View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11980_low_121 (Length: 209)

Name: NF11980_low_121
Description: NF11980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11980_low_121
NF11980_low_121
[»] chr1 (21 HSPs)
chr1 (1-207)||(22679494-22679697)
chr1 (121-201)||(14760047-14760127)
chr1 (110-209)||(16706501-16706603)
chr1 (124-202)||(13765561-13765639)
chr1 (121-203)||(30746775-30746857)
chr1 (121-203)||(30768226-30768308)
chr1 (144-209)||(16706360-16706425)
chr1 (118-203)||(20171388-20171472)
chr1 (121-209)||(35294335-35294423)
chr1 (121-202)||(30748953-30749034)
chr1 (121-202)||(30770404-30770485)
chr1 (114-209)||(30749106-30749201)
chr1 (114-209)||(30770557-30770652)
chr1 (122-199)||(15393331-15393407)
chr1 (114-196)||(30746940-30747021)
chr1 (114-196)||(30768391-30768472)
chr1 (152-197)||(8819369-8819414)
chr1 (122-191)||(23485856-23485925)
chr1 (145-201)||(15393171-15393227)
chr1 (144-179)||(14759977-14760012)
chr1 (172-209)||(51942034-51942071)
[»] chr2 (33 HSPs)
chr2 (121-209)||(18509499-18509587)
chr2 (121-201)||(980921-981000)
chr2 (117-209)||(16127916-16128008)
chr2 (121-208)||(37897577-37897664)
chr2 (121-208)||(16192579-16192667)
chr2 (145-208)||(12874847-12874910)
chr2 (122-209)||(27847860-27847947)
chr2 (116-199)||(39786313-39786396)
chr2 (142-208)||(27847999-27848065)
chr2 (144-209)||(981083-981147)
chr2 (121-209)||(20972388-20972476)
chr2 (116-209)||(43130309-43130401)
chr2 (144-208)||(35926749-35926813)
chr2 (121-208)||(12874682-12874769)
chr2 (113-189)||(18560492-18560566)
chr2 (144-209)||(35926890-35926955)
chr2 (120-209)||(40152700-40152788)
chr2 (121-209)||(7328464-7328551)
chr2 (145-209)||(32945638-32945702)
chr2 (123-198)||(16126397-16126471)
chr2 (117-207)||(16126218-16126308)
chr2 (123-185)||(17368860-17368922)
chr2 (121-195)||(25330562-25330636)
chr2 (123-198)||(16128095-16128169)
chr2 (123-198)||(16333154-16333228)
chr2 (144-209)||(7328357-7328423)
chr2 (117-167)||(16333357-16333407)
chr2 (129-171)||(30714132-30714174)
chr2 (122-196)||(39751660-39751732)
chr2 (144-204)||(4921194-4921254)
chr2 (144-208)||(4921330-4921394)
chr2 (144-184)||(26859208-26859247)
chr2 (144-200)||(37897727-37897783)
[»] chr4 (16 HSPs)
chr4 (114-208)||(28687456-28687550)
chr4 (121-209)||(54164632-54164720)
chr4 (120-209)||(53343706-53343794)
chr4 (140-209)||(32186633-32186702)
chr4 (144-196)||(17430738-17430790)
chr4 (143-209)||(28687627-28687693)
chr4 (121-198)||(33752710-33752787)
chr4 (118-209)||(32185280-32185369)
chr4 (144-208)||(17431127-17431191)
chr4 (144-208)||(34665005-34665069)
chr4 (143-205)||(34665148-34665210)
chr4 (121-209)||(13552828-13552916)
chr4 (144-209)||(54164491-54164556)
chr4 (124-201)||(17615602-17615679)
chr4 (144-209)||(55173069-55173134)
chr4 (116-208)||(30941490-30941581)
[»] chr5 (21 HSPs)
chr5 (121-209)||(25905960-25906048)
chr5 (117-209)||(22297928-22298020)
chr5 (119-209)||(22297762-22297852)
chr5 (146-209)||(24490720-24490783)
chr5 (116-207)||(25906125-25906216)
chr5 (121-208)||(29673293-29673379)
chr5 (121-208)||(17048022-17048108)
chr5 (143-209)||(6843106-6843172)
chr5 (122-208)||(13657552-13657638)
chr5 (122-208)||(29673705-29673791)
chr5 (144-196)||(12272527-12272579)
chr5 (121-208)||(38298696-38298783)
chr5 (121-209)||(2344630-2344718)
chr5 (144-208)||(15773734-15773798)
chr5 (121-170)||(2846575-2846624)
chr5 (121-170)||(2858412-2858461)
chr5 (141-202)||(38299117-38299178)
chr5 (118-202)||(20510337-20510420)
chr5 (121-208)||(13657716-13657803)
chr5 (144-209)||(17047880-17047945)
chr5 (116-196)||(5161081-5161160)
[»] chr3 (20 HSPs)
chr3 (113-209)||(2928088-2928184)
chr3 (121-209)||(30430272-30430360)
chr3 (121-197)||(4304325-4304401)
chr3 (116-209)||(4304140-4304233)
chr3 (121-198)||(30172073-30172150)
chr3 (121-209)||(6931106-6931194)
chr3 (121-208)||(28725678-28725767)
chr3 (121-184)||(25799513-25799575)
chr3 (126-208)||(44094309-44094391)
chr3 (139-209)||(45405066-45405136)
chr3 (148-209)||(45404826-45404887)
chr3 (121-208)||(8896034-8896121)
chr3 (122-208)||(41993143-41993229)
chr3 (121-195)||(43907899-43907972)
chr3 (144-209)||(30173618-30173683)
chr3 (144-209)||(32618952-32619017)
chr3 (144-209)||(34502627-34502692)
chr3 (144-209)||(44094176-44094242)
chr3 (144-209)||(4475269-4475334)
chr3 (144-189)||(27614039-27614084)
[»] chr6 (17 HSPs)
chr6 (118-209)||(13340442-13340533)
chr6 (121-209)||(31298726-31298814)
chr6 (139-208)||(13340610-13340679)
chr6 (121-207)||(31298892-31298978)
chr6 (144-209)||(30519705-30519770)
chr6 (116-209)||(34637590-34637683)
chr6 (116-199)||(6190566-6190648)
chr6 (121-202)||(12289982-12290063)
chr6 (144-209)||(24704332-24704397)
chr6 (116-208)||(12290136-12290227)
chr6 (146-206)||(14365097-14365157)
chr6 (121-208)||(34637427-34637513)
chr6 (128-206)||(10284371-10284449)
chr6 (147-194)||(19045071-19045118)
chr6 (124-209)||(24704748-24704831)
chr6 (144-201)||(7359593-7359650)
chr6 (144-204)||(33599847-33599907)
[»] chr8 (24 HSPs)
chr8 (121-209)||(33892202-33892290)
chr8 (121-208)||(31212315-31212402)
chr8 (121-209)||(9861570-9861658)
chr8 (145-208)||(36874336-36874399)
chr8 (121-209)||(31212450-31212538)
chr8 (116-208)||(33892033-33892125)
chr8 (118-208)||(6906440-6906530)
chr8 (116-209)||(15229613-15229706)
chr8 (121-209)||(6906266-6906353)
chr8 (121-189)||(20691276-20691343)
chr8 (121-209)||(27503656-27503744)
chr8 (149-208)||(29242461-29242520)
chr8 (121-208)||(29242839-29242925)
chr8 (144-202)||(37037276-37037334)
chr8 (144-209)||(8791735-8791800)
chr8 (114-195)||(14148391-14148472)
chr8 (121-209)||(10069853-10069941)
chr8 (121-208)||(39484723-39484809)
chr8 (116-206)||(5879872-5879961)
chr8 (122-200)||(14148860-14148937)
chr8 (144-209)||(10070025-10070090)
chr8 (138-200)||(7766359-7766421)
chr8 (116-205)||(8791877-8791966)
chr8 (144-208)||(5880030-5880094)
[»] chr7 (21 HSPs)
chr7 (121-209)||(20164621-20164709)
chr7 (121-209)||(29635237-29635324)
chr7 (122-208)||(31172342-31172428)
chr7 (144-205)||(20165011-20165072)
chr7 (121-209)||(12821181-12821269)
chr7 (144-208)||(23797211-23797275)
chr7 (121-209)||(37081260-37081347)
chr7 (116-203)||(3555362-3555448)
chr7 (113-208)||(7760764-7760859)
chr7 (114-209)||(19105420-19105515)
chr7 (121-205)||(19105258-19105341)
chr7 (144-209)||(31198323-31198388)
chr7 (121-209)||(31198464-31198551)
chr7 (121-209)||(7760610-7760698)
chr7 (116-209)||(6036545-6036638)
chr7 (139-200)||(15329877-15329939)
chr7 (119-209)||(21657465-21657555)
chr7 (121-209)||(8129881-8129968)
chr7 (121-209)||(9686451-9686539)
chr7 (147-195)||(18881142-18881190)
chr7 (121-196)||(47741036-47741111)
[»] scaffold0328 (1 HSPs)
scaffold0328 (143-204)||(11623-11684)
[»] scaffold0129 (1 HSPs)
scaffold0129 (142-202)||(6294-6354)
[»] scaffold0007 (1 HSPs)
scaffold0007 (144-209)||(175527-175592)
[»] scaffold0042 (1 HSPs)
scaffold0042 (121-200)||(30313-30392)
[»] scaffold0025 (1 HSPs)
scaffold0025 (144-209)||(63991-64056)


Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22679697 - 22679494
Alignment:
Q  1 gatgtataaattgcatcttgtgtttatgtttatgccatataataagaaatgttgaaataaccttgcaatgactatgagtcatttaacagaaataatagga 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |    
T  22679697 gatgtataaattgcatcttgtgtgtatgtttatgc-atataataagaaatgttgaaataaccttgcaatgact--gagtcatttaacataaataatagca 22679601  T
Q  101 acccacgtatagaaattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtcc 200  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  22679600 acccacgtatagaaattagagttaaataagtaaacgatccccctaaatataccaacatttgattttagtccctctaaaatatttgttaggtttttggtcc 22679501  T
Q  201 ctctaaa 207  Q
    |||||||    
T  22679500 ctctaaa 22679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 14760127 - 14760047
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccc 201  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||||  ||||| ||||||||||    
T  14760127 gttaaataagtaaatgatccccttaaatataccaacatttgattttaatccccctaaaatattttttaggcttttggtccc 14760047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 16706603 - 16706501
Alignment:
Q  110 tagaaattagagttaaataagtaaatgacccccttaaatatacca---acatttgattttagtctctctaaaatattccttaggtttttggtccctctaa 206  Q
    |||||| ||| |||||||| ||||||   |||| |||||||||||   |||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  16706603 tagaaagtagggttaaatatgtaaatagtccccctaaatataccaccaacatttgattttagtccccctaaaatattctttaggtttttggtccctctaa 16706504  T
Q  207 aat 209  Q
    |||    
T  16706503 aat 16706501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 13765561 - 13765639
Alignment:
Q  124 aaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    |||||||||||| | | || ||||||||||||||||||||||||||| |  |||||||||| |||||||||||||||||    
T  13765561 aaataagtaaataatctccctaaatataccaacatttgattttagtccccataaaatattctttaggtttttggtccct 13765639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 30746775 - 30746857
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctc 203  Q
    ||||||||||||||||  |||||||||||||| || ||||||||||||| ||  |||||||||| |||||||||| |||||||    
T  30746775 gttaaataagtaaatggtccccttaaatatactaatatttgattttagtttccttaaaatattctttaggttttttgtccctc 30746857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 30768226 - 30768308
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctc 203  Q
    ||||||||||||||||  |||||||||||||| || ||||||||||||| ||  |||||||||| |||||||||| |||||||    
T  30768226 gttaaataagtaaatggtccccttaaatatactaatatttgattttagtttccttaaaatattctttaggttttttgtccctc 30768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16706360 - 16706425
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||| ||||||||    
T  16706360 taaatataccaacatttgattttagtccctctaaaattttctttaggcttttggtccttctaaaat 16706425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 20171388 - 20171472
Alignment:
Q  118 agagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctc 203  Q
    |||||| ||||||||||||  | |||||| ||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||    
T  20171388 agagttgaataagtaaatggtctccttaa-tataccaacatttgattttagtccctctaaaatatttcttagacttttggtccctc 20171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 35294335 - 35294423
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||  || |||||||| || ||| |||||||||||| |||||    
T  35294335 gttaaataattaaatgatccctttaaatatatcaacatttgattttagtccatcgaaaatatttctgaggcttttggtccctccaaaat 35294423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 30748953 - 30749034
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    ||||||||||||||||  || | ||||||||| || |||||||||||||| | ||||||||||| ||||| |||||||||||    
T  30748953 gttaaataagtaaatggtcctcctaaatatacaaatatttgattttagtccccctaaaatattctttaggcttttggtccct 30749034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 30770404 - 30770485
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    ||||||||||||||||  || | ||||||||| || |||||||||||||| | ||||||||||| ||||| |||||||||||    
T  30770404 gttaaataagtaaatggtcctcctaaatatacaaatatttgattttagtccccctaaaatattctttaggcttttggtccct 30770485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 30749201 - 30749106
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||| |||||||| |||||| | || | |||||||| ||||||||||||||| |  ||||||||||||  ||| ||||||||| ||||||||||    
T  30749201 aattagggttaaatacgtaaataatcctcctaaatatatcaacatttgattttaattcctctaaaatattttttatgtttttggttcctctaaaat 30749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 30770652 - 30770557
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||| |||||||| |||||| | || | |||||||| ||||||||||||||| |  ||||||||||||  ||| ||||||||| ||||||||||    
T  30770652 aattagggttaaatacgtaaataatcctcctaaatatatcaacatttgattttaattcctctaaaatattttttatgtttttggttcctctaaaat 30770557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 15393407 - 15393331
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtc 199  Q
    |||||||||||||||  ||||  ||||||||||||||||||||| |||| | ||||||||||  ||||||||||||||    
T  15393407 ttaaataagtaaatggtcccccgaaatataccaacatttgatttcagtccccctaaaatatt-tttaggtttttggtc 15393331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 30747021 - 30746940
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    |||||| ||||||||||||||| | |  | ||||||||||||||||| ||||||||| ||  |||||||||||||| ||||||    
T  30747021 aattagggttaaataagtaaataatcatc-taaatataccaacatttcattttagtcccttcaaaatattccttagatttttg 30746940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 30768472 - 30768391
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    |||||| ||||||||||||||| | |  | ||||||||||||||||| ||||||||| ||  |||||||||||||| ||||||    
T  30768472 aattagggttaaataagtaaataatcatc-taaatataccaacatttcattttagtcccttcaaaatattccttagatttttg 30768391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 8819414 - 8819369
Alignment:
Q  152 ccaacatttgattttagtctctctaaaatattccttaggtttttgg 197  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||    
T  8819414 ccaacatttgattttagtatccataaaatattccttaggtttttgg 8819369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 23485925 - 23485856
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggt 191  Q
    |||||||||||||||| || | |||| ||||||| ||||||||||| |  ||||||||||||| ||||||    
T  23485925 ttaaataagtaaatgatcctcctaaacataccaaaatttgattttaattcctctaaaatattctttaggt 23485856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 15393171 - 15393227
Alignment:
Q  145 aaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccc 201  Q
    ||||||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||    
T  15393171 aaatataccaatatttaattttcgtccccctaaaatattccttaggcttttggtccc 15393227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 14759977 - 14760012
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaa 179  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14759977 taaatataccaacatttgattttagtccctctaaaa 14760012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 51942071 - 51942034
Alignment:
Q  172 ctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  51942071 ctctaaaatatttcttaggtttttggttcctctaaaat 51942034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 18509499 - 18509587
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  18509499 gttaaataattaaatggtccccctaaatataccaacatttgattttagtccctctaaaatattcctttggtttttggtccctccaaaat 18509587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 980921 - 981000
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccc 201  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  980921 gttaaataagtaaatgatccctttaaatatatcaacatttgattttagtc-ctctaaaatatttcttaggcttttggtccc 981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 16127916 - 16128008
Alignment:
Q  117 tagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||   |||||||||||||||||||||| |||||||||   ||||||||||   |||||||||||||||||||||||    
T  16127916 tagagttaaataagtaaatagtccccttaaatataccaacatttaattttagtcctcctaaaatattatgtaggtttttggtccctctaaaat 16128008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 37897577 - 37897664
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||| ||||  ||| | |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  37897577 gttaaataaggaaatagccctcctaaatagaccaacatttgattttactccctctaaaatattccttaggttttcggtccctctaaaa 37897664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 16192667 - 16192579
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttagg-tttttggtccctctaaaa 208  Q
    |||||||||||||||   || |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  16192667 gttaaataagtaaatagtcctcttaaatatatcaacatttgattttagtctccctaaaatattccttaggctttttggtctctccaaaa 16192579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 12874910 - 12874847
Alignment:
Q  145 aaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  12874910 aaatataccaatatttgattttagtccctctaaaatattatttaggtttttggtccctctaaaa 12874847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 27847860 - 27847947
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||   |||| |||||||||||||||||||||||||||    |||||||||||||| ||||||||||||| ||||||    
T  27847860 ttaaataagtaaatagtccccataaatataccaacatttgattttagtccacttaaaatattccttaagtttttggtccctttaaaat 27847947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 39786313 - 39786396
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtc 199  Q
    |||| ||||||||||||||| | ||  |||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||    
T  39786313 ttagggttaaataagtaaataatcctattaaatataccaacatttgattttagtctcgctaaaattttccttagacttttggtc 39786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 27848065 - 27847999
Alignment:
Q  142 cttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||| ||||    
T  27848065 cttaaatataccaacatttgattttagtctctttaaaatattacttaagcttttggtccctccaaaa 27847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 981147 - 981083
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||    
T  981147 taaatataccaacatttgattttagtccc-ctaaaatattctttaggcttttggtccctctaaaat 981083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 20972476 - 20972388
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||| ||||  ||| ||||||||| |||||||||||||||||| |   |||||||| ||||||||||||||||| |||||||    
T  20972476 gttaaataagtgaatggtccctttaaatatatcaacatttgattttagtccccaaaaaatatttcttaggtttttggtcccgctaaaat 20972388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 43130401 - 43130309
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| ||||||||||||||||  | || ||||||||||| |||||||||| |||| ||| ||||| ||||||||| |||||||||||| |||||    
T  43130401 ttagggttaaataagtaaatggtctccctaaatatacca-catttgatttcagtccctccaaaattttccttaggcttttggtccctccaaaat 43130309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 35926749 - 35926813
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||||||||||||||||  |||||||||  |||||||||| || |||||||||    
T  35926749 taaatataccaacatttgattttagtctccataaaatattttttaggtttttagttcctctaaaa 35926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 12874682 - 12874769
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||    || ||||||||||||||||||||||| ||| || |||||||| ||||||  |||||||| ||||||||    
T  12874682 gttaaataagtaaatggtttccctaaatataccaacatttgattttggtccctttaaaatatcccttagacttttggtctctctaaaa 12874769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 18560492 - 18560566
Alignment:
Q  113 aaattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttag 189  Q
    ||||||| ||||||||| ||||||  |||  |||||||| ||||||||||||||||||||  |||||||||||||||    
T  18560492 aaattagtgttaaataaataaatggtccc--taaatatatcaacatttgattttagtctccttaaaatattccttag 18560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 35926955 - 35926890
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||||||||||||  |||||||||  ||||||||||| |  |||||||||    
T  35926955 taaatataccaacatttgattttagtctcaataaaatattttttaggtttttgatttctctaaaat 35926890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 40152700 - 40152788
Alignment:
Q  120 agttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||  ||  |||||||||| ||||||| |||||||||   |||||||||||||||| ||||| ||||||| |||||    
T  40152700 agttaaataagtaaatggtcct-ttaaatatacaaacattttattttagtcctcctaaaatattccttagattttttgtccctccaaaat 40152788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 7328551 - 7328464
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   | || ||||||||| ||||||||| ||||||| |  |||||||||| ||||||| ||||||||||||||||    
T  7328551 gttaaataagtaaatagtctccctaaatatactaacatttgactttagtccca-taaaatattctttaggttattggtccctctaaaat 7328464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 32945638 - 32945702
Alignment:
Q  145 aaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||||||||| |  |||||||||  |||| |||||| ||||||||||||    
T  32945638 aaatataccaacatttgattttagtccccataaaatattatttagatttttgatccctctaaaat 32945702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 16126471 - 16126397
Alignment:
Q  123 taaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggt 198  Q
    ||||||||||||||| || | |||||||||||| ||||||||||| || | ||||||||||| |||||||| ||||    
T  16126471 taaataagtaaatgatcctcataaatataccaaaatttgattttaatcgc-ctaaaatattctttaggtttctggt 16126397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 16126218 - 16126308
Alignment:
Q  117 tagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaa 207  Q
    ||||||||||||||||||    |||||||||||||||||||||| |||||||||   ||||| ||||   || |||||| |||||||||||    
T  16126218 tagagttaaataagtaaacagtccccttaaatataccaacatttaattttagtcctcctaaattattatgtacgttttttgtccctctaaa 16126308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 17368922 - 17368860
Alignment:
Q  123 taaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattcc 185  Q
    |||||||||| |||  | |||||||||||||||||||||||||| ||| ||||||||| ||||    
T  17368922 taaataagtatatggtctccttaaatataccaacatttgattttggtccctctaaaattttcc 17368860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 25330562 - 25330636
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggttttt 195  Q
    |||||||||||||||   |||| |||||| | |||||||||||||||||| ||||||||| ||| |||| |||||    
T  25330562 gttaaataagtaaatagtccccctaaatacatcaacatttgattttagtccctctaaaattttctttagattttt 25330636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 16128169 - 16128095
Alignment:
Q  123 taaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggt 198  Q
    ||||||||||||||| || | | |||||||||| ||||||||||| || || |||||||||| |||||||| ||||    
T  16128169 taaataagtaaatgatcctcgtgaatataccaaaatttgattttaatc-ctttaaaatattctttaggtttctggt 16128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 16333154 - 16333228
Alignment:
Q  123 taaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggt 198  Q
    ||||||||||||||| || | |||||||| ||| ||||||||||| || | ||||||||||| |||||||| ||||    
T  16333154 taaataagtaaatgatcctcataaatatatcaaaatttgattttaatcgc-ctaaaatattctttaggtttctggt 16333228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 7328357 - 7328423
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattcct-taggtttttggtccctctaaaat 209  Q
    ||||||||||| |||||||||| |||| ||| ||||||||  | ||||||||| |||||||||||||    
T  7328357 taaatataccatcatttgatttcagtccctccaaaatatttttgtaggtttttagtccctctaaaat 7328423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 16333407 - 16333357
Alignment:
Q  117 tagagttaaataagtaaatgacccccttaaatataccaacatttgatttta 167  Q
    ||||||||||||||||||    |||||||||||||||||||||| ||||||    
T  16333407 tagagttaaataagtaaacagtccccttaaatataccaacatttaatttta 16333357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 30714132 - 30714174
Alignment:
Q  129 agtaaatgacccccttaaatataccaacatttgattttagtct 171  Q
    ||||||||  ||||||||||||| |||||||||||||||||||    
T  30714132 agtaaatggtccccttaaatatatcaacatttgattttagtct 30714174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 39751732 - 39751660
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    |||||||||||||||||| ||| || |||||||||||||||||||| || || |||| || |||||||| |||||    
T  39751732 ttaaataagtaaatgacctcct-aattataccaacatttgattttaatccctataaagta-tccttaggcttttg 39751660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 4921194 - 4921254
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctct 204  Q
    |||||||||||| ||||||||||| |  |  |||||||||||||| | |||||||||||||    
T  4921194 taaatataccaatatttgattttaattcccttaaaatattccttaagcttttggtccctct 4921254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 4921394 - 4921330
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||| ||||||||||||||| || |  |||||||||  |||| ||||| ||||||||||||    
T  4921394 taaatatatcaacatttgattttaatccccttaaaatattttttagattttttgtccctctaaaa 4921330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 26859208 - 26859247
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattc 184  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  26859208 taaatataccaacatttgattttagtc-ccctaaaatattc 26859247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 37897783 - 37897727
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtcc 200  Q
    |||||||||||||||||  ||||||||   |||||||||| |||||| |||||||||    
T  37897783 taaatataccaacattttgttttagtcctcctaaaatatttcttaggcttttggtcc 37897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 3e-25; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 28687456 - 28687550
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||| |||||||| |||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||||| | ||||||||| |||||||    
T  28687456 aattagggttaaatatgtaaatgagccctttaaatataccaacatttaattttaatctctctaaaatattccttatgcttttggtccatctaaaa 28687550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 54164720 - 54164632
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   | || |||||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||    
T  54164720 gttaaataagtaaatagtctccctaaatataccaacatttgattttagtctctataaaatattttttaggttttcggtccctctaaaat 54164632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 53343706 - 53343794
Alignment:
Q  120 agttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||  || ||||||||||||||| |||||||||||||||  ||||||||| |||||||||| ||| ||||||||||    
T  53343706 agttaaataagtaaatggtcctcttaaatataccaacgtttgattttagtctcgttaaaatatttcttaggttttgggt-cctctaaaat 53343794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 32186702 - 32186633
Alignment:
Q  140 cccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||| ||||| |||||||| |||||||||    
T  32186702 cccttaaatataccaacatttaattttagttcctctaaaatattctttaggcttttggtctctctaaaat 32186633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 17430738 - 17430790
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17430738 taaatataccaacatttgattttagtccctctaaaatattccttaggcttttg 17430790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 28687693 - 28687627
Alignment:
Q  143 ttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||| |||||||||||||||||  ||||||||||||  ||||| ||||||||||||||||||    
T  28687693 ttaaatatatcaacatttgattttagttactctaaaatattttttagggttttggtccctctaaaat 28687627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 33752787 - 33752710
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggt 198  Q
    |||||||||||||| |  ||  ||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||    
T  33752787 gttaaataagtaaacggtccttttaaatatatcaacatttgattttagtctccctaaaatattctttaggcttttggt 33752710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 32185280 - 32185369
Alignment:
Q  118 agagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||| |||||||   |||  ||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||| |||||||||    
T  32185280 agagttaaatgagtaaatagtccctctaaatataccaacatttgattttagtccctctaaaa-att-cttaggttgttggtctctctaaaat 32185369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 17431191 - 17431127
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||| |||||||||||||||||| | ||||||||||  ||||| |||||||||||| ||||    
T  17431191 taaatatatcaacatttgattttagtccccctaaaatattttttaggcttttggtccctccaaaa 17431127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 34665005 - 34665069
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||| ||||||||||||||||| |  |||||||||| |||||||||||  ||||||||||    
T  34665005 taaatatactaacatttgattttagtccccttaaaatattctttaggtttttgacccctctaaaa 34665069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 34665210 - 34665148
Alignment:
Q  143 ttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctcta 205  Q
    |||||||||||||||||||||||||||| | ||||||||||  ||||| ||||| ||| ||||    
T  34665210 ttaaatataccaacatttgattttagtcaccctaaaatattttttaggcttttgttccttcta 34665148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 13552916 - 13552828
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   || | |||||||| ||| |||||||||||||| |  |||||||||  ||||| ||||||||| ||||||||    
T  13552916 gttaaataagtaaatagtcctcctaaatatatcaatatttgattttagtccccataaaatattatttaggcttttggtccttctaaaat 13552828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 54164491 - 54164556
Alignment:
Q  144 taaatataccaacatttgattttagtctctc-taaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||||||||| ||| ||||||||   ||||| ||||||||| ||||||||    
T  54164491 taaatataccaacatttgattttagtc-ctcataaaatatattttaggcttttggtccatctaaaat 54164556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 17615602 - 17615679
Alignment:
Q  124 aaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccc 201  Q
    ||||||||||||||||||  ||||||||  || ||||||||||||||   |||||||||  |||||| |||| |||||    
T  17615602 aaataagtaaatgacccctctaaatatatgaatatttgattttagtcctcctaaaatatatcttaggcttttagtccc 17615679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 55173134 - 55173069
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||| |||| |||  |||||||||||||||||| |||||| | ||||| |||||| ||||||    
T  55173134 taaatatatcaacttttcgttttagtctctctaaaattttccttcgatttttagtccctataaaat 55173069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 30941581 - 30941490
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||||||| | | |  ||||||||| ||| ||||||||||||||  ||||||||||  | |||||||  || |||||||||    
T  30941581 ttagagttaaataagtaaataatctctctaaatatactaac-tttgattttagtcttcctaaaatatttatgaggttttatgttcctctaaaa 30941490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 5e-24; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 25905960 - 25906048
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||| | |||| ||||||||||||||||||    
T  25905960 gttaaataagtaaatgatccccttatatataccaacatttgattttagtccccctaaagtatttcataggcttttggtccctctaaaat 25906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 22298020 - 22297928
Alignment:
Q  117 tagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||  |||| ||||||||| ||||||||||||||||| |  |||||||||  ||| ||||||||||||||||||||    
T  22298020 tagagttaaataagtaaatggtccccctaaatatactaacatttgattttagtccccttaaaatattttttaagtttttggtccctctaaaat 22297928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 22297762 - 22297852
Alignment:
Q  119 gagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||   |||  |||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||    
T  22297762 gagttaaataagtaaatagtccctctaaatatatcaacatttgattttagtccctctaaaatattttttaggtttttggtccctttaaaat 22297852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 24490720 - 24490783
Alignment:
Q  146 aatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||    
T  24490720 aatataccaacatttgattttagtctctctaaaatatctcttaagtttttggtccctccaaaat 24490783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 25906216 - 25906125
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaa 207  Q
    |||| ||||||||||||||| | || | |||||||| |||||||||||||||||| | || |||||||| ||||| ||||||||||||||||    
T  25906216 ttagggttaaataagtaaataatcctcctaaatatatcaacatttgattttagtcccccttaaatattctttaggcttttggtccctctaaa 25906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 29673293 - 29673379
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||   ||||||||||  ||||| ||||| |||||||||||    
T  29673293 gttaaataagtaaatggtccccttaaatataccaacatttgattttagtcctcctaaaatatt-tttaggattttgttccctctaaaa 29673379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 17048108 - 17048022
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||||| | |||||| |||  ||||| ||||||| |||||||||    
T  17048108 gttaaataagtgaatgatccccttaaatataccaacatttga-tttagtccccctaaaagattttttaggcttttggttcctctaaaa 17048022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 6843106 - 6843172
Alignment:
Q  143 ttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||| |||||||||||||||||   ||| |||||||||||| |||||||||||||||||||    
T  6843106 ttaaatatacaaacatttgattttagtcctcctagaatattccttagatttttggtccctctaaaat 6843172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 13657552 - 13657638
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||| ||||||  ||| |||||||||| ||||||||||||||||  ||||||||||||| ||||  |||||||| ||||||||    
T  13657552 ttaaataaataaatggtccctttaaatatacaaacatttgattttagttcctctaaaatattctttagacttttggtctctctaaaa 13657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 29673791 - 29673705
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||   ||| ||||||||| ||||||||||||||||  |||||||||||| |||| | |||||||||||| ||||    
T  29673791 ttaaataagtaaatggttcccctaaatatacaaacatttgattttagttcctctaaaatatttcttaaggttttggtccctccaaaa 29673705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 12272527 - 12272579
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  12272527 taaatataccaacatttgattttagtctctctaaaataatttttaggtttttg 12272579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 38298696 - 38298783
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||| |    |||||||| ||| ||||||||| |||| ||||||||||||| |||||||||| ||| ||||||||    
T  38298696 gttaaataagtaaatgatcagtctaaatatatcaatatttgatttaagtccctctaaaatattctttaggttttttgtctctctaaaa 38298783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 2344718 - 2344630
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   || | |||||| |||||||||| ||||||||  |||||| |||||||||||  ||||||||||| ||||||    
T  2344718 gttaaataagtaaatagtcctcctaaatagaccaacattttattttagttcctctaacatattccttagtcttttggtccctttaaaat 2344630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 15773798 - 15773734
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||| |||| |||||||||||||  ||||||||| ||||||| |||||||||||| ||||    
T  15773798 taaatatactaacaattgattttagtcttcctaaaatatcccttaggcttttggtccctccaaaa 15773734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 2846575 - 2846624
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtc 170  Q
    ||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  2846575 gttaaataagtaaatggtccccctaaatatatcaacatttgattttagtc 2846624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 2858412 - 2858461
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtc 170  Q
    ||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  2858412 gttaaataagtaaatggtccccctaaatatatcaacatttgattttagtc 2858461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 38299178 - 38299117
Alignment:
Q  141 ccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    ||||||||||||||| ||| |||||||||  ||||||||| ||| ||||| |||||||||||    
T  38299178 ccttaaatataccaatattcgattttagttcctctaaaattttctttaggcttttggtccct 38299117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 20510337 - 20510420
Alignment:
Q  118 agagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    |||||||||| || |||||| ||||| |||||||  ||||||||||||||||| |   ||||||||| |||||||||| ||||||    
T  20510337 agagttaaatcagaaaatgatcccct-aaatatattaacatttgattttagtcccctaaaaatattctttaggtttttagtccct 20510420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 13657803 - 13657716
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||   || || |||||||| |||||||||||||||| |  ||||||||||  || || ||||| |||||||||||    
T  13657803 gttaaataagtaaatagtcctctgaaatatactaacatttgattttagttttcctaaaatattattttggcttttgttccctctaaaa 13657716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 17047880 - 17047945
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||||||||||| |   ||||||||||| |||   ||||||||||||||||||    
T  17047880 taaatataccaatatttgattttagccctcctaaaatattctttaaacttttggtccctctaaaat 17047945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 5161160 - 5161081
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    |||| |||||||||||||||||    ||||||||||  |||||||||||||| || | ||||||||||  |||||||||||    
T  5161160 ttagggttaaataagtaaatgattttcttaaatatattaacatttgattttactc-ccctaaaatattatttaggtttttg 5161081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 5e-24; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 2928088 - 2928184
Alignment:
Q  113 aaattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| |||||||||||||||||||  || | ||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||| |||||    
T  2928088 aaatcagagttaaataagtaaatggtcctcctaaatataccaacatttgattctagtccctctaaaattttccttaggcttttggtccctccaaaat 2928184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 30430272 - 30430360
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||    
T  30430272 gttaaataagtaaatggtccctctaaatataccaacatttgattttagttcctctaaaatattctttaggcttttggtccctctaaaat 30430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 4304401 - 4304325
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttgg 197  Q
    ||||||||||||||| | | || ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  4304401 gttaaataagtaaataatctccctaaatataccaacatttgattttagtccctctaaaatattcattagatttttgg 4304325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 4304140 - 4304233
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| ||||||||| |||||   ||||||||||||||||||||||||||||||||   |||||||||| |||| | ||||||||| ||||||||    
T  4304140 ttagggttaaataaataaatcgtccccttaaatataccaacatttgattttagtcctcctaaaatatttcttaagcttttggtccttctaaaat 4304233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 30172073 - 30172150
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggt 198  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||||||| |  |||||||||| |||||||||||||    
T  30172073 gttaaataagtaaatggtccccctaaatatatcaacatttgattttagtccccttaaaatattctttaggtttttggt 30172150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 6931194 - 6931106
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   || ||||||||||| ||||||||||||||||| || ||||| ||| |||||||||||| || |||||||||    
T  6931194 gttaaataagtaaatagtcctcttaaatatactaacatttgattttagtccctttaaaacatttcttaggtttttgatctctctaaaat 6931106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 28725767 - 28725678
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatata---ccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||  |||| ||||||||   ||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||    
T  28725767 gttaaataagtaaatggtccccctaaatataataccaacatttgattttagtctccc-aaaatattcattaggtttttggtccctccaaaa 28725678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 25799575 - 25799513
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattc 184  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||    
T  25799575 gttaaataagtaaatgactccct-aaatataccaacatttaattttagtctctttaaaatattc 25799513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 44094391 - 44094309
Alignment:
Q  126 ataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||   |||||||| |||||| |||||||||||| ||||    
T  44094391 ataagcaaatggtccccttaaatatatcaacatttgattttagtctcctgaaaatatttcttagggttttggtccctccaaaa 44094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 45405136 - 45405066
Alignment:
Q  139 ccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||| ||||| |||| ||||||| |||||    
T  45405136 ccccttaaatatactaacatttgattttagtccccctaaaatattctttaggcttttagtccctccaaaat 45405066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 45404826 - 45404887
Alignment:
Q  148 tataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||    
T  45404826 tatacaaacatttgattttagtctccctaaaatattccttagatttctggtccctccaaaat 45404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 8896121 - 8896034
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||| ||| |  |||||||| |||||||||| ||||||||||| ||||||||||| ||| | |||||||| || |||||    
T  8896121 gttaaataagtaagtgatcatcttaaatacaccaacatttaattttagtctccctaaaatattctttaagcttttggtctctttaaaa 8896034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 41993229 - 41993143
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||| || | | ||||||||| ||| ||||||||||| |||| ||||||||||  ||||| ||||| |||||||||||    
T  41993229 ttaaataagtaaacgatcacattaaatatatcaatatttgattttaatctccctaaaatattttttaggcttttgatccctctaaaa 41993143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 43907972 - 43907899
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggttttt 195  Q
    ||||||||||||||||| ||| |||||||||| || |||||||||||||| | ||||||||||  ||||||||||    
T  43907972 gttaaataagtaaatgatccc-ttaaatatactaatatttgattttagtccccctaaaatattttttaggttttt 43907899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 30173683 - 30173618
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||||||||||||| | ||||||| ||| ||||| ||||| ||||||||||||    
T  30173683 taaatataccaatatttgattttagtccccctaaaattttctttaggcttttgatccctctaaaat 30173618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 32619017 - 32618952
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||| ||||||||||||||||||| |||||||||||  |||| ||||| || ||||||||||    
T  32619017 taaatatatcaacatttgattttagtctttctaaaatattttttagatttttagttcctctaaaat 32618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 34502627 - 34502692
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||| |||||||||||||||||| || |||||||||  ||||| |||| |||||||||||||    
T  34502627 taaatatatcaacatttgattttagtccctataaaatattttttaggcttttcgtccctctaaaat 34502692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44094176 - 44094242
Alignment:
Q  144 taaatataccaa-catttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||||||||||| ||  ||||||||||| |||||| ||||||||||| ||||||    
T  44094176 taaatataccaaacatttgattttaatccttctaaaatatttcttaggcttttggtccctttaaaat 44094242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 4475334 - 4475269
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||| ||||||||||||||| || || |||||| ||| ||||||||||| ||| ||||||||    
T  4475334 taaatatatcaacatttgattttaatcactttaaaattttctttaggtttttgatccttctaaaat 4475269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 27614039 - 27614084
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttag 189  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||    
T  27614039 taaatataccaacatttaattttagtctccataaaatattctttag 27614084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 13340442 - 13340533
Alignment:
Q  118 agagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||||| |||||    
T  13340442 agagttaaataagtaaatagtccccttaaatataccaacatttgattttagtccctataaaacattctttaggcttttggtccctccaaaat 13340533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 31298726 - 31298814
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||| | | ||||| |||||||||||| |||||| || |||||||||||| |||||| ||||||||||||||||||    
T  31298726 gttaaataagtaaatgatctctttaaaaataccaacatttaattttaatccctctaaaatatttcttaggcttttggtccctctaaaat 31298814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 13340679 - 13340610
Alignment:
Q  139 ccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||||||    
T  13340679 ccccttaaatatactaacatttgattttagtccccataaaatattctttaggtttttggtccctctaaaa 13340610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 31298978 - 31298892
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaa 207  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||  ||||||||||||| ||||| ||||| ||||||||||    
T  31298978 gttaaataagtaaatagtccctttaaatataccaatatttgattttagttcctctaaaatattctttaggcttttgctccctctaaa 31298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 30519705 - 30519770
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||| ||||||||||||||||||||    
T  30519705 taaatataccaacatttgattttaatctctttaaaatattatttaagtttttggtccctctaaaat 30519770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 34637683 - 34637590
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| |||||||||||||||   | || |||||||| |||||||||||||||||  | ||||||||||| | ||||||||||||||||||||||    
T  34637683 ttagggttaaataagtaaatagtcaccctaaatatatcaacatttgattttagttcccctaaaatattcttgaggtttttggtccctctaaaat 34637590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 6190566 - 6190648
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtc 199  Q
    |||| ||||| ||||||||||| | || |||||||| |||||||||||||||||||| || ||||||| |||||||||||||||    
T  6190566 ttagggttaactaagtaaatgatctccctaaatatatcaacatttgattttagtctc-cttaaatatttcttaggtttttggtc 6190648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 12289982 - 12290063
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    |||||||||||||||   | || ||||||||||||||||||||||||| ||  |||||||||||| |||||||||| |||||    
T  12289982 gttaaataagtaaatagtctccctaaatataccaacatttgattttagcctgcctaaaatattccctaggtttttgatccct 12290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 24704332 - 24704397
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||| | ||||||||||||||||||    
T  24704332 taaatataccaatatttgattttagtctccctaaaatattatttatgcttttggtccctctaaaat 24704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 12290227 - 12290136
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||  |||||||| | | |||  | ||||||||||| |||||    
T  12290227 ttagggttaaataagtaaatgatcccct-aaatataccaacatttaattttagttcctctaaaacaattctttcgcttttggtccctttaaaa 12290136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 14365157 - 14365097
Alignment:
Q  146 aatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaa 206  Q
    |||||| ||||||||||||||||||  ||||||||||| |||||  |||||||||||||||    
T  14365157 aatatatcaacatttgattttagtccatctaaaatatttcttagaattttggtccctctaa 14365097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 34637427 - 34637513
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| | ||||||||||| | ||  ||||||||||| |||||    
T  34637427 gttaaataagtaaatagtctccataaatataccaacatttgattttagtc-ccctaaaatattcttgagacttttggtccctttaaaa 34637513  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 10284449 - 10284371
Alignment:
Q  128 aagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaa 206  Q
    |||||||||| ||||||||||| |  |||||||||||||| ||||  ||||||||||  |||||| ||||||| |||||    
T  10284449 aagtaaatgatccccttaaatacagtaacatttgattttaatctccttaaaatattctataggttgttggtccttctaa 10284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 19045118 - 19045071
Alignment:
Q  147 atataccaacatttgattttagtctctctaaaatattccttaggtttt 194  Q
    ||||||||||||||||||||||||  ||||||||||| |||| |||||    
T  19045118 atataccaacatttgattttagtccttctaaaatatttcttatgtttt 19045071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 24704831 - 24704748
Alignment:
Q  124 aaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||| ||||  |||||||| ||| |||||||||||||  | ||||||||||| |||  ||||| ||||||| |||||    
T  24704831 aaataagtaaatggcccc--taaatatatcaatatttgattttagttcccctaaaatattctttaaatttttagtccctccaaaat 24704748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 7359650 - 7359593
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccc 201  Q
    |||||||||||||||||||||||| || | ||||||||||  ||||| ||||| ||||    
T  7359650 taaatataccaacatttgattttactccccctaaaatattatttaggcttttgatccc 7359593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 33599907 - 33599847
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctct 204  Q
    ||||||||||||| |||  |||||||||||||||||| ||||||    |||||||||||||    
T  33599907 taaatataccaacttttcgttttagtctctctaaaattttccttcaacttttggtccctct 33599847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 33892290 - 33892202
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||  | |  ||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||    
T  33892290 gttaaataagtaaacaatcttcttaaatataccaacatttgattttagtccctttaaaatattctttatgtttttggtccctctaaaat 33892202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 31212315 - 31212402
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||   ||||||||||||| |||||||||||||||||| |  |||||||||| ||||| |||||||||||||||||    
T  31212315 gttaaataagtaaatagtccccttaaatatatcaacatttgattttagtccccataaaatattctttaggcttttggtccctctaaaa 31212402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 9861570 - 9861658
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   || | |||||||| |||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||    
T  9861570 gttaaataagtaaatagtcctcctaaatatatcaacatttgattttagtccctataaaatattctttaggcttttggtccctctaaaat 9861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 36874336 - 36874399
Alignment:
Q  145 aaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  36874336 aaatatgccaacatttaattttagttcctctaaaatattccttaggtttttggtccctctaaaa 36874399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 31212538 - 31212450
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   | || ||||||||||||||||||||||||||| |  |||||||||| ||||||||||| | ||||||||||    
T  31212538 gttaaataagtaaatagtctccctaaatataccaacatttgattttagtccccataaaatattctttaggtttttgtttcctctaaaat 31212450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 33892033 - 33892125
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||| |||||||||||||||    | ||||||||||||||||||||||||||||| |   ||||||||| ||||||||||||||| |||||||    
T  33892033 ttagggttaaataagtaaatagttctcttaaatataccaacatttgattttagtcccctcaaaatattctttaggtttttggtccttctaaaa 33892125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 6906530 - 6906440
Alignment:
Q  118 agagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||| |  |||| ||||||||||||||||||||||||||| |  |||||||||  ||||| ||||| |||||| ||||    
T  6906530 agagttaaataagtaaacggtccccctaaatataccaacatttgattttagtccccataaaatattttttaggcttttgatccctccaaaa 6906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 15229613 - 15229706
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| |||||||||||||||    ||||||||||||||||||||| ||||||||| || |||||||||| || |  ||||| ||||||||||||    
T  15229613 ttagggttaaataagtaaatagttcccttaaatataccaacattttattttagtccctataaaatattcttttgacttttgatccctctaaaat 15229706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 6906266 - 6906353
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   |||| ||||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||| || |||||    
T  6906266 gttaaataagtaaatagtccccctaaatataccaacatttga-tttagtccccataaaatattccttaggcttttggtccttccaaaat 6906353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 20691276 - 20691343
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttag 189  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| || | ||||||||||||||||    
T  20691276 gttaaataagtaaatggcccc-ttaaatataccaaaatttgattttattccccctaaaatattccttag 20691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 27503744 - 27503656
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||  | |||||||||| ||| ||||||||||||| ||  |||||||||  ||||| ||||||||||||| ||||    
T  27503744 gttaaataagtaaatgattcacttaaatatatcaatatttgattttagtttccataaaatattatttaggcttttggtccctctgaaat 27503656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 29242461 - 29242520
Alignment:
Q  149 ataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||| ||||||||| ||||||||||||| ||||| ||||||| |||||||||    
T  29242461 ataccaacattttattttagtccctctaaaatattcattaggcttttggttcctctaaaa 29242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 29242925 - 29242839
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||   ||||| |||| || |||||||||||||||||| |||||||| ||| |||||||||| |||||||| ||||    
T  29242925 gttaaataagtaaattgtcccctaaaat-tatcaacatttgattttagtccctctaaaaaatttcttaggttttcggtccctccaaaa 29242839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 37037334 - 37037276
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||   |||||||||||    
T  37037334 taaatattccaacatttgattttagtccctctaaaatattccttatacttttggtccct 37037276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 8791735 - 8791800
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||| ||||||||||||||| || | | ||||||||  ||||||||||||||||||||||||    
T  8791735 taaatatatcaacatttgattttactcaccccaaaatatttgttaggtttttggtccctctaaaat 8791800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 14148391 - 14148472
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggttttt 195  Q
    |||||| ||| ||||||||| ||  |||| |||||||| ||||||||||||||||||   |||||||||| |||||||||||    
T  14148391 aattagggtttaataagtaagtggtccccctaaatatatcaacatttgattttagtcctcctaaaatatttcttaggttttt 14148472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 10069853 - 10069941
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||| |||||||||||  |||  ||||| ||||||||||| ||||||  | ||||||||||||| ||||| ||||||||| ||||||||    
T  10069853 gttacataagtaaatgttcccactaaatgtaccaacatttaattttaacccctctaaaatattctttaggattttggtccttctaaaat 10069941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 39484809 - 39484723
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    ||||||||||||||||   ||| |||||||| ||||||||  ||||| |||| |||||||||| |||||| |||||||||||| ||||    
T  39484809 gttaaataagtaaatggttcccctaaatatatcaacatttt-ttttaatctccctaaaatatttcttaggattttggtccctccaaaa 39484723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 5879872 - 5879961
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaa 206  Q
    |||| |||||||||||||||   | || ||||||||| || ||||||||||||||| ||||||||||| |||| |  ||||||||||||||    
T  5879872 ttagggttaaataagtaaatagtctccctaaatatactaatatttgattttagtctttctaaaatatttcttaag-ctttggtccctctaa 5879961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 14148937 - 14148860
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtcc 200  Q
    |||||||| ||||||| ||  |||||||||||||||||||||||||||| | |||| |||||  ||||| |||||||||    
T  14148937 ttaaataactaaatgatcct-ttaaatataccaacatttgattttagtccccctaacatattttttaggcttttggtcc 14148860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 10070090 - 10070025
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||| |||| |||||| ||   ||||||||||  ||||||||||||||||||||||||    
T  10070090 taaatataccaatattttattttaatcctcctaaaatattttttaggtttttggtccctctaaaat 10070025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 7766421 - 7766359
Alignment:
Q  138 cccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtcc 200  Q
    ||||| ||||||||| ||||||| ||||||||| | ||| |||||||||||| ||||| ||||    
T  7766421 cccccctaaatatactaacattttattttagtccccctataatattccttagattttttgtcc 7766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 8791966 - 8791877
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctc-taaaatattccttaggtttttggtccctcta 205  Q
    |||| |||||||||||||||    | ||||||||||| |||||||||||||| || ||| ||||||||| |||||||||||  ||||||||    
T  8791966 ttagggttaaataagtaaatagttctcttaaatatactaacatttgattttaatc-ctcataaaatatttcttaggttttttatccctcta 8791877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 5880094 - 5880030
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||| |||||||||||||||| |||  | ||||||||||||||| ||||| || |||| ||||    
T  5880094 taaataaaccaacatttgatttttgtccttttaaaatattccttagattttttgttcctcaaaaa 5880030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 20164621 - 20164709
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||  | |||||| ||||||| |||||||||||||| |||||    
T  20164621 gttaaataagtaaatggtcccctaaaatataccaacatttgattttagtcattttaaaattttccttaagtttttggtccctccaaaat 20164709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 29635237 - 29635324
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  29635237 gttaaataagtaaatggtccccctaaatatatcaacatttgattttagtc-ccctaaaatattccttagacttttggtccctctaaaat 29635324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 31172428 - 31172342
Alignment:
Q  122 ttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||| ||   ||||||||||  |||||||||||||||||||||||    
T  31172428 ttaaataagtaaatgatccctttaaatatacaaacatttgattttaatcctcctaaaatattttttaggtttttggtccctctaaaa 31172342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 20165072 - 20165011
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctcta 205  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  20165072 taaatataccaacatttgattttagtccctctaaaatattcattaggtttttgatccctcta 20165011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 12821181 - 12821269
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||| || | ||||||||||  ||||| ||||||| ||||||||||    
T  12821181 gttaaataagtaaatggtccccttaaatataccaacgtttgattttaatccccctaaaatattttttaggcttttggttcctctaaaat 12821269  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 23797275 - 23797211
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  23797275 taaatatatcaacatttgattttagtccctctaaaatatttcttagatttttggtccctctaaaa 23797211  T

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Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 37081347 - 37081260
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   ||||| ||||||| |||| ||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  37081347 gttaaataagtaaatattcccct-aaatatatcaacgtttgattttagtcccccaaaaatattccttaggtttttggtccctctaaaat 37081260  T

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Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 3555362 - 3555448
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctc 203  Q
    |||| |||||||||| |||||  |||| ||||||||||||||||||||||||||| | |||||||||| |||||| ||||||||||||    
T  3555362 ttagggttaaataagcaaatggtccccctaaatataccaacatttgattttagtccccctaaaatatttcttagg-ttttggtccctc 3555448  T

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Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 7760859 - 7760764
Alignment:
Q  113 aaattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaa 208  Q
    |||||||  ||||||||||||||    ||| ||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||| ||||    
T  7760859 aaattaggattaaataagtaaatagttcccctaaatataccaacatttgattttagtccctataaaatatttcttaggcttttggtccctccaaaa 7760764  T

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Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 19105515 - 19105420
Alignment:
Q  114 aattagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||| |||||||||||||||   |||| ||||||||||||| ||||||||||||| |  |||| ||||| ||||| ||||||||||||||||||    
T  19105515 aattagggttaaataagtaaatagtccccctaaatataccaacttttgattttagtccccttaaactattctttaggcttttggtccctctaaaat 19105420  T

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Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 19105258 - 19105341
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctcta 205  Q
    |||||||||||||| || || | ||||||||| |||||| |||||||||| ||||||||||||| ||||| ||||||||||||||    
T  19105258 gttaaataagtaaaagatccgcataaatatactaacattcgattttagtc-ctctaaaatattctttaggcttttggtccctcta 19105341  T

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Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 31198323 - 31198388
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||||||||||||  |||||||||||  ||||||| ||| ||||||||||||    
T  31198323 taaatataccaacatttgattttagtccttctaaaatattttttaggttattgatccctctaaaat 31198388  T

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Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 31198551 - 31198464
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttag-tctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| |||||||||||    
T  31198551 gttaaataagtaaatagtccctttaaatataccaacatttgattttagttctc-ctaaaatatttcttaggcttttgg-ccctctaaaat 31198464  T

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Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 7760610 - 7760698
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||| | ||   ||||||||||| ||| ||||||||||| | ||||||||||| ||||| |||||||||||| |||||    
T  7760610 gttaaataagtaaataatccttctaaatataccagcatatgattttagtccccctaaaatattctttaggcttttggtccctccaaaat 7760698  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 6036545 - 6036638
Alignment:
Q  116 ttagagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||||||    ||| |||||||| |||||||||||||||||| |  ||||||| |  |||||||||||| | |||||||||    
T  6036545 ttagagttaaataagtaaatagttcccctaaatatatcaacatttgattttagtccccttaaaatagtttttaggtttttggcctctctaaaat 6036638  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 15329877 - 15329939
Alignment:
Q  139 ccccttaaatataccaacatttgattttagtctctctaaaatattcctt-aggtttttggtcc 200  Q
    |||||||||||||||||||||||||||||||| | | || ||||| ||| |||||||||||||    
T  15329877 ccccttaaatataccaacatttgattttagtcccccaaagatattacttaaggtttttggtcc 15329939  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 21657555 - 21657465
Alignment:
Q  119 gagttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||||   | || ||||||||| |||||||||| |||| | |  |||||||||||||| | ||||| ||||||||||||    
T  21657555 gagttaaataagtaaatagtctccctaaatatactaacatttgatattagcccccttaaaatattccttacgcttttgatccctctaaaat 21657465  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 8129881 - 8129968
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||||| ||  | ||||||||| ||| |  ||||||| ||||||||||    
T  8129881 gttaaataagtaaatgatctcct-aaatctaccaacatttgattttaatccttttaaaatatttctttgacttttggttcctctaaaat 8129968  T

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Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 9686539 - 9686451
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    |||||||||||||||   || | |||||||| ||| |||||||||||||| |  |||||||||  ||||| ||||||||| ||||||||    
T  9686539 gttaaataagtaaatagtcctcctaaatatatcaatatttgattttagtccccataaaatattatttaggcttttggtccttctaaaat 9686451  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 18881142 - 18881190
Alignment:
Q  147 atataccaacatttgattttagtctctctaaaatattccttaggttttt 195  Q
    |||||||||||||||||||||||  || |||||||||| ||||||||||    
T  18881142 atataccaacatttgattttagttcctttaaaatattctttaggttttt 18881190  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 47741111 - 47741036
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttg 196  Q
    ||||| ||||||||||  |||| ||||||||||||||||| |||| |||| | | |||||||| |||||| |||||    
T  47741111 gttaattaagtaaatggtccccataaatataccaacatttaatttcagtcccccaaaaatatttcttaggcttttg 47741036  T

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Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 11684 - 11623
Alignment:
Q  143 ttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctct 204  Q
    |||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  11684 ttaaatatacgaatatttgattttagtcactctaaaatatttcttaggtttttggtccctct 11623  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 6294 - 6354
Alignment:
Q  142 cttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccct 202  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||    
T  6294 cttaaatataccaacatttgatttcaatctttctaaaatattctttagggttttggtccct 6354  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 175592 - 175527
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||  ||||| |||||| ||||||    
T  175592 taaatataccaactttttattttagtctctctaaaattttccttaaatttttagtccctataaaat 175527  T

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Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 30313 - 30392
Alignment:
Q  121 gttaaataagtaaatgacccccttaaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtcc 200  Q
    ||||||||||| ||||  |||| ||||||||| |||||||||||||||||||   |||||||| |||| | |||||||||    
T  30313 gttaaataagtgaatggtccccataaatatactaacatttgattttagtctcctaaaaatattacttaagcttttggtcc 30392  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 64056 - 63991
Alignment:
Q  144 taaatataccaacatttgattttagtctctctaaaatattccttaggtttttggtccctctaaaat 209  Q
    ||||||||||||||||| ||||||||  | ||||||||||  |||||||||| |||||||| ||||    
T  64056 taaatataccaacatttaattttagttcccctaaaatattatttaggtttttagtccctctcaaat 63991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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