||||||||||    
T  21744809 ccatataatttaaagattatttggttttggaccttcttcaattttgaccgtacaaaatcgatgatatg 21744876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 549
Target Start/End: Original strand, 29700585 - 29700644
Alignment:
Q  491 atttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||| |||| |||| ||| |||||||||||| |||||||||||||||| ||||    
T  29700585 atttgaagattctttaatttttgaccttcatgaatttttactgtacaaaatcgatcatat 29700644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 665
Target Start/End: Complemental strand, 49277845 - 49277766
Alignment:
Q  586 ggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||  |||||| || |||||||||  |||| ||||||||||||| |||  ||||| ||||||| |||||||||||    
T  49277845 ggggtaaattgaaattctcgcaaattacagagggcaaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaa 49277766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 49533146 - 49533208
Alignment:
Q  487 tgtaatttgaaga-tttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    ||||||||||||| |||||  |||||||||||||| |||||||| |||||||||| ||||||||    
T  49533146 tgtaatttgaagattttttcattttggactttcat-aattttgaatgtacaaaattgatgatat 49533208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 596 - 666
Target Start/End: Original strand, 16734243 - 16734313
Alignment:
Q  596 gaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||| |||||||||||| || |||||| ||||||||| |||  ||||| ||||||| |||||| |||||    
T  16734243 gaaattctctcaaattacagggtgcgaaaataccttaaattttgtaattttatgccatgaaggtctaaaat 16734313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 38926067 - 38926120
Alignment:
Q  489 taatttgaagatttttag-ttttggactttcatgaattttgactgtacaaaatc 541  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||||||||    
T  38926067 taatttaaagattttttgattttggacattcatgaaatttgactgtacaaaatc 38926120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 507 - 556
Target Start/End: Complemental strand, 40568274 - 40568225
Alignment:
Q  507 ttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||| ||||||||||| |||| ||||||||| ||||||||| ||||    
T  40568274 ttttggaccttcatgaatttcgactttacaaaatcaatgatatgacaggg 40568225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 484 - 666
Target Start/End: Original strand, 82227 - 82409
Alignment:
Q  484 ccatgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatga 583  Q
    ||||||||||||||  ||||| ||||| ||| ||||||||||||||||||||||||| ||| |||||| | |  ||||||||||||||||||||||||      
T  82227 ccatgtaatttgaaatttttttgttttagaccttcatgaattttgactgtacaaaattgataatatgacaaga-ggtaaaccaaaatatcgatgatatag 82325  T
Q  584 cagggg-taaaacgaaattatctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    |||||| |||| ||||||| |||||||||||| ||||||||||||||||||| |||  ||||| ||  ||| ||||||||||||    
T  82326 cagggggtaaaccgaaattctctcaaattacatggggcgaaagtaccttaaattttgtaatttgatatcatgaaggtccaaaat 82409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 212595 - 212658
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  212595 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 487 - 634
Target Start/End: Complemental strand, 35042 - 34894
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgac-- 584  Q
    |||||||||||||||||  |||| |||| |||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||||||||      
T  35042 tgtaatttgaagattttgtgtttcggaccttcatgaattttgactatacaaaatcgatgatatgataggg-ggtaaactgaaatatctatgatatgacag 34944  T
Q  585 aggggtaaaacgaaattatctcaaattacaaggggcgaaagtaccttaaa 634  Q
    ||||||||| | ||||  |||||||||||| |||| ||||||||||||||    
T  34943 aggggtaaaccaaaatactctcaaattacatggggagaaagtaccttaaa 34894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 516 - 666
Target Start/End: Original strand, 25796 - 25942
Alignment:
Q  516 ttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaatatcgatgatatgacaggg--gtaaaacgaaattatctcaaattac 613  Q
    |||||||||||||| |||||||||| |||||||||| | || | |||||     |||||||||||||||||||  ||||| ||||||| |||||||||||    
T  25796 ttcatgaattttgagtgtacaaaattgatgatatgacaaggag-taaac-----tatcgatgatatgacagggtggtaaaccgaaattctctcaaattac 25889  T
Q  614 aaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaat 666  Q
    ||||||||||||||||||||| |||  ||||| ||||||| ||||||||||||    
T  25890 aaggggcgaaagtaccttaaattttgtaatttgatgccatgaaggtccaaaat 25942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 26042 - 25986
Alignment:
Q  436 agggttaatatatgtttaccctgt-aatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||  | ||||||||||||||| |||||||||| |||||    
T  26042 agggttaatatatgtttacccccttaatattagcgatttccggtttaccccttgtaa 25986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 7e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 332146 - 332215
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  332146 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgataggg 332215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 432686 - 432623
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    ||||||| |||||||||| |||||||||  |||||||||||||| |||||||||||| ||||||    
T  432686 tgtaattggaagatttttggttttggaccatcatgaattttgacggtacaaaatcgaagatatg 432623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 12550 - 12613
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  12550 tgtaatttgaagatttttggttttggacttccatgaattttgactgtacaaaatcgaagatatg 12613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 18893 - 18830
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  18893 tgtattttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 18830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 63324 - 63242
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||| | |||||||||||| |||||||| ||||    
T  63324 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgataggg-ggtaaaccgaaat 63242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 556
Target Start/End: Complemental strand, 145181 - 145114
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    ||||||||||||||||  |||||||| |||||||||| |||||||||||||| ||||||||| |||||    
T  145181 taatttgaagatttttgattttggaccttcatgaattgtgactgtacaaaatagatgatatggtaggg 145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 242622 - 242539
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||| |||||||||||| ||||||||| ||| | |||||| ||||||||||||||| ||||||| |||| |||||||| ||||    
T  242622 tgtaaattgaagatttttggttttggaccttcgttaatttttactgtacaaaatcgaagatatgacaggggggtaaacctaaat 242539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 607 - 776
Target Start/End: Original strand, 13286 - 13453
Alignment:
Q  607 aaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaatnnnnnnnntcttcaaattacatggttgaaatcgaaacaaa 706  Q
    |||||||| ||||||||||||||||||| |||  ||||| ||| ||| ||||||||||||        ||||||||||||| ||||| |||| |||||||    
T  13286 aaattacatggggcgaaagtaccttaaattttgtaatttgatgtcatgaaggtccaaaatcaaaaaaatcttcaaattacaaggttggaatctaaacaaa 13385  T
Q  707 tttctttactaaatagtaaatcggaaatcactaatattataggagggtaaacatatatcaacactaaata 776  Q
    ||| ||||| |    ||||| |  ||||| ||||||||| ||| |||||||||||||| ||| |||||||    
T  13386 tttttttac-agggggtaaaccaaaaatcgctaatattacagg-gggtaaacatatattaaccctaaata 13453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 13448 - 13391
Alignment:
Q  436 agggttaatatatgtttaccc--tgtaatattagcgatttctggtttaccccatgtaa 491  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||    
T  13448 agggttaatatatgtttaccccctgtaatattagcgatttttggtttaccccctgtaa 13391  T

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Target: scaffold0026 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 549
Target Start/End: Original strand, 84258 - 84318
Alignment:
Q  489 taatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatat 549  Q
    |||||||||||||| |  |||||||| ||||||||||| ||||||||||||||||||||||    
T  84258 taatttgaagatttctgattttggaccttcatgaatttcgactgtacaaaatcgatgatat 84318  T

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Target: scaffold0430 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 12776 - 12713
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||  ||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  12776 tgtaattcaaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatg 12713  T

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Target: scaffold0289 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 570
Target Start/End: Original strand, 6807 - 6889
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaat 570  Q
    ||||| |||| ||||||| ||||| ||| ||||||||||||||||||||||||||||  |||||| | || |||||||||||||    
T  6807 tgtaagttgatgatttttggtttttgaccttcatgaattttgactgtacaaaatcgaaaatatgacatgg-ggtaaaccaaaat 6889  T

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Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 550
Target Start/End: Original strand, 9303 - 9366
Alignment:
Q  487 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatg 550  Q
    |||||||||||  ||||| ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  9303 tgtaatttgaaattttttggttttggaccttcatgaattttgactgtataaaatcgaagatatg 9366  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 553
Target Start/End: Original strand, 316515 - 316580
Alignment:
Q  487 tgtaatttgaagatt-tttagttttggactttcatgaattttgactgtacaaaatcgatgatatgata 553  Q
    ||||||||||||||| ||| |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  316515 tgtaatttgaagattatttggttttgaactt-catgaattt-gactgtacaaaatcgatgatatgata 316580  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 665
Target Start/End: Original strand, 306678 - 306738
Alignment:
Q  604 ctcaaattacaaggggcgaaagtaccttaaaatttaaaatttaatgccataaaggtccaaaa 665  Q
    ||||||||||| |||||||||||||| |||| |||  ||||| ||||||| |||||||||||    
T  306678 ctcaaattaca-ggggcgaaagtaccataaattttgtaatttgatgccatgaaggtccaaaa 306738  T

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Target: scaffold1462 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 491 - 556
Target Start/End: Original strand, 199 - 264
Alignment:
Q  491 atttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 556  Q
    |||| ||||||| | | ||||||| ||||||||||||||| |||||||||||| |||||| |||||    
T  199 atttcaagatttctggctttggaccttcatgaattttgacagtacaaaatcgacgatatggtaggg 264  T

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