View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11980_high_1 (Length: 755)

Name: NF11980_high_1
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11980_high_1
NF11980_high_1
[»] chr5 (40 HSPs)
chr5 (64-624)||(883523-884074)
chr5 (648-754)||(883399-883505)
chr5 (1-56)||(22098265-22098320)
chr5 (1-56)||(4088453-4088508)
chr5 (1-56)||(18695328-18695383)
chr5 (7-56)||(14321967-14322016)
chr5 (4-56)||(16594385-16594437)
chr5 (1-56)||(6517722-6517777)
chr5 (1-56)||(8920088-8920143)
chr5 (1-56)||(19839992-19840047)
chr5 (1-44)||(35172339-35172382)
chr5 (1-45)||(6758797-6758841)
chr5 (1-56)||(189709-189764)
chr5 (1-36)||(611894-611929)
chr5 (1-56)||(884451-884506)
chr5 (1-36)||(6446524-6446559)
chr5 (1-56)||(6940156-6940211)
chr5 (1-56)||(9168171-9168226)
chr5 (1-56)||(10649445-10649500)
chr5 (1-56)||(11148521-11148576)
chr5 (1-56)||(16690509-16690564)
chr5 (1-56)||(19481188-19481243)
chr5 (1-36)||(20770161-20770196)
chr5 (1-56)||(21922151-21922206)
chr5 (1-56)||(27546073-27546128)
chr5 (1-44)||(40364590-40364633)
chr5 (1-36)||(41321284-41321319)
chr5 (1-56)||(42909729-42909783)
chr5 (1-56)||(43441748-43441803)
chr5 (1-31)||(37172761-37172791)
chr5 (15-56)||(1293106-1293147)
chr5 (3-56)||(3109595-3109648)
chr5 (1-42)||(6046337-6046377)
chr5 (15-56)||(14011327-14011368)
chr5 (11-56)||(29687091-29687136)
chr5 (3-56)||(31708380-31708432)
chr5 (1-42)||(38493648-38493689)
chr5 (1-50)||(41173268-41173317)
chr5 (1-34)||(41175712-41175745)
chr5 (1-50)||(43196631-43196680)
[»] chr8 (39 HSPs)
chr8 (1-56)||(25830252-25830307)
chr8 (3-56)||(13970929-13970982)
chr8 (1-56)||(67167-67222)
chr8 (7-56)||(42619989-42620038)
chr8 (1-45)||(26026917-26026961)
chr8 (1-45)||(33100475-33100519)
chr8 (1-45)||(43285969-43286013)
chr8 (1-56)||(3946250-3946305)
chr8 (1-56)||(9550414-9550468)
chr8 (1-56)||(10644808-10644863)
chr8 (1-56)||(29440528-29440583)
chr8 (1-56)||(33451569-33451624)
chr8 (1-56)||(35067170-35067225)
chr8 (1-56)||(41600319-41600374)
chr8 (1-56)||(43715885-43715939)
chr8 (2-56)||(7603671-7603725)
chr8 (7-56)||(6972165-6972214)
chr8 (7-56)||(14707356-14707405)
chr8 (1-45)||(16808602-16808645)
chr8 (4-56)||(40719653-40719704)
chr8 (1-56)||(3270885-3270940)
chr8 (1-36)||(6440111-6440146)
chr8 (1-56)||(9549205-9549260)
chr8 (1-56)||(13884167-13884221)
chr8 (5-56)||(24116050-24116100)
chr8 (1-36)||(27325787-27325822)
chr8 (1-56)||(34718125-34718180)
chr8 (1-56)||(34970217-34970271)
chr8 (1-36)||(41159895-41159930)
chr8 (1-56)||(42786666-42786721)
chr8 (1-55)||(9431292-9431345)
chr8 (2-56)||(12707159-12707213)
chr8 (10-56)||(35792079-35792125)
chr8 (1-30)||(1796520-1796549)
chr8 (1-38)||(7271879-7271916)
chr8 (1-42)||(12959962-12960002)
chr8 (1-38)||(18651398-18651435)
chr8 (1-34)||(38234039-38234072)
chr8 (1-34)||(44061749-44061782)
[»] chr4 (41 HSPs)
chr4 (1-56)||(3078914-3078969)
chr4 (1-56)||(37514138-37514193)
chr4 (1-56)||(39881037-39881091)
chr4 (1-56)||(44257736-44257791)
chr4 (1-45)||(42916671-42916715)
chr4 (1-56)||(2268514-2268568)
chr4 (1-56)||(32696795-32696850)
chr4 (5-56)||(36123470-36123521)
chr4 (1-56)||(38792896-38792950)
chr4 (1-44)||(42815426-42815469)
chr4 (1-56)||(47015017-47015072)
chr4 (3-56)||(1562545-1562597)
chr4 (4-45)||(48649539-48649580)
chr4 (1-49)||(13086039-13086087)
chr4 (1-45)||(15522375-15522419)
chr4 (5-45)||(32223952-32223992)
chr4 (4-56)||(47288092-47288144)
chr4 (1-45)||(51255767-51255811)
chr4 (1-56)||(2401620-2401675)
chr4 (1-36)||(5932770-5932805)
chr4 (1-36)||(10250522-10250557)
chr4 (1-44)||(12241080-12241122)
chr4 (1-56)||(16019486-16019541)
chr4 (1-36)||(18882981-18883016)
chr4 (1-36)||(28458383-28458418)
chr4 (1-36)||(30170026-30170061)
chr4 (1-44)||(33820343-33820385)
chr4 (1-56)||(36512852-36512906)
chr4 (1-56)||(36812410-36812464)
chr4 (1-36)||(38338928-38338963)
chr4 (1-56)||(38864742-38864797)
chr4 (1-56)||(47519727-47519781)
chr4 (1-36)||(50890080-50890115)
chr4 (1-56)||(55595959-55596013)
chr4 (1-36)||(55609172-55609207)
chr4 (1-56)||(55996432-55996486)
chr4 (6-56)||(39654829-39654879)
chr4 (3-36)||(39478464-39478497)
chr4 (1-34)||(40609642-40609675)
chr4 (3-56)||(43358623-43358675)
chr4 (4-37)||(51734642-51734675)
[»] chr3 (50 HSPs)
chr3 (1-56)||(29917030-29917085)
chr3 (1-56)||(29966183-29966238)
chr3 (1-56)||(37894249-37894304)
chr3 (1-56)||(49021721-49021776)
chr3 (3-56)||(48353006-48353059)
chr3 (1-56)||(29573362-29573417)
chr3 (7-56)||(19150331-19150380)
chr3 (1-46)||(27718792-27718837)
chr3 (5-46)||(44963829-44963870)
chr3 (15-56)||(54099377-54099418)
chr3 (1-45)||(26452729-26452773)
chr3 (1-56)||(7221-7275)
chr3 (1-44)||(14207264-14207307)
chr3 (1-44)||(14215012-14215055)
chr3 (1-56)||(26996326-26996381)
chr3 (1-56)||(45186558-45186613)
chr3 (5-56)||(52714743-52714794)
chr3 (1-56)||(55400009-55400064)
chr3 (2-56)||(31017402-31017455)
chr3 (3-44)||(33796288-33796329)
chr3 (1-53)||(44813454-44813504)
chr3 (1-45)||(10811156-10811200)
chr3 (4-56)||(31931028-31931080)
chr3 (1-37)||(45293035-45293071)
chr3 (1-36)||(5244258-5244293)
chr3 (1-56)||(11335309-11335363)
chr3 (1-36)||(16479661-16479696)
chr3 (1-44)||(17550161-17550204)
chr3 (1-36)||(26014841-26014876)
chr3 (1-36)||(37927211-37927246)
chr3 (1-36)||(41505520-41505555)
chr3 (1-36)||(44413927-44413962)
chr3 (1-36)||(46019492-46019527)
chr3 (1-44)||(47988492-47988534)
chr3 (1-44)||(47997779-47997821)
chr3 (1-44)||(48007066-48007108)
chr3 (1-56)||(48287681-48287736)
chr3 (1-56)||(48405420-48405475)
chr3 (1-56)||(48649590-48649644)
chr3 (1-36)||(49417605-49417640)
chr3 (1-56)||(51032631-51032685)
chr3 (2-56)||(34057960-34058014)
chr3 (1-34)||(288757-288790)
chr3 (1-38)||(8846519-8846556)
chr3 (3-36)||(13735158-13735191)
chr3 (4-37)||(23553786-23553819)
chr3 (3-56)||(45657778-45657831)
chr3 (3-36)||(47472358-47472391)
chr3 (3-56)||(47742294-47742347)
chr3 (3-56)||(48944719-48944771)
[»] scaffold0136 (1 HSPs)
scaffold0136 (2-56)||(38435-38489)
[»] chr2 (40 HSPs)
chr2 (3-56)||(6336262-6336315)
chr2 (2-56)||(45259292-45259346)
chr2 (3-56)||(19843494-19843547)
chr2 (1-50)||(38560694-38560743)
chr2 (1-45)||(42532745-42532789)
chr2 (1-56)||(5031933-5031988)
chr2 (1-56)||(6999074-6999129)
chr2 (1-44)||(14328403-14328446)
chr2 (1-56)||(18737880-18737935)
chr2 (1-56)||(31635817-31635871)
chr2 (2-44)||(26481097-26481139)
chr2 (3-56)||(13765410-13765463)
chr2 (3-56)||(16799682-16799735)
chr2 (1-45)||(2841855-2841899)
chr2 (2-50)||(6170646-6170694)
chr2 (1-45)||(29449232-29449276)
chr2 (1-45)||(36774559-36774603)
chr2 (1-45)||(38821387-38821431)
chr2 (5-56)||(2563714-2563765)
chr2 (1-56)||(6639479-6639533)
chr2 (1-56)||(9194439-9194494)
chr2 (1-36)||(9207619-9207654)
chr2 (1-56)||(11980661-11980715)
chr2 (1-56)||(14797657-14797711)
chr2 (1-36)||(14876987-14877022)
chr2 (1-36)||(18254216-18254251)
chr2 (1-56)||(23344996-23345050)
chr2 (1-36)||(28245758-28245793)
chr2 (1-56)||(30977899-30977954)
chr2 (1-56)||(33857227-33857281)
chr2 (15-53)||(12070862-12070900)
chr2 (2-56)||(12784406-12784460)
chr2 (1-31)||(22353182-22353212)
chr2 (7-36)||(2464261-2464290)
chr2 (3-56)||(7502436-7502489)
chr2 (3-56)||(14233727-14233780)
chr2 (1-38)||(17395082-17395119)
chr2 (1-38)||(41042281-41042318)
chr2 (1-38)||(43057092-43057129)
chr2 (1-54)||(44050027-44050080)
[»] chr7 (33 HSPs)
chr7 (1-53)||(40854661-40854713)
chr7 (1-45)||(42584823-42584867)
chr7 (1-56)||(1471297-1471352)
chr7 (1-56)||(47954108-47954163)
chr7 (1-45)||(34108861-34108905)
chr7 (1-45)||(41430158-41430202)
chr7 (1-56)||(6269376-6269431)
chr7 (1-44)||(44496809-44496852)
chr7 (1-56)||(46829489-46829544)
chr7 (1-38)||(21204357-21204394)
chr7 (1-45)||(12007192-12007236)
chr7 (1-45)||(31445338-31445382)
chr7 (4-56)||(35822984-35823036)
chr7 (1-45)||(38340389-38340433)
chr7 (1-45)||(47448847-47448891)
chr7 (4-56)||(48814817-48814869)
chr7 (1-56)||(9055277-9055331)
chr7 (17-56)||(9363397-9363436)
chr7 (1-36)||(13152622-13152657)
chr7 (1-56)||(13729736-13729791)
chr7 (1-56)||(21153060-21153114)
chr7 (1-36)||(30941415-30941450)
chr7 (1-56)||(33180716-33180771)
chr7 (1-56)||(35586779-35586834)
chr7 (1-56)||(37899333-37899388)
chr7 (1-36)||(41018693-41018728)
chr7 (1-56)||(41893925-41893980)
chr7 (1-36)||(44184565-44184600)
chr7 (1-31)||(31711943-31711973)
chr7 (1-31)||(41189550-41189580)
chr7 (3-36)||(27568047-27568080)
chr7 (3-44)||(33057401-33057442)
chr7 (4-45)||(43159584-43159625)
[»] chr6 (23 HSPs)
chr6 (1-56)||(1376374-1376429)
chr6 (1-56)||(1384122-1384177)
chr6 (1-50)||(18141307-18141356)
chr6 (1-56)||(20822874-20822929)
chr6 (1-56)||(34570601-34570656)
chr6 (3-44)||(5739772-5739813)
chr6 (1-56)||(2242028-2242083)
chr6 (1-56)||(8505780-8505835)
chr6 (1-36)||(8645338-8645373)
chr6 (1-56)||(11635541-11635596)
chr6 (1-56)||(14094921-14094975)
chr6 (5-56)||(15368833-15368884)
chr6 (1-56)||(16368053-16368108)
chr6 (1-56)||(24842378-24842433)
chr6 (1-56)||(25127839-25127894)
chr6 (1-36)||(25811845-25811880)
chr6 (1-56)||(32459523-32459578)
chr6 (1-36)||(34047416-34047451)
chr6 (1-55)||(13422979-13423033)
chr6 (2-56)||(17835622-17835675)
chr6 (3-45)||(33635909-33635951)
chr6 (19-56)||(5456874-5456911)
chr6 (3-36)||(31869096-31869129)
[»] chr1 (52 HSPs)
chr1 (1-56)||(30536001-30536056)
chr1 (1-56)||(49570006-49570061)
chr1 (1-56)||(49931563-49931618)
chr1 (2-56)||(52714908-52714962)
chr1 (3-55)||(21728243-21728294)
chr1 (1-56)||(10890052-10890107)
chr1 (1-56)||(12999829-12999883)
chr1 (1-56)||(13489672-13489727)
chr1 (1-56)||(15705068-15705123)
chr1 (1-56)||(21433407-21433462)
chr1 (1-56)||(33076129-33076184)
chr1 (1-56)||(51286373-51286428)
chr1 (1-56)||(52362492-52362547)
chr1 (3-56)||(29877307-29877360)
chr1 (7-56)||(49559211-49559260)
chr1 (1-45)||(649789-649833)
chr1 (1-45)||(9566967-9567011)
chr1 (3-55)||(30744997-30745049)
chr1 (3-55)||(30766448-30766500)
chr1 (1-45)||(48983674-48983718)
chr1 (1-44)||(740962-741005)
chr1 (1-44)||(1689413-1689456)
chr1 (1-36)||(8350203-8350238)
chr1 (5-56)||(11947805-11947856)
chr1 (1-56)||(16263435-16263490)
chr1 (1-56)||(18541058-18541112)
chr1 (1-36)||(27465064-27465099)
chr1 (1-56)||(27810254-27810308)
chr1 (1-36)||(32915078-32915113)
chr1 (1-56)||(33054094-33054149)
chr1 (1-36)||(34008210-34008245)
chr1 (1-56)||(34254357-34254412)
chr1 (1-56)||(35136854-35136909)
chr1 (1-36)||(35369729-35369764)
chr1 (1-36)||(37685360-37685395)
chr1 (1-36)||(37700123-37700158)
chr1 (1-56)||(44672037-44672091)
chr1 (1-36)||(47214238-47214273)
chr1 (1-36)||(48858853-48858888)
chr1 (1-56)||(49020410-49020465)
chr1 (1-56)||(51193138-51193192)
chr1 (2-56)||(44723370-44723424)
chr1 (1-34)||(3851189-3851222)
chr1 (1-34)||(4213104-4213137)
chr1 (1-42)||(21441660-21441700)
chr1 (3-36)||(24806230-24806263)
chr1 (3-56)||(30973562-30973615)
chr1 (1-34)||(37619575-37619608)
chr1 (1-34)||(47642613-47642646)
chr1 (1-50)||(47721425-47721474)
chr1 (1-50)||(47728417-47728466)
chr1 (3-56)||(51848890-51848942)
[»] scaffold0662 (1 HSPs)
scaffold0662 (1-56)||(1156-1211)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-56)||(6526-6581)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-56)||(16794-16849)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-56)||(55995-56050)
[»] scaffold0687 (1 HSPs)
scaffold0687 (2-56)||(1353-1407)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-45)||(101912-101956)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-36)||(10994-11029)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-56)||(8482-8537)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-36)||(10966-11001)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-56)||(15195-15249)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-56)||(366304-366358)
[»] scaffold0053 (1 HSPs)
scaffold0053 (3-45)||(12518-12560)


Alignment Details
Target: chr5 (Bit Score: 443; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 64 - 624
Target Start/End: Complemental strand, 884074 - 883523
Alignment:
Q  64 actactttgtaattatttaaatcttcaaaactttcctttatgaatatttaaatatattgtttccaccnnnnnnnn-gtatactgtttaaataattggatc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||     
T  884074 actactttgtaattatttaaatcttcaaaactttcctttatgaatatttaaatatattgtttccaccaaaaaaaaagtatactatttaaataattggatt 883975  T
Q  163 gtaagtggaacacacatataaagccatctttcatgggtagggatactcaacgaaattaaagggtgctagatagtggtcaccaccattattgtttccaaat 262  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  883974 gtaagtggaacacacatataaagccatctttcatgggtatggatactcaacgaaattaaagggtgctagatagtggtcaccaccattattgtttccaaat 883875  T
Q  263 caatagaaatattttctctagaaaagatagaagaaatggctgcagcagaaggagtgagtctgaaccatatagctcgagagtccaccgacgtaaaaagact 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  883874 caatagaaatattttctctagaaaagatagaagaaatggctgcagcagaaggagtgagtctgaaccatatagctcgagagtccaccgacgtaaaaagact 883775  T
Q  363 ctccaaattctaccaagaggttagttagcatttagcctatgaaactcagacactcatcttgtttgataccaacacagcacttacacatataatcacattg 462  Q
    |||||||||||||||||||||||||||||||||| ||||||||          ||||||||||||||||||| ||| |||| ||| || || ||||||||    
T  883774 ctccaaattctaccaagaggttagttagcatttaacctatgaa----------tcatcttgtttgataccaatacaacactgacaaatgtagtcacattg 883685  T
Q  463 aattatgtaactttttaaaattattatttgtatcgattgtctaatgttcgtgtatgtgttcctgcttcatatcacttgttgatttgaatgagttatcaga 562  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  883684 aattatgtaactttttaaaattattatttgtatcgattgtctaatgttcgtgtatgtgttcatgcttcatatcacttgttgatttgaacgagttatcaga 883585  T
Q  563 tgtttgggtttgaggaagttgagacccctgactttggagagttaaaggttatatggttgcgc 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  883584 tgtttgggtttgaggaagttgagacccctgactttggagagttaaagattatatggttgcgc 883523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 648 - 754
Target Start/End: Complemental strand, 883505 - 883399
Alignment:
Q  648 acttatccatctcatacaacgtagcaacggcgagctggctccatcatcctccattcctgttaaagacccctctcatatccgcttaggccatcatctctgc 747  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  883505 acttatccatctcatacaacatagcaacggcgagctggctccatcatcctccattcctgttaaagacccctctcatatccgcttaggccatcatctttgc 883406  T
Q  748 ttctcca 754  Q
    |||||||    
T  883405 ttctcca 883399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22098320 - 22098265
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  22098320 tgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 22098265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4088508 - 4088453
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||    
T  4088508 tgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatggatgtacaaat 4088453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18695383 - 18695328
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  18695383 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 18695328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 14321967 - 14322016
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  14321967 tatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 14322016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 16594385 - 16594437
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||| |||||    
T  16594385 gagtatgagaaagagagttgtcacaaaagttgttaaaaaatggatgttcaaat 16594437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6517777 - 6517722
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  6517777 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 6517722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8920143 - 8920088
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  8920143 tgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaat 8920088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19839992 - 19840047
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||| | ||||||||||| |||||    
T  19839992 tgtgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaat 19840047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35172339 - 35172382
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  35172339 tgtgagtatgagaaagaaagttgtcataaaagttgttataaaat 35172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6758797 - 6758841
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  6758797 tgtgagtataagagagaaagttgtcacaaaaattgttagaaaatg 6758841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 189709 - 189764
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||| | | |||||| |||| |||||    
T  189709 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaat 189764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 611929 - 611894
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  611929 tgtgagtatgagagagaaagttgtcacaaaagttgt 611894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 884506 - 884451
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | ||||||||||||||| || |||| | ||||||||||||||    
T  884506 tgtgagtatgagagataaagttgtcacaaaatttattaggagatgaatgtacaaat 884451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6446524 - 6446559
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6446524 tgtgagtatgagagagaaagttgtcacaaaagttgt 6446559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6940156 - 6940211
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| || ||| ||||||  |||||||||    
T  6940156 tgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaat 6940211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9168171 - 9168226
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | ||||| ||||||||||||||||||| |||||  |||||||||    
T  9168171 tgtgagtatgaaagagaaaattgtcacaaaagttgttaggaaatggttgtacaaat 9168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10649500 - 10649445
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||||||||||||||| | |||||| |||| |||||    
T  10649500 tgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 10649445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11148576 - 11148521
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||| ||||||||||||||||| | ||| ||| |||||||||    
T  11148576 tgtgagtatgagagagaatgttgtcacaaaagttgtcaaaaattgattgtacaaat 11148521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16690564 - 16690509
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | ||||||||||||||||||||||||  |||||  |||||||||    
T  16690564 tgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggttgtacaaat 16690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19481188 - 19481243
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||| | | |||||| |||| |||||    
T  19481188 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaat 19481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 20770196 - 20770161
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20770196 tgtgagtatgagagagaaagttgtcacaaaagttgt 20770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21922151 - 21922206
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||| ||||| | |||||| |||| |||||    
T  21922151 tgtgagtatgagagagaaagttgtcacaaacgttgtcacaaaatggatgttcaaat 21922206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27546128 - 27546073
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||| ||||||||||||||| |||| | ||||||| ||| |||||    
T  27546128 tgtgagtatgagaaataaagttgtcacaaaatttgtcataaaatgattgttcaaat 27546073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40364633 - 40364590
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||    
T  40364633 tgtgagtatgagagagaaagttgtcataaaagttgttataaaat 40364590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41321319 - 41321284
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41321319 tgtgagtatgagaaagaaagttgtcacaaaaattgt 41321284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42909783 - 42909729
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||  |||||||||    
T  42909783 tgtgagtatgagaaagaaagttgtca-aaaagttgtgagaaagtggttgtacaaat 42909729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43441803 - 43441748
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||  |||||||||||| |||||| |||| |||||    
T  43441803 tgtgagtatgagagagaaagttgttgcaaaagttgttacaaaatggatgttcaaat 43441748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37172761 - 37172791
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  37172761 tgtgagtatgagaaagaaagttgtcacaaaa 37172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 1293106 - 1293147
Alignment:
Q  15 agaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||| ||||||  |||||||||    
T  1293106 agaaagttgtcacaaaagttgttaaaaaatggttgtacaaat 1293147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3109595 - 3109648
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||| ||||||||||||||||| | ||| ||| |||||||||    
T  3109595 tgagtatgagagagaatgttgtcacaaaagttgtcacaaattgattgtacaaat 3109648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6046377 - 6046337
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaa 42  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  6046377 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaa 6046337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 14011368 - 14011327
Alignment:
Q  15 agaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||| ||||||| ||| |||||    
T  14011368 agaaagttgtcacaaaagttgttacaaaatgattgttcaaat 14011327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 29687136 - 29687091
Alignment:
Q  11 agaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||| |||| |||||||||||| | |||||||||    
T  29687136 agaaagaaagttgtcataaaaattgttagaaaattattgtacaaat 29687091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 31708432 - 31708380
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||  |||||||||    
T  31708432 tgagtatgagagagaaagttgtca-aaaagttgttataaaatggttgtacaaat 31708380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38493689 - 38493648
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaa 42  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  38493689 tgtgagtatgagagagaaagttatcacaaaagttattagaaa 38493648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41173317 - 41173268
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    ||||||||||||| |||||||||| ||||||||||| | |||||| ||||    
T  41173317 tgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggatgt 41173268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41175712 - 41175745
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  41175712 tgtgagtatgagagagaaagttgtcacaaaagtt 41175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43196631 - 43196680
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    |||||||||||||||||||||||| |||||| |||| | ||||| |||||    
T  43196631 tgtgagtatgagaaagaaagttgtaacaaaaattgtcacaaaataaatgt 43196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25830252 - 25830307
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  25830252 tgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 25830307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 13970982 - 13970929
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  13970982 tgagtatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaat 13970929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 67167 - 67222
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||| |||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  67167 tgtgggtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 67222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 42619989 - 42620038
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  42619989 tatgagagagaaatttgtcacaaaagttgttagaaaatggatgtacaaat 42620038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26026961 - 26026917
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  26026961 tgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatg 26026917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33100475 - 33100519
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  33100475 tgtgagtatgagagagaaagttgtcacaaaagttgttataaaatg 33100519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43285969 - 43286013
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  43285969 tgtgagtatgagagagaaagttgtcacaaaagttattagaaaatg 43286013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3946305 - 3946250
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  3946305 tgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaat 3946250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9550414 - 9550468
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| || ||||||    
T  9550414 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatgattggacaaat 9550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10644808 - 10644863
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  10644808 tgtgattatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 10644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29440528 - 29440583
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||||||||||||| | |  |||||||||| |||||    
T  29440528 tgtgagtatgagaaagaaagttgtcacaaaagttatcaccaaatgaatgttcaaat 29440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33451569 - 33451624
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||| ||| |||||    
T  33451569 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 33451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35067225 - 35067170
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||  |||||||||    
T  35067225 tgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaat 35067170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41600374 - 41600319
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| |  |||||||||| |||||    
T  41600374 tgtgagtatgagagagaaagttgtcacaaaagttgtcaataaatgaatgttcaaat 41600319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43715939 - 43715885
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||  |||||||||    
T  43715939 tgtgagtatgagagagaaagttgtcacaaaagtt-ttagaaaatggttgtacaaat 43715885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7603671 - 7603725
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||| |||||||||    
T  7603671 gtgagtatgaaaaagaaaattgtcacaaaagttgttataaattgattgtacaaat 7603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 6972214 - 6972165
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||| ||||||||||||||||||||||||  |||||| |||||||||    
T  6972214 tatgagatagaaagttgtcacaaaagttgttaagaaatgactgtacaaat 6972165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 14707356 - 14707405
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||| ||||||||||||| | ||||||||||| |||||    
T  14707356 tatgagaaagaaagttatcacaaaagttgtcaaaaaatgaatgttcaaat 14707405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16808645 - 16808602
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  16808645 tgtgagtatgagatagaaagttgtca-aaaagttgttagaaaatg 16808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 40719653 - 40719704
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||||||||||| ||| ||||||||||||||  |||||||||    
T  40719653 gagtatgagaaagaaagttgtca-aaaggttgttagaaaatggttgtacaaat 40719704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3270885 - 3270940
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||| ||| |||||||||||||||||||||| || |||||| |||||||||    
T  3270885 tgtgaatattagagagaaagttgtcacaaaagttgtaaggaaatgattgtacaaat 3270940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6440146 - 6440111
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6440146 tgtgagtatgagagagaaagttgtcacaaaagttgt 6440111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9549205 - 9549260
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| |||||||||||||||| | |||||| |||| |||||    
T  9549205 tgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaat 9549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13884167 - 13884221
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||| |||||||| | ||||||| |||||||||    
T  13884167 tgtgagtatgagagagaaagttgtcac-aaagttgtcaaaaaatgattgtacaaat 13884221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 24116100 - 24116050
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  24116100 agtatgagaaagaaagttgtca-aaaaattgttgcaaaatgaatgtacaaat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27325822 - 27325787
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  27325822 tgtgagtatgagagagaaagttgtcacaaaagttgt 27325787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34718180 - 34718125
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||| ||||||||||| | |||||| |||| |||||    
T  34718180 tgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaat 34718125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34970271 - 34970217
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||| |||| || |||||||||    
T  34970271 tgtgagtatgagagagaaagttgtca-aaaagttgttacaaaaggattgtacaaat 34970217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41159895 - 41159930
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41159895 tgtgagtatgagagagaaagttgtcacaaaagttgt 41159930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42786666 - 42786721
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| ||| ||||||||||||||||| |||| ||||||||  |||||||||    
T  42786666 tgtgagtataagagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaat 42786721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9431292 - 9431345
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaa 55  Q
    ||||||||||||| |||||||||||| |||| |||||||||| ||| ||||||||    
T  9431292 tgtgagtatgagagagaaagttgtca-aaaaattgttagaaattgattgtacaaa 9431345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 12707213 - 12707159
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| ||||||||||| |||||||||| | |||||| |||| |||||    
T  12707213 gtgagtatgagagagaaagttgtcgcaaaagttgtcataaaatggatgttcaaat 12707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 35792125 - 35792079
Alignment:
Q  10 gagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||| |||||||||||||||||||| ||| ||||||| |||||||||    
T  35792125 gagagagaaagttgtcacaaaagtttttaaaaaatgattgtacaaat 35792079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1796549 - 1796520
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  1796549 tgtgagtatgagaaagaaagttgtcacaaa 1796520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7271916 - 7271879
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  7271916 tgtgagtatgagagataaagttgtcacaaaagttgtta 7271879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12960002 - 12959962
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaa 42  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  12960002 tgtgagtatgagaaagaaagttgtca-aaaaattgttagaaa 12959962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18651435 - 18651398
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  18651435 tgtgagtatgagagagaaaattgtcacaaaagttgtta 18651398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38234072 - 38234039
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  38234072 tgtgagtatgagagagaaagttgtcacaaaagtt 38234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44061782 - 44061749
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  44061782 tgtgagtatgagagagaaagttgtcacaaaagtt 44061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3078914 - 3078969
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  3078914 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattgtacaaat 3078969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37514138 - 37514193
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  37514138 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggatgtacaaat 37514193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39881037 - 39881091
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  39881037 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatgattgtacaaat 39881091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44257736 - 44257791
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||    
T  44257736 tgtgagtatgagagagaaagttgtcacaaaaattgttagaaaatgattgcacaaat 44257791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42916715 - 42916671
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||    
T  42916715 tgtgagtatgagaaagaaagttgacacaaaagttgttataaaatg 42916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2268514 - 2268568
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||    
T  2268514 tgtgagtatgagagagaaagttgtcacaaaagttgtta-aaaatggatgttcaaat 2268568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32696795 - 32696850
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||  |||||||||    
T  32696795 tgtgagtatgagagagaaaattatcacaaaagttgttagaaaatggttgtacaaat 32696850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 36123470 - 36123521
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| |||||||||||| ||||||||||| ||||||| |||||||||    
T  36123470 agtatgagagagaaagttgtcataaaagttgttataaaatgattgtacaaat 36123521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38792896 - 38792950
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  38792896 tgtgagtatgagagagaaagttgtcataaaa-ttgttagaaaatgaatgtataaat 38792950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42815469 - 42815426
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  42815469 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaat 42815426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47015072 - 47015017
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| | |||||||||    
T  47015072 tgtgagtatgaaagagaaagttgtcacaaaagttgttaggaaataattgtacaaat 47015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 1562545 - 1562597
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  1562545 tgagtatgagagagaaagttgtca-aaaagttgttagaaaatggttgtacaaat 1562597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 48649580 - 48649539
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  48649580 gagtatgagagagaaaattgtcacaaaagttgttagaaaatg 48649539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13086087 - 13086039
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatg 49  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  13086087 tgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatgaatg 13086039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15522419 - 15522375
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||    
T  15522419 tgtgagtaggagagagaaagttatcacaaaagttgttagaaaatg 15522375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 32223992 - 32223952
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  32223992 agtatgagaaagaaagttatcacaaaagttgttataaaatg 32223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 47288144 - 47288092
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||| ||||||||||||||||| |||||| ||||||  |||||||||    
T  47288144 gagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaat 47288092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51255811 - 51255767
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  51255811 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 51255767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2401675 - 2401620
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | |||||||||||||||||||| | |||||| |||| |||||    
T  2401675 tgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaat 2401620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 5932770 - 5932805
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5932770 tgtgagtatgagagagaaagttgtcacaaaagttgt 5932805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10250522 - 10250557
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10250522 tgtgagtatgagagagaaagttgtcacaaaagttgt 10250557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12241122 - 12241080
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  12241122 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaat 12241080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16019541 - 16019486
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | | ||| |||||| ||||||||||||||||||| |||||||||    
T  16019541 tgtgagtatgaaagaaaaaattgtcataaaagttgttagaaaatgattgtacaaat 16019486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18882981 - 18883016
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18882981 tgtgagtatgagagagaaagttgtcacaaaagttgt 18883016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28458383 - 28458418
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28458383 tgtgagtatgagagagaaagttgtcacaaaagttgt 28458418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 30170026 - 30170061
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  30170026 tgtgagtatgagagagaaagttgtcacaaaagttgt 30170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33820343 - 33820385
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  33820343 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaat 33820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36512906 - 36512852
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||| |||||||||||    
T  36512906 tgtgagtatgagagagaaggttgtca-aaaagttgttataaaataaatgtacaaat 36512852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36812410 - 36812464
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||  |||||||||    
T  36812410 tgtgagtatgagagagaaagttgtc-caaaagttgttagaaattggttgtacaaat 36812464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 38338928 - 38338963
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  38338928 tgtgagtatgagagagaaagttgtcacaaaagttgt 38338963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38864742 - 38864797
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||| | ||||| | |||||||||    
T  38864742 tgtgagtatgagagagaaagttgtcaaaaaagttgtcacaaaataattgtacaaat 38864797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47519727 - 47519781
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||  |||||||||||| |||||| ||||||||||    
T  47519727 tgtgagtatgagagagaaagttgtt-caaaagttgttacaaaatggatgtacaaat 47519781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 50890080 - 50890115
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  50890080 tgtgagtatgagagagaaagttgtcacaaaagttgt 50890115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 55596013 - 55595959
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  55596013 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaattggttgtacaaat 55595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 55609172 - 55609207
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  55609172 tgtgagtatgagagagaaagttgtcacaaaagttgt 55609207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 55996486 - 55996432
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| |||||| |||| |||||||||||||| |||||||||    
T  55996486 tgtgagtatgagagagaaaattgtcaaaaaa-ttgttagaaaatgattgtacaaat 55996432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 39654879 - 39654829
Alignment:
Q  6 gtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||| |||||||||||||||||||||||||| | ||||| |||| ||||    
T  39654879 gtatgaaaaagaaagttgtcacaaaagttgttaaagaatgattgtataaat 39654829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 39478497 - 39478464
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  39478497 tgagtatgagagagaaagttgtcacaaaagttgt 39478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40609675 - 40609642
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  40609675 tgtgagtatgagagagaaagttgtcacaaaagtt 40609642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 43358675 - 43358623
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||  |||||||||    
T  43358675 tgagtatgagagagaaagttgtc-caaaagttgttagaaattggttgtacaaat 43358623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 51734642 - 51734675
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgtt 37  Q
    |||||||||| |||||||||||||||||||||||    
T  51734642 gagtatgagagagaaagttgtcacaaaagttgtt 51734675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29917030 - 29917085
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  29917030 tgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaat 29917085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29966183 - 29966238
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  29966183 tgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaat 29966238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37894249 - 37894304
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  37894249 tgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 37894304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49021776 - 49021721
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  49021776 tgtgagtatgagaaagaaagttgtcacaaaagttattaaaaaatggatgtacaaat 49021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 48353059 - 48353006
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  48353059 tgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaat 48353006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29573362 - 29573417
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  29573362 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 29573417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 19150331 - 19150380
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  19150331 tatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaat 19150380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27718792 - 27718837
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatga 46  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  27718792 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatga 27718837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 44963829 - 44963870
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatga 46  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  44963829 agtatgagagagaaagttgtcacaaaagttgttagaaaatga 44963870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 54099377 - 54099418
Alignment:
Q  15 agaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  54099377 agaaagttgtcacaaaagttgttagaaaatggatgtacaaat 54099418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26452729 - 26452773
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  26452729 tgtgagtatgagagagaaagttgtaacaaaagttgttagaaaatg 26452773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7221 - 7275
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||    
T  7221 tgtgagtatgagagagaaagttgtc-caaaagttgtcagaaaatgattgtacaaat 7275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14207264 - 14207307
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  14207264 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaat 14207307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14215012 - 14215055
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  14215012 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaat 14215055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26996381 - 26996326
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||| |||||    
T  26996381 tgtgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaat 26996326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45186558 - 45186613
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||  |||||||||    
T  45186558 tgtgagcatgagagagaaagttgtcacaaaaattgttagaaaatggttgtacaaat 45186613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 52714794 - 52714743
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  52714794 agtatgagagagaaagttatcacaaaaattgttagaaaatggatgtacaaat 52714743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 55400064 - 55400009
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  55400064 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 55400009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 31017402 - 31017455
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||    
T  31017402 gtgagtatgagagagaaaattgtca-aaaagttgttagaaaatgattgtacaaat 31017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 33796329 - 33796288
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  33796329 tgagtatgagagagaaagttgtcacaaaaattgttagaaaat 33796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44813454 - 44813504
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtaca 53  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||| ||||||    
T  44813454 tgtgagtatgagagaga--gttgtcacaaaagttgttagaaaatgattgtaca 44813504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10811200 - 10811156
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  10811200 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatg 10811156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31931028 - 31931080
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||| |||||    
T  31931028 gagtatgagagagaaaattgtcacaaaagttgttaaaaaatggatgttcaaat 31931080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45293035 - 45293071
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtt 37  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45293035 tgtgagtatgagagagaaagttgtcacaaaagttgtt 45293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5244293 - 5244258
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5244293 tgtgagtatgagagagaaagttgtcacaaaagttgt 5244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11335309 - 11335363
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  11335309 tgtgaatatgagagagaaagttgtca-aaaagttgttagaaaatggttgtacaaat 11335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 16479696 - 16479661
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  16479696 tgtgagtatgagagagaaagttgtcacaaaagttgt 16479661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17550204 - 17550161
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||    
T  17550204 tgtgagtatgagagagaaagttgtaacaaaagttgttaaaaaat 17550161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 26014876 - 26014841
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26014876 tgtgagtatgagagagaaagttgtcacaaaagttgt 26014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37927211 - 37927246
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37927211 tgtgagtatgagagagaaagttgtcacaaaagttgt 37927246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41505555 - 41505520
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41505555 tgtgagtatgagagagaaagttgtcacaaaagttgt 41505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44413927 - 44413962
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  44413927 tgtgagtatgagagagaaagttgtcacaaaagttgt 44413962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 46019527 - 46019492
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  46019527 tgtgagtatgagagagaaagttgtcacaaaagttgt 46019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47988492 - 47988534
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  47988492 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaat 47988534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47997779 - 47997821
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  47997779 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaat 47997821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48007066 - 48007108
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  48007066 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaat 48007108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48287736 - 48287681
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||| |||||||||||| || ||||||||||||||| ||||||  |||||||||    
T  48287736 tgtgagaatgagaaagaaaattatcacaaaagttgttataaaatggttgtacaaat 48287681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48405475 - 48405420
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||||  |||||||||    
T  48405475 tgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaat 48405420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48649644 - 48649590
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  48649644 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaagtggttgtacaaat 48649590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 49417640 - 49417605
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  49417640 tgtgagtatgagagagaaagttgtcacaaaagttgt 49417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51032631 - 51032685
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||  |||||||||    
T  51032631 tgtgagtatgagagagaaaattgtca-aaaagttgttagaaaatggttgtacaaat 51032685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 34057960 - 34058014
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| |||||||||||||||||||| | | |||||| |||| |||||    
T  34057960 gtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaat 34058014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 288790 - 288757
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  288790 tgtgagtatgagagagaaagttgtcacaaaagtt 288757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8846556 - 8846519
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  8846556 tgtgagtatgagagagaaaattgtcacaaaagttgtta 8846519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 13735191 - 13735158
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||||||||||||||||||| ||||    
T  13735191 tgagtatgagaaagaaagttgtcacaaaaattgt 13735158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 23553786 - 23553819
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgtt 37  Q
    |||||||||| |||||||||||||||||||||||    
T  23553786 gagtatgagagagaaagttgtcacaaaagttgtt 23553819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 45657778 - 45657831
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||| |||| |||| |||||||||||| |||||||||||||| |||| ||||    
T  45657778 tgagtaagagagagaacgttgtcacaaaaattgttagaaaatgattgtataaat 45657831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 47472391 - 47472358
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  47472391 tgagtatgagagagaaagttgtcacaaaagttgt 47472358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 47742347 - 47742294
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||  |||||||||    
T  47742347 tgagtatgagaaagaaagttatcataaaagttattaggaaatggttgtacaaat 47742294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 48944719 - 48944771
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||  |||||||||    
T  48944719 tgagtatgagagagaaaattgt-acaaaagttgttagaaaatggttgtacaaat 48944771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 38489 - 38435
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  38489 gtgagtatgagaaagaaagttgtcacaaaagttgtcataaaatgaatgttcaaat 38435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6336315 - 6336262
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  6336315 tgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 6336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 45259292 - 45259346
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||    
T  45259292 gtgagtatgagataaaaagttgtcacaaaaattgttagaaaatggatgtacaaat 45259346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 19843547 - 19843494
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  19843547 tgagtatgagagagaaagttgtcacaaaagttgttaggaaatagatgtacaaat 19843494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38560743 - 38560694
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  38560743 tgtgagtatgacaaagaaagttgtaacaaaagttgttacaaaatgaatgt 38560694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42532745 - 42532789
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  42532745 tgtgagtatgagaaagaaagttgtcacaaaagttattataaaatg 42532789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5031988 - 5031933
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||  |||||||||    
T  5031988 tgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaat 5031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6999074 - 6999129
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  6999074 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 6999129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14328446 - 14328403
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  14328446 tgtgagtatgagagaaaaagttgtcacaaaagttgttagaaaat 14328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18737880 - 18737935
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||| || |||||||    
T  18737880 tgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatggatatacaaat 18737935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31635817 - 31635871
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  31635817 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatggttgtacaaat 31635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26481097 - 26481139
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  26481097 gtgagtatgagaaagaaaattgtcacaaaagttgttaaaaaat 26481139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 13765463 - 13765410
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  13765463 tgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 13765410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 16799735 - 16799682
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||| |||||||| ||||||| ||||| ||||||||||    
T  16799735 tgagtatgagagagaaagttatcacaaaaattgttaggaaatggatgtacaaat 16799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2841899 - 2841855
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||    
T  2841899 tgtgagtatgagaaagaaagttgtaacaaaagttgtcacaaaatg 2841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 6170694 - 6170646
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||||    
T  6170694 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgt 6170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29449276 - 29449232
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  29449276 tgtgagtatgagagagaaagttgtcataaaagttgttataaaatg 29449232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36774603 - 36774559
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||    
T  36774603 tgtgaatatgagagagaaagttgtctcaaaagttgttagaaaatg 36774559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38821431 - 38821387
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||    
T  38821431 tgtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatg 38821387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 2563765 - 2563714
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  2563765 agtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 2563714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6639479 - 6639533
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||  |||||||||    
T  6639479 tgtgagtatgagagagaaagttgtta-aaaagttgttagaaaatggttgtacaaat 6639533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9194494 - 9194439
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||| | |||||| |||| |||||    
T  9194494 tgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaat 9194439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9207654 - 9207619
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9207654 tgtgagtatgagagagaaagttgtcacaaaagttgt 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11980715 - 11980661
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||  |||||||||    
T  11980715 tgtgagtatgagataaaaagttgtca-aaaagttgttagaaaatggttgtacaaat 11980661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14797657 - 14797711
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  14797657 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaattggttgtacaaat 14797711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14877022 - 14876987
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14877022 tgtgagtatgagagagaaagttgtcacaaaagttgt 14876987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18254216 - 18254251
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18254216 tgtgagtatgagagagaaagttgtcacaaaagttgt 18254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23344996 - 23345050
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||| ||||||| ||||||||||| |||||||||||||||||    
T  23344996 tgtgaatatgagagagaaggttgtca-aaaagttgttataaaatgaatgtacaaat 23345050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 28245793 - 28245758
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28245793 tgtgagtatgagagagaaagttgtcacaaaagttgt 28245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30977954 - 30977899
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||| | |||||| |||| |||||    
T  30977954 tgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaat 30977899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33857281 - 33857227
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| |||| ||||||||||| || |||||||||    
T  33857281 tgtgagtatgagagagaaagttgtca-aaaaattgttagaaaaagattgtacaaat 33857227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 12070900 - 12070862
Alignment:
Q  15 agaaagttgtcacaaaagttgttagaaaatgaatgtaca 53  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  12070900 agaaagttgtcacaaaaattgttagaaaatgattgtaca 12070862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 12784406 - 12784460
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| ||||||||||||||||| || ||| ||||||  |||||||||    
T  12784406 gtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaat 12784460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 22353182 - 22353212
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  22353182 tgtgagtatgagaaagaaagttgtcacaaaa 22353212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 2464261 - 2464290
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||||||||||||||||||||    
T  2464261 tatgagaaagaaagttgtcacaaaagttgt 2464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 7502436 - 7502489
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||  |||||||||    
T  7502436 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaat 7502489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14233727 - 14233780
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| ||||| |||||||||||||||| | |||||| |||| |||||    
T  14233727 tgagtatgagagagaaatttgtcacaaaagttgtcacaaaatggatgttcaaat 14233780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17395082 - 17395119
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  17395082 tgtgagtatgagaaataaagttgtcacaaaggttgtta 17395119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41042318 - 41042281
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41042318 tgtgagtatgagagaaaaagttgtcacaaaagttgtta 41042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43057129 - 43057092
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  43057129 tgtgagtataagagagaaagttgtcacaaaagttgtta 43057092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44050080 - 44050027
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaa 54  Q
    ||||||||||||| |||| ||||||||||||||||| | ||||||  |||||||    
T  44050080 tgtgagtatgagagagaaggttgtcacaaaagttgtcataaaatggttgtacaa 44050027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40854661 - 40854713
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtaca 53  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||    
T  40854661 tgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggatgtaca 40854713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42584867 - 42584823
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  42584867 tgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatg 42584823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1471297 - 1471352
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  1471297 tgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 1471352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47954108 - 47954163
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||    
T  47954108 tgtgagtatgaaagagaaagttgtcacaaaagttgttagaaaatgattgtgcaaat 47954163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34108861 - 34108905
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  34108861 tgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatg 34108905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41430158 - 41430202
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  41430158 tgtgagtataagagagaaagttgtcacaaaagttgttagaaaatg 41430202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6269431 - 6269376
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||  |||||||||    
T  6269431 tgtgagtatgagagagaaagttgtcacaaaaattgttataaaatggttgtacaaat 6269376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44496809 - 44496852
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  44496809 tgtgagtatgagagagaaagttgtcacaaaaattgttagaaaat 44496852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46829544 - 46829489
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||  |||||||||    
T  46829544 tgtgagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaat 46829489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21204394 - 21204357
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgtta 38  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21204394 tgtgagtatgagagagaaagttgtcacaaaagttgtta 21204357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12007192 - 12007236
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  12007192 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 12007236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31445382 - 31445338
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||    
T  31445382 tgtgagtatgaaaaagaaagttgtcacaaaagttgtcaaaaaatg 31445338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 35822984 - 35823036
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||| ||||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  35822984 gagtgtgagagagaaagttgtcataaaaattgttagaaaatggatgtacaaat 35823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38340389 - 38340433
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||    
T  38340389 tgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatg 38340433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47448891 - 47448847
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  47448891 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 47448847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 48814817 - 48814869
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||| |||  ||||||||||||||||||| ||||||||||| |||||    
T  48814817 gagtatgagagagagggttgtcacaaaagttgttaaaaaatgaatgttcaaat 48814869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9055331 - 9055277
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  9055331 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaattggttgtacaaat 9055277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 9363436 - 9363397
Alignment:
Q  17 aaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  9363436 aaagttgtcacaaaagttgttataaaatgattgtacaaat 9363397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13152657 - 13152622
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13152657 tgtgagtatgagagagaaagttgtcacaaaagttgt 13152622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13729791 - 13729736
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| |||| |||||    
T  13729791 tgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 13729736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21153114 - 21153060
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| ||||||||||||| |||| || ||||||||||| |||||||||    
T  21153114 tgtgagtatgaggaagaaagttgtca-aaaaattattagaaaatgattgtacaaat 21153060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30941450 - 30941415
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  30941450 tgtgagtatgagagagaaagttgtcacaaaagttgt 30941415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33180716 - 33180771
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| |||||| ||||||||| | ||||||||||| |||||    
T  33180716 tgtgagtatgagagagaaaattgtcataaaagttgtcacaaaatgaatgttcaaat 33180771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35586779 - 35586834
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||| | | |||||| |||| |||||    
T  35586779 tgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaat 35586834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37899388 - 37899333
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | |||||||||||||||||||| | |||||| |||| |||||    
T  37899388 tgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaat 37899333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41018728 - 41018693
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41018728 tgtgagtatgagatagaaagttgtcacaaaagttgt 41018693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41893980 - 41893925
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||||||||||||||| | |||||| |||| |||||    
T  41893980 tgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 41893925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44184565 - 44184600
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  44184565 tgtgagtatgagagagaaagttgtcacaaaagttgt 44184600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 31711943 - 31711973
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  31711943 tgtgagtatgagaaagaaagttgtcacaaaa 31711973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 41189550 - 41189580
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  41189550 tgtgagtatgagaaagaaagttgtcacaaaa 41189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 27568080 - 27568047
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||    
T  27568080 tgagtatgagaaataaagttgtcacaaaagttgt 27568047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 33057442 - 33057401
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    |||||| ||||||||||||||| ||||||||||||| |||||    
T  33057442 tgagtaagagaaagaaagttgttacaaaagttgttaaaaaat 33057401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 43159584 - 43159625
Alignment:
Q  4 gagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    |||||||||| ||||||||||||||||| |||||| ||||||    
T  43159584 gagtatgagatagaaagttgtcacaaaaattgttaaaaaatg 43159625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1376429 - 1376374
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||    
T  1376429 tgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 1376374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1384177 - 1384122
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||    
T  1384177 tgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 1384122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18141307 - 18141356
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  18141307 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgt 18141356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20822874 - 20822929
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  20822874 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 20822929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34570601 - 34570656
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||  |||||||||    
T  34570601 tgtgagtatgagagagaaagttgtcacaaaagttattacaaaatggttgtacaaat 34570656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 5739772 - 5739813
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  5739772 tgagtataagaaagaaagttgtcacaaaagttgttaaaaaat 5739813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2242028 - 2242083
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||| | ||||||| ||| |||||    
T  2242028 tgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaat 2242083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8505780 - 8505835
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||||| ||| |||||    
T  8505780 tgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 8505835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8645373 - 8645338
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8645373 tgtgagtatgagagagaaagttgtcacaaaagttgt 8645338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11635541 - 11635596
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||||| ||| |||||    
T  11635541 tgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 11635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14094975 - 14094921
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  14094975 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaattggctgtacaaat 14094921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 15368833 - 15368884
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| |||||||||| ||||||||||||| |||||| |||| |||||    
T  15368833 agtatgagagagaaagttgtaacaaaagttgttacaaaatggatgttcaaat 15368884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16368053 - 16368108
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||| |||||| || ||| ||||||  |||||||||    
T  16368053 tgtgagtatgagaaagaaagttgttacaaaaattattataaaatggttgtacaaat 16368108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24842433 - 24842378
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||| ||||||||||||||| |  |||||||||| |||||    
T  24842433 tgtgagtatgagagagaaagctgtcacaaaagttgtcattaaatgaatgttcaaat 24842378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25127839 - 25127894
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| ||| |||||||| ||||||||||||||| ||||||  |||||||||    
T  25127839 tgtgagtatcagagagaaagttttcacaaaagttgttacaaaatggttgtacaaat 25127894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 25811845 - 25811880
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  25811845 tgtgagtatgagagagaaagttgtcacaaaagttgt 25811880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32459523 - 32459578
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  32459523 tgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 32459578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34047451 - 34047416
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  34047451 tgtgagtatgagagagaaagttgtcacaaaagttgt 34047416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13423033 - 13422979
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaa 55  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||||| |||| ||||    
T  13423033 tgtgagtatgagagagaaagttgtcacaaaaattgttatgaaatggatgttcaaa 13422979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 17835675 - 17835622
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||| |||||||||||| |||||||||||||||| |  |||||||||    
T  17835675 gtgagtatgagagagaaagttgtca-aaaagttgttagaaaagggttgtacaaat 17835622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 33635909 - 33635951
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||    
T  33635909 tgagtatgagagagaaaattgtcacaaaagttgttaaaaaatg 33635951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 5456874 - 5456911
Alignment:
Q  19 agttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  5456874 agttgtcacaaaagttgttaaaaaatgaatgttcaaat 5456911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 31869129 - 31869096
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  31869129 tgagtatgagagagaaagttgtcacaaaagttgt 31869096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30536056 - 30536001
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||    
T  30536056 tgtgagtatgagagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaat 30536001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49570061 - 49570006
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  49570061 tgtgaatatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaat 49570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49931618 - 49931563
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  49931618 tgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaat 49931563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 52714908 - 52714962
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||| |||||    
T  52714908 gtgagtatgagaaagaaaattgtcacaaaagttgttataaaatggatgttcaaat 52714962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 21728243 - 21728294
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaa 55  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  21728243 tgagtatgagagagaaagttgtca-aaaagttgttagaaaatgattgtacaaa 21728294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10890052 - 10890107
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  10890052 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 10890107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12999829 - 12999883
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||  |||||||||    
T  12999829 tgtgagtatgagagagaaagttgt-acaaaagttgttagaaaatggttgtacaaat 12999883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13489727 - 13489672
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  13489727 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 13489672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15705068 - 15705123
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  15705068 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 15705123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21433407 - 21433462
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||  |||||||||    
T  21433407 tgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 21433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33076184 - 33076129
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||  |||||||||    
T  33076184 tgtgagtatgatagagaaagttgtcataaaagttgttagaaaatggttgtacaaat 33076129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51286373 - 51286428
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||||    
T  51286373 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaat 51286428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52362547 - 52362492
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||    
T  52362547 tgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaat 52362492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 29877360 - 29877307
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| |||||||||||| || |||||||||||||||  |||||||||    
T  29877360 tgagtatgagagagaaagttgtcataagagttgttagaaaatggttgtacaaat 29877307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 49559211 - 49559260
Alignment:
Q  7 tatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||| ||||||||||||||||||||||||| ||||| || |||||||    
T  49559211 tatgagagagaaagttgtcacaaaagttgttaggaaatggatatacaaat 49559260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 649833 - 649789
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  649833 tgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatg 649789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9566967 - 9567011
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  9566967 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 9567011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30745049 - 30744997
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaa 55  Q
    ||||||||| | |||||||||||||||||||| ||||||||||  ||||||||    
T  30745049 tgagtatgatagagaaagttgtcacaaaagttattagaaaatggttgtacaaa 30744997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30766500 - 30766448
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaa 55  Q
    ||||||||| | |||||||||||||||||||| ||||||||||  ||||||||    
T  30766500 tgagtatgatagagaaagttgtcacaaaagttattagaaaatggttgtacaaa 30766448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48983674 - 48983718
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  48983674 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 48983718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 740962 - 741005
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  740962 tgtgagtatgagagagaaaaatgtcacaaaagttgttagaaaat 741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1689456 - 1689413
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaat 44  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||    
T  1689456 tgtgagtatgagagagaaagttgtcacaaaaattgttataaaat 1689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 8350203 - 8350238
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8350203 tgtgagtatgagagagaaagttgtcacaaaagttgt 8350238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 11947856 - 11947805
Alignment:
Q  5 agtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| |||||||||||||||||||||| | ||||||  |||||||||    
T  11947856 agtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaat 11947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16263490 - 16263435
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||||| ||| |||||| ||||||||||||||||| | |||||||||    
T  16263490 tgtgaatatgagaaaaaaaattgtcataaaagttgttagaaaataattgtacaaat 16263435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18541058 - 18541112
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  18541058 tgtgaatatgagagagaaagttgtca-aaaagttgttagaaaatggttgtacaaat 18541112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 27465064 - 27465099
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  27465064 tgtgagtatgagagagaaagttgtcacaaaagttgt 27465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27810254 - 27810308
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  27810254 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaattggttgtacaaat 27810308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32915078 - 32915113
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32915078 tgtgagtatgagagagaaagttgtcacaaaagttgt 32915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33054094 - 33054149
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||  |||||||||| | ||||||||||| |||||    
T  33054094 tgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatgaatgttcaaat 33054149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34008245 - 34008210
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  34008245 tgtgagtatgagatagaaagttgtcacaaaagttgt 34008210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34254357 - 34254412
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | |||||||||||| ||||||| | ||||||||||| |||||    
T  34254357 tgtgagtatgagagataaagttgtcacagaagttgtcataaaatgaatgttcaaat 34254412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35136909 - 35136854
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| |||| |||||    
T  35136909 tgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 35136854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35369764 - 35369729
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35369764 tgtgagtatgagatagaaagttgtcacaaaagttgt 35369729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 37685395 - 37685360
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37685395 tgtgagtatgagagagaaagttgtcacaaaagttgt 37685360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37700123 - 37700158
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37700123 tgtgagtatgagagagaaagttgtcacaaaagttgt 37700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44672037 - 44672091
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||| |||||| ||||||||||| ||||||| |||||||||    
T  44672037 tgtgagtatgagagagaaaattgtca-aaaagttgttaaaaaatgattgtacaaat 44672091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 47214273 - 47214238
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  47214273 tgtgagtatgagagagaaagttgtcacaaaagttgt 47214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 48858888 - 48858853
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48858888 tgtgagtatgagagagaaagttgtcacaaaagttgt 48858853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49020410 - 49020465
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | ||| |||||||||||||||||| ||||||  |||||||||    
T  49020410 tgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaat 49020465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51193138 - 51193192
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| ||||||||||| ||||| |||||| |||||| ||||||||||    
T  51193138 tgtgagtatgagagagaaagttgtc-caaaaattgttataaaatggatgtacaaat 51193192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 44723424 - 44723370
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||| ||||||| ||||||||||||||||| || ||| ||||| |||||||||||    
T  44723424 gtgaatatgagagagaaagttgtcacaaaaattattataaaataaatgtacaaat 44723370  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3851222 - 3851189
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  3851222 tgtgagtatgagagagaaagttgtcacaaaagtt 3851189  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4213137 - 4213104
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  4213137 tgtgagtatgagagagaaagttgtcacaaaagtt 4213104  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21441700 - 21441660
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaa 42  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  21441700 tgtgagtatgagagagaaagttgtca-aaaagttgttagaaa 21441660  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 24806230 - 24806263
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||| ||||||||||||||||||||||    
T  24806230 tgagtatgagagagaaagttgtcacaaaagttgt 24806263  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30973615 - 30973562
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||| | ||||||||||||||||| ||||||||||| |  |||||||||    
T  30973615 tgagtatgaaagagaaagttgtcacaaaaattgttagaaaagggttgtacaaat 30973562  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37619608 - 37619575
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  37619608 tgtgagtatgagagagaaagttgtcacaaaagtt 37619575  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47642613 - 47642646
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagtt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  47642613 tgtgagtatgagagagaaagttgtcacaaaagtt 47642646  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47721474 - 47721425
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||| |||||    
T  47721474 tgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaataaatgt 47721425  T

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Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47728466 - 47728417
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgt 50  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||| |||||    
T  47728466 tgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaataaatgt 47728417  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 51848942 - 51848890
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | |||||||||| ||||||||||||||||||  |||||||||    
T  51848942 tgagtatgagatataaagttgtca-aaaagttgttagaaaatggttgtacaaat 51848890  T

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Target: scaffold0662 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1211 - 1156
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||| | ||||||||||||||||||||||||| |||| | |||||||||    
T  1211 tgtgagtatgaaagagaaagttgtcacaaaagttgttaggaaataattgtacaaat 1156  T

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Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6526 - 6581
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||| ||| |||||    
T  6526 tgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaat 6581  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16794 - 16849
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||| ||| |||||    
T  16794 tgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgttcaaat 16849  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 56050 - 55995
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||| ||| |||||    
T  56050 tgtgagtatgagagagaaagttgtcacaaatgttgttaaaaaatgattgttcaaat 55995  T

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Target: scaffold0687 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 1353 - 1407
Alignment:
Q  2 gtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||| |||||||||    
T  1353 gtgagtatgaaaaagaaaattgtcacaaaagttgttataaattgattgtacaaat 1407  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 101912 - 101956
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||    
T  101912 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatg 101956  T

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Target: scaffold0532 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11029 - 10994
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11029 tgtgagtatgagagagaaagttgtcacaaaagttgt 10994  T

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Target: scaffold0201 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8537 - 8482
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||||||||||| |||||||||||| |||| |||||| ||||||| ||| |||||    
T  8537 tgtgagtatgagagagaaagttgtcataaaaattgttaaaaaatgattgttcaaat 8482  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11001 - 10966
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgt 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11001 tgtgagtatgagagagaaagttgtcacaaaagttgt 10966  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15195 - 15249
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    |||||||||||||||||||||||| || |||||||||| ||| ||| |||||||||    
T  15195 tgtgagtatgagaaagaaagttgttac-aaagttgttaaaaagtgattgtacaaat 15249  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 366358 - 366304
Alignment:
Q  1 tgtgagtatgagaaagaaagttgtcacaaaagttgttagaaaatgaatgtacaaat 56  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  366358 tgtgaatatgagagagaaagttgtcacaaaagttgtta-aaaatggttgtacaaat 366304  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 12560 - 12518
Alignment:
Q  3 tgagtatgagaaagaaagttgtcacaaaagttgttagaaaatg 45  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||    
T  12560 tgagtataagagagaaagttgtcacaaaaattgttagaaaatg 12518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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